View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5803_high_29 (Length: 243)
Name: NF5803_high_29
Description: NF5803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5803_high_29 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 32950234 - 32950005
Alignment:
| Q |
1 |
actttttggtgtgaattgagtatcatttgcactcaactatagagacaaatgagtaaggtttttaatagatgacaaaactctcgttgagttgggtaggact |
100 |
Q |
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| T |
32950234 |
actttttggtgtgaattgagtatcatttgcactcaactatagagacaaatgagtaaggcttttaatagatgacaaaactctcgttgagttgggtaggact |
32950135 |
T |
|
| Q |
101 |
gcaattttagtcggggatcaaattcagattcttttgattgatttgtcgttaactgaagttcattaatcacgtgaatccaattgttacattgcaaaatgca |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32950134 |
gcaattttagtcggggatcaaattcagattctcttgattgatttgtcgttaactgaagttcattaatcacgtgaatccaattgttacattgcaaaatgca |
32950035 |
T |
|
| Q |
201 |
aataatgacattacccctggaaacctttat |
230 |
Q |
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||||||||||||||| |||||||||||||| |
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| T |
32950034 |
aataatgacattaccactggaaacctttat |
32950005 |
T |
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