View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5809_low_11 (Length: 322)

Name: NF5809_low_11
Description: NF5809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5809_low_11
NF5809_low_11
[»] chr3 (36 HSPs)
chr3 (20-312)||(1096639-1096931)
chr3 (140-243)||(34276435-34276539)
chr3 (142-242)||(12517286-12517387)
chr3 (142-232)||(2166035-2166125)
chr3 (142-232)||(19912586-19912677)
chr3 (141-242)||(18457110-18457212)
chr3 (139-242)||(8145244-8145348)
chr3 (146-242)||(25850952-25851049)
chr3 (139-242)||(8765670-8765774)
chr3 (139-242)||(8770560-8770664)
chr3 (139-242)||(13938843-13938947)
chr3 (142-243)||(16242194-16242295)
chr3 (145-243)||(22246992-22247090)
chr3 (151-243)||(12771211-12771304)
chr3 (153-240)||(8115305-8115393)
chr3 (142-219)||(22470402-22470480)
chr3 (142-242)||(18535766-18535867)
chr3 (139-210)||(52935530-52935602)
chr3 (195-242)||(20431468-20431515)
chr3 (244-312)||(11139215-11139284)
chr3 (244-312)||(22626959-22627028)
chr3 (139-243)||(8881399-8881503)
chr3 (142-219)||(2508719-2508797)
chr3 (140-193)||(7805787-7805841)
chr3 (141-201)||(819845-819906)
chr3 (142-201)||(27852603-27852663)
chr3 (139-191)||(4838956-4839010)
chr3 (154-220)||(12372344-12372411)
chr3 (141-180)||(27412657-27412696)
chr3 (153-242)||(14977802-14977892)
chr3 (258-312)||(18552507-18552561)
chr3 (145-242)||(19170144-19170242)
chr3 (142-180)||(20886927-20886965)
chr3 (141-210)||(20891644-20891714)
chr3 (142-242)||(3114709-3114810)
chr3 (139-176)||(18735298-18735335)
[»] chr4 (34 HSPs)
chr4 (140-243)||(17335353-17335457)
chr4 (142-242)||(15166464-15166565)
chr4 (142-243)||(19556541-19556641)
chr4 (143-243)||(9536756-9536857)
chr4 (155-242)||(7583788-7583876)
chr4 (153-242)||(10106291-10106381)
chr4 (141-242)||(17711302-17711404)
chr4 (142-242)||(12616710-12616811)
chr4 (142-242)||(22171744-22171845)
chr4 (143-212)||(8968072-8968142)
chr4 (142-243)||(18750819-18750921)
chr4 (139-238)||(17218529-17218628)
chr4 (142-210)||(25025134-25025203)
chr4 (139-242)||(11782488-11782592)
chr4 (139-201)||(17434471-17434534)
chr4 (141-242)||(9849706-9849808)
chr4 (142-220)||(14573467-14573545)
chr4 (142-242)||(15047763-15047864)
chr4 (142-242)||(15106560-15106661)
chr4 (155-243)||(20828152-20828241)
chr4 (141-242)||(11252128-11252230)
chr4 (244-309)||(647850-647915)
chr4 (244-309)||(651123-651188)
chr4 (139-180)||(22346138-22346179)
chr4 (273-309)||(12171515-12171551)
chr4 (171-242)||(16928920-16928992)
chr4 (141-180)||(17277904-17277943)
chr4 (139-242)||(4617090-4617194)
chr4 (21-99)||(14337397-14337475)
chr4 (139-242)||(25096296-25096397)
chr4 (141-193)||(13588753-13588806)
chr4 (185-242)||(17108714-17108771)
chr4 (142-201)||(1832054-1832114)
chr4 (140-180)||(22350238-22350278)
[»] chr7 (50 HSPs)
chr7 (141-242)||(8052428-8052529)
chr7 (142-242)||(3585522-3585623)
chr7 (138-242)||(18986740-18986845)
chr7 (138-242)||(19001368-19001473)
chr7 (141-242)||(11804694-11804796)
chr7 (142-242)||(2565902-2566003)
chr7 (141-242)||(9078880-9078983)
chr7 (142-242)||(4450667-4450768)
chr7 (151-243)||(5236875-5236968)
chr7 (142-242)||(26249075-26249176)
chr7 (151-242)||(8977479-8977571)
chr7 (142-243)||(23173685-23173787)
chr7 (142-242)||(13280755-13280856)
chr7 (139-243)||(39270270-39270374)
chr7 (139-247)||(19201449-19201558)
chr7 (142-241)||(10611710-10611810)
chr7 (142-243)||(3173705-3173807)
chr7 (142-243)||(6046522-6046624)
chr7 (142-242)||(9767781-9767882)
chr7 (244-312)||(294395-294463)
chr7 (135-200)||(1254689-1254754)
chr7 (153-242)||(144972-145061)
chr7 (142-242)||(2927870-2927971)
chr7 (141-193)||(10332449-10332502)
chr7 (244-312)||(23760255-23760324)
chr7 (139-242)||(13287707-13287811)
chr7 (273-312)||(33312524-33312563)
chr7 (139-244)||(19154812-19154918)
chr7 (139-244)||(20754211-20754317)
chr7 (244-309)||(6966681-6966746)
chr7 (244-309)||(17863741-17863806)
chr7 (244-309)||(17867000-17867065)
chr7 (139-211)||(19201319-19201392)
chr7 (142-242)||(23897236-23897337)
chr7 (244-309)||(24782939-24783004)
chr7 (151-209)||(3736365-3736424)
chr7 (151-193)||(9918212-9918255)
chr7 (151-193)||(9926124-9926167)
chr7 (152-242)||(10418553-10418644)
chr7 (273-312)||(11279022-11279061)
chr7 (146-242)||(21502850-21502948)
chr7 (152-201)||(9288947-9288997)
chr7 (152-201)||(9298739-9298789)
chr7 (139-180)||(2506817-2506858)
chr7 (139-207)||(6039294-6039363)
chr7 (141-193)||(9722486-9722539)
chr7 (139-180)||(13252704-13252745)
chr7 (139-180)||(17189707-17189748)
chr7 (142-189)||(1810953-1811001)
chr7 (142-210)||(7399356-7399424)
[»] chr8 (37 HSPs)
chr8 (142-242)||(20400330-20400431)
chr8 (139-243)||(29765388-29765494)
chr8 (142-242)||(13313271-13313372)
chr8 (139-242)||(17510900-17511004)
chr8 (151-242)||(15176441-15176533)
chr8 (142-241)||(19704983-19705083)
chr8 (144-242)||(24583173-24583272)
chr8 (142-242)||(29380960-29381062)
chr8 (142-242)||(23867829-23867930)
chr8 (142-243)||(24389751-24389853)
chr8 (142-242)||(28621600-28621701)
chr8 (139-242)||(18446856-18446960)
chr8 (156-242)||(24090892-24090979)
chr8 (142-242)||(19265818-19265919)
chr8 (142-242)||(24380353-24380454)
chr8 (139-242)||(26829463-26829567)
chr8 (139-193)||(13833600-13833655)
chr8 (142-243)||(24520002-24520104)
chr8 (140-200)||(21695411-21695472)
chr8 (139-242)||(17100203-17100307)
chr8 (142-200)||(5151957-5152016)
chr8 (142-201)||(24518588-24518647)
chr8 (142-242)||(26139784-26139885)
chr8 (142-180)||(6886729-6886767)
chr8 (142-243)||(26888481-26888583)
chr8 (139-180)||(21316842-21316883)
chr8 (141-239)||(24381324-24381424)
chr8 (142-242)||(25481505-25481606)
chr8 (142-193)||(17650006-17650058)
chr8 (151-202)||(24381995-24382047)
chr8 (141-180)||(14271900-14271939)
chr8 (142-220)||(22501851-22501930)
chr8 (142-180)||(28275324-28275362)
chr8 (145-210)||(30117661-30117727)
chr8 (154-239)||(18007535-18007620)
chr8 (139-200)||(24750864-24750925)
chr8 (71-111)||(43063019-43063059)
[»] chr1 (37 HSPs)
chr1 (142-242)||(15542308-15542409)
chr1 (142-242)||(729132-729233)
chr1 (142-242)||(21663090-21663191)
chr1 (142-242)||(18527496-18527597)
chr1 (142-241)||(22507381-22507482)
chr1 (141-243)||(12210260-12210363)
chr1 (142-220)||(27973321-27973400)
chr1 (141-242)||(21450763-21450865)
chr1 (142-242)||(22624612-22624713)
chr1 (244-309)||(32506500-32506565)
chr1 (142-217)||(14782551-14782627)
chr1 (140-243)||(18734583-18734687)
chr1 (142-242)||(18832211-18832312)
chr1 (142-242)||(22426515-22426616)
chr1 (142-242)||(26611331-26611432)
chr1 (140-220)||(26647355-26647436)
chr1 (244-309)||(27282754-27282819)
chr1 (141-220)||(15158787-15158867)
chr1 (139-242)||(25402432-25402536)
chr1 (142-209)||(33192381-33192449)
chr1 (137-242)||(16817103-16817209)
chr1 (146-218)||(28009766-28009839)
chr1 (186-242)||(9403630-9403686)
chr1 (139-242)||(18827392-18827496)
chr1 (142-200)||(17365809-17365868)
chr1 (157-242)||(16180714-16180799)
chr1 (244-309)||(10759655-10759720)
chr1 (142-242)||(21333071-21333172)
chr1 (141-243)||(16915194-16915298)
chr1 (152-242)||(16363619-16363710)
chr1 (142-188)||(24464664-24464711)
chr1 (140-189)||(27912113-27912163)
chr1 (20-98)||(31431442-31431520)
chr1 (244-309)||(13495521-13495586)
chr1 (197-242)||(15630979-15631024)
chr1 (142-210)||(24901237-24901306)
chr1 (142-210)||(25959459-25959528)
[»] chr6 (39 HSPs)
chr6 (141-243)||(14641627-14641730)
chr6 (139-242)||(17384019-17384123)
chr6 (146-243)||(17822027-17822126)
chr6 (141-243)||(19593974-19594078)
chr6 (142-242)||(22404254-22404355)
chr6 (140-243)||(9519727-9519831)
chr6 (143-242)||(24469794-24469894)
chr6 (176-243)||(19577572-19577639)
chr6 (142-242)||(24480020-24480121)
chr6 (243-309)||(32426902-32426968)
chr6 (144-220)||(9841037-9841114)
chr6 (141-243)||(1636629-1636731)
chr6 (142-242)||(14078033-14078135)
chr6 (142-242)||(14076392-14076493)
chr6 (151-242)||(22564558-22564650)
chr6 (153-243)||(22845862-22845953)
chr6 (142-243)||(17847775-17847877)
chr6 (142-210)||(21687129-21687198)
chr6 (142-242)||(21760407-21760508)
chr6 (152-239)||(14723683-14723771)
chr6 (142-220)||(4340682-4340761)
chr6 (142-243)||(9848158-9848260)
chr6 (151-242)||(21845737-21845830)
chr6 (244-312)||(13017836-13017905)
chr6 (244-309)||(14790152-14790217)
chr6 (244-309)||(15534622-15534687)
chr6 (244-312)||(22221254-22221323)
chr6 (244-312)||(22247089-22247158)
chr6 (244-309)||(32704900-32704965)
chr6 (161-242)||(21152510-21152592)
chr6 (244-309)||(1838007-1838072)
chr6 (140-180)||(7543116-7543157)
chr6 (141-201)||(14727171-14727232)
chr6 (244-309)||(14795180-14795245)
chr6 (143-180)||(17379461-17379498)
chr6 (147-242)||(2588292-2588388)
chr6 (142-193)||(9897868-9897920)
chr6 (143-242)||(23644318-23644418)
chr6 (139-202)||(26820896-26820960)
[»] chr2 (27 HSPs)
chr2 (139-240)||(28918186-28918288)
chr2 (140-242)||(17350974-17351077)
chr2 (142-243)||(26313173-26313275)
chr2 (154-242)||(18758297-18758386)
chr2 (139-242)||(27907519-27907623)
chr2 (142-243)||(21905721-21905823)
chr2 (146-242)||(24086310-24086407)
chr2 (142-242)||(35680100-35680201)
chr2 (244-309)||(36326458-36326523)
chr2 (141-220)||(17891749-17891829)
chr2 (139-242)||(25532232-25532336)
chr2 (139-242)||(25886188-25886292)
chr2 (142-243)||(34574508-34574611)
chr2 (244-312)||(40017508-40017576)
chr2 (142-220)||(23010043-23010122)
chr2 (142-243)||(29144629-29144732)
chr2 (151-243)||(22569049-22569142)
chr2 (143-242)||(18120546-18120646)
chr2 (140-242)||(25196607-25196710)
chr2 (250-312)||(31626077-31626140)
chr2 (143-242)||(28930270-28930371)
chr2 (244-312)||(31527919-31527988)
chr2 (244-312)||(13709602-13709670)
chr2 (147-242)||(27540270-27540366)
chr2 (142-200)||(16157084-16157143)
chr2 (142-242)||(25537552-25537653)
chr2 (141-201)||(18970774-18970833)
[»] scaffold0016 (1 HSPs)
scaffold0016 (142-242)||(4820-4921)
[»] chr5 (34 HSPs)
chr5 (142-242)||(19003765-19003866)
chr5 (142-242)||(23387547-23387648)
chr5 (139-243)||(20860334-20860439)
chr5 (143-242)||(24320522-24320623)
chr5 (142-242)||(29987952-29988054)
chr5 (142-242)||(34132082-34132183)
chr5 (139-242)||(19053097-19053201)
chr5 (152-243)||(28666487-28666579)
chr5 (144-242)||(22797422-22797521)
chr5 (142-232)||(25400738-25400829)
chr5 (142-242)||(23338888-23338988)
