View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5803_low_17 (Length: 327)

Name: NF5803_low_17
Description: NF5803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5803_low_17
NF5803_low_17
[»] chr6 (28 HSPs)
chr6 (77-310)||(10730102-10730339)
chr6 (223-307)||(32165272-32165359)
chr6 (229-289)||(6632664-6632728)
chr6 (208-289)||(21610045-21610130)
chr6 (117-188)||(7576795-7576866)
chr6 (223-306)||(29052321-29052408)
chr6 (117-171)||(32675823-32675877)
chr6 (220-274)||(34413343-34413397)
chr6 (117-185)||(11795594-11795663)
chr6 (131-188)||(21609997-21610054)
chr6 (117-186)||(21871218-21871287)
chr6 (119-171)||(2040117-2040169)
chr6 (209-285)||(18078243-18078319)
chr6 (117-168)||(6752913-6752964)
chr6 (131-185)||(10755231-10755285)
chr6 (117-171)||(23239345-23239399)
chr6 (230-289)||(32615433-32615495)
chr6 (117-171)||(35071362-35071416)
chr6 (117-182)||(2027110-2027175)
chr6 (229-303)||(2034246-2034324)
chr6 (231-289)||(17914951-17915012)
chr6 (117-154)||(23239238-23239275)
chr6 (149-185)||(3829885-3829921)
chr6 (223-271)||(4808599-4808646)
chr6 (222-303)||(10054373-10054457)
chr6 (117-185)||(10184264-10184332)
chr6 (223-283)||(10184341-10184400)
chr6 (221-290)||(22816594-22816667)
[»] chr5 (39 HSPs)
chr5 (208-307)||(29659049-29659150)
chr5 (208-289)||(43319008-43319093)
chr5 (223-307)||(28357339-28357427)
chr5 (220-292)||(6025993-6026068)
chr5 (209-307)||(38461279-38461381)
chr5 (223-283)||(15122560-15122619)
chr5 (208-289)||(29418748-29418833)
chr5 (229-289)||(23087796-23087858)
chr5 (131-185)||(9477420-9477474)
chr5 (131-185)||(29418700-29418754)
chr5 (117-171)||(29659158-29659212)
chr5 (117-166)||(40697109-40697158)
chr5 (140-189)||(43319083-43319132)
chr5 (231-292)||(780587-780651)
chr5 (208-289)||(4728851-4728934)
chr5 (231-283)||(5203453-5203504)
chr5 (137-185)||(6025939-6025987)
chr5 (117-181)||(6125374-6125438)
chr5 (116-184)||(15364086-15364154)
chr5 (117-165)||(28625584-28625632)
chr5 (116-167)||(13739331-13739382)
chr5 (130-185)||(28357436-28357491)
chr5 (117-151)||(1371930-1371964)
chr5 (139-185)||(7565220-7565266)
chr5 (240-274)||(9477328-9477362)
chr5 (223-290)||(16722031-16722101)
chr5 (218-289)||(17668405-17668479)
chr5 (116-166)||(29922122-29922172)
chr5 (226-289)||(33757093-33757159)
chr5 (120-185)||(5559856-5559921)
chr5 (117-185)||(12467349-12467420)
chr5 (223-289)||(12987025-12987095)
chr5 (117-166)||(22201865-22201914)
chr5 (129-166)||(42478929-42478966)
chr5 (228-289)||(10537235-10537300)
chr5 (117-185)||(15167648-15167716)
chr5 (117-185)||(24030298-24030366)
chr5 (117-161)||(26003105-26003149)
chr5 (223-292)||(29922200-29922273)
[»] chr3 (31 HSPs)
chr3 (205-289)||(10448779-10448867)
chr3 (231-307)||(38524075-38524155)
chr3 (208-307)||(43376684-43376785)
chr3 (130-188)||(53787699-53787757)
chr3 (209-283)||(53787749-53787823)
chr3 (130-189)||(10449057-10449116)
chr3 (131-185)||(7124643-7124697)
chr3 (208-289)||(28741210-28741295)
chr3 (223-283)||(29614209-29614268)
chr3 (117-184)||(36266316-36266383)
chr3 (226-283)||(3645318-3645374)
chr3 (117-166)||(3876197-3876246)
chr3 (226-283)||(20894518-20894574)
chr3 (136-185)||(22809146-22809195)
chr3 (117-166)||(40240511-40240560)
chr3 (117-185)||(33946484-33946552)
chr3 (223-271)||(37243493-37243541)
chr3 (220-283)||(37456442-37456504)
chr3 (229-271)||(4974338-4974380)
chr3 (229-283)||(30473160-30473214)
chr3 (117-171)||(34707647-34707701)
chr3 (228-274)||(34707729-34707775)
chr3 (119-185)||(40581012-40581078)
chr3 (121-171)||(46573392-46573442)
chr3 (231-289)||(4257321-4257382)
chr3 (116-185)||(42381193-42381262)
chr3 (136-185)||(52895358-52895407)
chr3 (223-283)||(2086702-2086762)
chr3 (231-283)||(30917513-30917565)
chr3 (117-185)||(38524172-38524240)
chr3 (129-185)||(42956125-42956181)
[»] chr8 (38 HSPs)
chr8 (214-307)||(28280696-28280793)
chr8 (129-189)||(14724911-14724971)
chr8 (220-281)||(23412751-23412812)
chr8 (117-182)||(28280796-28280861)
chr8 (208-307)||(14724961-14725063)
chr8 (208-272)||(24866947-24867011)
chr8 (117-188)||(24350453-24350524)
chr8 (220-283)||(43577236-43577299)
chr8 (118-188)||(2019575-2019645)
chr8 (229-283)||(2563373-2563427)
chr8 (220-307)||(31079174-31079265)
chr8 (226-283)||(37410927-37410983)
chr8 (223-289)||(42363328-42363397)
chr8 (117-185)||(10213779-10213847)
chr8 (223-283)||(12607095-12607154)
chr8 (129-185)||(14262410-14262466)
chr8 (220-289)||(19327872-19327944)
chr8 (117-185)||(25465781-25465849)
chr8 (229-310)||(28879042-28879127)
chr8 (130-166)||(31079113-31079149)
chr8 (117-185)||(32975771-32975839)
chr8 (137-185)||(38195570-38195618)
chr8 (232-283)||(218273-218323)
chr8 (232-283)||(694833-694883)
chr8 (232-283)||(699042-699092)
chr8 (232-283)||(731896-731946)
chr8 (232-283)||(855792-855842)
chr8 (117-172)||(28879152-28879207)
chr8 (223-274)||(35168452-35168503)
chr8 (116-171)||(37966118-37966173)
chr8 (223-290)||(11988201-11988271)
chr8 (117-171)||(24866885-24866939)
chr8 (223-310)||(35453394-35453485)
chr8 (230-289)||(42102112-42102174)
chr8 (117-185)||(19925322-19925391)
chr8 (223-289)||(38195492-38195561)
chr8 (208-283)||(32751153-32751228)
chr8 (117-185)||(37410847-37410915)
[»] chr7 (39 HSPs)
chr7 (223-307)||(43818890-43818976)
chr7 (208-289)||(22032767-22032852)
chr7 (208-271)||(47654410-47654473)
chr7 (208-307)||(9024752-9024855)
chr7 (223-289)||(14675971-14676040)
chr7 (223-283)||(16958831-16958890)
chr7 (223-283)||(19913960-19914020)
chr7 (117-185)||(44613407-44613475)
chr7 (117-185)||(47654348-47654416)
chr7 (117-171)||(43818812-43818866)
chr7 (131-180)||(9534030-9534079)
chr7 (230-283)||(16932948-16933000)
chr7 (230-283)||(16938331-16938383)
chr7 (117-166)||(25908397-25908446)
chr7 (116-185)||(29378729-29378798)
chr7 (117-185)||(22032846-22032914)
chr7 (117-165)||(39279534-39279582)
chr7 (225-284)||(21027526-21027585)
chr7 (117-168)||(25655666-25655717)
chr7 (229-289)||(35809095-35809159)
chr7 (223-303)||(47511034-47511118)
chr7 (220-302)||(47862714-47862799)
chr7 (208-274)||(14691295-14691361)
chr7 (117-167)||(26331867-26331917)
chr7 (230-289)||(28004589-28004651)
chr7 (117-171)||(29390485-29390539)
chr7 (117-171)||(33204932-33204986)
chr7 (230-289)||(35246677-35246739)
chr7 (117-154)||(6406801-6406838)
chr7 (220-249)||(12473402-12473431)
chr7 (117-166)||(20888677-20888726)
chr7 (223-289)||(22575591-22575661)
chr7 (231-284)||(23137182-23137234)
chr7 (117-166)||(33288009-33288058)
chr7 (131-163)||(15819490-15819522)
chr7 (235-283)||(25536293-25536340)
chr7 (130-166)||(30094676-30094712)
chr7 (223-267)||(48949752-48949795)
chr7 (131-171)||(49104316-49104356)
[»] chr4 (44 HSPs)
chr4 (223-307)||(26206365-26206453)
chr4 (205-303)||(7148763-7148865)
chr4 (117-188)||(48721901-48721972)
chr4 (223-310)||(2141625-2141716)
chr4 (116-169)||(4331430-4331483)
chr4 (223-289)||(4603343-4603412)
chr4 (223-289)||(46175990-46176059)
chr4 (223-283)||(15184562-15184621)
chr4 (117-185)||(17222913-17222981)
chr4 (223-310)||(52274131-52274222)
chr4 (231-268)||(4398225-4398262)
chr4 (116-185)||(14987533-14987602)
chr4 (230-292)||(22303098-22303163)
chr4 (220-302)||(55638089-55638174)
chr4 (224-289)||(896975-897044)
chr4 (117-185)||(8130563-8130631)
chr4 (208-280)||(10046250-10046322)
chr4 (117-185)||(29877723-29877791)
chr4 (117-185)||(48591358-48591426)
chr4 (117-171)||(18630829-18630883)
chr4 (208-274)||(19725317-19725383)
chr4 (229-283)||(22397322-22397376)
chr4 (117-175)||(38876056-38876114)
chr4 (220-303)||(43983390-43983477)
chr4 (117-171)||(46704204-46704258)
chr4 (230-289)||(47202831-47202893)
chr4 (229-289)||(212965-213028)
chr4 (117-166)||(9201753-9201802)
chr4 (231-289)||(22117359-22117420)
chr4 (117-166)||(30956787-30956836)
chr4 (223-289)||(39932765-39932835)
chr4 (223-289)||(42617241-42617310)
chr4 (120-165)||(43213452-43213497)
chr4 (220-290)||(46650275-46650349)
chr4 (116-185)||(19298065-19298136)
chr4 (117-185)||(23297519-23297587)
chr4 (220-289)||(27368160-27368233)
chr4 (211-302)||(29032590-29032682)
chr4 (211-302)||(29044712-29044804)
chr4 (223-283)||(43415300-43415360)
chr4 (130-166)||(43699396-43699432)
chr4 (117-161)||(44490560-44490604)
chr4 (119-171)||(48667768-48667820)
chr4 (223-283)||(52700555-52700615)
[»] chr2 (35 HSPs)
chr2 (230-303)||(12238501-12238578)
chr2 (209-271)||(27931482-27931544)
chr2 (225-289)||(2757084-2757150)
chr2 (116-189)||(35515428-35515501)
chr2 (225-294)||(22422182-22422254)
chr2 (208-289)||(27880993-27881078)
chr2 (117-185)||(38471725-38471793)
chr2 (208-289)||(38471787-38471872)
chr2 (224-274)||(15155837-15155887)
chr2 (137-178)||(15155904-15155945)
chr2 (117-166)||(21788560-21788609)
chr2 (231-289)||(22898376-22898437)
chr2 (223-289)||(32366155-32366224)
chr2 (226-283)||(32522060-32522116)
chr2 (117-185)||(4027009-4027077)
chr2 (130-185)||(23956211-23956266)
chr2 (131-190)||(27880945-27881004)
chr2 (209-268)||(39070843-39070902)
chr2 (209-271)||(735991-736053)
chr2 (117-189)||(27931535-27931603)
chr2 (117-188)||(38010604-38010677)
chr2 (231-289)||(38216028-38216086)
chr2 (130-184)||(42064936-42064990)
chr2 (139-188)||(736045-736094)
chr2 (235-289)||(8441478-8441536)
chr2 (117-166)||(8832560-8832609)
chr2 (220-281)||(24439036-24439097)
chr2 (117-166)||(26440196-26440245)
chr2 (117-166)||(37420009-37420058)
chr2 (233-302)||(4004811-4004884)
chr2 (131-171)||(7480847-7480887)
chr2 (131-171)||(8441556-8441596)
chr2 (223-288)||(9140741-9140809)
chr2 (117-185)||(19683656-19683724)
chr2 (116-188)||(23756408-23756480)
[»] chr1 (38 HSPs)
chr1 (210-274)||(5610532-5610596)
chr1 (220-289)||(20169269-20169342)
chr1 (117-185)||(42367035-42367102)
chr1 (229-283)||(34265584-34265638)
chr1 (223-289)||(41196721-41196787)
chr1 (223-289)||(32497283-32497352)
chr1 (228-289)||(49971256-49971321)
chr1 (130-185)||(12256690-12256745)
chr1 (208-283)||(15631919-15631994)
chr1 (223-303)||(37329423-37329507)
chr1 (223-302)||(6337767-6337850)
chr1 (235-310)||(8410133-8410211)
chr1 (117-183)||(9572718-9572784)
chr1 (117-183)||(48819385-48819451)
chr1 (117-185)||(10850000-10850068)
chr1 (223-283)||(17628436-17628495)
chr1 (208-289)||(26542978-26543063)
chr1 (130-182)||(34265656-34265708)
chr1 (220-283)||(36259299-36259362)
chr1 (130-182)||(46263484-46263536)
chr1 (131-183)||(46473180-46473232)
chr1 (230-281)||(13412471-13412521)
chr1 (229-289)||(35282611-35282675)
chr1 (208-246)||(1683897-1683935)
chr1 (116-166)||(14862936-14862986)
chr1 (116-166)||(14868488-14868538)
chr1 (231-302)||(15515366-15515441)
chr1 (117-171)||(37329346-37329400)
chr1 (223-289)||(5243415-5243484)
chr1 (231-289)||(5347160-5347221)
chr1 (231-289)||(17814196-17814257)
chr1 (231-283)||(15791399-15791450)
chr1 (122-154)||(23368956-23368988)
chr1 (117-185)||(28690088-28690156)
chr1 (226-274)||(42363624-42363672)
chr1 (117-185)||(46689484-46689552)
chr1 (210-270)||(47413400-47413460)
chr1 (137-169)||(49822836-49822868)
[»] scaffold0332 (1 HSPs)
scaffold0332 (220-303)||(14754-14841)
[»] scaffold0006 (1 HSPs)
scaffold0006 (220-281)||(279000-279060)
[»] scaffold0015 (1 HSPs)
scaffold0015 (130-185)||(48575-48630)
[»] scaffold0091 (2 HSPs)
scaffold0091 (131-189)||(2509-2567)
scaffold0091 (256-302)||(2623-2673)
[»] scaffold0027 (1 HSPs)
scaffold0027 (229-274)||(142363-142408)


Alignment Details
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 77 - 310
Target Start/End: Original strand, 10730102 - 10730339
Alignment:
Q  77 gagttactctatgagactttggccccgtttgagacgagctttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttatta 176  Q
    ||||||||| |||| ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10730102 gagttactccatgacactttggccccgtttcaaatgagctttatgaaaaatgacttatacaaataaataagtttttatcttaattcataagttcttatta 10730201  T
Q  177 acaaaaattatactctcnnnnnnnnn----acaaagaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacata 272  Q
    ||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10730202 acaaaaattatactcttttttttttttttgacaaagaaaattatacttttataaactgttttttcataaactacattaacaagtttataaataatacata 10730301  T
Q  273 aatatttatttgcataaactctaaaataagctaattca 310  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10730302 aatatttatttgcataaactctaaaataagctaattca 10730339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 32165272 - 32165359
