View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5808-Insertion-2 (Length: 1055)
Name: NF5808-Insertion-2
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5808-Insertion-2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 710; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 710; E-Value: 0
Query Start/End: Original strand, 12 - 873
Target Start/End: Original strand, 18046896 - 18047765
Alignment:
| Q |
12 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccagaaatgaatgcaagcaatcgtttgcttcagtc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18046896 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccacaaatgaatgcaagcaatcgtttgcttcagtc |
18046995 |
T |
|
| Q |
112 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18046996 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
18047095 |
T |
|
| Q |
212 |
ttaagatatattgatctatcacggaacaatgtacttataaatcttcccccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
18047096 |
ttaagatatattgatctatcacggaacaatgtacttaaaaatcttcctccgaccattactagcctactgaacttgcaaactctaaaacttgctgattgtt |
18047195 |
T |
|
| Q |
312 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgacatgtatgccacgggggctaggaca |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
18047196 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgagatgtatgccacgggggctaggaca |
18047295 |
T |
|
| Q |
412 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaagctaaacaacctgagagggagattagaa |
511 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18047296 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaggctaaacaacctgagagggagattagaa |
18047395 |
T |
|
| Q |
512 |
ttaaaagggttgaatttcctgcgaaataatgctgcaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaattgcgatgga |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
18047396 |
ttaaaagggttgaatttcctgcgaaataatgctgcagagattgaatctgcaaaagtacttgttgagaagcgacaccttcaacatttggaattacgatgga |
18047495 |
T |
|
| Q |
612 |
atcatgtcgaccagaatgagatcatggaggaagatgagatcattttacaaggcctgcagcca---caccattcgcttcaaaaactagttatagatgggtt |
708 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||| |
|
|
| T |
18047496 |
atcatgtcgaccagaatgagatcatggaggaagatgagatcattttacaaggcctgcagccacaccaccactcacttcgaaaactagttatagatgggtt |
18047595 |
T |
|
| Q |
709 |
ttgcggcaaaaagttaccagactggatatgtaatctctcatcgctcttgactcttgaattccacaattgc-atagtttgacatcactgcgggaagtgtgt |
807 |
Q |
| |
|
|||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
18047596 |
ttgcggcagcaggttaccagactggatatggaatctctcatcgctcttgactcttgagatccacaattgcaatagtttgacattactgccggaagtgtgt |
18047695 |
T |
|
| Q |
808 |
-acctt-aatctttgaagacactttgcatttctaactgc-tatcat--aactgtatggaaatcccttgcat |
873 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||||||||| |
|
|
| T |
18047696 |
aaccttgtatctttgaagac-ctttgcatttctaactgcttatcattaaactggagggaaatcccttgcat |
18047765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 12 - 622
Target Start/End: Complemental strand, 18034257 - 18033647
Alignment:
| Q |
12 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccagaaatgaatgcaagcaatcgtttgcttcagtc |
111 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||| |
|
|
| T |
18034257 |
ggggtatacaactatcactaacatcatcatcttcctacaagttaaggacatttcatgtggtcggtccacaatcaaatgcaagcaatcgtttgcttcagtc |
18034158 |
T |
|
| Q |
112 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
211 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18034157 |
agatgatttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
18034058 |
T |
|
| Q |
212 |
ttaagatatattgatctatcacggaacaatgtacttataaatcttcccccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18034057 |
ttaagatatattgatctatcacggaacaatgtacttaaaaatcttcctccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
18033958 |
T |
|
| Q |
312 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgacatgtatgccacgggggctaggaca |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
18033957 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagtttgacatgtatgccacgtgggctaggaca |
18033858 |
T |
|
| Q |
