View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5808-Insertion-3 (Length: 613)

Name: NF5808-Insertion-3
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5808-Insertion-3
NF5808-Insertion-3
[»] chr7 (15 HSPs)
chr7 (8-613)||(48158575-48159181)
chr7 (248-310)||(12306902-12306964)
chr7 (248-298)||(41841088-41841138)
chr7 (330-415)||(40491682-40491766)
chr7 (268-310)||(12306679-12306721)
chr7 (268-310)||(45004965-45005007)
chr7 (269-310)||(40796074-40796115)
chr7 (245-310)||(45004907-45004972)
chr7 (246-310)||(48253089-48253153)
chr7 (268-310)||(17111820-17111862)
chr7 (346-415)||(42481803-42481871)
chr7 (264-308)||(6996476-6996520)
chr7 (438-490)||(17111820-17111872)
chr7 (246-310)||(22310764-22310828)
chr7 (266-310)||(41386913-41386957)
[»] chr2 (12 HSPs)
chr2 (247-310)||(33502947-33503010)
chr2 (239-296)||(9943339-9943396)
chr2 (344-423)||(10618861-10618940)
chr2 (247-313)||(15928529-15928595)
chr2 (268-310)||(7630361-7630403)
chr2 (268-310)||(44148518-44148560)
chr2 (344-409)||(11759770-11759834)
chr2 (264-293)||(36979333-36979362)
chr2 (359-412)||(42774783-42774835)
chr2 (245-310)||(44439172-44439237)
chr2 (244-301)||(44810504-44810561)
chr2 (334-382)||(11650672-11650720)
[»] chr4 (17 HSPs)
chr4 (266-317)||(29728945-29728996)
chr4 (268-310)||(25318992-25319034)
chr4 (264-310)||(33560669-33560715)
chr4 (244-310)||(35064984-35065050)
chr4 (245-310)||(46344929-46344994)
chr4 (259-307)||(39211073-39211121)
chr4 (339-382)||(5835815-5835858)
chr4 (244-287)||(39438709-39438752)
chr4 (247-310)||(41058850-41058913)
chr4 (245-296)||(45329768-45329819)
chr4 (264-310)||(13947789-13947835)
chr4 (330-372)||(17897805-17897847)
chr4 (269-306)||(24338547-24338584)
chr4 (245-310)||(49138933-49138998)
chr4 (334-382)||(5025594-5025642)
chr4 (274-310)||(8330066-8330102)
chr4 (390-422)||(14072528-14072560)
[»] chr1 (19 HSPs)
chr1 (344-415)||(11817228-11817298)
chr1 (264-310)||(32088671-32088717)
chr1 (320-411)||(47899361-47899451)
chr1 (312-371)||(15986114-15986173)
chr1 (264-310)||(9939826-9939872)
chr1 (244-290)||(20720738-20720783)
chr1 (268-310)||(37131879-37131921)
chr1 (245-310)||(1232778-1232843)
chr1 (270-299)||(2565643-2565672)
chr1 (265-310)||(15452428-15452473)
chr1 (268-301)||(15478108-15478141)
chr1 (268-317)||(18325182-18325231)
chr1 (251-296)||(26439796-26439841)
chr1 (245-293)||(3134829-3134877)
chr1 (259-310)||(14515381-14515433)
chr1 (268-308)||(24587854-24587894)
chr1 (375-415)||(35682020-35682059)
chr1 (248-300)||(36780225-36780277)
chr1 (266-310)||(37523008-37523052)
[»] chr6 (12 HSPs)
chr6 (268-310)||(33136581-33136623)
chr6 (248-307)||(2002566-2002625)
chr6 (264-310)||(33141805-33141851)
chr6 (245-310)||(25195462-25195527)
chr6 (330-382)||(1500036-1500088)
chr6 (268-304)||(31305954-31305990)
chr6 (346-401)||(46201-46255)
chr6 (271-317)||(18690620-18690666)
chr6 (245-290)||(34620808-34620853)
chr6 (245-290)||(34748245-34748290)
chr6 (243-287)||(12126082-12126126)
chr6 (266-310)||(34027503-34027547)
[»] chr5 (13 HSPs)
chr5 (318-415)||(117383-117477)
chr5 (268-310)||(10898667-10898709)
chr5 (246-290)||(12404997-12405041)
chr5 (265-317)||(36927773-36927826)
chr5 (264-310)||(7637479-7637526)
chr5 (268-310)||(29922839-29922881)
chr5 (346-415)||(14299430-14299498)
chr5 (273-310)||(40234423-40234460)
chr5 (268-312)||(11648027-11648071)
chr5 (268-312)||(34250447-34250491)
chr5 (265-317)||(36928015-36928067)
chr5 (266-310)||(38592173-38592217)
chr5 (247-291)||(39097188-39097232)
[»] chr3 (9 HSPs)
chr3 (268-316)||(38332629-38332677)
chr3 (264-306)||(48089491-48089533)
chr3 (330-415)||(24916588-24916672)
chr3 (346-437)||(35264324-35264415)
chr3 (244-296)||(52925723-52925775)
chr3 (245-315)||(51667074-51667144)
chr3 (245-310)||(3845210-3845275)
chr3 (243-312)||(21356787-21356856)
chr3 (346-382)||(41115275-41115311)
[»] chr8 (12 HSPs)
chr8 (268-310)||(4336346-4336388)
chr8 (247-313)||(5859160-5859226)
chr8 (438-490)||(15677886-15677938)
chr8 (246-310)||(42455835-42455899)
chr8 (347-393)||(7602042-7602088)
chr8 (244-310)||(12742207-12742273)
chr8 (344-382)||(18355760-18355798)
chr8 (268-310)||(39648243-39648285)
chr8 (346-415)||(10368069-10368137)
chr8 (344-408)||(13418735-13418798)
chr8 (375-415)||(16972006-16972045)
chr8 (342-382)||(35550309-35550349)
[»] scaffold0168 (1 HSPs)
scaffold0168 (245-310)||(31748-31813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (248-298)||(23703-23753)


Alignment Details
Target: chr7 (Bit Score: 575; Significance: 0; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 8 - 613
Target Start/End: Original strand, 48158575 - 48159181
Alignment:
