View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5803_low_22 (Length: 293)

Name: NF5803_low_22
Description: NF5803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5803_low_22
NF5803_low_22
[»] chr4 (36 HSPs)
chr4 (18-215)||(47282422-47282618)
chr4 (213-283)||(45747794-45747864)
chr4 (207-283)||(48518883-48518959)
chr4 (209-283)||(41859041-41859115)
chr4 (214-283)||(40435907-40435976)
chr4 (214-283)||(48879332-48879401)
chr4 (211-283)||(27555417-27555489)
chr4 (215-283)||(27762899-27762967)
chr4 (211-283)||(39730289-39730361)
chr4 (209-283)||(43723271-43723345)
chr4 (214-283)||(6279920-6279989)
chr4 (214-283)||(23686794-23686863)
chr4 (210-283)||(25932448-25932521)
chr4 (214-283)||(35999693-35999762)
chr4 (213-274)||(55967998-55968059)
chr4 (214-274)||(25916034-25916094)
chr4 (215-283)||(34049597-34049665)
chr4 (212-283)||(18405231-18405302)
chr4 (212-283)||(42773955-42774026)
chr4 (212-274)||(39498841-39498903)
chr4 (212-274)||(39502180-39502242)
chr4 (214-283)||(39835306-39835375)
chr4 (215-283)||(13229989-13230057)
chr4 (219-283)||(27942750-27942814)
chr4 (211-283)||(45596275-45596347)
chr4 (212-283)||(936133-936204)
chr4 (212-283)||(18931760-18931831)
chr4 (215-282)||(32953531-32953598)
chr4 (219-274)||(34237424-34237479)
chr4 (216-283)||(47670369-47670436)
chr4 (217-283)||(41744222-41744288)
chr4 (214-270)||(30415922-30415978)
chr4 (227-283)||(8322252-8322308)
chr4 (214-283)||(50672907-50672973)
chr4 (220-283)||(10400810-10400873)
chr4 (211-261)||(26165393-26165443)
[»] scaffold0006 (2 HSPs)
scaffold0006 (210-283)||(201928-202001)
scaffold0006 (221-266)||(143633-143678)
[»] chr7 (38 HSPs)
chr7 (210-283)||(33378845-33378918)
chr7 (212-283)||(48314125-48314196)
chr7 (209-274)||(9814212-9814277)
chr7 (212-283)||(11329996-11330067)
chr7 (212-283)||(27248296-27248367)
chr7 (213-283)||(45045629-45045699)
chr7 (213-283)||(48160589-48160659)
chr7 (214-283)||(8419588-8419657)
chr7 (214-283)||(27213854-27213923)
chr7 (214-283)||(39554186-39554255)
chr7 (218-283)||(48341365-48341430)
chr7 (215-283)||(38544197-38544265)
chr7 (215-283)||(40212892-40212960)
chr7 (212-283)||(9946987-9947058)
chr7 (216-283)||(43949248-43949315)
chr7 (213-283)||(35488187-35488257)
chr7 (214-283)||(25924636-25924705)
chr7 (214-283)||(27419223-27419292)
chr7 (216-283)||(45265049-45265116)
chr7 (210-283)||(41632359-41632432)
chr7 (211-283)||(16825350-16825422)
chr7 (219-283)||(38396370-38396434)
chr7 (215-283)||(44566048-44566116)
chr7 (212-283)||(28904183-28904254)
chr7 (211-282)||(45723211-45723282)
chr7 (214-279)||(25098076-25098141)
chr7 (216-283)||(34930466-34930534)
chr7 (219-273)||(45448955-45449009)
chr7 (217-277)||(44820263-44820323)
chr7 (212-265)||(11000724-11000777)
chr7 (213-266)||(41684020-41684073)
chr7 (211-283)||(25045614-25045685)
chr7 (215-261)||(45440933-45440979)
chr7 (214-266)||(18824166-18824218)
chr7 (214-281)||(31921747-31921813)
chr7 (217-283)||(6656226-6656292)
chr7 (216-261)||(30685993-30686038)
chr7 (217-261)||(37534105-37534149)
[»] chr3 (28 HSPs)
chr3 (211-283)||(40908268-40908340)
chr3 (209-283)||(11239114-11239188)
chr3 (214-283)||(24574578-24574647)
chr3 (214-283)||(26849025-26849094)
chr3 (213-283)||(44952311-44952381)
chr3 (215-283)||(6231501-6231569)
chr3 (215-283)||(28124436-28124504)
chr3 (215-274)||(9320448-9320507)
chr3 (212-283)||(20297796-20297867)
chr3 (214-280)||(8476307-8476373)
chr3 (219-283)||(33217917-33217981)
chr3 (215-283)||(47114857-47114925)
chr3 (214-283)||(20414464-20414533)
chr3 (210-283)||(48339752-48339825)
chr3 (212-283)||(31435920-31435991)
chr3 (211-274)||(43715304-43715367)
chr3 (217-283)||(1099201-1099267)
chr3 (212-283)||(43132154-43132225)
chr3 (234-283)||(31611004-31611053)
chr3 (214-266)||(45826796-45826848)
chr3 (213-270)||(55435390-55435447)
chr3 (223-283)||(53165733-53165793)
chr3 (214-261)||(29512704-29512751)
chr3 (240-274)||(9320405-9320439)
chr3 (212-261)||(6831954-6832003)
chr3 (230-283)||(10822733-10822786)
chr3 (215-283)||(12228256-12228324)
chr3 (214-266)||(28770209-28770261)
[»] chr1 (38 HSPs)
chr1 (212-283)||(2430500-2430571)
chr1 (208-283)||(3572558-3572633)
chr1 (211-283)||(1597338-1597410)
chr1 (212-283)||(6978774-6978845)
chr1 (213-283)||(9115841-9115911)
chr1 (214-283)||(2632856-2632925)
chr1 (218-283)||(36361786-36361851)
chr1 (214-283)||(46666712-46666781)
chr1 (215-283)||(39930461-39930529)
chr1 (211-283)||(52630777-52630849)
chr1 (212-283)||(8332018-8332089)
chr1 (216-283)||(25789767-25789834)
chr1 (212-283)||(39329612-39329683)
chr1 (214-280)||(5806290-5806356)
chr1 (214-283)||(6911497-6911566)
chr1 (214-283)||(47037461-47037530)
chr1 (214-283)||(49822916-49822985)
chr1 (215-283)||(20260086-20260154)
chr1 (217-283)||(9831872-9831938)
chr1 (214-283)||(12190176-12190245)
chr1 (214-283)||(38964678-38964747)
chr1 (215-283)||(14788727-14788795)
chr1 (214-274)||(35187469-35187529)
chr1 (217-283)||(32824926-32824992)
chr1 (214-283)||(4683373-4683442)
chr1 (214-283)||(5518503-5518572)
chr1 (218-283)||(51445083-51445148)
chr1 (214-274)||(32202330-32202390)
chr1 (214-283)||(48916021-48916090)
chr1 (215-270)||(1007764-1007819)
chr1 (217-281)||(50190767-50190831)
chr1 (211-270)||(52699462-52699521)
chr1 (214-265)||(29091688-29091739)
chr1 (224-283)||(37436630-37436689)
chr1 (218-266)||(31806759-31806807)
chr1 (221-283)||(30241013-30241075)
chr1 (221-266)||(13653872-13653917)
chr1 (222-266)||(11014448-11014492)
[»] chr5 (20 HSPs)
chr5 (213-283)||(19065503-19065573)
chr5 (214-283)||(4765559-4765628)
chr5 (214-283)||(12970529-12970598)
chr5 (212-283)||(22935909-22935980)
chr5 (212-283)||(28602558-28602629)
chr5 (214-283)||(555705-555774)
chr5 (214-283)||(14206820-14206889)
chr5 (214-283)||(18412212-18412281)
chr5 (218-283)||(11855658-11855723)
chr5 (214-283)||(29543014-29543083)
chr5 (219-283)||(6091718-6091782)
chr5 (215-283)||(36703877-36703945)
chr5 (214-283)||(27481360-27481429)
chr5 (217-274)||(32535949-32536006)
chr5 (221-282)||(8406898-8406959)
chr5 (210-266)||(42012174-42012230)
chr5 (236-283)||(8646412-8646459)
chr5 (216-266)||(6930664-6930714)
chr5 (217-270)||(20962606-20962659)
chr5 (217-266)||(26637045-26637094)
[»] chr8 (27 HSPs)
chr8 (210-283)||(25837914-25837987)
chr8 (211-283)||(12710648-12710720)
chr8 (215-283)||(18726619-18726687)
chr8 (212-283)||(35818421-35818492)
chr8 (212-283)||(37392543-37392614)
chr8 (212-283)||(38364084-38364155)
chr8 (214-283)||(1554353-1554422)
chr8 (210-283)||(16313502-16313575)
chr8 (214-283)||(32660932-32661001)
chr8 (221-283)||(3050012-3050074)
chr8 (218-283)||(26601941-26602006)
chr8 (215-283)||(10896217-10896285)
chr8 (213-281)||(41228712-41228780)
chr8 (212-283)||(38132734-38132805)
chr8 (216-283)||(42755870-42755937)
chr8 (214-283)||(26062147-26062216)
chr8 (215-283)||(18298115-18298183)
chr8 (219-274)||(7931251-7931306)
chr8 (215-274)||(40197076-40197135)
chr8 (204-268)||(5020479-5020543)
chr8 (214-283)||(7317376-7317445)
chr8 (216-265)||(33444627-33444676)
chr8 (217-256)||(8635664-8635703)
chr8 (217-283)||(21137134-21137200)
chr8 (212-263)||(35394413-35394464)
chr8 (216-261)||(25899657-25899702)
chr8 (222-270)||(41432756-41432804)
[»] chr6 (12 HSPs)
chr6 (214-283)||(7053569-7053638)
chr6 (214-283)||(2657703-2657772)
chr6 (214-283)||(8029336-8029405)
chr6 (215-283)||(1317021-1317089)
chr6 (212-283)||(14171016-14171087)
chr6 (218-283)||(18897924-18897989)
chr6 (209-282)||(7344077-7344150)
chr6 (222-283)||(16968928-16968989)
chr6 (210-283)||(6705760-6705833)
chr6 (215-251)||(10246222-10246258)
chr6 (214-266)||(3869525-3869577)
chr6 (216-266)||(10849784-10849834)
[»] chr2 (38 HSPs)
chr2 (214-283)||(346344-346413)
chr2 (214-283)||(39995130-39995199)
chr2 (210-283)||(42674656-42674729)
chr2 (212-283)||(21737397-21737468)
chr2 (214-283)||(6171794-6171863)
chr2 (214-283)||(11071608-11071677)
chr2 (215-283)||(9733846-9733914)