chr5 (142-242)||(26069245-26069346)
chr5 (153-243)||(17469569-17469660)
chr5 (139-201)||(25572475-25572538)
chr5 (145-242)||(24162014-24162112)
chr5 (20-64)||(5998797-5998841)
chr5 (141-220)||(23214824-23214904)
chr5 (142-201)||(23266853-23266913)
chr5 (139-210)||(34488885-34488957)
chr5 (273-312)||(15532877-15532916)
chr5 (273-312)||(15543059-15543098)
chr5 (152-242)||(25920827-25920918)
chr5 (273-312)||(33574618-33574657)
chr5 (243-309)||(14617074-14617140)
chr5 (146-202)||(15691304-15691361)
chr5 (140-193)||(17831739-17831792)
chr5 (139-210)||(31600072-31600144)
chr5 (200-243)||(16521962-16522005)
chr5 (142-220)||(23110196-23110275)
chr5 (183-242)||(24658342-24658401)
chr5 (142-199)||(19761581-19761639)
chr5 (244-309)||(34405382-34405447)
chr5 (140-180)||(24513194-24513234)
chr5 (142-243)||(26315180-26315283)
[»] scaffold0258 (1 HSPs)
scaffold0258 (142-242)||(20252-20353)
[»] scaffold0555 (1 HSPs)
scaffold0555 (142-242)||(6449-6550)
[»] scaffold0014 (1 HSPs)
scaffold0014 (142-242)||(192118-192219)
[»] scaffold0056 (1 HSPs)
scaffold0056 (139-238)||(23036-23136)
[»] scaffold0032 (1 HSPs)
scaffold0032 (142-217)||(92828-92904)
[»] scaffold0043 (1 HSPs)
scaffold0043 (139-201)||(88433-88496)
[»] scaffold0002 (1 HSPs)
scaffold0002 (176-243)||(95619-95686)
[»] scaffold0440 (1 HSPs)
scaffold0440 (243-312)||(9539-9609)
[»] scaffold0386 (1 HSPs)
scaffold0386 (144-209)||(4874-4940)
[»] scaffold0005 (1 HSPs)
scaffold0005 (142-220)||(243831-243909)
[»] scaffold0111 (1 HSPs)
scaffold0111 (142-242)||(21436-21537)
[»] scaffold0019 (1 HSPs)
scaffold0019 (198-242)||(182568-182612)
[»] scaffold0500 (1 HSPs)
scaffold0500 (273-312)||(2221-2260)
[»] scaffold0451 (1 HSPs)
scaffold0451 (142-243)||(5725-5827)
[»] scaffold0352 (1 HSPs)
scaffold0352 (274-312)||(3284-3322)
[»] scaffold0024 (1 HSPs)
scaffold0024 (142-242)||(41335-41435)
[»] scaffold0063 (1 HSPs)
scaffold0063 (273-312)||(7669-7708)
[»] scaffold0665 (1 HSPs)
scaffold0665 (244-309)||(291-356)
[»] scaffold0115 (1 HSPs)
scaffold0115 (154-209)||(36143-36199)


Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 20 - 312
Target Start/End: Original strand, 1096639 - 1096931
Alignment:
Q  20 gtattggacaaccatctttcaaaaatacatgaacaaaatgattggcagttcagccaatacacataatgttggtatttgggttaagtggtggacgactttt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1096639 gtattggacaaccatctttcaaaaatacatgaacaaaatgattgggagttcagccaatacacataatgttggtatttgagttaagtggtggacgactttt 1096738  T
Q  120 gattactcagtaataatgtttgtgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagt 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |    
T  1096739 gattactcagtaataatgtttgtgatgacaggtcatcttacgttattctttgcatgtttttagtcattttcagtcagttttagcagcaaaaaggaggatt 1096838  T
Q  220 actacaacgattgcctatgattttcatagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1096839 actagaacgattgcctatgattttcatagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagtataa 1096931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 34276435 - 34276539
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    |||||||||| ||||| ||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  34276435 tgtgatgacaggtcattttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattataacgattgcctatg 34276534  T
Q  239 atttt 243  Q
    |||||    
T  34276535 atttt 34276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 12517387 - 12517286
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||||||||||||| |||||||| ||||||||||||||||| || || |||||||||||||    
T  12517387 tgatgacaggtcatcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaaggaggagtattagaatgattgcctatgat 12517288  T
Q  241 tt 242  Q
    ||    
T  12517287 tt 12517286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 2166035 - 2166125
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattg 232  Q
    |||||||| |||||  ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| || ||||||||    
T  2166035 tgatgacaggtcatgatacgttattcttggcatgttttttgtcattttcagtaggttttagcaacaaaaaggaggagtattaaaacgattg 2166125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 19912677 - 19912586
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattg 232  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||| |||||||| || ||||||||    
T  19912677 tgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaagaggagtattagaacgattg 19912586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 18457110 - 18457212
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||| ||||||||||| ||||||| | ||||| || ||| ||||||||| |||||||||||||||||||||||||| || ||| |||||||||||    
T  18457110 gtgatgacaggtcatcttacgctattcttaggatgttattcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatga 18457209  T
Q  240 ttt 242  Q
    |||    
T  18457210 ttt 18457212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 8145348 - 8145244
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||| ||||| |||||||||| |||||||| |||||||||| | ||| ||||||| ||||||||||||||||| |||||||| || ||| |||||||||    
T  8145348 ttgtgctgacaggtcatcttacattattcttagcatgtttttcaatcaatttcagtaggttttagcagcaaaaatgaggagtattaaaacaattgcctat 8145249  T
Q  238 gattt 242  Q
    |||||    
T  8145248 gattt 8145244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 25850952 - 25851049
Alignment:
Q  146 gacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||| ||||||||| ||||||||| |||||||||| ||| ||||| ||| || |||||||||| |||||||||||| || ||||||||||||||||||    
T  25850952 gacaggtcatcttatgttattcttagcatgtttttcagttatttttagtaggatttagcagcagaaaggaggagtattaaaacgattgcctatgattt 25851049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 8765774 - 8765670
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| |  ||||| |||||||||||| |||||||||| ||||||||||| | ||||||||| ||||||| |||||||| || ||||||| |||||    
T  8765774 ttgtgatgatagatcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctat 8765675  T
Q  238 gattt 242  Q
    |||||    
T  8765674 gattt 8765670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 8770664 - 8770560
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| |  ||||| |||||||||||| |||||||||| ||||||||||| | ||||||||| ||||||| |||||||| || ||||||| |||||    
T  8770664 ttgtgatgatagatcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctat 8770565  T
Q  238 gattt 242  Q
    |||||    
T  8770564 gattt 8770560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 13938843 - 13938947
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgtttttagt-cattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||   || ||||||| |||||||||| ||||||||||||||| || |||||||||| ||    
T  13938843 ttgtgatgacaggtcattttacgttattcttagcatgttgttaaagcaatttcagtaggttttagcaccaaaaaggaggagtattagaacgattgccaat 13938942  T
Q  238 gattt 242  Q
    |||||    
T  13938943 gattt 13938947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 16242194 - 16242295
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||| ||||| | ||||||| ||| | ||||||||| |||||| ||||||| || ||||||||||||||||    
T  16242194 tgatgacaggtcatcttacgttattcttagcatatttttcactcatttttagtag-ttttagcagaaaaaagaaggagtattagaacgattgcctatgat 16242292  T
Q  241 ttt 243  Q
    |||    
T  16242293 ttt 16242295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 22247090 - 22246992
Alignment:
Q  145 tgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||| ||||||||||||||||||| |||| |||| ||||||||||||| ||||||| ||||||||  |||||||| || | | |||| ||||||||||    
T  22247090 tgacatgtcatcttacgttattcttagcattttttcagtcattttcagtaggttttaccagcaaaatagaggagtattagagcaattgactatgatttt 22246992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 12771211 - 12771304
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||||||||||||||||| |||||||||| |||||||||||||   ||||||||||||||| || ||||| || ||||||| ||| |||||||    
T  12771211 gtcatcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaaatgatgagtattagaacgatttcctgtgatttt 12771304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 8115305 - 8115393
Alignment:
Q  153 catcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||||||||| || |||||||||  ||| ||||| ||| |||||||| ||||||||||||||||| || ||||||||||||||||    
T  8115305 catcttacgttatttttagcatgttttccagttattttgagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatgat 8115393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 22470402 - 22470480
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagt 219  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||||||||||  |||||| ||||||||  |||||||    
T  22470402 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaacagaggagt 22470480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 18535867 - 18535766
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||| ||| ||||||| |||||||   |||||||| || | | ||||| ||||||    
T  18535867 tgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagcagaggagtattagatcaattgcttatgat 18535768  T
Q  241 tt 242  Q
    ||    
T  18535767 tt 18535766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 52935530 - 52935602
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    ||||||||| | ||||||||||||||||||| |||||||||| | ||||||||||| ||||||| ||||||||    
T  52935530 ttgtgatgataggtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaa 52935602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 20431515 - 20431468
Alignment:
Q  195 ggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  20431515 ggttttagcagcaaaaaggaggagtattagaacgattgcctatgattt 20431468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 11139215 - 11139284
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| |||||  ||||||||||| |||||||||||||| |||||||||||||    
T  11139215 cataggattacatcagattcatctcaagaattaaccacaaaagaattagttactcaaagctaaagtataa 11139284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 22626959 - 22627028
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||||    
T  22626959 cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataa 22627028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 8881399 - 8881503
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||| | ||||||||||||||||||| ||||| ||| |||   ||| ||| |    ||||| ||||||||||||||| || ||||||||||||||    