Q  8 aaggatcatttctctataagaaaagactctaacaaatcaatatttttggtaacactagtggagttaaa-gttggaaatcattgaaagtgagtttggaatc 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48158575 aaggatcatttctctataagaaaagactctaacaaatcaatatttttggtaacactagtggagttaaaagttggaaatcattgaaagtgagtttggaatc 48158674  T
Q  107 taagttgggttctaccattgaagtaaaatttaatagtgtttcttaaatcaaatgttgcaaatttgcaatcatggtccactaaaagagagttaagaactca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48158675 taagttgggttctaccattgaagtaaaatttaatagtgtttcttaaatcatatgttgcaaatttgcaatcatggtccactaaaagagagttaagaactca 48158774  T
Q  207 aattgagttagcctgtttggtttcatgtatgtagcaatcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaatt 306  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48158775 aattgagttagcctgtttggtttcacgtatgtagcaatcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaatt 48158874  T
Q  307 gattataacttagtgtatgctttgttctgcgttgacgaaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggt 406  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48158875 gattataacttagtgtatgctttgttctgcgttgacggaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggt 48158974  T
Q  407 aaaatgattatgtttgtgtgcatccatgtaacttcaaatcgaatcaattctattggaaagcaaccaaacatctgagaatcaattacaaacctccataatt 506  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48158975 aaaatgattatgtttgtgtgcattcatgtaacttcaaatcgaatcaattctactggaaagcaaccaaacatctgagaatcaattacaaacctccataatt 48159074  T
Q  507 ctacaagtggaaccaaacaaacacttatatctgtatcggaggagtagctcaatggcggcataggcggggacacctaaagagttatatgtaggtggtttag 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48159075 ctacaagtggaaccaaacaaacacttatatctgtatcggaggagtagctcaatggcggcataggcagggacacctaaagagttatatgtaggtggtttag 48159174  T
Q  607 agttgaa 613  Q
    |||||||    
T  48159175 agttgaa 48159181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 12306902 - 12306964
Alignment:
Q  248 aattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||| || ||| | |||||||||||||||||||||||||||||| ||||| ||||||||    
T  12306902 aattgattttggaggtgcaaaattgattttgacatgtttggttgctcttgagtagaattgatt 12306964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 41841088 - 41841138
Alignment:
Q  248 aattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcga 298  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  41841088 aattgattatggaggtgtaaaattgactttgacatgtttggttgctctcga 41841138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 415
Target Start/End: Complemental strand, 40491766 - 40491682
Alignment:
Q  330 gttctgcgttgacgaaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||| |||| | |||||||| |||||||||||||| |||| ||||||||   ||| |||||||||||||||||||| |||||    
T  40491766 gttctgcggtgacaagaattgattttgagtgaattgattctgtaaaattgattttgact-aaaagtgagttgaaggtaaagtgatt 40491682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 12306679 - 12306721
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  12306679 aattgattttgacatgtttggttgctctcaagtagaattgatt 12306721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 45004965 - 45005007
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  45004965 aattgattttgacatgtttggttgctctcgaatagaattgatt 45005007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 40796115 - 40796074
Alignment:
Q  269 attgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||| ||||||||||||||||||||||| ||||||||||    
T  40796115 attgattctgacatgtttggttgctctcgagcaaaattgatt 40796074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 45004907 - 45004972
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| |  ||| ||| ||||||||||||||||||||||| ||||| |||| ||||||||    
T  45004907 caaaattgattctagaggtgtagaattgattttgacatgtttggttactctctagtataattgatt 45004972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 48253089 - 48253153
Alignment:
Q  246 aaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||  ||  |||||||||||||||||||||||| |||||||| |||  ||||||||    
T  48253089 aaaattgattatagagaggtaaaattgattttgacatgtttgtttgctctcaagtctaattgatt 48253153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 17111820 - 17111862
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||    
T  17111820 aattgattctgacatgtttggttgctttcgagtagaattgatt 17111862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Original strand, 42481803 - 42481871
Alignment:
Q  346 aattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||| | |||||||||||| |||| |||||||||  |  ||||||||||||||| |||||||||||    
T  42481803 aattgattttaagtgaattgattatgtaaaattgattctgaa-aaaaagtgagttgaatgtaaaatgatt 42481871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 6996476 - 6996520
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaattga 308  Q