chr2 (211-283)||(34356696-34356768)
chr2 (214-283)||(5770109-5770178)
chr2 (214-283)||(14777497-14777566)
chr2 (214-283)||(37533955-37534024)
chr2 (211-283)||(4559562-4559634)
chr2 (217-283)||(2050869-2050935)
chr2 (209-283)||(17965986-17966060)
chr2 (213-283)||(20426481-20426551)
chr2 (217-283)||(37192525-37192591)
chr2 (213-283)||(41729128-41729198)
chr2 (214-283)||(2521678-2521747)
chr2 (219-283)||(28311701-28311765)
chr2 (212-283)||(40950856-40950927)
chr2 (216-283)||(41750532-41750599)
chr2 (214-283)||(45409253-45409322)
chr2 (219-283)||(638596-638660)
chr2 (219-283)||(37233432-37233496)
chr2 (220-274)||(26310281-26310335)
chr2 (214-283)||(27357962-27358031)
chr2 (214-283)||(6571690-6571759)
chr2 (218-283)||(13760948-13761013)
chr2 (219-283)||(14832813-14832877)
chr2 (214-261)||(40570045-40570092)
chr2 (210-283)||(1988314-1988387)
chr2 (212-270)||(45694204-45694262)
chr2 (212-277)||(7007582-7007647)
chr2 (218-283)||(18713660-18713725)
chr2 (214-265)||(14403232-14403283)
chr2 (214-261)||(25455049-25455096)
chr2 (230-283)||(14253525-14253578)
chr2 (217-266)||(24499460-24499509)
[»] scaffold0189 (1 HSPs)
scaffold0189 (220-283)||(28957-29020)
[»] scaffold0702 (1 HSPs)
scaffold0702 (212-283)||(3562-3633)
[»] scaffold0662 (1 HSPs)
scaffold0662 (212-283)||(4471-4542)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 3e-88; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 47282422 - 47282618
Alignment:
Q  18 gaaacaactccgactcattggtagctctacgcctaacactgtaaggaacatgatttatgctcttgtgaagacgcgtaatctcatacccgcatagattggt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47282422 gaaacaactccgactcattggtagctctacgcctaacactgtaaggaacatgatttatgctcttgtgaagacgcataatctcatacccgcatagattggt 47282521  T
Q  118 tcgacttacactaatgtccatttaggtgacatnnnnnnnntacaaaagacttgcatggtagctcctgacggtcaagttgcaccctcaacgtcacttag 215  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47282522 tcgacttacactaatgtccatttaggtgacat-gaaaaaatacaaaagacttgcatggtagctcctgacggtcaagttgcaccctcaacgtcacttag 47282618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 45747794 - 45747864
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45747794 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 48518883 - 48518959
Alignment:
Q  207 gtcacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  48518883 gtcactttgggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatg 48518959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 41859041 - 41859115
Alignment:
Q  209 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  41859041 cacttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 41859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 40435976 - 40435907
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  40435976 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 40435907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 48879401 - 48879332
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  48879401 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 48879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 27555489 - 27555417
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||    
T  27555489 cttagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatg 27555417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 27762899 - 27762967
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27762899 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 27762967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 39730289 - 39730361
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||    
T  39730289 cttagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgtctatg 39730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 43723345 - 43723271
Alignment:
Q  209 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||    
T  43723345 cacttagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatg 43723271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 6279920 - 6279989
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  6279920 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatatgaatgtatatgtctatg 6279989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 23686863 - 23686794
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  23686863 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 23686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 25932521 - 25932448
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||    
T  25932521 acttagggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 25932448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 35999762 - 35999693
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  35999762 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 35999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 55967998 - 55968059
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  55967998 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtat 55968059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 25916034 - 25916094
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25916034 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtat 25916094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 34049597 - 34049665
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  34049597 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatg 34049665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 18405231 - 18405302
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||    
T  18405231 ttagggtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatg 18405302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 42774026 - 42773955
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||||    
T  42774026 ttagggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatg 42773955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 39498903 - 39498841
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39498903 ttagggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtat 39498841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 39502242 - 39502180
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39502242 ttagggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtat 39502180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 39835306 - 39835375
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  39835306 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatg 39835375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 13229989 - 13230057
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||    
T  13229989 gggtgtgtttgtttcaagttataattttttattcccgggaataaaatgatagaaatgtatatgcctatg 13230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 27942814 - 27942750
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatg 27942750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 45596347 - 45596275
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||||||    
T  45596347 cttagggtgcgtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatg 45596275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 936204 - 936133
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| | ||||||    
T  936204 ttagggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgattggaatatatatccctatg 936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 18931831 - 18931760
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||    
T  18931831 ttagagtgtgtttgtttcaagttataattgttgatttctgggaataaaatgataggaatgtatatgtctatg 18931760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 32953598 - 32953531
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctat 282  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  32953598 gggtgtgtttgtctcaagttataattgttgattcccaggaacaaaatgataggaatgtatatgcctat 32953531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 34237424 - 34237479