412 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaagctaaacaacctgagagggagattagaa |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
18033857 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttgggtgagctaaacaacctgagagggagattagaa |
18033758 |
T |
|
| Q |
512 |
ttaaaagggttgaatttcctgcgaaataatgctgcaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaattgcgatgga |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18033757 |
ttaaaagggttgaatttcctgcgaaataatgctgaaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaattgcgatgga |
18033658 |
T |
|
| Q |
612 |
atcatgtcgac |
622 |
Q |
| |
|
||||||||||| |
|
|
| T |
18033657 |
atcatgtcgac |
18033647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 640 - 796
Target Start/End: Complemental strand, 18033599 - 18033439
Alignment:
| Q |
640 |
ggaagatgagatcattttacaaggcctgcagccacaccat---tcgcttcaaaaactagttatagatgggttttgcggcaaaaagttaccagactggata |
736 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||| || |||| |||||||||||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
18033599 |
ggaagatgagatcatttttctaggcctgcagccacaccaccactcacttcgaaaactagttatagatgggttttgtggcagcaggttaccagactggatg |
18033500 |
T |
|
| Q |
737 |
tgtaatctctcatcgctcttgactcttgaattccacaattgc-atagtttgacatcactgc |
796 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
18033499 |
tggaatctctcatcgctcttgactcttgagttccacaattgcaatagtttgacatcactgc |
18033439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 710; Significance: 0; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 710; E-Value: 0
Query Start/End: Original strand, 12 - 873
Target Start/End: Complemental strand, 4398430 - 4397561
Alignment:
| Q |
12 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccagaaatgaatgcaagcaatcgtttgcttcagtc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4398430 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccacaaatgaatgcaagcaatcgtttgcttcagtc |
4398331 |
T |
|
| Q |
112 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4398330 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
4398231 |
T |
|
| Q |
212 |
ttaagatatattgatctatcacggaacaatgtacttataaatcttcccccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4398230 |
ttaagatatattgatctatcacggaacaatgtacttaaaaatcttcctccgaccattactagcctactgaacttgcaaactctaaaacttgctgattgtt |
4398131 |
T |
|
| Q |
312 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgacatgtatgccacgggggctaggaca |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4398130 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgagatgtatgccacgggggctaggaca |
4398031 |
T |
|
| Q |
412 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaagctaaacaacctgagagggagattagaa |
511 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4398030 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaggctaaacaacctgagagggagattagaa |
4397931 |
T |
|
| Q |
512 |
ttaaaagggttgaatttcctgcgaaataatgctgcaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaattgcgatgga |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
4397930 |
ttaaaagggttgaatttcctgcgaaataatgctgcagagattgaatctgcaaaagtacttgttgagaagcgacaccttcaacatttggaattacgatgga |
4397831 |
T |
|
| Q |
612 |
atcatgtcgaccagaatgagatcatggaggaagatgagatcattttacaaggcctgcagccac---accattcgcttcaaaaactagttatagatgggtt |
708 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||| |
|
|
| T |
4397830 |
atcatgtcgaccagaatgagatcatggaggaagatgagatcattttacaaggcctgcagccacaccaccactcacttcgaaaactagttatagatgggtt |
4397731 |
T |
|
| Q |
709 |
ttgcggcaaaaagttaccagactggatatgtaatctctcatcgctcttgactcttgaattccacaattgc-atagtttgacatcactgcgggaagtgtgt |
807 |
Q |
| |
|
|||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
4397730 |
ttgcggcagcaggttaccagactggatatggaatctctcatcgctcttgactcttgagatccacaattgcaatagtttgacattactgccggaagtgtgt |
4397631 |
T |
|
| Q |
808 |
-acctt-aatctttgaagacactttgcatttctaactgc-tatcat--aactgtatggaaatcccttgcat |
873 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||||||||| |
|
|
| T |
4397630 |
aaccttgtatctttgaagac-ctttgcatttctaactgcttatcattaaactggagggaaatcccttgcat |