T  8881399 ttgtgatgatatgtcatcttacgttattcttagcatgctttcagtttattttagtagaaaatagcaacaaaaaggaggagtattagaacgattgcctatg 8881498  T
Q  239 atttt 243  Q
    |||||    
T  8881499 atttt 8881503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 2508719 - 2508797
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagt 219  Q
    ||||| || ||||||||||||||||||| | |||||||| |||||||||||||  |||||| |||| ||||||| ||||    
T  2508719 tgatggcatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaagttttaacagcgaaaaggatgagt 2508797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 7805841 - 7805787
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    |||||||||| ||||||||||||||||||| |||||||||| | |||||||||||    
T  7805841 tgtgatgacaggtcatcttacgttattcttagcatgtttttcaatcattttcagt 7805787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 819845 - 819906
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    ||||||| | ||||||||||||||||||| |||||||||| ||||| ||||||| |||||||    
T  819845 gtgatgataggtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggtttta 819906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 27852603 - 27852663
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgt-ttttagtcattttcagtcggtttta 201  Q
    |||||||| ||| |||||||||||| || |||||| ||||||||||||||||| |||||||    
T  27852603 tgatgacatgtcgtcttacgttatttttagcatgtcttttagtcattttcagtaggtttta 27852663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 4839010 - 4838956
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttca 191  Q
    ||||||| |||  |||||||||||||||||||||||||||||  |||||||||||    
T  4839010 ttgtgataacatatcatcttacgttattcttggcatgtttttccagtcattttca 4838956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 12372344 - 12372411
Alignment:
Q  154 atcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||| |||||| |||| ||||| | ||||||||||| |||||||  |||||||||||||||||    
T  12372344 atcttacgtaattcttagcatttttttcaatcattttcagtaggttttacgagcaaaaaggaggagta 12372411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 27412657 - 27412696
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  27412657 gtgatgacaagtcatcttacgttatttttagcatgttttt 27412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 14977892 - 14977802
Alignment:
Q  153 catcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||||| |||| ||||| |||   ||| |||  | ||||| ||||||||||||||||| || ||| ||||||||||||||    
T  14977892 catcttacgttattcttagcatatttttcagtttattttagtatgatttagtagcaaaaaggaggagtattataacaattgcctatgattt 14977802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 18552561 - 18552507
Alignment:
Q  258 agattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    |||||||| ||| ||||||| |||| | |||||||||||||||||||||| ||||    
T  18552561 agattcatctcaggcttaactacaatgaaattagttactcatagctaaagcataa 18552507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 19170144 - 19170242
Alignment:
Q  145 tgacaagtcatcttacgttattcttggcatgtttttag-tcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||| |||||||| |  ||||||| |||||||||| | ||| ||||||| ||||||||||| ||||| |||||||| || ||| ||| |||| |||||    
T  19170144 tgacatgtcatcttgcactattcttagcatgtttttcggtcaatttcagttggttttagcagaaaaaacgaggagtattaaaacaatttcctacgattt 19170242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 20886965 - 20886927
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  20886965 tgatgacaggtcatcttacgttattcttagcatgttttt 20886927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 20891644 - 20891714
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    |||||| || ||||||||||||||||||| |||| ||||| |||| |||||||| ||||||| || |||||    
T  20891644 gtgatggcaggtcatcttacgttattcttagcatatttttcagtcgttttcagtaggttttaccaacaaaa 20891714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 3114709 - 3114810
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||| || ||||| | ||||||||||| |||||||||| |||| ||| |||| ||||||| ||||||||  |||||||| || |   ||||||||||||    
T  3114709 tgatggcaggtcatgtgacgttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaacagaggagtattagagtaattgcctatgat 3114808  T
Q  241 tt 242  Q
    ||    
T  3114809 tt 3114810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 18735298 - 18735335
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgt 176  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  18735298 ttgtgatgacaggtcatcttacgttattcttagcatgt 18735335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 17335353 - 17335457
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||| || ||||||||||||||    
T  17335353 tgtgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattagaacgattgcctatg 17335452  T
Q  239 atttt 243  Q
    |||||    
T  17335453 atttt 17335457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 15166565 - 15166464
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||||||| |||||||| || ||||||||||| ||||    
T  15166565 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaacgaggagtattagaacgattgcctgtgat 15166466  T
Q  241 tt 242  Q
    ||    
T  15166465 tt 15166464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 19556541 - 19556641
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatt 241  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||||| | |||||||||| ||| |||| |||||| || |||||||||||||||||    
T  19556541 tgatgacaggtcatcttacgttattcttagcatgttttcagtcattttcaataggttttagcaccaataagg-ggagtattagaacgattgcctatgatt 19556639  T
Q  242 tt 243  Q
    ||    
T  19556640 tt 19556641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 9536756 - 9536857
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatt 241  Q
    ||||||| ||| ||||| ||||||||| |||||||||| | | ||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||||    
T  9536756 gatgacaggtcctcttatgttattcttagcatgtttttcaattattttcagtaggttttagcagcaaaaaggaggagtattacaacaattacctatgatt 9536855  T
Q  242 tt 243  Q
    ||    
T  9536856 tt 9536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 7583876 - 7583788
Alignment:
Q  155 tcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||| |||| ||||| | ||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||    
T  7583876 tcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatgattt 7583788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 10106381 - 10106291
Alignment:
Q  153 catcttacgttattcttggcatgttttta-gtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||| |||||||| ||||||||||  |||||||||||| ||||||||| |||||||||||||||| |||||| |||| |||||||||    
T  10106381 catcttacattattcttagcatgtttttctgtcattttcagtaggttttagctgcaaaaaggaggagtattacaacaattgtctatgattt 10106291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 17711404 - 17711302
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||| ||||  |||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||||| |||||||| || ||||||||||||| |    
T  17711404 gtgatgacaggtcaaattacattattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaatgaggagtattagaacgattgcctataa 17711305  T
Q  240 ttt 242  Q
    |||    
T  17711304 ttt 17711302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 12616811 - 12616710
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||||| ||||||  ||||||||| |||| |||||||| |||||||||||||||||||| ||||| || ||| ||| ||||||||    
T  12616811 tgatgacatgtcatcttacgtaattcttaacatgtttttcagtctttttcagtaggttttagcagcaaaaaggatgagtattagaacaatttcctatgat 12616712  T
Q  241 tt 242  Q
    ||    
T  12616711 tt 12616710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 22171845 - 22171744
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtc-attttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||| |||||||| ||||||||||   | ||||||| | |||||||||||||||||||||||||| || || |||||||||||||    
T  22171845 tgatgacaggtcatcttacattattcttagcatgtttttctgctattttcattaggttttagcagcaaaaaggaggagtattagaatgattgcctatgat 22171746  T
Q  241 tt 242  Q
    ||    
T  22171745 tt 22171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 8968072 - 8968142
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaag 212  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||    
T  8968072 gatgacatgtcatcttacgttattcttagcatgtttttcagtcattttaagtaggttttagcagcaaaaag 8968142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 18750921 - 18750819
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||| ||||| || |||| ||||| ||| ||||||||| || ||||||||||||||||||||||| || | | ||||||||||||    
T  18750921 tgatgacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 18750822  T
Q  241 ttt 243  Q
    |||    
T  18750821 ttt 18750819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 17218628 - 17218529
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| | ||||||||||||||||||| |||||||||| |||||  ||||||  ||||| | ||||||||||||||||| || |||||||||||||    
T  17218628 ttgtgatgataggtcatcttacgttattcttagcatgtttttcagtca-attcagtaagttttcgaagcaaaaaggaggagtattagaacgattgcctat 17218530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 25025203 - 25025134
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||||||| ||| ||||||| ||||||||    
T  25025203 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaa 25025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 11782592 - 11782488
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| | |||||||||||||||||||  ||||||||| ||||||||| ||| ||||||  |||||||||| | ||||| || |||||||| || |    
T  11782592 ttgtgatgataggtcatcttacgttattcttaacatgttttttagtcattttaagtaggtttttacagcaaaaagtaagagtattagaacgattgtctgt 11782493  T
Q  238 gattt 242  Q
    |||||    
T  11782492 gattt 11782488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 17434534 - 17434471
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    ||||||||||| |||||||||||||||| || |||||||||| ||||||||||||| |||||||    
T  17434534 ttgtgatgacaggtcatcttacgttatttttagcatgtttttaagtcattttcagtaggtttta 17434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 9849706 - 9849808
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||| ||||||||||||||||||| | |||||||| ||||||||| ||| ||||||| || |||||   ||||||| || | | |||||||||||    
T  9849706 gtgatgacaggtcatcttacgttattcttagtatgtttttcagtcatttttagtaggttttaccaacaaaacaaaggagtattagatcaattgcctatga 9849805  T
Q  240 ttt 242  Q
    |||    