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaat 307  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||    ||||||||| |||||||||||||||||||||||    
T  32165272 ataaactgttttttcataaactactttaaaaaatt-ataaataatacataaaaacttatttattttcataaactctaaaataagctaat 32165359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 6632728 - 6632664
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    ||||||||||||||||    
T  6632728 tgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcataa 6632664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 21610045 - 21610130
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacat----aaatatttatttgcataa 289  Q
    ||||||||||  || ||||||| ||||||||||||||||||||| ||| ||||||||||| |||    ||||||||||||||||||    
T  21610045 gaaaattatatattcataaactattttttcataaactacattaacaagcttataaataattcataaagaaatatttatttgcataa 21610130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 7576795 - 7576866
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    ||||||||| | | |||||||||||||||||||||||| |||||| |||| ||||||| ||| |||||||||    
T  7576795 ttatgaaaattaatttatacaaataaataagtttttatgttaattaataagttcttatcaacgaaaattata 7576866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 29052408 - 29052321
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaa 306  Q
    |||||||||||||||||||| ||| |||| ||  ||||||||||||||||||    ||||| |||| |||| ||||||||||||||||    
T  29052408 ataaactgttttttcataaaataccttaacaaacttataaataatacataaaagtttatttttttgtataagctctaaaataagctaa 29052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 32675823 - 32675877
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||    
T  32675823 ttatgaaaaataacttatgcaaataaataagtttttatattaattcataagttct 32675877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 34413397 - 34413343
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    |||||||| ||||||||||||||||||||| | ||  ||||||||||||||||||    
T  34413397 tttataaattgttttttcataaactacatttacaaacttataaataatacataaa 34413343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 11795663 - 11795594
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa-attcttattaacaaaaatt 185  Q
    ||||||||||| | ||||||||||||| ||||||||||  ||||||||||  ||||||||||| ||||||    
T  11795663 ttatgaaaaataatttatacaaataaacaagtttttatgctaattcataagtttcttattaacgaaaatt 11795594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 21609997 - 21610054
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    |||| ||||||||||||||||||| |||||| |||| |||||| |||| |||||||||    
T  21609997 ttatgcaaataaataagtttttattttaatttataagttcttactaacgaaaattata 21610054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 21871218 - 21871287
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatta 186  Q
    |||||||||||   |||||||||||||||||||||||| || |||||||||| || | |||| |||||||    
T  21871218 ttatgaaaaatagtttatacaaataaataagtttttatgttgattcataaatgctcactaacgaaaatta 21871287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 2040117 - 2040169
Alignment:
Q  119 atgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||| |||||| ||||||||||||||||||| |||||| |||| ||||    
T  2040117 atgaaaaataacttatgcaaataaataagtttttatattaatttataagttct 2040169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 18078243 - 18078319
Alignment:
Q  209 aaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttatttgc 285  Q
    |||||||||  ||||||||||||||||||||||| |||||| | ||  |||| || |||| ||||| ||||||||||    
T  18078243 aaaattatatctttataaactgttttttcataaaatacattgacaaacttatgaaaaataaataaaaatttatttgc 18078319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 6752964 - 6752913
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaat 168  Q
    |||||||||||  ||||| |||||||||||| |||||| |||||||||||||    
T  6752964 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataaat 6752913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 10755231 - 10755285
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||| |||||||||||| |||||| ||||||||||| |||||| |||| ||||||    
T  10755231 ttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaatt 10755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 23239399 - 23239345
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| ||||    
T  23239399 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttct 23239345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 32615433 - 32615495
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    |||||||||||||||    
T  32615433 gttttttcatcaactaccttaaaaa-tttataaataatacataaaaacttatttatttgcataa 32615495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 35071362 - 35071416
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| ||||    
T  35071362 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttct 35071416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 2027110 - 2027175
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaa 182  Q
    |||||||||||  ||||| |||||| ||||  |||||| ||||||||||| |||||| ||||||||    
T  2027110 ttatgaaaaatagcttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaa 2027175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 2034246 - 2034324
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    |||||||||||||||||| || | ||  ||||||||||||||||||    ||||||||||||||| ||| |||| ||||    
T  2034246 tgttttttcataaactaccttgacaaacttataaataatacataaaagcttatttatttgcataagctcaaaaacaagc 2034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 17915012 - 17914951
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  17915012 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataa 17914951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 23239238 - 23239275
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttat 154  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  23239238 ttatgaaaaataacttatacaaataaataagcttttat 23239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 3829885 - 3829921
Alignment:
Q  149 ttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  3829885 ttttatgttaattcataagttcttattaacaaaaatt 3829921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 4808646 - 4808599
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacat 271  Q
    |||||||||||||||||||||||  |||||||  |||||||||||||||    
T  4808646 ataaactgttttttcataaactatcttaaaaa-cttataaataatacat 4808599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 10054457 - 10054373
Alignment:
Q  222 tataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    |||||| | ||||||||||||||||||| | ||  |||| |||||||||||||    ||||||||||||||| ||| |||||||||    
T  10054457 tataaattattttttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataagctc-aaaataagc 10054373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 10184264 - 10184332
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  |||||| ||||||||||| |||||| |||||| ||||  ||||| |||| ||||||    
T  10184264 ttatgaaaaatagcttatataaataaataagcttttattttaatttataagctcttactaacgaaaatt 10184332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 10184341 - 10184400
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||| |||||||||||||||||| |||||||  |||||||||||| ||||| | ||||||    
T  10184341 ataaattgttttttcataaactaccttaaaaa-cttataaataatagataaaaacttattt 10184400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 22816594 - 22816667
Alignment:
Q  221 ttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaa 290  Q
    |||||||||||||||||||||| || ||| ||||  |||| |||| ||||||||    ||||||||||||||||    
T  22816594 ttataaactgttttttcataaattatatttaaaaacttatgaatattacataaaaacttatttatttgcataaa 22816667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 29659150 - 29659049
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa--atatttatttgcataaactctaaaataagcta 305  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||  |||||||||||||||| |||||||||||| ||    
T  29659150 gaaaattgtactttcataaactgttttttcttaaactacattaacaagcttataaataatacataaacatatttatttgcataagctctaaaataagata 29659051  T
Q  306 at 307  Q
    ||    
T  29659050 at 29659049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 43319093 - 43319008
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||    
T  43319093 gaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaagacatatttatttgcataa 43319008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 28357427 - 28357339
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacata----aatatttatttgcataaactctaaaataagctaat 307  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||     |||||||||||||||| || ||||||||||||||    
T  28357427 ataaactgttttttcataaactacattaacaaacttataaataatacatataggcatatttatttgcataagctttaaaataagctaat 28357339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 6025993 - 6026068
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataa---atatttatttgcataaact 292  Q
    ||||||||| ||||||||||||||||| |||| ||  |||||||||||||||||   |||||||||||||||||||    
T  6025993 tttataaaccgttttttcataaactacgttaacaaaattataaataatacataaaacatatttatttgcataaact 6026068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 38461279 - 38461381
Alignment:
Q  209 aaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagct 304  Q
    |||||||||  || |||||||||||||||||||| |||||| | ||  ||||||||||||||||||    |||||||||  |||| |||||||||||| |    
T  38461279 aaaattatatcttcataaactgttttttcataaaatacatttacaaacttataaataatacataaaggcttatttatttttataagctctaaaataagtt 38461378  T
Q  305 aat 307  Q
    |||    
T  38461379 aat 38461381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 15122619 - 15122560
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  15122619 ataaactgttttttcataaactaccttaaaaa-cttataaataatacataaaaacttattt 15122560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 29418748 - 29418833
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||| ||| || ||||| ||||||||||||||||||||||  | | |||||||||||||||||    ||||||||||||||||    
T  29418748 gaaaattgtaccttcataaattgttttttcataaactacattagcatgcttataaataatacataaagacatatttatttgcataa 29418833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 23087796 - 23087858
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacat--aaatatttatttgcataa 289  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||  ||| ||||||||||||||    
T  23087796 tgttttttcataaactatattaacaagcttataaataatacataaaaacatttatttgcataa 23087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 9477474 - 9477420
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||| ||||||||||||||||||||||||||||||| |||| | |||| ||||||    
T  9477474 ttatgcaaataaataagtttttatcttaattcataagttctcagtaacgaaaatt 9477420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 29418700 - 29418754
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||| |||||||||||||||||||||||||| ||||||||| | |||| ||||||    
T  29418700 ttatgcaaataaataagtttttatcttaatttataaattctcactaacgaaaatt 29418754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 29659212 - 29659158
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||| ||||    
T  29659212 ttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttct 29659158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 40697158 - 40697109
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||  |||||||||||||||||| |||||| |||||||||||    
T  40697158 ttatgaaaaatagcttatacaaataaataagcttttatgttaattcataa 40697109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 43319132 - 43319083
Alignment:
Q  140 taaataagtttttatcttaattcataaattcttattaacaaaaattatac 189  Q
    ||||||||||||||||||||||||||| |||| | |||| ||||||||||    
T  43319132 taaataagtttttatcttaattcataagttctcactaacgaaaattatac 43319083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 780587 - 780651
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaact 292  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    ||||||||||||||||||    
T  780587 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataaact 780651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 4728934 - 4728851
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||||  || || ||||||||||||    |||||||||||||||    
