View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5803_low_21 (Length: 298)
Name: NF5803_low_21
Description: NF5803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5803_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 17 - 284
Target Start/End: Original strand, 6162969 - 6163236
Alignment:
| Q |
17 |
atattttctaagaagaatagaggttataagttctaacaaagtatatagagcatagtgaaccaaacaagcaatcattttctatccattgtaagtctgtaac |
116 |
Q |
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| T |
6162969 |
atattttctaagaagaatagaggttataagttctaacaaagtatatagagcatagtgaaccaaacaagcaatcattttctatccattgtaagtctgtaac |
6163068 |
T |
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| Q |
117 |
aaaactacattatatccaccatcttttaacatttttccttcaccaacaacaccttcaacttcaagcaaaaatataaaacaaaataaactagaaactcatt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6163069 |
aaaactacattatatccaccatcttttaacatttttccttcaccaacaacaccttcaacttcaagcaaaaatataaaacaaaataaactagaaactcatt |
6163168 |
T |
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| Q |
217 |
tgttaggttaccctagagaaaccctagctagatcaacatactacttaccttcacgttcaccttataat |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6163169 |
tgttaggttaccctagagaaaccctagctagatcaacatactacttaccttcacgttcaccttataat |
6163236 |
T |
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