    |||||||||||| |||||||||||||| ||||| |||| ||||||    
T  6996476 gtaaaattgattctgacatgtttggttactctcaagtataattga 6996520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 490
Target Start/End: Complemental strand, 17111872 - 17111820
Alignment:
Q  438 cttcaaatcgaatcaattctattggaaagcaaccaaacatctgagaatcaatt 490  Q
    |||||| | |||||||||||| | |||||||||||||||| | ||||||||||    
T  17111872 cttcaagtagaatcaattctactcgaaagcaaccaaacatgtcagaatcaatt 17111820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 22310828 - 22310764
Alignment:
Q  246 aaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||| | |||  ||| |||||||||||| |||||||||| ||||||| || ||||||||    
T  22310828 aaaattgattctaaagatgtataattgattttgatatgtttggttactctcgaatagaattgatt 22310764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 41386957 - 41386913
Alignment:
Q  266 aaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||| ||||||||||| ||||| ||||||| ||||||||    
T  41386957 aaaattgattctgacatgtttgattgctttcgagtataattgatt 41386913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 33503010 - 33502947
Alignment:
Q  247 aaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  33503010 aaattgattctgaaggtgtaaaattgattttgacatgtttggttgctctcgagtaaaactgatt 33502947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 9943339 - 9943396
Alignment:
Q  239 agcaatcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctc 296  Q
    ||||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  9943339 agcaaccaaaattgattctgaaggtgtaaaattgattttaacatgtttggttgctctc 9943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 10618861 - 10618940
Alignment:
Q  344 aaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatg-attatgtttgt 423  Q
    |||||||||| | ||||||||||||||||| ||||||||| | ||||||| ||| ||||||||||| || |||||||||||    
T  10618861 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaa-tgaattgaaggtaaagtgaattatgtttgt 10618940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 15928595 - 15928529
Alignment:
Q  247 aaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgattata 313  Q
    ||||||||| || ||| ||| |||||||||||||||||||||||| | | ||||| |||||||||||    
T  15928595 aaattgattctggaggtgtagaattgattttgacatgtttggttgttgttgagtagaattgattata 15928529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 7630361 - 7630403
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  7630361 aattgattttgacatgtttggttgctttcaagtagaattgatt 7630403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 44148518 - 44148560
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  44148518 aattgattttgacatgtttggttgctcttgactataattgatt 44148560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 11759770 - 11759834
Alignment:
Q  344 aaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaa 409  Q
    |||||||| | ||||||||||||||||||| ||||||||   | | ||||||||||||||||||||    
T  11759770 aaaattgagtttgagtgaattgattttgtaaaattgattttga-ttaaaagtgagttgaaggtaaa 11759834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 293
Target Start/End: Original strand, 36979333 - 36979362
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgct 293  Q
    ||||||||||||||||||||||||||||||    
T  36979333 gtaaaattgattttgacatgtttggttgct 36979362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 42774783 - 42774835
Alignment:
Q  359 tgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatg 412  Q
    ||||||||||||||| |||||||||  |||||||| | ||||||||||||||||    
T  42774783 tgaattgattttgtaaaattgattctgactaaaaa-taagttgaaggtaaaatg 42774835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 44439172 - 44439237
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| | |||| ||  |||| |||||||||||||||||||| ||| || ||||||||||    
T  44439172 caaaattgattctaaaggtgttgaattaattttgacatgtttggttgccctccaggaaaattgatt 44439237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 44810504 - 44810561
Alignment:
Q  244 tcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagta 301  Q
    ||||||||||||||| ||| |||||| ||||||| |  | ||||||||||||||||||    
T  44810504 tcaaaattgattatggaggtgtaaaactgattttaatttatttggttgctctcgagta 44810561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 11650672 - 11650720
Alignment:
Q  334 tgcgttgacgaaaattgattgtgagtgaattgattttgtataattgatt 382  Q
    ||||||||| |||||||||| |||||||||||||| |||| | ||||||    
T  11650672 tgcgttgacaaaaattgattttgagtgaattgattatgtaaatttgatt 11650720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 29728945 - 29728996
Alignment:
Q  266 aaaattgattttgacatgtttggttgctctcgagtaaaattgattataactt 317  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  29728945 aaaattgattttgacaagtttggttgctctcgagtagaattgattataactt 29728996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 25318992 - 25319034