T  4728934 gaaaattata-tttcataaactgttttttcataaactaccttaaaaa-cttgtagataatacataaaaacttatttatttgcataa 4728851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 5203453 - 5203504
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  5203453 ttttctcataaactaccttaaaaa-tttataaataatacataaatacttattt 5203504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 6025939 - 6025987
Alignment:
Q  137 aaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||| |||||||||||||||||||||| || | |||||||||||||    
T  6025939 aaataaacaagtttttatcttaattcataagttataattaacaaaaatt 6025987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 6125438 - 6125374
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaa 181  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||| | |||||||    
T  6125438 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataatttctcactaacaaa 6125374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 15364154 - 15364086
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaat 184  Q
    ||||| |||||  |||||| |||||||||||| |||||| |||||||||||  ||||||||| ||||||    
T  15364154 tttataaaaaagaacttatgcaaataaataagcttttatgttaattcataagatcttattaataaaaat 15364086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 28625632 - 28625584
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcata 165  Q
    ||||||||||| |||||| |||||||||||| |||||| ||||||||||    
T  28625632 ttatgaaaaataacttatgcaaataaataagcttttatgttaattcata 28625584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 13739382 - 13739331
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaa 167  Q
    |||||||||||| |||||| |||||||||||| ||||||  |||||||||||    
T  13739382 tttatgaaaaataacttatgcaaataaataagcttttatgataattcataaa 13739331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 28357491 - 28357436
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||| ||||||||||||||||||||||||||| ||| |||| | |||| ||||||    
T  28357491 cttatgcaaataaataagtttttatcttaattcgtaagttctcactaacgaaaatt 28357436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 1371930 - 1371964
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttt 151  Q
    ||||||||||| |||||||||||||||||||||||    
T  1371930 ttatgaaaaataacttatacaaataaataagtttt 1371964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 7565220 - 7565266
Alignment:
Q  139 ataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||||||||||| |||||||||||| | |||| ||||||    
T  7565220 ataaataagtttttatcttagttcataaattctcactaacgaaaatt 7565266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 9477362 - 9477328
Alignment:
Q  240 aaactacattaaaaagtttataaataatacataaa 274  Q
    |||||||||||| ||||||||||||||||||||||    
T  9477362 aaactacattaacaagtttataaataatacataaa 9477328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 16722101 - 16722031
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaa 290  Q
    |||||| |||| ||| |||||||| ||||||| |||||||||||||||||||    ||||||||||||||||    
T  16722101 ataaacggtttcttcgtaaactaccttaaaaa-tttataaataatacataaaaacttatttatttgcataaa 16722031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 17668479 - 17668405
Alignment:
Q  218 cttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||| ||||||  |||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  17668479 ctttcataaacgattttttcataaactaccttaaaaa-cttataaataatacataaacacctatttatttgcataa 17668405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 29922122 - 29922172
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||||||  ||||| |||||||||||| |||||| |||||||||||    
T  29922122 tttatgaaaaatagcttatgcaaataaataagcttttatattaattcataa 29922172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 33757159 - 33757093
Alignment:
Q  226 aactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||||||||  |||||||  ||||||||||||||||||    |||||||||||||||    
T  33757159 aactgttttttcataaactagcttaaaaa-cttataaataatacataaaaacttatttatttgcataa 33757093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 5559856 - 5559921
Alignment:
Q  120 tgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||  ||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||    
T  5559856 tgaaaaatagcttatgcaaataaataagcttttatgtaaattcataaattctcactaacgaaaatt 5559921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 12467420 - 12467349
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatct---taattcataaattcttattaacaaaaatt 185  Q
    ||||||||||| |||||| |||||||||||| |||||| |   |||||||||| |||| | |||||||||||    
T  12467420 ttatgaaaaataacttatgcaaataaataagcttttatgttagtaattcataagttctcactaacaaaaatt 12467349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 12987025 - 12987095
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||||| || | ||| |||| || ||||||||||    |||||||||||||||    
T  12987025 ataaactgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataa 12987095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 22201865 - 22201914
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||   |||||||||||||||||||||||| ||| |||||||    
T  22201865 ttatgaaaaatagtttatacaaataaataagtttttatgttatttcataa 22201914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 42478966 - 42478929
Alignment:
Q  129 acttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  42478966 acttatgcaaataaataagtttttatattaattcataa 42478929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 10537235 - 10537300
Alignment:
Q  228 ctgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||||||  || | ||| ||||||||||||||||||    |||||||||||||||    
T  10537235 ctgttttttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataa 10537300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 15167648 - 15167716
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||   ||||  |||||||| || |||||| |||||||||||||||| |||||| ||||||    
T  15167648 ttatgaaaaatagtttatgtaaataaattagcttttatgttaattcataaattctcattaacgaaaatt 15167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 24030366 - 24030298
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||| ||||||  ||||| |||||||||||| |||||| ||||||||||| |||| | |||| ||||||    
T  24030366 ttattaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaatt 24030298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 26003149 - 26003105
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaatt 161  Q
    ||||||||||| ||||||  |||||||||||||||||| ||||||    
T  26003149 ttatgaaaaataacttatgtaaataaataagtttttattttaatt 26003105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 29922200 - 29922273
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaact 292  Q
    |||| |||| |||||||||||||| || | ||| |||| |||||||||||||    ||||||||||||||||||    
T  29922200 ataagctgtgttttcataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataaact 29922273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 10448867 - 10448779
Alignment:
Q  205 aaagaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||    
T  10448867 aaagaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataa 10448779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 38524155 - 38524075
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaat 307  Q
    |||||||||||||||| |||| || |||||||||||||||| ||    |||||||||||||||||||||||||||| ||||    
T  38524155 ttttttcataaactaccttaacaaatttataaataatacattaatacttatttatttgcataaactctaaaataagttaat 38524075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 43376785 - 43376684
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacat--aaatatttatttgcataaactctaaaataagcta 305  Q
    ||||||| ||| ||||||||   |||| |||||||||||||||| ||| |||||||||||||||  | | |||||||||||||| || ||||||||||||    
T  43376785 gaaaattgtacctttataaataattttatcataaactacattaacaagcttataaataatacattaagacatttatttgcataagctgtaaaataagcta 43376686  T
Q  306 at 307  Q
    ||    
T  43376685 at 43376684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 53787699 - 53787757
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    ||||| ||||||||||||||||||||||||||||||| |||| | ||||||||||||||    
T  53787699 cttatgcaaataaataagtttttatcttaattcataagttctcaataacaaaaattata 53787757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 53787749 - 53787823
Alignment:
Q  209 aaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||  |||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||| || |||||    
T  53787749 aaaattatatctttataaactgttttttcgtaaactatattaaaaagcttataagtaatacataaaaatatattt 53787823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 10449116 - 10449057
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattatac 189  Q
    ||||| ||||||||||||||||||||||||||||||| |||| | |||| ||||||||||    
T  10449116 cttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattatac 10449057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 7124643 - 7124697
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||||||||||||| || |||||| |||| ||||||||||||||||||    
T  7124643 ttatacaaataaataagttttgatgttaattgataagttcttattaacaaaaatt 7124697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 28741210 - 28741295
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacata----aatatttatttgcataa 289  Q
    ||||||| ||| || |||| ||||||||||||||||||| |||| ||| |||||| |||||||||    |||||||||||||||||    
T  28741210 gaaaattgtaccttcataatctgttttttcataaactactttaacaagcttataagtaatacataaaggaatatttatttgcataa 28741295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 29614268 - 29614209
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  29614268 ataaactgttttttcataaactaccttaaaaa-attataaataatacataaaaacttattt 29614209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 36266383 - 36266316
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaat 184  Q
    ||||||||||| | |||| ||||||||||||||||||| |||||| |||| || |||||||| |||||    
T  36266383 ttatgaaaaataatttatgcaaataaataagtttttattttaatttataagtttttattaacgaaaat 36266316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 3645374 - 3645318
Alignment:
Q  226 aactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  3645374 aactgttttttcataaactaccttaaaaa-attataaataatacataaaaacttattt 3645318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 3876197 - 3876246
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||  ||||| ||||||||||||||||||| |||||||||||    
T  3876197 ttatgaaaaatagcttatgcaaataaataagtttttatattaattcataa 3876246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 20894574 - 20894518
Alignment:
Q  226 aactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||| | ||||||    
T  20894574 aactgttttttcaaaaactacattaaaaa-attataaataatacataaaaacttattt 20894518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 22809146 - 22809195
Alignment:
Q  136 caaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  22809146 caaataaataagtttttatgttaattcataagttcttcttaacgaaaatt 22809195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 40240511 - 40240560
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||  ||||| |||||||||||| ||||||||||||||||||    
T  40240511 ttatgaaaaatagcttatgcaaataaataagcttttatcttaattcataa 40240560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 33946484 - 33946552
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| ||||||||| || |||||| ||||||||||| |||| |||||| ||||||    
T  33946484 ttatgaaaaatagcttatgcaaataaatgagcttttatattaattcataagttctcattaacgaaaatt 33946552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 37243541 - 37243493
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacat 271  Q
    ||||||| |||||||||||||||| |||| ||| |||||||||||||||    
T  37243541 ataaactattttttcataaactacgttaacaagcttataaataatacat 37243493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 37456442 - 37456504
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||| | |||||||||||||||  ||||||| || |||||||||||||||| ||||||||    
T  37456442 tttataaattattttttcataaactatcttaaaaactt-ataaataatacataaaaatttattt 37456504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 4974380 - 4974338
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacat 271  Q
    |||||||||||||||||| |||  |||||||||||||||||||    