4397561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 12 - 622
Target Start/End: Original strand, 4498212 - 4498822
Alignment:
| Q |
12 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccagaaatgaatgcaagcaatcgtttgcttcagtc |
111 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4498212 |
ggggtatacaactatcaccaatctcatcatcttcctacaagttaaggacatttcacgtggtcagtccacaaatgaatgcaagcaatcgttttcttcagtc |
4498311 |
T |
|
| Q |
112 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4498312 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
4498411 |
T |
|
| Q |
212 |
ttaagatatattgatctatcacggaacaatgtacttataaatcttcccccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4498412 |
ttaagatatattgatctatcacggaacaatgtacttaaaaatcttcctccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
4498511 |
T |
|
| Q |
312 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgacatgtatgccacgggggctaggaca |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
4498512 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagtttgacatgtatgccatgtgggctaggaca |
4498611 |
T |
|
| Q |
412 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaagctaaacaacctgagagggagattagaa |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
4498612 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttgggtgagctaaacaacctgagagggagattagaa |
4498711 |
T |
|
| Q |
512 |
ttaaaagggttgaatttcctgcgaaataatgctgcaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaattgcgatgga |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4498712 |
ttaaaagggttgaatttcctgcgaaataatgctgaaaagattgaatctgcaaaagtacttcttgagaagtgacaccttcaacaattggaattgcgatgga |
4498811 |
T |
|
| Q |
612 |
atcatgtcgac |
622 |
Q |
| |
|
||||||||||| |
|
|
| T |
4498812 |
atcatgtcgac |
4498822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 12 - 622
Target Start/End: Original strand, 4519272 - 4519882
Alignment:
| Q |
12 |
ggggtatacggctatcaccaacatcatcatcttcctacaagttaaggacatttcacgtggtcagtccagaaatgaatgcaagcaatcgtttgcttcagtc |
111 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||| |
|
|
| T |
4519272 |
ggggtatacaactatcactaacatcatcatcttcctacaagttaaggacatttcatgtggtcggtccacaatcaaatgcaagcaatcgtttgcttcagtc |
4519371 |
T |
|
| Q |
112 |
agatgttttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
211 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519372 |
agatgatttttccttctcaggcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcat |
4519471 |
T |
|
| Q |
212 |
ttaagatatattgatctatcacggaacaatgtacttataaatcttcccccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519472 |
ttaagatatattgatctatcacggaacaatgtacttaaaaatcttcctccgaccattactagcctactgaacttgcaaactctaaaactttctgattgtt |
4519571 |
T |
|
| Q |
312 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgacatgtatgccacgggggctaggaca |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4519572 |
ctaagcttgaaatattgccagaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagtttgacatgtatgccacgtgggctaggaca |
4519671 |
T |
|
| Q |
412 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaagctaaacaacctgagagggagattagaa |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
4519672 |
gttgactgatcttcaaacactaacactttttgtactgaactctggaagtacaagtgtaaatgagttgggtgagctaaacaacctgagagggagattagaa |
4519771 |
T |
|
| Q |
512 |
ttaaaagggttgaatttcctgcgaaataatgctgcaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaattgcgatgga |
611 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519772 |
ttaaaagggttgaagttcctgcgaaataatgctgcagagattgaatctgcaaaagtacttgttgagaagcgacaccttcaacaattggaattgcgatgga |
4519871 |
T |
|
| Q |
612 |
atcatgtcgac |
622 |
Q |
| |
|
||||||||||| |
|
|
| T |
4519872 |
atcatgtcgac |
4519882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 32 - 603
Target Start/End: Original strand, 4529483 - 4530051
Alignment:
| Q |
32 |
acatcatcatcttcctacaagttaaggacatttcacgtggtcagtccagaaatgaatgcaagcaatcgtttgcttcagtcagatgttttttccttctcag |
131 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| | | | ||| ||| ||||||||||||| | ||| ||||||| | ||| ||||||| |||| |