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  25318992 aattgattttgacatgtttggttgctctcgagtagaattgatt 25319034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 33560715 - 33560669
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  33560715 gtaacattgattttgacatgtttggttgctctcgagtagaattgatt 33560669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 35064984 - 35065050
Alignment:
Q  244 tcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||||| ||| ||| |||||||| |||||| |||||||||| ||||||| ||||||||    
T  35064984 tcaaaattgattatggaggtgtagaattgattatgacatttttggttgctttcgagtagaattgatt 35065050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 46344994 - 46344929
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||| ||| ||| |||| ||| ||||||||||||||||| || |||| ||||||||    
T  46344994 caaaattgattatggaggtgtataattaattctgacatgtttggttgctttcaagtataattgatt 46344929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 39211121 - 39211073
Alignment:
Q  259 aaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattg 307  Q
    |||| ||| |||||||| ||||||||||||||||| |||||||||||||    
T  39211121 aaggtgtataattgattctgacatgtttggttgctatcgagtaaaattg 39211073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 5835858 - 5835815
Alignment:
Q  339 tgacgaaaattgattgtgagtgaattgattttgtataattgatt 382  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||    
T  5835858 tgacgaaaattgattttgattgaattgattttgtagaattgatt 5835815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Original strand, 39438709 - 39438752
Alignment:
Q  244 tcaaaattgattatgaaggcgtaaaattgattttgacatgtttg 287  Q
    |||||||||||| || ||| ||||||||||||||||||||||||    
T  39438709 tcaaaattgattttggaggtgtaaaattgattttgacatgtttg 39438752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 41058850 - 41058913
Alignment:
Q  247 aaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||| | |||| ||| |||||||| |||||||||||| || | ||||||||||||||||    
T  41058850 aaattgattctaaaggagtagaattgattgtgacatgtttggatgttttcgagtaaaattgatt 41058913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 45329768 - 45329819
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctc 296  Q
    |||||||||||||  ||| |||||||||| ||| ||||||||||||||||||    
T  45329768 caaaattgattatagaggtgtaaaattgactttaacatgtttggttgctctc 45329819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 13947835 - 13947789
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||||||||||||||||| |||| || || ||||||||    
T  13947835 gtaaaattgattttgacatgtttggtttctctagaatataattgatt 13947789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 17897805 - 17897847
Alignment:
Q  330 gttctgcgttgacgaaaattgattgtgagtgaattgattttgt 372  Q
    |||||||| |||| |||||||||| ||||||||||||||||||    
T  17897805 gttctgcggtgacaaaaattgattttgagtgaattgattttgt 17897847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 24338547 - 24338584
Alignment:
Q  269 attgattttgacatgtttggttgctctcgagtaaaatt 306  Q
    |||||||||||||||||||| || ||||||||||||||    
T  24338547 attgattttgacatgtttggatgttctcgagtaaaatt 24338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 49138998 - 49138933
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| |  ||| ||| |||||||| ||||||||||||||| | || |||||||||||||    
T  49138998 caaaattgattctagaggtgtagaattgattctgacatgtttggttgttttcaagtaaaattgatt 49138933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 5025642 - 5025594
Alignment:
Q  334 tgcgttgacgaaaattgattgtgagtgaattgattttgtataattgatt 382  Q
    |||| |||| |||||||||| ||| ||||||||||||||| ||||||||    
T  5025642 tgcggtgactaaaattgattttgattgaattgattttgtagaattgatt 5025594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 8330066 - 8330102
Alignment:
Q  274 ttttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||| |||||||||||||||||| |||||||||||||    
T  8330066 tttttacatgtttggttgctctcaagtaaaattgatt 8330102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 14072560 - 14072528
Alignment:
Q  390 aaaagtgagttgaaggtaaaatgattatgtttg 422  Q
    |||||||||||||||||||| ||||||||||||    
T  14072560 aaaagtgagttgaaggtaaattgattatgtttg 14072528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 415
Target Start/End: Original strand, 11817228 - 11817298
Alignment:
Q  344 aaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||| | ||||||||||||||||||| ||||||||| |||| ||||| ||||||||| ||||||||||    
T  11817228 aaaattgagtttgagtgaattgattttgtaaaattgattctaact-aaaagcgagttgaagataaaatgatt 11817298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 32088717 - 32088671