T  4974380 tgttttttcataaactaccttagcaagtttataaataatacat 4974338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 30473160 - 30473214
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||| |||| ||  ||||||||||||||| ||| |||||||    
T  30473160 tgttttttcataaactaccttaacaaccttataaataatacattaatgtttattt 30473214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 34707647 - 34707701
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||| |||||  ||||||||||||||||||| ||||||| ||| ||||    
T  34707647 ttatgaaaaataacttaagcaaataaataagtttttatgttaattcgtaagttct 34707701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 34707729 - 34707775
Alignment:
Q  228 ctgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    ||||||||||||||||||| |||| ||| |||| |||||||||||||    
T  34707729 ctgttttttcataaactaccttaacaagcttatgaataatacataaa 34707775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 40581012 - 40581078
Alignment:
Q  119 atgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||  ||||| |||||||||||| |||||| ||||||||||| |||| | |||| ||||||    
T  40581012 atgaaaaatatcttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaatt 40581078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 46573392 - 46573442
Alignment:
Q  121 gaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||  ||||| |||||||||||| |||||| ||||||||||||||||    
T  46573392 gaaaaatagcttatgcaaataaataagcttttatgttaattcataaattct 46573442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 289
Target Start/End: Original strand, 4257321 - 4257382
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  4257321 ttttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataa 4257382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 42381193 - 42381262
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||||| ||||  |||||| ||||||||||| |||||| ||||  ||||| |||| ||||||    
T  42381193 tttatgaaaaatgatttatgtaaataattaagtttttattttaatttataagctcttactaacgaaaatt 42381262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 52895358 - 52895407
Alignment:
Q  136 caaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||| |||||| |||||||||||||||| | |||| ||||||    
T  52895358 caaataaataagcttttatgttaattcataaattctcactaacgaaaatt 52895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 2086702 - 2086762
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||| ||||||||||||| || || | ||| ||||||||||||||||||  |||||||    
T  2086702 ataaactattttttcataaaccacctttacaagattataaataatacataaaagtttattt 2086762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 30917513 - 30917565
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||| |||||| || |||| || ||||||||||||||||||| ||||||||    
T  30917513 tttttttataaacaaccttaataattttataaataatacataaaaatttattt 30917565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 38524240 - 38524172
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||   ||||| |||||||||||| |||||| |||||||||||  ||||| |||| ||||||    
T  38524240 ttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatcttactaacgaaaatt 38524172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 42956125 - 42956181
Alignment:
Q  129 acttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||| ||||||||||||||||||| |||||| |||| |||| | |||| ||||||    
T  42956125 acttatgcaaataaataagtttttatgttaatttataagttctcactaacgaaaatt 42956181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 28280793 - 28280696
Alignment:
Q  214 tatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataaactctaaaataagctaat 307  Q
    ||||| || |||||| |||||||||||||||||||||| ||  |||||||||||||||||    |||||||||||||||| |||||||||||||||||    
T  28280793 tataccttcataaacagttttttcataaactacattaacaaacttataaataatacataaatgcatatttatttgcataagctctaaaataagctaat 28280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 14724911 - 14724971
Alignment:
Q  129 acttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattatac 189  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14724911 acttatgcaaataaataagtttttatcttaattcataagttcttattaacgaaaattatac 14724971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 23412812 - 23412751
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttat 281  Q
    |||||||| ||||||||||||||||| ||| | |||||||| ||||||||||||||| ||||    
T  23412812 tttataaattgttttttcataaactatattgacaagtttatgaataatacataaatacttat 23412751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 28280861 - 28280796
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaa 182  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||| |||| | ||||||||    
T  28280861 ttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaacaaaa 28280796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 14724961 - 14725063
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa---atatttatttgcataaactctaaaataagct 304  Q
    ||||||||||| |  ||||  |||||||||||||| |||||||| ||  |||||||||||| ||||   || ||||||||||||| || |||||||||||    
T  14724961 gaaaattatacctacataagttgttttttcataaattacattaacaatcttataaataatatataaaagatctttatttgcataagctttaaaataagct 14725060  T
Q  305 aat 307  Q
    |||    
T  14725061 aat 14725063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 24866947 - 24867011
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacata 272  Q
    ||||||| ||| || |||| |||||||||||||||||||||||| ||  ||||||||||||||||    
T  24866947 gaaaattgtaccttcataagctgttttttcataaactacattaacaatcttataaataatacata 24867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 24350453 - 24350524
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    ||||||||| |  ||||| |||||||||||| |||||| ||||||||||| |||||| |||| |||||||||    
T  24350453 ttatgaaaactagcttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattata 24350524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 43577299 - 43577236
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||  |||||||| ||||||||| |||| || |||||||||||||||| |||||||||||    
T  43577299 tttataagttgtttttttataaactaccttaacaaatttataaataatacattaatatttattt 43577236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 2019575 - 2019645
Alignment:
Q  118 tatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    ||||||||||  ||| | |||||||||||| |||||| |||||||||||||||| ||| || |||||||||    
T  2019575 tatgaaaaataccttgtgcaaataaataagcttttatgttaattcataaattctcattgacgaaaattata 2019645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 2563427 - 2563373
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||| |||| ||  ||||||||||||||| |||||||||||    
T  2563427 tgttttttcataaactactttaacaaacttataaataatacattaatatttattt 2563373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 31079174 - 31079265
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataaactctaaaataagctaat 307  Q
    ||||||||| |||||||| |||||||| |||| ||  ||| |||||||||||||    |||||||||  ||||| |||||||||||||||||    
T  31079174 tttataaacagttttttcgtaaactactttaacaaacttaaaaataatacataaatgcatatttattaccataagctctaaaataagctaat 31079265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 37410927 - 37410983
Alignment:
Q  226 aactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  37410927 aactgttttttcataaactaccttaaaaa-attataaataatacataaaaacttattt 37410983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 42363328 - 42363397
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||| ||||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  42363328 ataaacggttttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataa 42363397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 10213847 - 10213779
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| || ||| ||||||||||| |||| | |||||||||||    
T  10213847 ttatgaaaaatagcttatgcaaataaataagcttgtatgttaattcataagttctcactaacaaaaatt 10213779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 12607154 - 12607095
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||| ||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  12607154 ataaaccgttttttcataaactaccttaaaaa-cttataaataatacataaaaacttattt 12607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 14262466 - 14262410
Alignment:
Q  129 acttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||| |||| |||||||||||||| |||||||||||  ||||| |||||||||||    
T  14262466 acttatgcaaaaaaataagtttttatgttaattcataagatcttactaacaaaaatt 14262410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 19327944 - 19327872
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| |||||||||||||| |||  |||| |||||||||||||    |||||||||||||||    
T  19327944 tttataaactgtttttccataaactacattacaaa-cttatgaataatacataaaagtttatttatttgcataa 19327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 25465781 - 25465849
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| || | | |||||||||||    
T  25465781 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaatt 25465849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 310
Target Start/End: Complemental strand, 28879127 - 28879042
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaattca 310  Q
    |||| ||||||||||||| || | ||| |||| |||||||||||||    ||||||||||||||| ||| ||||||||| ||||||    
T  28879127 tgttatttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaataagccaattca 28879042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 31079113 - 31079149
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||| |||||||||||||||||||||||||||||||    
T  31079113 cttatgcaaataaataagtttttatcttaattcataa 31079149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 32975839 - 32975771
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||| |  ||||||||||    
T  32975839 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaatt 32975771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 38195618 - 38195570
Alignment:
Q  137 aaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  38195618 aaataaataagtttttattttaatttataaactctcattaacaaaaatt 38195570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 218273 - 218323
Alignment:
Q  232 tttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  218273 tttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 694833 - 694883
Alignment:
Q  232 tttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  694833 tttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 694883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 699042 - 699092
Alignment:
Q  232 tttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  699042 tttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 699092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 731896 - 731946
Alignment:
Q  232 tttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  731896 tttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 731946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 855792 - 855842
Alignment:
Q  232 tttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  855792 tttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 855842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 28879207 - 28879152
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattctt 172  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||||    
T  28879207 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctt 28879152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 35168452 - 35168503
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    |||||||||||||||||||||||| || | ||| |||| |||||||||||||    
T  35168452 ataaactgttttttcataaactaccttgacaagcttatgaataatacataaa 35168503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 37966118 - 37966173
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||||  ||||||  || ||||||||||||||||||||||||||| ||||    
T  37966118 tttatgaaaaagaacttatgtaattaaataagtttttatcttaattcataagttct 37966173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 11988271 - 11988201
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaa 290  Q
    |||||| |||||||||| |||||| ||||||| || ||||||||||||||||    ||||||||||||||||    
T  11988271 ataaacggttttttcatgaactaccttaaaaactt-ataaataatacataaaaacttatttatttgcataaa 11988201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 24866885 - 24866939
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||   ||||| |||||||||||||||||||||||||| |||| ||||    