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtat 34237479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 47670436 - 47670369
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||    
T  47670436 ggtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatg 47670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 41744222 - 41744288
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  41744222 gtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 41744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 30415978 - 30415922
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  30415978 agggtgtgtttgtttcaagttatatttgttgattcccgataataaaatgataggaat 30415922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 8322308 - 8322252
Alignment:
Q  227 ttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| || |||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatg 8322252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 50672907 - 50672973
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||| || |||||    
T  50672907 agggtgtgtttgttttaagtta--attgttgattcc-gggaataaaatgataggaatgtatatgtctatg 50672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 10400810 - 10400873
Alignment:
Q  220 tgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||| |||||||||   |||||||||||||||| ||||||| || |||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatg 10400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 26165443 - 26165393
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    |||||||||||||||||||| |||||| |||| |||||| | |||||||||    
T  26165443 cttagggtgtgtttgtttcatgttatatttgtagattcctgagaataaaat 26165393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 202001 - 201928
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  202001 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 201928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 143678 - 143633
Alignment:
Q  221 gtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||| | ||||||||||| | ||||||||||||||    
T  143678 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatag 143633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 33378918 - 33378845
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33378918 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 33378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 48314196 - 48314125
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48314196 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48314125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 9814212 - 9814277
Alignment:
Q  209 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9814212 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 9814277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 11330067 - 11329996
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  11330067 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 27248367 - 27248296
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27248367 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 27248296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 45045699 - 45045629
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45045699 tagggtgtgtttgttttaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 48160589 - 48160659
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  48160589 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 48160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 8419588 - 8419657
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  8419588 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 8419657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 27213854 - 27213923
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27213854 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 27213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 39554255 - 39554186
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  39554255 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39554186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 48341430 - 48341365
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 38544265 - 38544197
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  38544265 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgcctatg 38544197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 40212960 - 40212892
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  40212960 gggtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatg 40212892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 9946987 - 9947058
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  9946987 ttagggtgtgtttgtttaaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatg 9947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 43949315 - 43949248
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  43949315 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 43949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 35488187 - 35488257
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  35488187 tagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 35488257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 25924636 - 25924705
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  25924636 agggtatgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25924705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 27419223 - 27419292
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  27419223 agggtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatg 27419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 45265049 - 45265116
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  45265049 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatg 45265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 41632359 - 41632432
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||    
T  41632359 acttaaggtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatg 41632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 16825350 - 16825422
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||| ||||||||    
T  16825350 cttagggtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatg 16825422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 38396370 - 38396434
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 38396434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 44566116 - 44566048
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||    
T  44566116 gggtgtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatg 44566048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 28904183 - 28904254
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| || |||||    
T  28904183 ttagggtgtgtttgttttaagttataattgttgattcccgagaataaaatgatagaaatgtatatgtctatg 28904254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 45723282 - 45723211
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctat 282  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||    
T  45723282 cttacggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgataggaatatatatgcctat 45723211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 25098141 - 25098076
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcc 279  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  25098141 agggtgtgtttgtttcaagttataatttttgattttcgggaataaaatgataggaatgtatatgcc 25098076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 34930466 - 34930534
Alignment:
Q  216 ggtgtgtttgtttcaa-gttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  34930466 ggtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 34930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 45449009 - 45448955
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgta 273  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgta 45448955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 44820323 - 44820263