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  32088717 gtaaaattgattttgacatgtttggttgctctcaagtagaattgatt 32088671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 411
Target Start/End: Complemental strand, 47899451 - 47899361
Alignment:
Q  320 tgtatgctttgttctgcgttgacgaaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaat 411  Q
    |||||| |||||| | | ||||| | |||||||| ||||||||||||||||||| |||||||||  ||| |||||||||||| || ||||||    
T  47899451 tgtatgttttgttatactttgacaagaattgattttgagtgaattgattttgtaaaattgattcttact-aaaagtgagttgcagataaaat 47899361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 15986114 - 15986173
Alignment:
Q  312 taacttagtgtatgctttgttctgcgttgacgaaaattgattgtgagtgaattgattttg 371  Q
    |||||||||| ||| ||||||||||| |||| | |||||||| ||| |||||||||||||    
T  15986114 taacttagtgcatgttttgttctgcggtgacaataattgattttgactgaattgattttg 15986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 9939872 - 9939826
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||||    
T  9939872 gtaaaattaattttgacatgtttggttcctctagagtataattgatt 9939826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 20720738 - 20720783
Alignment:
Q  244 tcaaaattgattatgaaggcgtaaaattgattttgacatgtttggtt 290  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||    
T  20720738 tcaaaattgattat-aaggtgtagaattgattttgacatgtttggtt 20720783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 37131879 - 37131921
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| |||||||||||||||||||||| | ||||||    
T  37131879 aattgattttggcatgtttggttgctctcgagtagatttgatt 37131921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 1232843 - 1232778
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||| ||||||| || | |||||||||||||||| |||| | |||||  ||||||||||||||||    
T  1232843 caaaagtgattataaacgtgtaaaattgattttgaaatgtctagttgcaatcgagtaaaattgatt 1232778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 299
Target Start/End: Original strand, 2565643 - 2565672
Alignment:
Q  270 ttgattttgacatgtttggttgctctcgag 299  Q
    ||||||||||||||||||||||||||||||    
T  2565643 ttgattttgacatgtttggttgctctcgag 2565672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 15452428 - 15452473
Alignment:
Q  265 taaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||| ||||| || ||||||||| ||||||||    
T  15452428 taaaattgattttgacatctttggatgttctcgagtagaattgatt 15452473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 301
Target Start/End: Complemental strand, 15478141 - 15478108
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagta 301  Q
    ||||||||||||||||||||||||||||| ||||    
T  15478141 aattgattttgacatgtttggttgctctcaagta 15478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 18325231 - 18325182
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgattataactt 317  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| ||||||    
T  18325231 aattgattttgacatgtttggattttctcgagtagaattgattttaactt 18325182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 26439796 - 26439841
Alignment:
Q  251 tgattatgaaggcgtaaaattgattttgacatgtttggttgctctc 296  Q
    ||||||||  || |||||||||||||||||||||||| ||||||||    
T  26439796 tgattatggcggtgtaaaattgattttgacatgtttgattgctctc 26439841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 3134877 - 3134829
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgct 293  Q
    ||||||||| | |||||| ||||||||||||||||||| |||| |||||    
T  3134877 caaaattgactttgaaggtgtaaaattgattttgacatatttgattgct 3134829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 14515433 - 14515381
Alignment:
Q  259 aaggcgtaaaattgatttt-gacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||| |||||||||||||| || ||||||| ||||||||||||| ||||||||    
T  14515433 aaggtgtaaaattgatttttgatatgtttgattgctctcgagtagaattgatt 14515381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 24587854 - 24587894
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattga 308  Q
    |||||||| ||||||||||||||||||| ||||| ||||||    
T  24587854 aattgattgtgacatgtttggttgctcttgagtagaattga 24587894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 415
Target Start/End: Complemental strand, 35682059 - 35682020
Alignment:
Q  375 aattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  35682059 aattgattcagactaaaaa-tgagttgaaggtaaaatgatt 35682020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 36780277 - 36780225
Alignment:
Q  248 aattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagt 300  Q
    ||||||||||| ||| ||| |||||||||||| ||||||||||| | ||||||    
T  36780277 aattgattatggaggtgtagaattgattttgatatgtttggttgttgtcgagt 36780225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 37523052 - 37523008
Alignment:
