View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5808-Insertion-10 (Length: 48)

Name: NF5808-Insertion-10
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5808-Insertion-10
NF5808-Insertion-10
[»] chr8 (1 HSPs)
chr8 (9-48)||(33995123-33995162)


Alignment Details
Target: chr8 (Bit Score: 40; Significance: 0.00000000000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 33995162 - 33995123
Alignment:
9 ggattttgggtctgttaccatgaacttgtatcaccccacc 48  Q
    ||||||||||||||||||||||||||||||||||||||||    
33995162 ggattttgggtctgttaccatgaacttgtatcaccccacc 33995123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University