View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5808_low_31 (Length: 219)
Name: NF5808_low_31
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5808_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 14539098 - 14539279
Alignment:
| Q |
20 |
cctggtgcactgcttctcagagctggtgttatccatagaagctattgaagttgaagtgaaaccagtcataccaaattccctatcgtacgtatcaagtgtc |
119 |
Q |
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| T |
14539098 |
cctggtgcactgcttctcagagctggtgttatccatagaagctattgaagttgaagtgaaaccagtcataccaaattccctatcgtacgtatcaagtgtc |
14539197 |
T |
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| Q |
120 |
acttgttggctctgcctcccaaaggttgcactgccactcatactttggtccctaccgctccccgccacgtgtgccaccctcc |
201 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14539198 |
acttgctggctctgcctcccaaaggttgcactgccactcatactttggtccctaccgctccccgccacgtgtgccaccctcc |
14539279 |
T |
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