Q  266 aaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||| ||||||||||| ||||||| ||||| ||||||||    
T  37523052 aaaattgattatgacatgtttgattgctctggagtagaattgatt 37523008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 33136623 - 33136581
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  33136623 aattgattttgacatgtttggttgctctcgagtataattgatt 33136581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 2002625 - 2002566
Alignment:
Q  248 aattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattg 307  Q
    |||||||| || ||||||| |||||||||||||||||||||||| | ||||||| |||||    
T  2002625 aattgattttggaggcgtagaattgattttgacatgtttggttgttttcgagtagaattg 2002566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 33141851 - 33141805
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||    
T  33141851 gtaaaattgattttgatatgtttggttgctctcaagtataattgatt 33141805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 25195527 - 25195462
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| || | | ||| |||||||| ||||||||||||||||| ||||||| ||||||||    
T  25195527 caaaattgattctggatgtgtataattgattctgacatgtttggttgctatcgagtataattgatt 25195462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 1500088 - 1500036
Alignment:
Q  330 gttctgcgttgacgaaaattgattgtgagtgaattgattttgtataattgatt 382  Q
    |||||| |||||| |||||||||| ||| ||||||||||||||| ||||||||    
T  1500088 gttctgagttgacaaaaattgattttgactgaattgattttgtaaaattgatt 1500036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 31305990 - 31305954
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaa 304  Q
    ||||||||||||||||||||||||||| |||||||||    
T  31305990 aattgattttgacatgtttggttgctcacgagtaaaa 31305954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 401
Target Start/End: Original strand, 46201 - 46255
Alignment:
Q  346 aattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttg 401  Q
    |||||||| |||||||||||||| |||| ||||||||| |||| ||||||||||||    
T  46201 aattgattttgagtgaattgattctgtaaaattgattctaact-aaaagtgagttg 46255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 18690620 - 18690666
Alignment:
Q  271 tgattttgacatgtttggttgctctcgagtaaaattgattataactt 317  Q
    ||||||||||||||||||||||| || |||| |||||||| ||||||    
T  18690620 tgattttgacatgtttggttgctttcaagtagaattgattctaactt 18690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 34620808 - 34620853
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggtt 290  Q
    ||||||||||| | |||| ||| |||||||||||||||||||||||    
T  34620808 caaaattgattctaaaggtgtagaattgattttgacatgtttggtt 34620853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 34748245 - 34748290
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggtt 290  Q
    ||||||||||| | |||| ||| |||||||||||||||||||||||    
T  34748245 caaaattgattctaaaggtgtagaattgattttgacatgtttggtt 34748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 12126082 - 12126126
Alignment:
Q  243 atcaaaattgattatgaaggcgtaaaattgattttgacatgtttg 287  Q
    ||||||||||||| |||||| |||||||||||| | |||||||||    
T  12126082 atcaaaattgattttgaaggtgtaaaattgattctaacatgtttg 12126126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 34027547 - 34027503
Alignment:
Q  266 aaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||| |||||||||||||||  ||||||||||| |||||||||||    
T  34027547 aaaactgattttgacatgttaagttgctctcgaataaaattgatt 34027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 318 - 415
Target Start/End: Original strand, 117383 - 117477
Alignment:
Q  318 agtgtatgctttgttctgcgttgacgaaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||| || |||||| |||||| |||||||||||  |||||||||||| ||||  ||||||||  |||| || ||||||||||||||||||||||    
T  117383 agtgtatgtttggttctgtgttgacaaaaattgattg--agtgaattgattatgtaatattgattctgactagaa-gtgagttgaaggtaaaatgatt 117477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 10898667 - 10898709
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  10898667 aattaattttgacatgtttggttgctctcgagtaaaattgatt 10898709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 12405041 - 12404997
Alignment:
Q  246 aaaattgattatgaaggcgtaaaattgattttgacatgtttggtt 290  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  12405041 aaaattgattatgaaggtgtataattgattttgacatgtttggtt 12404997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 36927773 - 36927826
Alignment:
Q  265 taaaattgattttgacatgtttggttgctc-tcgagtaaaattgattataactt 317  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||    
T  36927773 taaaattgattttgacatatttggttgctcttcgagtacaattgatcataactt 36927826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 7637526 - 7637479
