View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5808-Insertion-6 (Length: 308)
Name: NF5808-Insertion-6
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5808-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 8 - 308
Target Start/End: Complemental strand, 11059907 - 11059607
Alignment:
| Q |
8 |
aaaacatccatcactctattcatgctatataacaaaatactataggcactaggcagtataaaataacaaccataaattggatcataagcactatgttatt |
107 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11059907 |
aaaacatccatcactctattcatgctatataacataatactataggcactaggcagtataaaataacaaccataaattggatcataagcactatgttatt |
11059808 |
T |
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| Q |
108 |
ttgaaactgattctactatgcataccacgatttgcagtagcctgtgcctcagccataaactcttcataagaagcctgaaaaaacaaccatatatattagt |
207 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11059807 |
ttgaaattgattctactatgcataccacgatttgcagtagcctgtgcctcagccataaactcttcataagaagcctgaaaaaacaaccatatatattagt |
11059708 |
T |
|
| Q |
208 |
ctcttaaatcttaatcaagttttttgaatgataatgaaggattaataaccttcatcgcctctcgactttcagtaatccgctcagacaacttcttgtaatc |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11059707 |
ctcttaaatcttaatcaagttttttgaatgataatgaaggattaataaccttcatcgcctctcgactttcagtaatccgctcagacaacttcttgtaatc |
11059608 |
T |
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| Q |
308 |
c |
308 |
Q |
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| T |
11059607 |
c |
11059607 |
T |
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