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttg 277  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatgatagaaatgtatttg 44820263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 11000777 - 11000724
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgata 265  Q
    ||||||||||||||||||||||||||  |||||||||| || ||||||||||||    
T  11000777 ttagggtgtgtttgtttcaagttatatatgttgattcctggaaataaaatgata 11000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 41684020 - 41684073
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||| |||||||    
T  41684020 tagggtgtgtttgtttcaagttatatttgttgattcctgagaataatatgatag 41684073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 25045614 - 25045685
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||| ||||||||| | ||| |||||| ||||||||| ||| ||| ||||    
T  25045614 cttagggtgtgtttgtttcaagttatatttgttgatt-ctggggataaaaagataggaatatatatgcatatg 25045685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 45440979 - 45440933
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||    
T  45440979 gggtgtgtttgtttcaagttataattgtagattcttgggaataaaat 45440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 18824218 - 18824166
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||||||||| || |||||||||   ||||||||||||||||    
T  18824218 agggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatag 18824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 31921747 - 31921813
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgccta 281  Q
    |||||||||||||||||||||||| ||||| |||  ||| ||||||||||||| ||| ||| ||||||    
T  31921747 agggtgtgtttgtttcaagttatatttgttcatt-tcggaaataaaatgatagaaatatatatgccta 31921813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 6656226 - 6656292
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||| |||||||||   || |||||||||||| |||| ||| | ||||||    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaatgatatgaatatatatacctatg 6656292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 30685993 - 30686038
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||    
T  30685993 ggtgtgtttgtttcaagttataattgtagattcgttggaataaaat 30686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 37534105 - 37534149
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    |||||||||||||| ||||||||||| |||||| || ||||||||    
T  37534105 gtgtgtttgtttcatgttataattgtagattcctggaaataaaat 37534149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 40908340 - 40908268
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40908340 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 40908268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 11239114 - 11239188
Alignment:
Q  209 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  11239114 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 24574647 - 24574578
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24574647 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 24574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 26849094 - 26849025
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26849094 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26849025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 44952381 - 44952311
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  44952381 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 44952311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 6231501 - 6231569
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  6231501 gggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatg 6231569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 28124436 - 28124504
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  28124436 gggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatg 28124504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 9320448 - 9320507
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9320448 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 9320507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 20297867 - 20297796
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  20297867 ttagggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatg 20297796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 8476307 - 8476373
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcct 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  8476307 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcct 8476373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 33217917 - 33217981
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 33217981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 47114857 - 47114925
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  47114857 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 47114925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 20414464 - 20414533
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||||    
T  20414464 agggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatg 20414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 48339752 - 48339825
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  48339752 acttaggatgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatg 48339825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 31435920 - 31435991
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||||||| ||||||||    
T  31435920 ttagggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatg 31435991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 43715304 - 43715367
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  43715304 cttagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtat 43715367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 1099267 - 1099201
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  1099267 gtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatg 1099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 43132154 - 43132225
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||| ||| ||||||||    
T  43132154 ttagggtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatg 43132225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 31611004 - 31611053
Alignment:
Q  234 tataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  31611004 tataattgttgattcccgggaataaaatgattggaatgtatatgtctatg 31611053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 45826848 - 45826796
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||||||||    
T  45826848 agggtgtgtttgtttcaagttatcgttgtagattccagggaataaaatgatag 45826796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 55435390 - 55435447
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    |||||||| |||||||||||||||  |||| ||| || ||||||||||||||||||||    
T  55435390 tagggtgtatttgtttcaagttatttttgtagatacctgggaataaaatgataggaat 55435447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 53165733 - 53165793
Alignment:
Q  223 ttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||||| ||| ||| ||||    
T  53165733 ttgtttcaagttatatttgttgattcccataaataaaatgataggaatatatatgcttatg 53165793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 29512751 - 29512704
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||||    
T  29512751 agggtgtgtttgtttcaagttataatttttaatttctgggaataaaat 29512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 9320405 - 9320439
Alignment:
Q  240 tgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||| |||||||||||||||||||||||||    
T  9320405 tgttgattctcgggaataaaatgataggaatgtat 9320439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 6831954 - 6832003
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    |||||||||||||||||||| ||||| |||| |||||| || ||||||||    
T  6831954 ttagggtgtgtttgtttcaacttatatttgtagattcctggaaataaaat 6832003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 10822733 - 10822786
Alignment:
