View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5808_low_28 (Length: 238)
Name: NF5808_low_28
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5808_low_28 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8948696 - 8948908
Alignment:
| Q |
1 |
gttttagttgccaaataacatgcataaattcgtccaacacggtcattaatgattgctctaaacaagacatgacgggggacaataatgagaagcaaatgat |
100 |
Q |
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| T |
8948696 |
gttttagttgccaaataacatgcataaattcgtccaacacggtcattaatgattgctctaaacaagacatgacgggggacaataatgagaagcaaatgat |
8948795 |
T |
|
| Q |
101 |
tttgaattatgttttaaaagtttactttctcatgtcctttttgtttcctacttgctctaaacaagacatgacgtgaaggtccatcaaagacgtgagtgga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
8948796 |
tttgaattatgttttaaaagtttactttctcatgtcctttttgtttcctacttgctctaaacaagacatgacgtgaaggtccaccaaagacgtgagtgga |
8948895 |
T |
|
| Q |
201 |
ggcaaaagttatc |
213 |
Q |
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||||||||||||| |
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| T |
8948896 |
ggcaaaagttatc |
8948908 |
T |
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