T  9849806 ttt 9849808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 14573545 - 14573467
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||  |||||||||||||||||| |||| |||||||||||||| ||| |||||||  |||||||  ||||||||    
T  14573545 tgatgacatatcatcttacgttattcttagcatatttttagtcattttaagtaggttttactagcaaaacagaggagta 14573467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 15047864 - 15047763
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||| ||||||| ||||||| | ||| ||   |||  ||||| |||||||| |||||||    
T  15047864 tgatgacaattcattttacgttattcttggcatgtttttcagtcaatttcagtaggttttatccgcataacaaaggtttactagaacgattgactatgat 15047765  T
Q  241 tt 242  Q
    ||    
T  15047764 tt 15047763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 15106560 - 15106661
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||| ||||||| ||||||| | ||| ||   |||  ||||| |||||||| |||||||    
T  15106560 tgatgacaattcattttacgttattcttggcatgtttttcagtcaatttcagtaggttttatccgcataacaaaggtttactagaacgattgactatgat 15106659  T
Q  241 tt 242  Q
    ||    
T  15106660 tt 15106661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 20828152 - 20828241
Alignment:
Q  155 tcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||||||||||||| |||| ||||| |||| |||||| | ||| ||||||||||||   ||||||| |||||| |||||||||||||||    
T  20828152 tcttacgttattcttagcatctttttcagtctttttcaataggtattagcagcaaaataaaggagtattacaacaattgcctatgatttt 20828241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 11252128 - 11252230
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||| |||||||||||||||| || |||||||||| |||   ||| ||| || |||||||  |||||  ||||||| || |||||||||||||||    
T  11252128 gtgatgacaggtcatcttacgttatttttagcatgtttttcagtttattttagtaggatttagcaaaaaaaaaaaggagtattagaacgattgcctatga 11252227  T
Q  240 ttt 242  Q
    |||    
T  11252228 ttt 11252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 647850 - 647915
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  647850 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 647915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 651123 - 651188
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  651123 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 651188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 22346179 - 22346138
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  22346179 ttgtgatgacaagtcatcttacgttattcttagcatattttt 22346138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 12171551 - 12171515
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12171551 ttaaccacaaaagaattagttactcatagctaaagta 12171515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 16928992 - 16928920
Alignment:
Q  171 gcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||||| ||||||||||||| ||||||||| ||||||| |||||||| || || ||||| |||| ||||    
T  16928992 gcatgtttttcagtcattttcagtaggttttagcggcaaaaatgaggagtattagaatgattgtctataattt 16928920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 17277943 - 17277904
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  17277943 gtgatgacatgtcatcttacgttattcttagcatgttttt 17277904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 4617194 - 4617090
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatg--tttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgccta 236  Q
    ||||||||||| ||||||||||||||||||| || ||  |||||||| | ||| ||| ||   ||| ||||||||||||||||| || || |||| ||||    
T  4617194 ttgtgatgacaggtcatcttacgttattcttagcttgtttttttagtaaattt-agtaggaaatagaagcaaaaaggaggagtattagaaagattaccta 4617096  T
Q  237 tgattt 242  Q
    ||||||    
T  4617095 tgattt 4617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 14337397 - 14337475
Alignment:
Q  21 tattggacaaccatctttcaaaaatacatgaacaaaatgattggcagttcagccaatacacataatgttggtatttggg 99  Q
    ||||||| ||||||||||||||||| |||||||||| ||||      || |||||| ||||||||||| ||||||||||    
T  14337397 tattggataaccatctttcaaaaatgcatgaacaaagtgatcatgtattaagccaagacacataatgtaggtatttggg 14337475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 25096397 - 25096296
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgtttt-tagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||||||||| ||||| |||||||||  ||| ||||||||| ||   | |||||||||    |||||| || |||||||||||||    
T  25096397 ttgtgatgacatgtcatcttacgttgttcttagcatgttttacagtaattttcagtaggaaattgcagcaaaa---tggagtattagaacgattgcctat 25096301  T
Q  238 gattt 242  Q
    |||||    
T  25096300 gattt 25096296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 13588806 - 13588753
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    |||||||||| ||||||||||||||| || |||||||||| | |||||||||||    
T  13588806 gtgatgacaaatcatcttacgttattattagcatgtttttcaatcattttcagt 13588753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 17108771 - 17108714
Alignment:
Q  185 attttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||| ||||||| |||||||||||| ||||| || ||  ||||||||||||||    
T  17108771 attttcagtaggttttaacagcaaaaaggatgagtattagaaaaattgcctatgattt 17108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 1832054 - 1832114
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||| || ||| |||||||    
T  1832054 tgatgacatgtcatcttatgttattctaggcatgtttttcagtcatattaagtaggtttta 1832114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 22350238 - 22350278
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  22350238 tgtgatgacaaatcatcttacattattcttagcatgttttt 22350278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 8052428 - 8052529
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||| || || |||||||||||||    
T  8052428 gtgatgacaaatcatcttacgttattcttagcatgttttcagtcattttcagtaggttttagcagcaaaaatgaggagtattagaatgattgcctatgat 8052527  T
Q  241 tt 242  Q
    ||    
T  8052528 tt 8052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 3585522 - 3585623
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||||||||||||| |||||||| |||||||||| | ||||||||||| |||||||||||||||| ||||||||| || || |||||||||||||    
T  3585522 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 3585621  T
Q  241 tt 242  Q
    ||    
T  3585622 tt 3585623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 18986740 - 18986845
Alignment:
Q  138 tttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgccta 236  Q
    ||||||||||||  |||||||||||||||||| |||||||||| ||||| ||||||| | |||||||||||||||||||||||| || ||||| ||||||    
T  18986740 tttgtgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgccta 18986839  T
Q  237 tgattt 242  Q
    ||||||    
T  18986840 tgattt 18986845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 19001368 - 19001473
Alignment:
Q  138 tttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgccta 236  Q
    ||||||||||||  |||||||||||||||||| |||||||||| ||||| ||||||| | |||||||||||||||||||||||| || ||||| ||||||    
T  19001368 tttgtgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgccta 19001467  T
Q  237 tgattt 242  Q
    ||||||    
T  19001468 tgattt 19001473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 11804796 - 11804694
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||||  |||||||||||||||| |  ||||||||| ||||||||||||| ||||||||||||||||||||| |||| || |||||||||||||||    
T  11804796 gtgatgacagatcatcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaaggagcagtattagaacgattgcctatga 11804697  T
Q  240 ttt 242  Q
    |||    
T  11804696 ttt 11804694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 2566003 - 2565902
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||| |||  |||||||||||||| || |||||||| |||||||    
T  2566003 tgatgacaagtcatcttacgatattcttagcatgtttttcagtcattttcagtaggttttggcaagaaaaaggaggagtattataacgattgtctatgat 2565904  T
Q  241 tt 242  Q
    ||    
T  2565903 tt 2565902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 9078880 - 9078983
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||| ||||||||||||||||||| ||||||||||  ||| ||||||||| ||||| |||||||||||||||||||| |  |||||||| |||||    
T  9078880 gtgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggtttcagcagcaaaaaggaggagtattggaacgattgtctatg 9078979  T
Q  239 attt 242  Q
    ||||    
T  9078980 attt 9078983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 4450768 - 4450667
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  |||||||||||||||||| |||||||||  ||||||||||||| |||||||||| ||||| ||||||||| || ||||||||||| ||||    
T  4450768 tgatgacagatcatcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaacaaaatggaggagtattagaacgattgcctgtgat 4450669  T
Q  241 tt 242  Q
    ||    
T  4450668 tt 4450667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 5236875 - 5236968
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||| | || ||| ||| |||||||||||    
T  5236875 gtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggaggattagaacaatttcctatgatttt 5236968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 26249075 - 26249176
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||| ||||| || ||| ||||  ||||||    
T  26249075 tgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtttatgat 26249174  T
Q  241 tt 242  Q
    ||    
T  26249175 tt 26249176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 8977479 - 8977571
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||||||| |||| ||||| | ||||||||||| |||||||||||||||||||||||||| || ||| | ||||||||||||    
T  8977479 gtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaactgcctatgattt 8977571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 23173685 - 23173787
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| ||| ||||| | | ||||||||| |||||||||||||||| || ||| |||| |||||||    
T  23173685 tgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattgtctatgat 23173784  T
Q  241 ttt 243  Q
    |||    
T  23173785 ttt 23173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 13280856 - 13280755
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| | | | ||||||| |||||||||||||||||| | ||||| || || |||||||||||||    
T  13280856 tgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggttttagcagcaaaaagaacgagtattagaatgattgcctatgat 13280757  T
Q  241 tt 242  Q
    ||    
T  13280756 tt 13280755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 39270270 - 39270374