T  24866885 ttatgaaaaagagcttatgcaaataaataagtttttatcttaatttataagttct 24866939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 35453485 - 35453394
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaattca 310  Q
    |||| ||||||||||||||||||| || | ||  |||| |||||||||||||    ||||||||||||||| ||  ||||||||| ||||||    
T  35453485 ataagctgttttttcataaactaccttgataaacttatgaataatacataaaagcttatttatttgcataagctaaaaaataagccaattca 35453394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 42102174 - 42102112
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  42102174 gttttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataa 42102112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 19925322 - 19925391
Alignment:
Q  117 ttatgaaaaatga-cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||| || ||||||||||||| |||| |||||| |||||||||||  ||||| |||| ||||||    
T  19925322 ttatgaaaaaagagcttatacaaataattaagcttttatgttaattcataatatcttactaacgaaaatt 19925391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 38195561 - 38195492
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||| |||||||| |||||||  |||||||||||| |||||    |||||||||||||||    
T  38195561 ataaactgttttttcgtaaactaccttaaaaa-cttataaataatatataaaaacttatttatttgcataa 38195492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 32751228 - 32751153
Alignment:
Q  208 gaaaattatacttttataaactgtttttt-cataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||| || ||||||||| |||||||| |||||||||| |||||||  |||| |||| |||||||| ||||||||    
T  32751228 gaaaattgtatttttataaaatgtttttttcataaactactttaaaaa-cttattaatagtacataaaaatttattt 32751153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 37410847 - 37410915
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  |||||  |||||||||||||| ||| |||||| |||| |||||| |||| ||||||    
T  37410847 ttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaatt 37410915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 43818890 - 43818976
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataa--atatttatttgcataaactctaaaataagctaat 307  Q
    ||||||||||||||||||||  ||||||| ||| |||||||||||||||||  | |||||||||||||| |||||||||||||||||    
T  43818890 ataaactgttttttcataaataacattaacaagcttataaataatacataaagacatttatttgcataagctctaaaataagctaat 43818976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 22032852 - 22032767
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||| ||| || ||||| ||||||||||||||||||||||| | | |||||||||||||||||    ||||||||||||||||    
T  22032852 gaaaattgtaccttcataaattgttttttcataaactacattaacatgcttataaataatacataaaaacatatttatttgcataa 22032767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 47654410 - 47654473
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacat 271  Q
    ||||||| ||| || ||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  47654410 gaaaattgtaccttcataaactgttttttcataaactacattaacaagcttatatataatacat 47654473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 9024855 - 9024752
Alignment:
Q  208 gaaaattatacttttataaactgtttttt-cataaactacattaaaaagtttataaataatacataaa---tatttatttgcataaactctaaaataagc 303  Q
    ||||||| ||| || |||||||||||||| ||||||||||||||| |    |||||||||||||||||   ||||| ||| ||||| |||||||||||||    
T  9024855 gaaaattgtaccttcataaactgtttttttcataaactacattaacacacgtataaataatacataaaaaatatttgtttacataagctctaaaataagc 9024756  T
Q  304 taat 307  Q
    ||||    
T  9024755 taat 9024752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 14675971 - 14676040
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  14675971 ataaactgttttttcataaactaccttaaaaa-cttataaataatacataaacacctatttatttgcataa 14676040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 16958890 - 16958831
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||| ||||||||||||||||| |||||||  |||||||||||||||||| ||||||||    
T  16958890 ataaacggttttttcataaactaccttaaaaa-cttataaataatacataaaaatttattt 16958831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 19914020 - 19913960
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||| |||||||||||||||||||||| || ||||||||||  ||||||| ||||||||    
T  19914020 ataaaccgttttttcataaactacattaacaaatttataaatagcacataaaaatttattt 19913960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 44613407 - 44613475
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||| ||||| |||||||    
T  44613407 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctaattaataaaaatt 44613475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 47654348 - 47654416
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||| |||| | |||| ||||||    
T  47654348 ttatgaaaaagatcttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaatt 47654416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 43818812 - 43818866
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||| ||||    
T  43818812 ttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttct 43818866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 9534030 - 9534079
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaa 180  Q
    |||| ||||||||||||||||||| |||||| ||||||||| ||||||||    
T  9534030 ttatgcaaataaataagtttttatgttaatttataaattctcattaacaa 9534079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 16932948 - 16933000
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  16932948 gttttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 16933000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 16938331 - 16938383
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  16938331 gttttttcataaactaccttaaaaactt-ataaataatacataaaaatttattt 16938383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 25908446 - 25908397
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||| ||||    
T  25908446 ttatgaaaaatggcttatgcaaataaataagtttttatgttaatttataa 25908397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 29378798 - 29378729
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||||  ||||| |||||||||||| |||||  ||||||||||| |||||| |||| ||||||    
T  29378798 tttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaatt 29378729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 22032914 - 22032846
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||   ||||| |||||||||||||||||||||||||| |||| |||| | |||| ||||||    
T  22032914 ttatgaaaaaaagcttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaatt 22032846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 39279582 - 39279534
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcata 165  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||||    
T  39279582 ttatgaaaaatagcttatacaaataaataagcttttatgttaattcata 39279534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 21027526 - 21027585
Alignment:
Q  225 aaactgttttttcataaactacattaaaaagtttataaataatacataaatatttatttg 284  Q
    ||||||||||||||||||| || |||| ||  |||||||||||||||||| | |||||||    
T  21027526 aaactgttttttcataaaccaccttaataaacttataaataatacataaaaacttatttg 21027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 25655717 - 25655666
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaat 168  Q
    ||||||||||| |||| | ||||||||||||||||||| |||||||| ||||    
T  25655717 ttatgaaaaataacttttgcaaataaataagtttttattttaattcaaaaat 25655666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 35809159 - 35809095
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||| |||| ||| ||||||||||||||| ||    |||||||||||||||    
T  35809159 tgttttttcataaactacgttaacaagcttataaataatacattaatgcttatttatttgcataa 35809095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 47511118 - 47511034
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    |||| ||||||||||||| ||| | |||| ||| |||| |||||||||||||    ||||||||||||||| ||| |||||||||    
T  47511118 ataagctgttttttcatagacttccttaacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaataagc 47511034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 47862799 - 47862714
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa---tatttatttgcataaactctaaaataag 302  Q
    |||||||| | ||||||||||||  || |||||||  ||| |||||||||||||    ||||||||||| ||||||||||||||||    
T  47862799 tttataaattattttttcataaatcaccttaaaaaacttaaaaataatacataatgcttatttatttgcgtaaactctaaaataag 47862714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 14691295 - 14691361
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    ||||||||||  || ||||| |||||||||||||| |||||| | ||| |||| |||||||||||||    
T  14691295 gaaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaataatacataaa 14691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 26331917 - 26331867
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaa 167  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||||    
T  26331917 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataaa 26331867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 28004651 - 28004589
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  28004651 gttttttcataaactac-ttaaaaaaattataaataatacataaaaacttatttatttgcataa 28004589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 29390485 - 29390539
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||||   |||| |||||||||||| |||||| ||||||||||||||||    
T  29390485 ttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataaattct 29390539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 33204986 - 33204932
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| ||||    
T  33204986 ttatgaaaaatatcttatgcaaataaataagcttttatgttaattcataagttct 33204932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 35246739 - 35246677
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||    |||||||||||||||    
T  35246739 gttttttcataaactaccttaaaaacttt-taaataatacataaaaacttatttatttgcataa 35246677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 6406801 - 6406838
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttat 154  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  6406801 ttatgaaaaataacttatacaaataaataagattttat 6406838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 12473431 - 12473402
Alignment:
Q  220 tttataaactgttttttcataaactacatt 249  Q
    ||||||||||||||||||||||||||||||    
T  12473431 tttataaactgttttttcataaactacatt 12473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 20888726 - 20888677
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||| ||||    
T  20888726 ttatgaaaaataacttatgcaaataagtaagtttttatgttaatttataa 20888677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 22575661 - 22575591
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||| ||  |||| ||  ||||||||||||||||||    |||||||||||||||    
T  22575661 ataaactgttttttcataaaatatcttaacaaacttataaataatacataaaaacgtatttatttgcataa 22575591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 23137182 - 23137234
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaatatttatttg 284  Q
    ||||| |||||||||| ||||||| || |||||||||||||||| |||||||||    
T  23137182 tttttacataaactaccttaaaaactt-ataaataatacataaaaatttatttg 23137234  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 33288009 - 33288058
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||| |  ||||| ||||||||||||||||||| |||||||||||    
T  33288009 ttatgaaaactagcttatccaaataaataagtttttatgttaattcataa 33288058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 15819490 - 15819522
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattca 163  Q
    |||||||||||||||||||||||| ||||||||    
T  15819490 ttatacaaataaataagtttttatgttaattca 15819522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 25536340 - 25536293
Alignment:
Q  235 ttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||| ||||||| ||||||||||||||||||| | ||||||    
T  25536340 ttcataaactaccttaaaaa-tttataaataatacataaaaacttattt 25536293  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 30094676 - 30094712
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  30094676 cttatgcaaataaataagcttttatcttaattcataa 30094712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 48949795 - 48949752
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataat 267  Q
    |||||||||||||||||||||||| |||||||  |||||||||||    