Q  230 aagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||| ||||||||| |||||||||||||||||| | ||||| || |||||    
T  10822733 aagttatatttgttgatttccgggaataaaatgatagaagtgtatatgtctatg 10822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 12228256 - 12228324
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||| ||  |||| ||||| ||||| | |||||||||||||| ||| ||| ||||||||    
T  12228256 gggtgtgtttgttttaaaatatagttgttaattcctgcgaataaaatgatagaaatatatatgcctatg 12228324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 28770209 - 28770261
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||| |||||||||||| | || |||||| |||||||||| |||||    
T  28770209 agggtgtgtttctttcaagttatattcgtagattcctgggaataaaaagatag 28770261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 2430571 - 2430500
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2430571 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 2430500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 3572558 - 3572633
Alignment:
Q  208 tcacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3572558 tcactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3572633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 1597338 - 1597410
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  1597338 cttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 1597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 6978845 - 6978774
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6978845 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 6978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 9115911 - 9115841
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9115911 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 2632925 - 2632856
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  2632925 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatg 2632856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 36361851 - 36361786
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 36361786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 46666781 - 46666712
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  46666781 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 46666712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 39930529 - 39930461
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  39930529 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39930461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 52630849 - 52630777
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  52630849 cttagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatg 52630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 8332089 - 8332018
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  8332089 ttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 8332018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 25789834 - 25789767
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  25789834 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25789767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 39329683 - 39329612
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  39329683 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctatg 39329612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 5806290 - 5806356
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcct 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  5806290 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcct 5806356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 6911566 - 6911497
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  6911566 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatg 6911497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 47037530 - 47037461
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  47037530 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 47037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 49822916 - 49822985
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  49822916 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 49822985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 20260086 - 20260154
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  20260086 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 20260154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 9831872 - 9831938
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  9831872 gtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 9831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 12190176 - 12190245
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||    
T  12190176 agggtgtgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtacatgcctatg 12190245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 38964678 - 38964747
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  38964678 agggggtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatg 38964747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 14788795 - 14788727
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| || |||||    
T  14788795 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaataataggaatgtatatgtctatg 14788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 35187529 - 35187469
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35187529 agggtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtat 35187469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 32824992 - 32824926
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||||||    
T  32824992 gtgtgtttgtttcaagttataattgttgatttccggaaataaaataataggaatgtatatgcctatg 32824926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 4683373 - 4683442
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||||    
T  4683373 agggtgtctttgtttcaatttataattgttgattcccagaaataaaatgataggaatgtatatgcctatg 4683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 5518503 - 5518572
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||| ||||||||    
T  5518503 agggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatg 5518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 51445083 - 51445148
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatg 51445148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 32202330 - 32202390
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  32202330 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtat 32202390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 48916021 - 48916090
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||| |||||||||||| ||||||||||| | |||||||||||||| ||||||| ||||||||    
T  48916021 agggtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatg 48916090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 1007819 - 1007764
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  1007819 gggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgatatgaat 1007764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 50190767 - 50190831
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgccta 281  Q
    |||||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||||| ||||||    
T  50190767 gtgtgtttgtttcaagatataattgttaatttccggaaataaaatgctaggaatgtatatgccta 50190831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 52699462 - 52699521
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    ||||||||| ||||||||||||||||| | || |||||| ||||||||||||||||||||    
T  52699462 cttagggtgcgtttgtttcaagttatattcgtagattcctgggaataaaatgataggaat 52699521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 29091739 - 29091688
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgata 265  Q
    |||||||||||||||||||||||| ||||||||||| |  ||||||||||||    
T  29091739 agggtgtgtttgtttcaagttatatttgttgattcctgataataaaatgata 29091688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 37436630 - 37436689
Alignment:
Q  224 tgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||| |||||| |||||||||| || |||||||||||||||||||||| ||| ||||    
T  37436630 tgtttcatgttatatttgttgattcacgagaataaaatgataggaatgtatatgcatatg 37436689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 31806759 - 31806807
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    |||||||||||||||||||| |||| |||||| | ||||||||||||||    
T  31806759 tgtgtttgtttcaagttatatttgtagattcctgagaataaaatgatag 31806807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 30241075 - 30241013
Alignment:
Q  221 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||| |||||||||   || ||||||||||||| ||| ||| ||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatg 30241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 13653917 - 13653872
Alignment:
Q  221 gtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||| | ||||||||||| | ||||||||||||||    
T  13653917 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatag 13653872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 11014448 - 11014492
Alignment:
Q  222 tttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||||  ||| |||||| ||||||||||||||||    
T  11014448 tttgtttcaagttatatatgtagattcctgggaataaaatgatag 11014492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 19065503 - 19065573
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19065503 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 19065573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 4765559 - 4765628
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4765559 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 4765628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 12970529 - 12970598
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12970529 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 12970598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 22935909 - 22935980
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  22935909 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 22935980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 28602629 - 28602558
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  28602629 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 28602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 555705 - 555774
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  555705 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 14206820 - 14206889
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  14206820 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 14206889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 18412281 - 18412212
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  18412281 agggtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatg 18412212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 11855658 - 11855723
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatg 11855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 29543014 - 29543083
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || |||||    
T  29543014 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgtctatg 29543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 6091782 - 6091718
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatg 6091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 36703945 - 36703877
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| || |||||    
T  36703945 gggtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatg 36703877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 27481429 - 27481360
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||| ||||||   || ||||||||||||||||||||| ||||||||    
T  27481429 agggtgtgtttgtttcaagttataatttttgatttttggaaataaaatgataggaatgtatatgcctatg 27481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 32536006 - 32535949
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  32536006 gtgtgtttgttttaagttataattgttgattcccaggaataaaatgatagaaatgtat 32535949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 8406959 - 8406898
Alignment:
Q  221 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctat 282  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||  |||||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatgataggaatgtacatgcctat 8406898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 42012174 - 42012230
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||    
T  42012174 acttagggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgatag 42012230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 8646412 - 8646459
Alignment:
Q  236 taattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||    
T  8646412 taattgttgattcccgggaataaaatgataggaatgtatatgtctatg 8646459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 6930714 - 6930664
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||| |||||||||||| ||||||||||| | ||||||||||||||    
T  6930714 ggtgtgtttatttcaagttatatttgttgattcctgagaataaaatgatag 6930664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 20962659 - 20962606
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    ||||||||||||||||||||| | || |||||  ||||||||||||||||||||    
T  20962659 gtgtgtttgtttcaagttatattcgtagattcttgggaataaaatgataggaat 20962606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 26637045 - 26637094
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatgatag 26637094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 25837987 - 25837914
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  25837987 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtacatgcctatg 25837914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 12710720 - 12710648
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  12710720 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 12710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 18726619 - 18726687
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18726619 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 18726687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 35818421 - 35818492
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  35818421 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 35818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 37392543 - 37392614
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37392543 ttagggtgtatttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 37392614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 38364155 - 38364084
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  38364155 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 38364084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 1554353 - 1554422
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  1554353 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 1554422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 16313502 - 16313575
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  16313502 acttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatacctatg 16313575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 32660932 - 32661001
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  32660932 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 32661001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 3050074 - 3050012
Alignment:
Q  221 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3050012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 26601941 - 26602006
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26601941 tgtgtttgtttcaaattataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26602006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 10896217 - 10896285
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  10896217 gggtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 10896285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 41228712 - 41228780