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||||||||||| ||| |||||||||| ||||||||| |||  |||||||||| |||||||||||||| || ||||||||||  |    
T  39270270 ttgtgatgacatgtcatcttacgttat-cttagcatgtttttcagtcatttttagtaagttttagcagtaaaaaggaggagtattagaacgattgcccgt 39270368  T
Q  238 gatttt 243  Q
    ||||||    
T  39270369 gatttt 39270374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 19201558 - 19201449
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttta-gtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||||| |||||||||  |||||||||  || ||||||||| || |||||||||||||||| ||| || || |||||||||||||    
T  19201558 ttgtgatgacaggtcatcttatgttattcttaacatgtttttctgttattttcagtaggatttagcagcaaaaaggtggactattagaacgattgcctat 19201459  T
Q  238 gattttcata 247  Q
    | ||| ||||    
T  19201458 gttttccata 19201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 10611810 - 10611710
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  ||||||| |||||||||| |||||||| | ||| ||||| | | |||||||||||||||||||| ||||| || ||||||||||||||||    
T  10611810 tgatgacatatcatcttgcgttattcttagcatgtttctcagtgattttaaataggttttagcagcaaaaaggatgagtattagaacgattgcctatgat 10611711  T
Q  241 t 241  Q
    |    
T  10611710 t 10611710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 3173807 - 3173705
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  ||||||| |||||||||| |||||||||| ||||||||||| | ||||| ||||| |||  ||||||||| || || |||||||||||||    
T  3173807 tgatgacagatcatcttgcgttattcttagcatgtttttcagtcattttcattaggtttcagcagtaaatgggaggagtattagaaagattgcctatgat 3173708  T
Q  241 ttt 243  Q
    |||    
T  3173707 ttt 3173705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 6046624 - 6046522
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||| ||||||||||| |||||||||  ||||||||| |||||||||||||  ||| ||||||| ||||||||||||| |  ||  ||||||||||||    
T  6046624 tgatgataagtcatcttatgttattcttaacatgttttttagtcattttcagtaagttgtagcagctaaaaggaggagtatttgaattattgcctatgat 6046525  T
Q  241 ttt 243  Q
    |||    
T  6046524 ttt 6046522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 9767882 - 9767781
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||| ||||||||||| |||||||||| || |||||||||| ||||||| ||| ||||  |||||||| || | | ||||||||||||    
T  9767882 tgatgacaggtcatctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaatagaggagtattagatcaattgcctatgat 9767783  T
Q  241 tt 242  Q
    ||    
T  9767782 tt 9767781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 294463 - 294395
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| | ||||||||||  ||||||||||||||||||||||||||||    
T  294463 cataggattacatcagattcatctcaggattaaccacaagagaattagttactcatagctaaagtataa 294395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 1254689 - 1254754
Alignment:
Q  135 atgtttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttt 200  Q
    |||||| ||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||    
T  1254689 atgtttatgatgacaagtcatcttacgttatt-ttagcatgtttttcagtcattttcagttggtttt 1254754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 145061 - 144972
Alignment:
Q  153 catcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||| |||||||||  |||||||| ||||||||| ||| ||||||| |||||||| ||| ||||| || | | ||||||||||||||    
T  145061 catcttatgttattcttaacatgttttcagtcatttttagtaggttttaccagcaaaacggatgagtattagagcaattgcctatgattt 144972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 2927971 - 2927870
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| |||   ||| ||| || ||||| |||||||| |||||||| || || |||| ||||||||    
T  2927971 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttagtagcaaaaatgaggagtattagaaagattacctatgat 2927872  T
Q  241 tt 242  Q
    ||    
T  2927871 tt 2927870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 10332502 - 10332449
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  10332502 gtgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagt 10332449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 23760255 - 23760324
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||||    
T  23760255 cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataa 23760324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 13287707 - 13287811
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||   ||| ||| ||   || || ||||||||| ||||| || |||||||||||||    
T  13287707 ttgtgatgacaagtcatcttacgttattcttaacatgtttttcagtttattttagtaggaaataacatcaaaaaggatgagtattagaacgattgcctat 13287806  T
Q  238 gattt 242  Q
    |||||    
T  13287807 gattt 13287811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 33312563 - 33312524
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  33312563 ttaaccacaaaagaattagttactcatagctaaagtataa 33312524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 19154918 - 19154812
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||   |||||||| ||||| | ||||||||  ||||| || || |   |||||||||    
T  19154918 ttgtgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctat 19154819  T
Q  238 gattttc 244  Q
    |||||||    
T  19154818 gattttc 19154812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 20754317 - 20754211
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||   |||||||| ||||| | ||||||||  ||||| || || |   |||||||||    
T  20754317 ttgtgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctat 20754218  T
Q  238 gattttc 244  Q
    |||||||    
T  20754217 gattttc 20754211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 6966746 - 6966681
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  6966746 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 6966681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 17863741 - 17863806
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  17863741 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 17863806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 17867000 - 17867065
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  17867000 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 17867065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 19201319 - 19201392
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaa 211  Q
    |||||||||||  |||||||||||||||||| |||||||||| ||| ||||| | | || ||||||||||||||    
T  19201319 ttgtgatgacagatcatcttacgttattcttagcatgtttttcagtaatttttattaggctttagcagcaaaaa 19201392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 23897337 - 23897236
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||| ||||||||  ||||||||| ||||| ||| |||  |||||| ||||||||  |||||||| || | | ||||||||||||    
T  23897337 tgatgacatgtcatcttacattattcttaacatgtttttcagtcaattttagtatgttttaccagcaaaacagaggagtattatatcaattgcctatgat 23897238  T
Q  241 tt 242  Q
    ||    
T  23897237 tt 23897236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 24783004 - 24782939
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| | |||||||||||||||   |||||||||||||| ||||||||    
T  24783004 cataggattacatcagattcatcttaagcttaaccacaaaaagattagttactcataactaaagta 24782939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 3736424 - 3736365
Alignment:
Q  151 gtcatcttacgttattcttggcatg-tttttagtcattttcagtcggttttagcagcaaa 209  Q
    ||||||||||||||||||| ||||| |||||||||  ||||||| ||||||| |||||||    
T  3736424 gtcatcttacgttattcttagcatgttttttagtctatttcagtaggttttaccagcaaa 3736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 9918255 - 9918212
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  9918255 gtcatcttacgttattcttgacatgtttttgagtcattttcagt 9918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 9926167 - 9926124
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  9926167 gtcatcttacgttattcttgacatgtttttgagtcattttcagt 9926124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 10418644 - 10418553
Alignment:
Q  152 tcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||| ||||| ||||  ||||||||| ||||||||||||| |||||||  |||||||  |||||||| || | | ||||||||||||||    
T  10418644 tcatcttccgttactcttaacatgttttttagtcattttcagtaggttttactagcaaaacagaggagtattagagcaattgcctatgattt 10418553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 11279061 - 11279022
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  11279061 ttaaccacaaaagaattagttactcataggtaaagtataa 11279022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 21502948 - 21502850
Alignment:
Q  146 gacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||| |||||||||| |||||| ||||||||||||   |||||||| ||| |||||||  ||| |||  |||||||| || ||| ||||||||||||||    
T  21502948 gacatgtcatcttacattattcgtggcatgttttttcggtcatttttagtaggttttacgagctaaacagaggagtattagaacaattgcctatgattt 21502850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 9288997 - 9288947
Alignment:
Q  152 tcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  9288997 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggtttta 9288947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 9298789 - 9298739
Alignment:
Q  152 tcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  9298789 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggtttta 9298739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 2506817 - 2506858
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||||| ||||||||||||||||||  ||||||||||    
T  2506817 ttgtgatgacaggtcatcttacgttattctcagcatgttttt 2506858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 6039294 - 6039363
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagca 207  Q
    |||||||| || |||||||||| ||||||||  ||||||||| ||||||||||||| | ||||| |||||    
T  6039294 ttgtgatgtcatgtcatcttacattattcttaacatgtttttcagtcattttcagtagattttaccagca 6039363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 9722539 - 9722486
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    |||||||||| ||||||||||||||| || |||||||||| | |||||||||||    
T  9722539 gtgatgacaaatcatcttacgttattattagcatgtttttcaatcattttcagt 9722486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 13252704 - 13252745
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    |||||||| || ||||||||||||||||||| ||||||||||    
T  13252704 ttgtgatggcaggtcatcttacgttattcttagcatgttttt 13252745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 17189707 - 17189748