|
|
| T |
4529483 |
acatcatcatcttcctacaagttaagaacatttctcttatgc---ccaaaaacgaatgcaagcaattatctgcgtcagtcaaacgttctttccttttcag |
4529579 |
T |
|
| Q |
132 |
gcttaaagttcttgcgtgtgttgacactttgtgggttgaatattgaagaaatcccaaatagtattgaagaaatgaagcatttaagatatattgatctatc |
231 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
4529580 |
gcttaaagttcttacgtgtgttgacactttgtggattgaatattctggcaatcccaaatagtattgaagagatgaagcatctgagatatattgatctatc |
4529679 |
T |
|
| Q |
232 |
acggaacaatgtacttataaatcttcccccgaccattactagcctactgaacttgcaaactctaaaactttctgattgttctaagcttgaaatattgcca |
331 |
Q |
| |
|
| || | |||||||| | ||||||| ||| |||||||||||||| |||| | ||||||||||||||||||||||||||| |||| |||||||| ||| |
|
|
| T |
4529680 |
aaagagtattgtacttaaagatcttccgccgggcattactagcctacagaaccttcaaactctaaaactttctgattgttctgagctcgaaatattacca |
4529779 |
T |
|
| Q |
332 |
gaaaatctcaatagaagtctcaggcatcttgagttaaatggttgcgagagattgacatgtatgccacgggggctaggacagttgactgatcttcaaacac |
431 |
Q |
| |
|
||||||||||| | |||||| |||||||||||||| |||||||| |||||||||| ||||||||||| ||| ||| ||||||| | |||||||||||| |
|
|
| T |
4529780 |
gaaaatctcaacaaaagtcttaggcatcttgagttgaatggttgtgagagattgagatgtatgccacaagggttagtacagttggttaatcttcaaacac |
4529879 |
T |
|
| Q |
432 |
taacactttttgtactgaactctggaagtacaagtgtaaatgagttggctaagctaaacaacctgagagggagattagaattaaaagggttgaatttcct |
531 |
Q |
| |
|
| |||||||||||||||||| | ||||||| | ||||||||||| | | ||||||||||||| ||||| ||||||||| ||||| ||||| ||||||| |
|
|
| T |
4529880 |
tgacactttttgtactgaacaatagaagtacgaacgtaaatgagttaggtgagctaaacaaccttagaggaagattagaaataaaaaggttggatttcct |
4529979 |
T |
|
| Q |
532 |
gcgaaataatgctgcaaagattgaatctgcaaaagtacttcttgagaagcgacaccttcaacaattggaatt |
603 |
Q |
| |
|
|||||| ||||||| ||||||||| || ||||||||||||||||||| ||||||||| | ||||||||| |
|
|
| T |
4529980 |
gcgaaacgctgctgcagagattgaatttgtaaaagtacttcttgagaaggaacaccttcagctattggaatt |
4530051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 640 - 793
Target Start/End: Original strand, 4519957 - 4520114
Alignment:
| Q |
640 |
ggaagatgagatcattttacaaggcctgcagccacacca---ttcgcttcaaaaactagttatagatgggttttgcggcaaaaagttaccagactggata |
736 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519957 |
ggaagatgagatcattttacaaggcctgcagccacaccaccattcacttcgaaaactagttatagatgggttttgcggcaaaaagttaccagactggata |
4520056 |
T |
|
| Q |
737 |
tgtaatctctcatcgctcttgactcttgaattccacaattgca-tagtttgacatcac |
793 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
4520057 |
tgtaatctctcatcgctcttgactcttgagttccacaattgcagtagtttgacatcac |
4520114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 640 - 796
Target Start/End: Original strand, 4530142 - 4530299
Alignment:
| Q |
640 |
ggaagatgagatcattttacaaggcctgcagccacaccattcgcttcaaaaactagttatagatgggttttgcggcaaaaagttaccagactggatatgt |
739 |
Q |
| |
|
||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4530142 |
ggaagatgagaagattttagaaggtctgcagccacaccattcgcttcaaaaactagttatagatgggttttgcggcaaaaagttaccagactggataggg |
4530241 |
T |
|
| Q |
740 |
aatctctcatcgctcttgactcttgaattccacaattgc-atagtttgacatcactgc |
796 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| |
|
|
| T |
4530242 |
aatctctcatcgctcttgactcttgagttccacaattgcaatggtttgacatcactgc |
4530299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 640 - 796
Target Start/End: Original strand, 4498870 - 4499030
Alignment:
| Q |
640 |
ggaagatgagatcattttacaaggcctgcagccacaccat---tcgcttcaaaaactagttatagatgggttttgcggcaaaaagttaccagactggata |
736 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||| || |||| |||||||||||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
4498870 |
ggaagatgagatcatttttctaggcctgcagccacaccaccactcacttcgaaaactagttatagatgggttttgtggcagcaggttaccagactggatg |
4498969 |
T |
|
| Q |
737 |
tgtaatctctcatcgctcttgactcttgaattccacaattgc-atagtttgacatcactgc |
796 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
4498970 |
tggaatctctcatcgctcttgactcttgagttccacaattgcaatagtttgacatcactgc |
4499030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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