T  48949795 ataaactgttttttcataaactaccttaaaaa-cttataaataat 48949752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 49104316 - 49104356
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||| ||||||||||| ||||||| ||||||||||||||||    
T  49104316 ttatgcaaataaataaatttttatgttaattcataaattct 49104356  T

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Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 26206365 - 26206453
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataaactctaaaataagctaat 307  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||    ||||||||||||||||||||||||||||| ||||    
T  26206365 ataaactgttttttcataaactacgttaacaatcttataaataatacataaagacatatttatttgcataaactctaaaataagataat 26206453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 7148865 - 7148763
Alignment:
Q  205 aaagaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaata 300  Q
    |||||||||| || |||||||| ||||||||||| ||||||| || | ||| |||| |||||||||||||    ||||||||||||||| ||| ||||||    
T  7148865 aaagaaaattgtatttttataagctgttttttcaaaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaata 7148766  T
Q  301 agc 303  Q
    |||    
T  7148765 agc 7148763  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 48721972 - 48721901
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    |||| |||||| | ||||||||||||||||| |||||| ||||||||||| |||| | ||||||||||||||    
T  48721972 ttataaaaaataatttatacaaataaataagcttttatattaattcataagttctcactaacaaaaattata 48721901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 2141716 - 2141625
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaattca 310  Q
    |||||||||||||| ||||  ||| |||| ||  |||||||||| |||||||    ||||||||||||||| ||||||||||||||||||||    
T  2141716 ataaactgtttttttataatataccttaacaaagttataaataacacataaaagcttatttatttgcataagctctaaaataagctaattca 2141625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 4331483 - 4331430
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaatt 169  Q
    |||||||||||| ||||||  |||||||||||||||||| ||||||||||||||    
T  4331483 tttatgaaaaataacttatgtaaataaataagtttttatgttaattcataaatt 4331430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 4603343 - 4603412
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  4603343 ataaactgttttttcataaactaccttaaaaa-attataaataatacataaaaacttatttatttgcataa 4603412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 46175990 - 46176059
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||||||    |||||||||||||||    
T  46175990 ataaactattttttcataaactaccttaaaaa-tttataaataatacataaaaacttatttatttgcataa 46176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 15184621 - 15184562
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  15184621 ataaactgttttttcataaactactttaaaaa-attataaataatacataaaaacttattt 15184562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 17222981 - 17222913
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| ||||||||||||||||||| ||||||||||| |||| | |||| ||||||    
T  17222981 ttatgaaaaatagcttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaatt 17222913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 310
Target Start/End: Original strand, 52274131 - 52274222
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaattca 310  Q
    |||| |||||||||| |||||||| || | ||| |||| |||||||||||||    ||||||||||||||| ||| ||||||||| ||||||    
T  52274131 ataagctgttttttcgtaaactaccttgataagcttatcaataatacataaaagtttatttatttgcataagctcaaaaataagccaattca 52274222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 4398225 - 4398262
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataata 268  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4398225 ttttttcataaactacattaaaaaatttataaataata 4398262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 14987533 - 14987602
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||   |||||| |||||||||||||||||| ||||||||||| |||| | |||| ||||||    
T  14987533 tttatgaaaaacagcttatataaataaataagtttttatattaattcataagttctcactaacgaaaatt 14987602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 22303163 - 22303098
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaact 292  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||    ||||||||||||||||||    
T  22303163 gttttttcataaactacgtaaaaaa-tttataaataatacataaaaacttatttatttgcataaact 22303098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 55638089 - 55638174
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataag 302  Q
    |||||||||||||||||||||||||| ||| | ||  |||| |||||||||||||    | |||||||||||||||| |||||||||    
T  55638089 tttataaactgttttttcataaactatatttacaaacttatgaataatacataaaagcttgtttatttgcataaact-taaaataag 55638174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 897044 - 896975
Alignment:
Q  224 taaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||| ||||||||||||||||||||| | ||| |||| |||||||||||||    |||||||||||||||    
T  897044 taaattgttttttcataaactacattgacaagcttatgaataatacataaaagtttatttatttgcataa 896975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 8130631 - 8130563
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||| | ||||||||||||||||||| ||||||||||| || | | |||||||||||    
T  8130631 ttatgaaaaatagcttgtgcaaataaataagtttttatgttaattcataagttttcactaacaaaaatt 8130563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 10046322 - 10046250
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaatattta 280  Q
    ||||||| || ||| |||| ||||||||| |||||||||||| | ||||||||| |||||||| ||| |||||    
T  10046322 gaaaattgtattttcataacctgtttttttataaactacattgacaagtttatagataatacaaaaaaattta 10046250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 29877791 - 29877723
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||| ||||| |||||| ||||||||||| |||| | |||||||||||    
T  29877791 ttatgaaaaatagcttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaaatt 29877723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 48591358 - 48591426
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| |||||  ||||||||||| |||| |||||| ||||||    
T  48591358 ttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaatt 48591426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 18630829 - 18630883
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| ||||    
T  18630829 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttct 18630883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 19725383 - 19725317
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    ||||||||||  || ||| |||||||||||||||| ||| |||| ||  ||||||||||||||||||    
T  19725383 gaaaattatatcttcatagactgttttttcataaaataccttaacaaacttataaataatacataaa 19725317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 22397322 - 22397376
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||| |||| |   ||||||||||||||| |||||||||||    
T  22397322 tgttttttcataaactaccttaacagacttataaataatacattaatatttattt 22397376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 38876056 - 38876114
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttatt 175  Q
    |||||||||||  ||||| |||||||||||  |||||| ||||||||||||| ||||||    
T  38876056 ttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataaatgcttatt 38876114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 43983390 - 43983477
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    |||||||  |||||||| ||||||||  |||| ||| ||||||||||||||| ||    |||||||||| |||| |||||||||||||    
T  43983390 tttataagttgtttttttataaactatcttaacaagcttataaataatacattaatgcttatttatttgtataagctctaaaataagc 43983477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 46704204 - 46704258
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||| |||||| ||||||| ||| ||||||| ||||||||||| ||||    
T  46704204 ttatgaaaaataacttatgcaaataagtaactttttatattaattcataagttct 46704258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 47202893 - 47202831
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    |||||||||||||||    
T  47202893 gttttttcataaactaccttaaaaa-tttataagtaatacataaaaacttatttatttgcataa 47202831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 212965 - 213028
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaa---tatttatttgcataa 289  Q
    |||||||||||||||||| |||| ||| |||| ||||||| |||||   |||||||||||||||    
T  212965 tgttttttcataaactaccttaacaagcttatgaataataaataaaacttatttatttgcataa 213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 9201802 - 9201753
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||||| ||||||  |||||||||||||||||| |||||| ||||    
T  9201802 ttatgaaaaataacttatgtaaataaataagtttttattttaatttataa 9201753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 22117420 - 22117359
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  22117420 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataa 22117359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30956836 - 30956787
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||  ||||| ||||||||||||||||||  |||||||||||    
T  30956836 ttatgaaaaatagcttatgcaaataaataagtttttacattaattcataa 30956787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 39932765 - 39932835
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||| |||||||||||| ||||| |||| ||  ||||||||||||||||||    |||||||||||||||    
T  39932765 ataaattgttttttcatacactaccttaacaatcttataaataatacataaaagtttatttatttgcataa 39932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 42617241 - 42617310
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||| |||||||||||||||| |||||||  ||||||||||||| ||||    |||||||||||||||    
T  42617241 ataaactattttttcataaactaccttaaaaa-cttataaataatacttaaaaacgtatttatttgcataa 42617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 43213452 - 43213497
Alignment:
Q  120 tgaaaaatgacttatacaaataaataagtttttatcttaattcata 165  Q
    |||||||| |||||| ||||||||||| ||||||| ||||||||||    
T  43213452 tgaaaaataacttatgcaaataaataaatttttatgttaattcata 43213497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 46650349 - 46650275
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaa 290  Q
    |||||||||| ||||||||||||||||| | | || ||||| |||||||||| ||    ||||||||||||||||    
T  46650349 tttataaactattttttcataaactacaattacaaatttatgaataatacatgaaagcttatttatttgcataaa 46650275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 19298065 - 19298136
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaata--agtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||||  |||||  |||||||||  || |||||| |||||| ||||||||| |||||||||||||    
T  19298065 tttatgaaaaatagcttatgtaaataaatataagcttttattttaatttataaattctcattaacaaaaatt 19298136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 23297587 - 23297519
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| ||||||  |||||||||| ||||   |||||||||||    
T  23297587 ttatgaaaaatagcttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaatt 23297519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 27368160 - 27368233
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||| ||||||| | ||  |||| ||||||| |||||    |||||||||||||||    
T  27368160 tttataaactgttttttcataagctacattgacaaacttatgaataatatataaaagcttatttatttgcataa 27368233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 29032590 - 29032682
Alignment:
Q  211 aattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacata-aatatttatttgcataaactctaaaataag 302  Q
    ||||||| | ||||||| | |||||||||||||||| ||    | |||||||||||||||||   |||||||||||||||| | |||||||||    
T  29032590 aattatattattataaattattttttcataaactacgttgtcgaatttataaataatacatagtttatttatttgcataaattttaaaataag 29032682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 29044712 - 29044804
Alignment:
Q  211 aattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacata-aatatttatttgcataaactctaaaataag 302  Q
    ||||||| | ||||||| | |||||||||||||||| ||    | |||||||||||||||||   |||||||||||||||| | |||||||||    
T  29044712 aattatattattataaattattttttcataaactacgttgtcgaatttataaataatacatagtttatttatttgcataaattttaaaataag 29044804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 43415300 - 43415360
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||| ||||||||| ||||||||||||| ||  |||| ||||||||||||| | ||||||    