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  17189707 ttgtgatgacatgtcatcttacattattcttagcatgttttt 17189748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 1811001 - 1810953
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcatttt 189  Q
    |||||||| ||||||||||||||||| | |||||||||| |||||||||    
T  1811001 tgatgacatgtcatcttacgttattcgtagcatgtttttcagtcatttt 1810953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 7399424 - 7399356
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaa 210  Q
    |||||||| |||||||||||||||||||  |||||||| |||| |||| ||| || ||||  |||||||    
T  7399424 tgatgacatgtcatcttacgttattcttaacatgttttcagtcgtttttagtagggtttactagcaaaa 7399356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 20400431 - 20400330
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||    
T  20400431 tgatgacaggtcatcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaaggaggagtattagaacgatttcctatgat 20400332  T
Q  241 tt 242  Q
    ||    
T  20400331 tt 20400330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 29765388 - 29765494
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgccta 236  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  ||| ||||||||| |||||||||||||||||||| | ||| || ||||||||||||    
T  29765388 ttgtgatgacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttagcagcaaaaaggaagtgtattagaacgattgccta 29765487  T
Q  237 tgatttt 243  Q
    |||||||    
T  29765488 tgatttt 29765494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 13313271 - 13313372
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||| ||||||||||||||| |||||||||| ||||||||||| | |||||||||||||||||||||||||| || ||| ||||||||||||    
T  13313271 tgatgacatgtcgtcttacgttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaaggaggagtattagaacaattgcctatgat 13313370  T
Q  241 tt 242  Q
    ||    
T  13313371 tt 13313372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 17511004 - 17510900
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| | |||||||||| |||||||| |||||||||| ||||| ||||||| ||||||||| |||||||||||||||| || |||||||||||||    
T  17511004 ttgtgatgataggtcatcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattagaacgattgcctat 17510905  T
Q  238 gattt 242  Q
    |||||    
T  17510904 gattt 17510900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 15176441 - 15176533
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||||| |||||||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  15176441 gtcatcttacattattcttagcatgtgtttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgattt 15176533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 19705083 - 19704983
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| | |||||||| ||||||||||||| ||||||| ||||| |||| ||||||| || ||||||||||||||||    
T  19705083 tgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagcataaagaaggagtattagaacgattgcctatgat 19704984  T
Q  241 t 241  Q
    |    
T  19704983 t 19704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 24583173 - 24583272
Alignment:
Q  144 atgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||| ||||| ||| ||||||||| |||||||||| ||||||||| ||| | |||||||||||||||||||||||| || ||||||||||||||||||    
T  24583173 atgacaggtcattttatgttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaaggaggagtattagaacgattgcctatgattt 24583272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 29380960 - 29381062
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||| ||||||||||||||||||| ||||||||||  | ||| ||||| | |||||||| ||||||||||||||||| || |||||||||||||||    
T  29380960 tgatgacaggtcatcttacgttattcttagcatgtttttttattcaatttcaataggttttagtagcaaaaaggaggagtattagaacgattgcctatga 29381059  T
Q  240 ttt 242  Q
    |||    
T  29381060 ttt 29381062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 23867829 - 23867930
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||||| |||||| | |||||||| || |||||| ||| ||||||||||||||| | |||||||| || ||||||||||||||||    
T  23867829 tgatgacaggtcatcttacgtaattcttagtatgtttttcaggcatttttagtaggttttagcagcaaagacgaggagtattagaacgattgcctatgat 23867928  T
Q  241 tt 242  Q
    ||    
T  23867929 tt 23867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 24389853 - 24389751
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatg-tttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| | | | |||||||| ||||||||| |||||||||| |||||| |||||||| || ||| ||||||||| ||    
T  24389853 tgatgacaggtcatcttacgttattcttagtaagttttttagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgcctataat 24389754  T
Q  241 ttt 243  Q
    |||    
T  24389753 ttt 24389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 28621701 - 28621600
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||| ||||||||||| |||||||||| ||| ||||||| | ||||||||||  |||||| | ||||| || ||||||||||||||||    
T  28621701 tgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggttttagcataaaaaagaatgagtattagaacgattgcctatgat 28621602  T
Q  241 tt 242  Q
    ||    
T  28621601 tt 28621600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 18446856 - 18446960
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| | |||||||||||||||| ||  ||||||||| ||| |||| |||| || ||||||||||||||||||||||| || ||| ||| |||||    
T  18446856 ttgtgatgataggtcatcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaaggaggagtattagaaccatttcctat 18446955  T
Q  238 gattt 242  Q
    |||||    
T  18446956 gattt 18446960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 24090892 - 24090979
Alignment:
Q  156 cttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||||||||| |||||||||| ||| ||||| | | |||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  24090892 cttacgttattcttagcatgtttttcagttattttaattaggttttagcagcaaaaaggaagagtattagaacaattgcctatgattt 24090979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 19265919 - 19265818
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| |||   ||| ||| || |||| || ||||||||||||||| || ||| ||||||||||||    
T  19265919 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttaacaacaaaaaggaggagtattagaacaattgcctatgat 19265820  T
Q  241 tt 242  Q
    ||    
T  19265819 tt 19265818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 24380353 - 24380454
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||| ||| ||||||||||||||||||| |||||||||| | ||| ||||||| ||||||| ||||| ||  |||||||| || ||| ||||||||||||    
T  24380353 tgataacatgtcatcttacgttattcttagcatgtttttcactcaatttcagtaggttttaccagcagaacagaggagtattagaacaattgcctatgat 24380452  T
Q  241 tt 242  Q
    ||    
T  24380453 tt 24380454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 26829463 - 26829567
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    |||| |||||| ||||||||||||||||||| |||||||||| |||  |||| ||| ||   ||||| ||||| ||||||||| || |||||||||||||    
T  26829463 ttgtaatgacacgtcatcttacgttattcttagcatgtttttcagtattttttagtaggaaatagcaacaaaatggaggagtaatagaacgattgcctat 26829562  T
Q  238 gattt 242  Q
    |||||    
T  26829563 gattt 26829567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 13833600 - 13833655
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  13833600 ttgtgatgacaagtaatcttacgttattctttgcatgtttttcagtcattttcagt 13833655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 24520002 - 24520104
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||| ||| || ||||||||||| |||||||||| ||| ||||||||| || ||||| |||||||||||  |||| || ||| ||||||||| ||    
T  24520002 tgatgacaaatcaactcacgttattcttagcatgtttttcagttattttcagtaggatttagtagcaaaaaggataagtattagaacaattgcctataat 24520101  T
Q  241 ttt 243  Q
    |||    
T  24520102 ttt 24520104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 21695411 - 21695472
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttt 200  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||| ||||||    
T  21695411 tgtgatgacatgtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggtttt 21695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 17100203 - 17100307
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||| | ||||||||| |||||||||| | | |||||||   ||||||||||||||||||||| |||| |  || ||||||| ||    
T  17100203 ttgtgatgacaggtcatctcaagttattcttagcatgtttttcaattattttcataaggttttagcagcaaaaaggagaagtatttgaatgattgccaat 17100302  T
Q  238 gattt 242  Q
    |||||    
T  17100303 gattt 17100307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 5152016 - 5151957
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttt 200  Q
    ||||||||||||||||||||||||||||  ||||||||| ||| ||||||||| ||||||    
T  5152016 tgatgacaagtcatcttacgttattcttaacatgtttttcagtaattttcagttggtttt 5151957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 24518588 - 24518647
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggtttta 201  Q
    |||||||| ||||||| ||||||||||| | ||||||||||| ||||||||| |||||||    
T  24518588 tgatgacatgtcatctaacgttattcttagtatgtttttagttattttcagtaggtttta 24518647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 26139885 - 26139784
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||| | ||||||||||||||||||| ||||||||||  | | ||||| ||| ||   ||||| ||||||||||||||| || |||||||||||||||    
T  26139885 tgatgaaaggtcatcttacgttattcttagcatgtttttcaatttatttt-agtaggaaatagcatcaaaaaggaggagtattagaacgattgcctatga 26139787  T
Q  240 ttt 242  Q
    |||    
T  26139786 ttt 26139784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 6886767 - 6886729
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  6886767 tgatgacaagtcatcttacgttattcttagcatgttttt 6886729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 26888583 - 26888481
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  |||| |||||||||| || |||| ||||| | | ||||| ||| |||||||||| ||||||||||||||| |  |||||||| |||||||    
T  26888583 tgatgacagatcattttacgttatttttagcatatttttcatttatttttagtaggttttagcaacaaaaaggaggagtattggaacgattgtctatgat 26888484  T
Q  241 ttt 243  Q
    |||    
T  26888483 ttt 26888481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 21316883 - 21316842
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  21316883 ttgtgatgacaggtcatcttacgttattcttagcatgttttt 21316842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24381324 - 24381424
