View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5804-Insertion-5 (Length: 123)
Name: NF5804-Insertion-5
Description: NF5804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5804-Insertion-5 |
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| [»] chr7 (1 HSPs) |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 116; Significance: 2e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 30163121 - 30163006
Alignment:
| Q |
8 |
atttttcttgaggcatatactttttgtttgatgctttaaaacgaaaagcatttaactttcagagtaaaagagcttatacatagagtgcaacagagtccca |
107 |
Q |
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| T |
30163121 |
atttttcttgaggcatatactttttgtttgatgctttaaaacgaaaagcatttaactttcagagtaaaagagcttatacatagagtgcaacagagtccca |
30163022 |
T |
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| Q |
108 |
tataaatccaacattg |
123 |
Q |
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| T |
30163021 |
tataaatccaacattg |
30163006 |
T |
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Target: chr8 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 123
Target Start/End: Original strand, 25384711 - 25384742
Alignment:
| Q |
92 |
gtgcaacagagtcccatataaatccaacattg |
123 |
Q |
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| T |
25384711 |
gtgcaacagagtcccatataaatccaacattg |
25384742 |
T |
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