T  43415300 ataaattgttttttcgtaaactacattaacaaccttatgaataatacataaaaacttattt 43415360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 43699396 - 43699432
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  43699396 cttatgcaaataaataagtttttatgttaattcataa 43699432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 44490604 - 44490560
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaatt 161  Q
    ||||||||||| | ||||| |||||||||||||||||| ||||||    
T  44490604 ttatgaaaaataatttatagaaataaataagtttttattttaatt 44490560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 48667820 - 48667768
Alignment:
Q  119 atgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||||||||  ||||| |||||||||||| |||||| ||||||||||| ||||    
T  48667820 atgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttct 48667768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 52700555 - 52700615
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||| ||||||||||||| || || | ||| |||||||||||||||||| | ||||||    
T  52700555 ataaactattttttcataaaccacttttacaagcttataaataatacataaagacttattt 52700615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 12238501 - 12238578
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| ||    ||||||||||||||| |||||||||||||    
T  12238501 gttttttcataaactaccttaacaagcttataaataatacattaatgcttatttatttgcataagctctaaaataagc 12238578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 27931544 - 27931482
Alignment:
Q  209 aaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacat 271  Q
    |||||||||| |||||||  |||||||||||||| | |||||| |||||||||||||||||||    
T  27931544 aaaattatacctttataagttgttttttcataaatttcattaacaagtttataaataatacat 27931482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 2757084 - 2757150
Alignment:
Q  225 aaactgttttttcataaactacattaaaaagtttataaataatacataaa---tatttatttgcataa 289  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||||   |||||||||||||||    
T  2757084 aaactgttttttcataaactactttaaaaa-cttataaataatacataaaacttatttatttgcataa 2757150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 35515428 - 35515501
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattatac 189  Q
    |||||||||||   ||||||||||||||||| |||||||||||||||||||| ||| | |||  ||||||||||    
T  35515428 tttatgaaaaagagcttatacaaataaataaatttttatcttaattcataaactctcactaatgaaaattatac 35515501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 22422182 - 22422254
Alignment:
Q  225 aaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactct 294  Q
    |||||||||||||||||||||| |||||||  |||||||||||| |||||    ||||||||||||||||||||    
T  22422182 aaactgttttttcataaactaccttaaaaa-cttataaataatatataaaaacttatttatttgcataaactct 22422254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 27880993 - 27881078
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||| |||||||| ||||| ||||||||||||| |||| |||| ||  |||||||||||||||||    ||||||||||||||||    
T  27880993 gaaaagtatactttcataaattgttttttcataagctaccttaataaacttataaataatacataataacatatttatttgcataa 27881078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 38471725 - 38471793
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||  |||||||||||||||||| || |||||||||||||||| |||| | |||| ||||||    
T  38471725 ttatgaaaaagaacttatacaaataaataaattgttatcttaattcataagttctcactaacgaaaatt 38471793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 38471787 - 38471872
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||| ||| || |||||||||||||||||||||||||| || ||| ||||| |||| ||||||    ||||||||||||||||    
T  38471787 gaaaattgtaccttcataaactgttttttcataaactacatcaagaagcttatacataacacataaaagcatatttatttgcataa 38471872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 15155887 - 15155837
Alignment:
Q  224 taaactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    |||| |||||||||||||||| |||||| ||| ||||||||||||||||||    
T  15155887 taaattgttttttcataaacttcattaacaagattataaataatacataaa 15155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 15155945 - 15155904
Alignment:
Q  137 aaataaataagtttttatcttaattcataaattcttattaac 178  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  15155945 aaataaataagtttttatcttaattcataagttctcattaac 15155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 21788609 - 21788560
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||||| |||||| |||||||||||| |||||| |||||||||||    
T  21788609 ttatgaaaaataacttatgcaaataaataagcttttatattaattcataa 21788560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 289
Target Start/End: Original strand, 22898376 - 22898437
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    |||||||||||||||    
T  22898376 ttttttcataaactaccttaaaaa-tttataaataatacataaaaatgtatttatttgcataa 22898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 32366224 - 32366155
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||||| || ||||  ||||||||||||||||||    |||||||||||||||    
T  32366224 ataaactgttttttcataaactacctttaaaa-cttataaataatacataaaaacttatttatttgcataa 32366155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 32522060 - 32522116
Alignment:
Q  226 aactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  32522060 aactgttttttcataaactaccttaaaaa-attataaataatacataaaaacttattt 32522116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 4027077 - 4027009
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| | |||| ||||||||||| |||| | |||||||||||    
T  4027077 ttatgaaaaatagcttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaatt 4027009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 23956211 - 23956266
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||| ||||||||||||||||||| |||||| |||| |||| |||||| ||||||    
T  23956211 cttatgcaaataaataagtttttatgttaatttataagttctcattaacgaaaatt 23956266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 27880945 - 27881004
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattatact 190  Q
    |||| ||||||||||| ||||||||||||||||||| || | |||||| |||| ||||||    
T  27880945 ttatgcaaataaataaatttttatcttaattcataagttttcattaacgaaaagtatact 27881004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 39070902 - 39070843
Alignment:
Q  209 aaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataata 268  Q
    ||||||||| ||||||||  | |||||||||||||||  |||||||| ||||||||||||    
T  39070902 aaaattatatttttataagatattttttcataaactatcttaaaaagcttataaataata 39070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 736053 - 735991
Alignment:
Q  209 aaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacat 271  Q
    |||||||||  || ||||||| ||||||||||||| || |||| ||| |||||||||||||||    
T  736053 aaaattatatcttcataaactattttttcataaaccaccttaacaagcttataaataatacat 735991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 27931603 - 27931535
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattatac 189  Q
    |||||||||| || |||| |||||||||||| ||||||||||||||   |||| ||| |||||||||||||||    
T  27931603 ttatgaaaaa-gagttatgcaaataaataagcttttatcttaattc---aatttttaataacaaaaattatac 27931535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 38010604 - 38010677
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataag--tttttatcttaattcataaattcttattaacaaaaattata 188  Q
    |||||||||||  ||||||||||||||||||  ||||| | ||||||||||| || | | ||||||||||||||    
T  38010604 ttatgaaaaatagcttatacaaataaataagtttttttttgttaattcataagttttcactaacaaaaattata 38010677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 38216086 - 38216028
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaatatttatttgcataa 289  Q
    ||||||| |||||||| || | ||| |||| |||||||||||| |||||||||||||||    
T  38216086 ttttttcctaaactaccttgacaagcttatgaataatacataattatttatttgcataa 38216028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 42064990 - 42064936
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaat 184  Q
    ||||| |||||||||||| |||||| ||||||||||| |||||| |||| |||||    
T  42064990 cttatgcaaataaataagcttttatattaattcataagttcttactaacgaaaat 42064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 736094 - 736045
Alignment:
Q  139 ataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    |||||||||||||||| |||||| |||| |||| | ||||||||||||||    
T  736094 ataaataagtttttatgttaatttataagttctcaataacaaaaattata 736045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 8441536 - 8441478
Alignment:
Q  235 ttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||||||||||||| ||  |||||||||||||||||    ||||||||||||||||    
T  8441536 ttcataaactacattaacaaacttataaataatacataaaaacatatttatttgcataa 8441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 8832609 - 8832560
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    |||||||||||  ||||| |||||||||||| |||||| |||||||||||    
T  8832609 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataa 8832560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 24439097 - 24439036
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttat 281  Q
    |||||||  ||||||||||||||||||  ||| ||| ||||||||||||||| ||| |||||    
T  24439097 tttataagttgttttttcataaactaccgtaacaagattataaataatacattaatgtttat 24439036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 26440245 - 26440196
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||||| ||||||  |||||||||||||||||| |||||| ||||    
T  26440245 ttatgaaaaataacttatgtaaataaataagtttttattttaatttataa 26440196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 37420058 - 37420009
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||||||||| | |||| |||||||||||| |||||| |||||||||||    
T  37420058 ttatgaaaaataatttatgcaaataaataagcttttatgttaattcataa 37420009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 4004884 - 4004811
Alignment:
Q  233 ttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataag 302  Q
    |||||||||||||| |||||||| |||| |||| ||||||||    |||||||||||||||  || ||||||||    
T  4004884 ttttcataaactactttaaaaagcttatgaatagtacataaaagattatttatttgcataagttcaaaaataag 4004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 7480847 - 7480887
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||| ||||||||||||||||||| ||||||||||| ||||    
T  7480847 ttatgcaaataaataagtttttatgttaattcataagttct 7480887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 8441596 - 8441556
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattct 171  Q
    |||| |||||||||||||||| || ||||||||||||||||    
T  8441596 ttatgcaaataaataagttttaattttaattcataaattct 8441556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 9140741 - 9140809
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcata 288  Q
    ||||||||||||| ||||||||||||| | ||||||||  ||||||||||||    ||||||||||||||    
T  9140741 ataaactgtttttacataaactacattgacaagtttat-gataatacataaaaggttatttatttgcata 9140809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 19683724 - 19683656
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||| ||||||  ||||| ||||| |||||| |||||| |||| || ||| |||||||||||    
T  19683724 ttatgaaaaataacttatgtaaatagataaggttttattttaatttataagtttttactaacaaaaatt 19683656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 23756480 - 23756408
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattata 188  Q
    ||||| |||||| | |||| ||||||||| | ||||||| |||||| |||| || | ||||||||||||||||    
T  23756480 tttattaaaaatcatttatgcaaataaatgaatttttatgttaatttataagttttcattaacaaaaattata 23756408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 5610596 - 5610532
Alignment:
Q  210 aaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    ||||| ||| || ||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  5610596 aaattttaccttcataaactatttttttataaactacattaaaaagcttataaataatacataaa 5610532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 20169342 - 20169269
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||    |||||||||||||||    
T  20169342 tttataaactgttttttcataaactatatttaaaaacttataaataatacataaaagcttatttatttgcataa 20169269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 42367102 - 42367035
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  42367102 ttatgaaaaatagcttatgcaaataaataagttcttatgttaattcat-aattcttattaacaaaaatt 42367035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 34265638 - 34265584