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||| ||||||||| ||||||||| ||||||||||  ||||| ||||||  ||||||| ||||| ||  |||||||| |  ||| ||||||||||    
T  24381324 gtgatgacaggtcatcttaagttattcttagcatgttttttcagtcaatttcagcaggttttaccagcagaacagaggagtattttaacaattgcctatg 24381423  T
Q  239 a 239  Q
    |    
T  24381424 a 24381424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 25481505 - 25481606
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| ||||| |||  | | | ||| ||| ||   ||||||||||| ||||||||| || ||||||||||||||||    
T  25481505 tgatgacaggtcatcttacgttattcttagcatgctttacaattaattttagtaggaaatagcagcaaaatggaggagtattagaacgattgcctatgat 25481604  T
Q  241 tt 242  Q
    ||    
T  25481605 tt 25481606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 17650058 - 17650006
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagt 193  Q
    ||||||||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  17650058 tgatgacaagtcatcttacgttattcttaacatgtttttcagtcgttttcagt 17650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 24381995 - 24382047
Alignment:
Q  151 gtcatcttacgttattcttggcatgt-ttttagtcattttcagtcggttttag 202  Q
    |||||||| |||||||||| |||||| ||||||||||||||||| ||||||||    
T  24381995 gtcatctttcgttattcttagcatgtattttagtcattttcagtaggttttag 24382047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 14271939 - 14271900
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  14271939 gtgatgacaggtcatcttacgttattcttagcatgttttt 14271900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 22501930 - 22501851
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||  ||||||||||||||||||  ||||||||| | || |||||||| ||||||| ||||||||  ||||||||    
T  22501930 tgatgacatatcatcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaacagaggagta 22501851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 28275324 - 28275362
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  28275324 tgatgacaaatcatcttacgttattcttagcatgttttt 28275362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 30117661 - 30117727
Alignment:
Q  145 tgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    ||||| || ||||||||||||| || |||||||||| | ||||||||||| ||||||| ||||||||    
T  30117661 tgacaggttatcttacgttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaa 30117727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 18007620 - 18007535
Alignment:
Q  154 atcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||||||| || |||| |||| ||||||||||||| ||||||| || ||||| || ||| || || ||| |||| ||||||    
T  18007620 atcttacgttattgttagcattttttcagtcattttcagtaggttttaccaacaaaatggtggaatattagaacaattgtctatga 18007535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 24750925 - 24750864
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggtttt 200  Q
    ||||||||||| || ||||||| |||||||| ||||||||||  ||||||| ||||| ||||    
T  24750925 ttgtgatgacatgttatcttacattattcttagcatgtttttcttcatttttagtcgttttt 24750864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 43063059 - 43063019
Alignment:
Q  71 agccaatacacataatgttggtatttgggttaagtggtgga 111  Q
    |||||||||||||||||| | ||||| ||||||||||||||    
T  43063059 agccaatacacataatgtggatattttggttaagtggtgga 43063019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 15542308 - 15542409
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||||    
T  15542308 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaaagtaggagtattagaacgattgcctatgat 15542407  T
Q  241 tt 242  Q
    ||    
T  15542408 tt 15542409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 729233 - 729132
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||| | ||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||    
T  729233 tgatgaaaggtcatcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgtctatgat 729134  T
Q  241 tt 242  Q
    ||    
T  729133 tt 729132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 21663090 - 21663191
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||| || |||||||||| |||| || ||||||||||||||||    
T  21663090 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaaggagaagtattagaacgattgcctatgat 21663189  T
Q  241 tt 242  Q
    ||    
T  21663190 tt 21663191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 18527496 - 18527597
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||||||||||||||||||||||| |||| ||||| | ||||||||| | ||||||||| |||||||||||||||| || || |||||||||||||    
T  18527496 tgatgacaagtcatcttacgttattcttagcatctttttcactcattttcaataggttttagcggcaaaaaggaggagtattagaatgattgcctatgat 18527595  T
Q  241 tt 242  Q
    ||    
T  18527596 tt 18527597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 22507381 - 22507482
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||| || |||||||||||||||| ||||||||||  ||| ||||||| | ||||||||| |||||||||||||||| || |||||||||||||||    
T  22507381 tgatgacatgtgatcttacgttattcttagcatgtttttttagttattttcattaggttttagcggcaaaaaggaggagtattagaacgattgcctatga 22507480  T
Q  240 tt 241  Q
    ||    
T  22507481 tt 22507482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 12210363 - 12210260
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||| | |||||||||| |||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||||| || || ||||| |||| |    
T  12210363 gtgatgataggtcatcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaaagattgtctataa 12210264  T
Q  240 tttt 243  Q
    ||||    
T  12210263 tttt 12210260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 27973400 - 27973321
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||| ||| |||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  27973400 tgatgaccagttatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacagcaaaaaggaggagta 27973321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 21450865 - 21450763
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||| ||||||||| |||||  || |||||||| | ||||||||||||| |||||||||||||||||||||||||| |  || ||||||||||||    
T  21450865 gtgatgacaggtcatcttaagttatctttagcatgtttctcagtcattttcagtaggttttagcagcaaaaaggaggagtattggaaagattgcctatga 21450766  T
Q  240 ttt 242  Q
    |||    
T  21450765 ttt 21450763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 22624713 - 22624612
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttta-gtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||   ||| ||| || ||||||||||||||||||||||| || || |||||||||||||    
T  22624713 tgatgacatgtcatcttacattattcttagcatgtttttaagtttattttagtaggatttagcagcaaaaaggaggagtattaaaatgattgcctatgat 22624614  T
Q  241 tt 242  Q
    ||    
T  22624613 tt 22624612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 32506500 - 32506565
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||    
T  32506500 cataggattacatcagattcatctcaagcttaatcacaaaagaattagttactcatagctaaagta 32506565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 14782627 - 14782551
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggagga 217  Q
    |||||||| ||||||||||||||||||| |||||||||| | ||| ||||| | |||||||||||||||||||||||    
T  14782627 tgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggttttagcagcaaaaaggagga 14782551  T

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Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 18734583 - 18734687
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    |||||||||| || |||||||||||||||| |||||||||| |||    || ||| || |||| |||||||||||||||||| || ||||||||||||||    
T  18734583 tgtgatgacaggttatcttacgttattcttagcatgtttttcagtttactttagtaggatttaacagcaaaaaggaggagtattagaacgattgcctatg 18734682  T
Q  239 atttt 243  Q
    |||||    
T  18734683 atttt 18734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 18832312 - 18832211
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||| ||| ||||| |||||||||| ||| | ||| | | ||| |||||||||||||||||||||| || ||||||| ||||||||    
T  18832312 tgatgacaggtcatcttaggttcttcttagcatgtttttcagttactttaattaggtcttagcagcaaaaaggaggagtattagaacgattacctatgat 18832213  T
Q  241 tt 242  Q
    ||    
T  18832212 tt 18832211  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 22426515 - 22426616
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||||| |||||| |||||||||| |||   ||| ||| ||   ||||||||||||||||||||| || ||||||||||||||||    
T  22426515 tgatgacaggtcatcttacgtcattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatgat 22426614  T
Q  241 tt 242  Q
    ||    
T  22426615 tt 22426616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 26611331 - 26611432
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| | | | | | ||| || ||||||||||||||||||||||| |  || |||||||||||||    
T  26611331 tgatgacaggtcatcttacgttattcttagcatgtttttcaattaatattagtaggatttagcagcaaaaaggaggagtattggaatgattgcctatgat 26611430  T
Q  241 tt 242  Q
    ||    
T  26611431 tt 26611432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 26647355 - 26647436
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    |||||||||| ||||||||||||||||||| |||| ||||| |||| |||||||| ||||||| || ||||| |||||||||    
T  26647355 tgtgatgacaggtcatcttacgttattcttagcatatttttcagtctttttcagtaggttttaccaacaaaacggaggagta 26647436  T

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Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 27282754 - 27282819
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||||||||||||||| ||| | ||||||||||||  |||||||||||||||||||||||    
T  27282754 cataggattatatcagattcatctcaggattaaccacaaagagattagttactcatagctaaagta 27282819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 15158787 - 15158867
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||| ||||  ||||||||||||| |||||||||| ||| ||||| ||| || |||||||||||||||||||||||    
T  15158787 gtgatgacaggtcaaattacgttattcttagcatgtttttcagttattttaagtaggatttagcagcaaaaaggaggagta 15158867  T

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Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 25402432 - 25402536
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| |||||||| |||||||||| |||||||||| |||   ||| ||| || |||||||||||||| |||||||| || ||||||||  |||    
T  25402432 ttgtgatgacaggtcatcttgcgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaagaggagtattagaacgattgtttat 25402531  T
Q  238 gattt 242  Q
    |||||    