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctc-gagtaaaattgatt 310  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||    
T  7637526 gtaaaattgattttgacatgtttgattgctctcaaagtaaaattgatt 7637479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 29922839 - 29922881
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||||||||| ||||||| | ||||||||    
T  29922839 aattgattttgacatgtttggttgttctcgagcagaattgatt 29922881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 14299498 - 14299430
Alignment:
Q  346 aattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||| ||| |||||||||||||| |||| ||||||||| |  ||||| |||||||||||||||| |||||    
T  14299498 aatttattttgagtgaattgattgtgtaaaattgattctagataaaa-gtgagttgaaggtaaagtgatt 14299430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 40234460 - 40234423
Alignment:
Q  273 attttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  40234460 atttttacatgtttggttgttctcgagtaaaattgatt 40234423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 11648027 - 11648071
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgattat 312  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||||    
T  11648027 aattgattttgacatgtttgattgctgtcgagtagaatttattat 11648071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 34250491 - 34250447
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgattat 312  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||||||    
T  34250491 aattgtttttgacatgtttggtttctctagagtagaattgattat 34250447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 36928015 - 36928067
Alignment:
Q  265 taaaattgattttgacatgtttggttgctctcgagtaaaattgattataactt 317  Q
    |||||||||||||||||| ||||||||||||  |||| |||||| | ||||||    
T  36928015 taaaattgattttgacatatttggttgctctgaagtagaattgactctaactt 36928067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 38592173 - 38592217
Alignment:
Q  266 aaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||| |||| |||||||||||||||| |||| ||||||||    
T  38592173 aaaattgatattgatatgtttggttgctctcaagtagaattgatt 38592217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 39097188 - 39097232
Alignment:
Q  247 aaattgattatgaaggcgtaaaattgattttgacatgtttggttg 291  Q
    |||||||||||  ||| ||| ||||||||||||||||||||||||    
T  39097188 aaattgattatagaggtgtagaattgattttgacatgtttggttg 39097232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 316
Target Start/End: Complemental strand, 38332677 - 38332629
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgattataact 316  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  38332677 aattgattttgacatgtttggtggctcttgagcaaaattgattataact 38332629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 48089533 - 48089491
Alignment:
Q  264 gtaaaattgattttgacatgtttggttgctctcgagtaaaatt 306  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  48089533 gtaaaattgattttggcatgtttggttgctctcgagtataatt 48089491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 330 - 415
Target Start/End: Complemental strand, 24916672 - 24916588
Alignment:
Q  330 gttctgcgttgacgaaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||| |||| |||||| ||| |||  || ||||||||||| ||||||||||  || |||||||||||||| |||||||||||    
T  24916672 gttctgcggtgacaaaaattaattttgaacgagttgattttgtaaaattgattcaggct-aaaagtgagttgaatgtaaaatgatt 24916588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 35264324 - 35264415
Alignment:
Q  346 aattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatga-ttatgtttgtgtgcatccatgtaa 437  Q
    |||||||| |||||||||||||| |||| ||||||||  |||  |||||||||||||| ||||| ||| ||||||||| || ||| |||||||    
T  35264324 aattgattttgagtgaattgattctgtaaaattgattgtaac-caaaagtgagttgaaagtaaagtgagttatgtttgggtacattcatgtaa 35264415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 52925775 - 52925723
Alignment:
Q  244 tcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctc 296  Q
    |||||||||||| |  ||| ||| |||||||||||||||||||||||||||||    
T  52925775 tcaaaattgattctagaggtgtataattgattttgacatgtttggttgctctc 52925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 51667074 - 51667144
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgattataac 315  Q
    ||||||||||| | |||  ||| || |||||||||||||||| | ||||||| |||| |||||||||||||    
T  51667074 caaaattgattttaaagatgtacaactgattttgacatgttttgatgctctcaagtataattgattataac 51667144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 3845275 - 3845210
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| |  ||| ||| |||||||||||||||||||| ||| |||| |||| ||||||||    
T  3845275 caaaattgattctagaggtgtagaattgattttgacatgtttgtttgatctcaagtagaattgatt 3845210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 21356787 - 21356856
Alignment:
Q  243 atcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgattat 312  Q
    |||||||||||||||  |   |||||||| |||||||||| |||||||| | || |||||||||||||||    
T  21356787 atcaaaattgattatagaaatgtaaaattaattttgacatatttggttgttgtcaagtaaaattgattat 21356856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 41115275 - 41115311
Alignment:
Q  346 aattgattgtgagtgaattgattttgtataattgatt 382  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  41115275 aattgattatgaatgaattgattttgtataattgatt 41115311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 310
Target Start/End: Original strand, 4336346 - 4336388
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  4336346 aattgattttgacatgtttggttggtctcgagtataattgatt 4336388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 5859226 - 5859160
Alignment:
Q  247 aaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgattata 313  Q
    ||||| |||||| ||| |||||||||||| ||| |||||| |||||| || ||||||||||||||||    
T  5859226 aaattaattatggaggtgtaaaattgattctgatatgtttagttgctttcaagtaaaattgattata 5859160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 490
Target Start/End: Original strand, 15677886 - 15677938
Alignment:
Q  438 cttcaaatcgaatcaattctattggaaagcaaccaaacatctgagaatcaatt 490  Q
    |||||| | |||||||||||||| |||||||||||||||| | ||||||||||    
T  15677886 cttcaagtagaatcaattctatttgaaagcaaccaaacatgtcagaatcaatt 15677938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 42455835 - 42455899
Alignment:
Q  246 aaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||| ||  ||| |||||||||||||||||||||||||| | |||||  |||||||    
T  42455835 aaaattgattatggagcagtagaattgattttgacatgtttggttgcttttgagtaggattgatt 42455899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 7602042 - 7602088
Alignment:
Q  347 attgattgtgagtgaattgattttgtataattgattcaaactaaaaa 393  Q
    ||||||| |||||||||||||||| || ||||||||| |||||||||    
T  7602042 attgattttgagtgaattgattttataaaattgattcgaactaaaaa 7602088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 12742207 - 12742273
Alignment:
Q  244 tcaaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||| ||||||  ||||||||| |||||||| ||  ||||||||||||| ||||||| ||||||||    
T  12742207 tcaaagttgattcagaaggcgtagaattgattatggtatgtttggttgctttcgagtagaattgatt 12742273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 18355760 - 18355798
Alignment:
Q  344 aaaattgattgtgagtgaattgattttgtataattgatt 382  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  18355760 aaaattgattttgagtgaattgattttgtaaaattgatt 18355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 39648285 - 39648243
Alignment:
Q  268 aattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||||||||||||||| ||||  |||||||||||||    
T  39648285 aattgattttgacatgtttggtttctctatagtaaaattgatt 39648243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 10368137 - 10368069
Alignment:
Q  346 aattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||| ||||||||||| ||||||| ||||||||   | | |||||||||||||||||||| |||||    
T  10368137 aattgattttgagtgaattgtttttgtaaaattgattttgagt-aaaagtgagttgaaggtaaagtgatt 10368069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 13418735 - 13418798
Alignment:
Q  344 aaaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaa 408  Q
    |||||||||| ||||||||||||||  ||| |||||||||  ||| |||||||||||||| ||||    
T  13418735 aaaattgattttgagtgaattgattaggtagaattgattctgact-aaaagtgagttgaatgtaa 13418798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 16972006 - 16972045
Alignment:
Q  375 aattgattcaaactaaaaagtgagttgaaggtaaaatgatt 415  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  16972006 aattgattcagactaaaa-gtgagttgaaggtaaaatgatt 16972045  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 35550349 - 35550309
Alignment:
Q  342 cgaaaattgattgtgagtgaattgattttgtataattgatt 382  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  35550349 cgaaaattgattttgattgaattgattttgtaaaattgatt 35550309  T

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Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 31748 - 31813
Alignment:
Q  245 caaaattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcgagtaaaattgatt 310  Q
    ||||||||||| |  ||| ||| |||||||| ||||||||||||||| | ||||||||||||||||    
T  31748 caaaattgattctagaggtgtagaattgattctgacatgtttggttgttgtcgagtaaaattgatt 31813  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 23753 - 23703
Alignment:
Q  248 aattgattatgaaggcgtaaaattgattttgacatgtttggttgctctcga 298  Q
    ||||||||||| ||| ||||| || |||||||||||||||||||| |||||    
T  23753 aattgattatggaggtgtaaagtttattttgacatgtttggttgccctcga 23703  T

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