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||| |||| || |||||||||||||||| |||||||||||    
T  34265638 tgttttttcataaactaccttaacaaatttataaataatacattaatatttattt 34265584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 41196721 - 41196787
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttatttgcataa 289  Q
    |||| |||||||||||||||||||||| | ||| |||| ||||||||||||| | ||||||||||||    
T  41196721 ataagctgttttttcataaactacattgacaagcttatgaataatacataaaaacttatttgcataa 41196787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 32497283 - 32497352
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  32497283 ataaactgttttttcataaactaccttaaaaa-cttataaataatacataaaaacttatttatttgcataa 32497352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 49971321 - 49971256
Alignment:
Q  228 ctgttttttcataaactacattaaaaagtttataaataatacata----aatatttatttgcataa 289  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||    |||||||||||||||||    
T  49971321 ctgttttttcataaactacattaacaagcttataaataataaataaaggaatatttatttgcataa 49971256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 12256745 - 12256690
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||| |||| ||||||    
T  12256745 cttatacaaataaataaatttttattttaattcataagttcttactaacgaaaatt 12256690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 15631994 - 15631919
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    ||||||| || ||| |||||| ||||||||||||| |||||||| ||  |||||||||||||||||| | ||||||    
T  15631994 gaaaattgtattttcataaacagttttttcataaaatacattaacaaacttataaataatacataaaaacttattt 15631919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 37329423 - 37329507
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    |||| ||||||||||||||||||| || | |||||||| |||||||||||||     |||||||||||||| ||| |||||||||    
T  37329423 ataagctgttttttcataaactaccttgacaagtttatgaataatacataaaagctcatttatttgcataatctcaaaaataagc 37329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 6337767 - 6337850
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataag 302  Q
    |||| ||||||||||||||||||| || | ||| |||| |||||||||||||    ||||||||| ||||| ||||||||||||    
T  6337767 ataagctgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagctctaaaataag 6337850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 8410211 - 8410133
Alignment:
Q  235 ttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagctaattca 310  Q
    |||||||||||| ||||||| || || |||||||||||||    ||||||||||||||  ||||||||||||||||||||    
T  8410211 ttcataaactactttaaaaactt-atgaataatacataaaaacttatttatttgcataggctctaaaataagctaattca 8410133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 9572718 - 9572784
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaa 183  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||| | |||||||||    
T  9572718 ttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaa 9572784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 48819451 - 48819385
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaa 183  Q
    |||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||| | |||||||||    
T  48819451 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaa 48819385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 10850000 - 10850068
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||| ||||||||||||||||||| ||| || |||||| |||| || | |||||| ||||||    
T  10850000 ttatgaaaaataacttatacaaataaataagctttcatgttaatttataagttttcattaacgaaaatt 10850068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 17628436 - 17628495
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||| ||||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  17628436 ataaacggttttttcataaactaccttaaaaa-cttataaataatacataaaaacttattt 17628495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 26543063 - 26542978
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactacattaaaaagtttataaataatacataa----atatttatttgcataa 289  Q
    ||||||| ||||||  |||  ||||||||||||||||||||||| ||  ||||| |||||||||||    ||||||||||||||||    
T  26543063 gaaaattgtactttcttaagttgttttttcataaactacattaacaaacttatatataatacataaaagcatatttatttgcataa 26542978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 34265708 - 34265656
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaa 182  Q
    |||||||||||||||||||||| || |||||| ||||  ||||||||||||||    
T  34265708 cttatacaaataaataagttttaatgttaatttataagatcttattaacaaaa 34265656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 36259299 - 36259362
Alignment:
Q  220 tttataaactgttttttcataaactaca-ttaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||||||||||||||| ||| |||| |||  ||||||||||||| ||||||||    
T  36259299 tttataaactgttttttcataaactacacttacaaag-ttaagaataatacataaaaatttattt 36259362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 46263536 - 46263484
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaa 182  Q
    ||||||||||||||||| ||||||| |||||| ||||  ||||||||||||||    
T  46263536 cttatacaaataaataaatttttatattaatttataagatcttattaacaaaa 46263484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 46473232 - 46473180
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaa 183  Q
    |||| |||||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  46473232 ttatgcaaataaataagattttatattaattcataagttcttattaacgaaaa 46473180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 13412471 - 13412521
Alignment:
Q  230 gttttttcataaactacattaaaaagtttataaataatacataaatatttat 281  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| ||||||    
T  13412471 gttttttcataaactaccttaaaaa-cttataaataatacataaaaatttat 13412521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 35282611 - 35282675
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||||| |||| | |||||||||||||| |||||    |||||||||||||||    
T  35282611 tgttttttcataaactaccttaacatgtttataaataataaataaacgcttatttatttgcataa 35282675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 1683897 - 1683935
Alignment:
Q  208 gaaaattatacttttataaactgttttttcataaactac 246  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  1683897 gaaaattgtagttttataaactgttttttcataaactac 1683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 14862986 - 14862936
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||| |||||| || |||| |||||||||||||||||| |||||||||||    
T  14862986 tttataaaaaataacatatataaataaataagtttttatgttaattcataa 14862936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 14868538 - 14868488
Alignment:
Q  116 tttatgaaaaatgacttatacaaataaataagtttttatcttaattcataa 166  Q
    ||||| |||||| || |||| |||||||||||||||||| |||||||||||    
T  14868538 tttataaaaaataacatatataaataaataagtttttatgttaattcataa 14868488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 15515366 - 15515441
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataag 302  Q
    |||||||||||||||| || | ||| |||| |||||||||||||    |||||||| |||||||||| ||||||||    
T  15515366 ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttattagcataaactcaaaaataag 15515441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 37329346 - 37329400
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattct 171  Q
    ||||||||||| |||||| |||||||||||| |||||| |||||| |||| ||||    
T  37329346 ttatgaaaaataacttatgcaaataaataagcttttatgttaatttataagttct 37329400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 5243415 - 5243484
Alignment:
Q  223 ataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    ||||||| |||||||||||||||| |||||||  |||||||||||||| |||    |||||||||||||||    
T  5243415 ataaactattttttcataaactaccttaaaaa-cttataaataatacacaaaaacttatttatttgcataa 5243484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 5347221 - 5347160
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  5347221 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataa 5347160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 17814257 - 17814196
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataa 289  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    |||||||||||||||    
T  17814257 ttttttcataaactaccttaaaaa-cttataaataatacataaaaatgtatttatttgcataa 17814196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 15791450 - 15791399
Alignment:
Q  231 ttttttcataaactacattaaaaagtttataaataatacataaatatttattt 283  Q
    |||||||||||||||| |||||||  |||||||||||||||||| | ||||||    
T  15791450 ttttttcataaactaccttaaaaa-cttataaataatacataaaaacttattt 15791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 23368956 - 23368988
Alignment:
Q  122 aaaaatgacttatacaaataaataagtttttat 154  Q
    ||||| |||||||||||||||||||||||||||    
T  23368956 aaaaaagacttatacaaataaataagtttttat 23368988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 28690156 - 28690088
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    |||||||||||  ||||| |||||||||||| |||||| |||||||| || |||| | ||| |||||||    
T  28690156 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcagaatttctcactaataaaaatt 28690088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 42363672 - 42363624
Alignment:
Q  226 aactgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    |||||||||||||| ||||  ||||| ||| ||||||||||||||||||    
T  42363672 aactgttttttcattaactttattaacaagcttataaataatacataaa 42363624  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 46689484 - 46689552
Alignment:
Q  117 ttatgaaaaatgacttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||||||||| |||||| |||||||||||  | |||| ||||||||||| |||| | |||| ||||||    
T  46689484 ttatgaaaaataacttatgcaaataaataaactattatattaattcataagttctcactaacgaaaatt 46689552  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 47413460 - 47413400
Alignment:
Q  210 aaattatacttttataaactgttttttcataaactacattaaaaagtttataaataataca 270  Q
    ||||||||  || |||| ||||| |||||||||||||||| | ||| ||||||||||||||    
T  47413460 aaattatatcttcataacctgttatttcataaactacattgacaagcttataaataataca 47413400  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 49822868 - 49822836
Alignment:
Q  137 aaataaataagtttttatcttaattcataaatt 169  Q
    |||||||||||||||||| ||||||||||||||    
T  49822868 aaataaataagtttttattttaattcataaatt 49822836  T

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Target: scaffold0332 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 14754 - 14841
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaa----tatttatttgcataaactctaaaataagc 303  Q
    ||||||||||| |||||||||||||||||| ||||  |||| |||||||||||||    |||||||||| |||| ||| |||||||||    
T  14754 tttataaactgatttttcataaactacatttaaaaacttatgaataatacataaaagcttatttatttgtataagctcaaaaataagc 14841  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 279000 - 279060
Alignment:
Q  220 tttataaactgttttttcataaactacattaaaaagtttataaataatacataaatatttat 281  Q
    ||||||||  ||||||||||||||||| |||||||  |||||||||||||||||| ||||||    
T  279000 tttataaatggttttttcataaactaccttaaaaa-cttataaataatacataaaaatttat 279060  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 48575 - 48630
Alignment:
Q  130 cttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaatt 185  Q
    ||||| |||||||||||| |||||| ||||||||||| |||  |||||||||||||    
T  48575 cttatgcaaataaataagcttttatgttaattcataagttcccattaacaaaaatt 48630  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 2509 - 2567
Alignment:
Q  131 ttatacaaataaataagtttttatcttaattcataaattcttattaacaaaaattatac 189  Q
    ||||| |||||||||||||||||  |||||||||||  ||||| |||| ||||||||||    
T  2509 ttatataaataaataagtttttaaattaattcataagatcttactaacgaaaattatac 2567  T

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Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 2623 - 2673
Alignment:
Q  256 tttataaataatacataaata----tttatttgcataaactctaaaataag 302  Q
    |||||||||||||||| ||||    ||||||||||||||||||||||||||    
T  2623 tttataaataatacattaatacttctttatttgcataaactctaaaataag 2673  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 142408 - 142363
Alignment:
Q  229 tgttttttcataaactacattaaaaagtttataaataatacataaa 274  Q
    |||||||||||||| |||||||| |||| ||| |||||||||||||    
T  142408 tgttttttcataaattacattaataagtatatgaataatacataaa 142363  T

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