View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5809_high_16 (Length: 260)
Name: NF5809_high_16
Description: NF5809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5809_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 2556223 - 2555986
Alignment:
| Q |
14 |
cacctactacgatgaaaacaatgataatgaggttgagggg-ttgtttgatctcctcctgaaaaatgaaactttttcagatttttgccatttgtagtattg |
112 |
Q |
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| T |
2556223 |
cacctactacgatgaaaacaatgataatgaggttgagggggttgtttgatctcctcctgaaaaatgaaactttttcagatttttgtcatttgtagtattg |
2556124 |
T |
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| Q |
113 |
tggtgctatccaattgagaaagtgaaacatgaagctggagatttatttcggtggtttcttccattacgacgatgttaaggacaaccatggaagcggcaac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2556123 |
tggtgctatccaattgagaaagtgaaacatgaagctggagatttatttcggtggtttcttccattacgacgatgttaaggacaaccatggaagcggcaac |
2556024 |
T |
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| Q |
213 |
tatggattcatcaccggtgagaatggtcttgccctttg |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2556023 |
tatggattcatcaccggtgagaatggtcttgccctttg |
2555986 |
T |
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