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgccta 281  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  41228712 tagggtgtgtttgtttcaagttataattgttaattcccgggaataaaatggtaggaatgtatatgccta 41228780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 38132734 - 38132805
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || |||||    
T  38132734 ttagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatg 38132805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 42755937 - 42755870
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  42755937 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 42755870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 26062216 - 26062147
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||    
T  26062216 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatg 26062147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 18298183 - 18298115
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  18298183 gggtttgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtatatacctatg 18298115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 7931306 - 7931251
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtat 7931251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 40197076 - 40197135
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  40197076 gggtatgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtat 40197135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 5020479 - 5020543
Alignment:
Q  204 aacgtcacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagga 268  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  5020479 aacgtgacttagagtgtgtttgtttcaagttatatttgttgattcatgggaataaaatgatagga 5020543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 7317445 - 7317376
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||| |||||||||  |   ||||||||||||||||| ||| ||||||||    
T  7317445 agggtgtgtttgtttcaagttatatttgttgattttcaaaaataaaatgataggaatatatatgcctatg 7317376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 33444627 - 33444676
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgata 265  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  33444627 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgata 33444676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 8635703 - 8635664
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaat 256  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8635703 gtgtgtttgtttcaagttataattgttgattcccaggaat 8635664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 21137134 - 21137200
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||| |||||||| ||||||||||| | ||||||||| |||| ||| ||| ||||||||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatg 21137200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 35394464 - 35394413
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 263  Q
    ||||||| |||||||||||||||||| || ||||||| || |||||||||||    
T  35394464 ttagggtttgtttgtttcaagttatatttattgattcacgagaataaaatga 35394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 25899702 - 25899657
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    |||||||||||||||| ||||| |||| |||||| |||||||||||    
T  25899702 ggtgtgtttgtttcaaattatatttgtagattcctgggaataaaat 25899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 41432804 - 41432756
Alignment:
Q  222 tttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    ||||||| |||||||| | || |||||| ||||||||||||||||||||    
T  41432804 tttgttttaagttatattcgtggattcctgggaataaaatgataggaat 41432756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 7053569 - 7053638
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7053569 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 7053638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 2657772 - 2657703
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  2657772 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacctatg 2657703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 8029405 - 8029336
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  8029405 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 8029336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 1317089 - 1317021
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1317089 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 1317021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 14171087 - 14171016
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  14171087 ttagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatctatatgcctatg 14171016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 18897989 - 18897924
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatg 18897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 7344077 - 7344150
Alignment:
Q  209 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctat 282  Q
    |||| |||||||||| ||||||| ||||||||||  ||| ||| |||||||||||||||||||||| |||||||    
T  7344077 cactaagggtgtgttcgtttcaaattataattgtaaatttccgagaataaaatgataggaatgtatatgcctat 7344150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 16968989 - 16968928
Alignment:
Q  222 tttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||| || |||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatgataggaatctatatgtctatg 16968928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 6705760 - 6705833
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||| ||||||||||   ||||||||||| ||| ||| ||| || |||||    
T  6705760 acttagggtgtgtttgtttcaagttatatttgttgattcattggaataaaatggtagaaatatatatgtctatg 6705833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 10246222 - 10246258
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccg 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  10246222 gggtgtgtttgtttcaagttataattgttgattcccg 10246258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 3869577 - 3869525
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    |||||||||||||||||||||||  |||| |||| | ||||||||||||||||    
T  3869577 agggtgtgtttgtttcaagttatttttgtagatttctgggaataaaatgatag 3869525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 10849784 - 10849834
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    |||||||||||||||||||||  || | |||||| ||||||||||||||||    
T  10849784 ggtgtgtttgtttcaagttatttttatagattcctgggaataaaatgatag 10849834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 346344 - 346413
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  346344 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 346413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 39995130 - 39995199
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39995130 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 39995199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 42674656 - 42674729
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42674656 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 42674729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 21737397 - 21737468
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21737397 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 21737468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 6171863 - 6171794
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  6171863 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatg 6171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 11071677 - 11071608
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  11071677 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 11071608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 9733846 - 9733914
Alignment:
Q  215 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9733846 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9733914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 34356696 - 34356768
