View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5803_high_6 (Length: 492)
Name: NF5803_high_6
Description: NF5803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5803_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 48 - 478
Target Start/End: Original strand, 34356421 - 34356855
Alignment:
| Q |
48 |
ggtcaagagattttatagactttttctaagcttaaaatgcacaaatgaatgtttctttggattcatacataactcaacctatcaatcattttctttagac |
147 |
Q |
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| T |
34356421 |
ggtcaagagattttgtagactttttctaagcttaaaatgcacaaatgaatgtttctttggattcatacataactcaacctatcaatcattttctttagac |
34356520 |
T |
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| Q |
148 |
ctacttaatatttagcaaatacatgcttatttcatactaatataaactgtannnnnnnnaaaactcgatatctaatttaaggaccgactaa-ttcaaggg |
246 |
Q |
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| T |
34356521 |
ctacttaatatttagaaaacacatgcttatttcatactaatataaactgtattttttttaaaactcggtatctgatttaaggaccgattaatttgagggg |
34356620 |
T |
|
| Q |
247 |
acctactttatattatatactaatataaaccgtttaa-tttagattaaacgctcaagatttctaacttcataaatttgtgaccgtctt--nnnnnnnnnt |
343 |
Q |
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| T |
34356621 |
acttactttatattatatactaatataaaccgtttaattttagattaaacgttcaacatttctaacttcataaatttgtgaccctcttaaaaaaataaat |
34356720 |
T |
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| Q |
344 |
tgtgaccaagtgatatcaactataggtgcatgtgggttgatattttcaaagaaaataatataagtacttttttgtagccnnnnnnntataagtacttttt |
443 |
Q |
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| T |
34356721 |
tgtgaccaagtgatatcaactataggtgcatttgggttgatattttcaaagaaaataatataagtacttttttgtagccaaaaaaatataagtacttttt |
34356820 |
T |
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| Q |
444 |
tcattgatcttgaagagatctcattgttgactgat |
478 |
Q |
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| T |
34356821 |
tcattgatcttgaagagatctcattgttgactgat |
34356855 |
T |
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