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  34356696 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 34356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 5770109 - 5770178
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  5770109 agggtatgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 5770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 14777497 - 14777566
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  14777497 agggtgtgtttgtttcaatttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 14777566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 37534024 - 37533955
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||    
T  37534024 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgtctatg 37533955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 4559634 - 4559562
Alignment:
Q  211 cttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  4559634 cttagggtgtgtttgtttcaagttataattgttgattcccaagaataaaatgattggaatgtatatgcctatg 4559562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 2050935 - 2050869
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  2050935 gtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatacctatg 2050869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 17966060 - 17965986
Alignment:
Q  209 cacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| || |||||    
T  17966060 cacttagggtgtgtttgtttcaagttataattgttgattcccgataataaaatgattggaatgtatatgtctatg 17965986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 20426481 - 20426551
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  20426481 tagggtgtgtttgtttcaaattatatttgttgattcccgggaataaaatgataggaatttatatgcctatg 20426551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 37192591 - 37192525
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  37192591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 37192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 41729128 - 41729198
Alignment:
Q  213 tagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||||||    
T  41729128 tagggtgtgtttgtttcaagttataattttttattcccgggaataaaatgataggaatggatatgcctatg 41729198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 2521747 - 2521678
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||||    
T  2521747 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgattggaatgtatatgcctatg 2521678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 28311701 - 28311765
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatg 28311765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 40950856 - 40950927
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| ||||    
T  40950856 ttagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatg 40950927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 41750599 - 41750532
Alignment:
Q  216 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||    
T  41750599 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 41750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 45409322 - 45409253
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||| ||||||||    
T  45409322 agggtgtgtttgtttcaagttatatttgttgattcccaagtataaaatgataggaatgtatatgcctatg 45409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 638660 - 638596
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatg 638596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 37233496 - 37233432
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaacatatatgcctatg 37233432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 26310335 - 26310281
Alignment:
Q  220 tgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtat 274  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatgatagaaatgtat 26310281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 27357962 - 27358031
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||| || |||||    
T  27357962 agggtgtgtttgtttcaagttatatttgttgattcccaggtataaaatgatagggatgtatatgtctatg 27358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 6571759 - 6571690
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  6571759 agggtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatg 6571690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 13761013 - 13760948
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||| | ||||||    
T  13761013 tgtgtttgtttcaagttataattattgattttcgggaataaaatgataggaatatatgtacctatg 13760948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 14832877 - 14832813
Alignment:
Q  219 gtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||| ||| ||| ||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatg 14832813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 40570092 - 40570045
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  40570092 agggtgtgtttgtttcaagttataattgtagattcctgggaataaaat 40570045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 1988387 - 1988314
Alignment:
Q  210 acttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||| |||||||||||||| |||||||| ||||||||| | |||||||||||||||| ||| ||  ||||||||    
T  1988387 actttgggtgtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatg 1988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 45694262 - 45694204
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaat 270  Q
    |||||||| ||||||||||||||||| | || |||| | ||||||||||||||||||||    
T  45694262 ttagggtgcgtttgtttcaagttatattcgtagatttctgggaataaaatgataggaat 45694204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 7007647 - 7007582
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttg 277  Q
    ||||||||||||| |||||||||||| ||||||||||  ||| |||||||||| | ||| ||||||    
T  7007647 ttagggtgtgtttatttcaagttatatttgttgattcttggggataaaatgatggaaatatatttg 7007582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 18713660 - 18713725
Alignment:
Q  218 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||| ||||||||||  || ||||||||||||  ||| ||| ||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatg 18713725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 14403232 - 14403283
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgata 265  Q
    ||||||||||||||| ||||| || ||||||||||| || ||||||||||||    
T  14403232 agggtgtgtttgtttgaagttgtatttgttgattcctggaaataaaatgata 14403283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 25455096 - 25455049
Alignment:
Q  214 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 261  Q
    |||||||||||||||||||||||| |||| |||||| | |||||||||    
T  25455096 agggtgtgtttgtttcaagttatatttgtagattcctgagaataaaat 25455049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 14253578 - 14253525
Alignment:
Q  230 aagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||| |||||||||| ||||||||||||||||| ||| ||| || |||||    
T  14253578 aagttatatttgttgattctcgggaataaaatgatagaaatatatatgtctatg 14253525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 24499509 - 24499460
Alignment:
Q  217 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatag 266  Q
    ||||||||||||||||||||| ||||||||||   | |||||||||||||    
T  24499509 gtgtgtttgtttcaagttatatttgttgattcatagaaataaaatgatag 24499460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 28957 - 29020
Alignment:
Q  220 tgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtatatgcctatg 29020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 3562 - 3633
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||| |||| |||| |  |||||||||| |||  ||| ||| ||||||||    
T  3562 ttagggtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatg 3633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 4542 - 4471
Alignment:
Q  212 ttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatttgcctatg 283  Q
    |||||||||||||||||||||||||| |||| |||| |  |||||||||| |||  ||| ||| ||||||||    
T  4542 ttagggtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatg 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University