T  25402532 gattt 25402536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 33192449 - 33192381
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaa 209  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||| ||||||| ||||||| |||||||    
T  33192449 tgatgacaagtcatcttacgctattcttagcatgtttttcagtcaatttcagtaggttttaccagcaaa 33192381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 16817103 - 16817209
Alignment:
Q  137 gtttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcct 235  Q
    |||| ||||||||||||||||||||||||||||  ||||||||| |||   ||| ||| ||   ||||||||||||||||||||  || ||| |||||||    
T  16817103 gtttctgatgacaagtcatcttacgttattcttaacatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtgttagaactattgcct 16817202  T
Q  236 atgattt 242  Q
    |||||||    
T  16817203 atgattt 16817209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 28009839 - 28009766
Alignment:
Q  146 gacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggag 218  Q
    |||| |||||||||| |||||||| |||||||||| ||||||||||  |  |||||||||||||||||||||||    
T  28009839 gacatgtcatcttacattattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaaggaggag 28009766  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 9403686 - 9403630
Alignment:
Q  186 ttttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||| |||||||||||||||||| ||||||| || |||| |||||||||||||    
T  9403686 ttttcagtaggttttagcagcaaaaagaaggagtattagaacgtttgcctatgattt 9403630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 18827496 - 18827392
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||  |||||||||||||||||||  ||||||||| ||| ||||| | | ||| ||||||| | |||||| ||||| || || ||||||||||    
T  18827496 ttgtgatgactggtcatcttacgttattcttaacatgtttttcagttattttaattaggtcttagcaggagaaaggatgagtattagaatgattgcctat 18827397  T
Q  238 gattt 242  Q
    |||||    
T  18827396 gattt 18827392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 17365868 - 17365809
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcat-gtttttagtcattttcagtcggtttt 200  Q
    |||||||||||||||| ||||||||||||| ||  |||||||||||||||||| ||||||    
T  17365868 tgatgacaagtcatctcacgttattcttggaatattttttagtcattttcagtaggtttt 17365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 16180799 - 16180714
Alignment:
Q  157 ttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||| |||||||| |||||||||| ||| ||||||||| |  ||||||| ||||||||||||||| || ||| ||||||||||||||    
T  16180799 ttacattattcttagcatgtttttcagttattttcagtagagtttagcaacaaaaaggaggagtattagaac-attgcctatgattt 16180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 10759720 - 10759655
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  10759720 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 10759655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 21333071 - 21333172
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||| |||||||||   |||||||  | | | ||||| | ||||||||||| ||||||||| |||| || ||||||||||||||||    
T  21333071 tgatgacatgtcatcttatgttattcttaatatgttttgcacttagtttcaataggttttagcaggaaaaaggagaagtattaaaacgattgcctatgat 21333170  T
Q  241 tt 242  Q
    ||    
T  21333171 tt 21333172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 16915194 - 16915298
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttc-agtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||| |||||||||||||||||||  ||||||||| |||  ||||  ||| ||   || || ||||||||||||||| || ||||||||||||||    
T  16915194 gtgatgacacgtcatcttacgttattcttaacatgttttttagtatttttttagtagggaataacaacaaaaaggaggagtattagaacgattgcctatg 16915293  T
Q  239 atttt 243  Q
    |||||    
T  16915294 atttt 16915298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 16363710 - 16363619
Alignment:
Q  152 tcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||| || |||||||||  ||||||||||||| | ||||| || |||||  |||||||| || | | ||||||||||||||    
T  16363710 tcatcttacgttatttttagcatgttttccagtcattttcagtagtttttaccaacaaaatagaggagtattagatcaattgcctatgattt 16363619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 24464711 - 24464664
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattt 188  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  24464711 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattt 24464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 27912163 - 27912113
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcatttt 189  Q
    |||||||||| |||||||||||||||||||  ||||||||| |||||||||    
T  27912163 tgtgatgacatgtcatcttacgttattcttaacatgtttttcagtcatttt 27912113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 31431442 - 31431520
Alignment:
Q  20 gtattggacaaccatctttcaaaaatacatgaacaaaatgattggcagttcagccaatacacataatgttggtatttgg 98  Q
    |||||| ||||||||||||||||||| | |||||||| || ||||   || |||||| | || ||||||||||||||||    
T  31431442 gtattgaacaaccatctttcaaaaatccttgaacaaagtggttggggattaagccaagagacgtaatgttggtatttgg 31431520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 13495586 - 13495521
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| |||| ||| || ||||| ||||||||||||  |||||||||||||| ||||||||    
T  13495586 cataggattacatcatatttatctcaagtttaaccacaaagagattagttactcataactaaagta 13495521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 15630979 - 15631024
Alignment:
Q  197 ttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||  ||||||||||||||| || ||||||||||||||||||    
T  15630979 ttttagctacaaaaaggaggagtattagaacgattgcctatgattt 15631024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 24901306 - 24901237
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    |||| |||||||||||||||||||| || |||| ||||| | ||||||||||| | ||||| ||||||||    
T  24901306 tgattacaagtcatcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaa 24901237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 25959459 - 25959528
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttt-ttagtcattttcagtcggttttagcagcaaaa 210  Q
    ||||||||||||||||||| |||||||| | |||||| | |||| |||||||| ||||||| | ||||||    
T  25959459 tgatgacaagtcatcttacattattcttaggatgtttctcagtctttttcagtaggttttaccggcaaaa 25959528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 14641730 - 14641627
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    ||||||||| || |||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||| || ||| ||| |||||||    
T  14641730 gtgatgacaggttatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattacctatga 14641631  T
Q  240 tttt 243  Q
    ||||    
T  14641630 tttt 14641627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 17384123 - 17384019
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    |||||||||||  ||||||||| |||||||| |||||||||| ||| ||||||| | |||||||||||||||||||||||||| ||||| |||||||||     
T  17384123 ttgtgatgacagatcatcttacattattcttagcatgtttttcagttattttcattaggttttagcagcaaaaaggaggagtattacaatgattgcctaa 17384024  T
Q  238 gattt 242  Q
    |||||    
T  17384023 gattt 17384019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 17822027 - 17822126
Alignment:
Q  146 gacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    |||| ||||||||||||||||||| ||||||||||  ||| ||||||| | || ||||||||||||||||||||||| || |||||||||||||||||||    
T  17822027 gacatgtcatcttacgttattcttagcatgtttttctagttattttcaataggatttagcagcaaaaaggaggagtattagaacgattgcctatgatttt 17822126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 19593974 - 19594078
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||||||| ||||| |||| |||| ||||||||||  ||| ||||||||| ||||||||| |||||||||||||||| || ||| ||||||||||    
T  19593974 gtgatgacaagtcgtcttatgttaatcttagcatgtttttttagttattttcagtaggttttagctgcaaaaaggaggagtattagaacaattgcctatg 19594073  T
Q  239 atttt 243  Q
    |||||    
T  19594074 atttt 19594078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 22404254 - 22404355
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||| ||||||||||  ||||||||| ||| | ||||||| |||||||||||||||||||||||||| || |||||||| |||||||    
T  22404254 tgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaaggaggagtattaaaacgattgtctatgat 22404353  T
Q  241 tt 242  Q
    ||    
T  22404354 tt 22404355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 9519831 - 9519727
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||||| ||||||||||||||| || |||||||||| ||| ||||||||| |  ||||||||||||||||||||||| || | | ||||||||||    
T  9519831 tgtgatgacaattcatcttacgttatttttagcatgttttttagttattttcagtagtatttagcagcaaaaaggaggagtattagagcaattgcctatg 9519732  T
Q  239 atttt 243  Q
    |||||    
T  9519731 atttt 9519727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 24469894 - 24469794
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatt 241  Q
    ||||||| |||||||||||||||| || | |||||||| | ||||||||||| ||||||  |||||||||||||||||| || |||||||||||||||||    
T  24469894 gatgacaggtcatcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaaggaggagtattagaacgattgcctatgatt 24469795  T
Q  242 t 242  Q
    |    
T  24469794 t 24469794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 19577572 - 19577639
Alignment:
Q  176 tttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||    
T  19577572 tttttagttattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatttt 19577639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 24480121 - 24480020
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||| | ||||||||||||||||||| |||||| ||| | ||||||||||| |||||| ||||||||||||||||||| |  |||||||| |||||||    
T  24480121 tgatgataggtcatcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaaaggaggagtattggaacgattgtctatgat 24480022  T
Q  241 tt 242  Q
    ||    
T  24480021 tt 24480020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 32426968 - 32426902
Alignment:
Q  243 tcatagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    |||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  32426968 tcataggattatatcatattcatctcaagcttaaccacaaaagaattagttactcctagctaaagta 32426902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 9841114 - 9841037
Alignment:
Q  144 atgacaagtcatcttacgttattcttggcatgt-ttttagtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||| ||||||||||||||||||  ||||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  9841114 atgacaaatcatcttacgttattcttaacatgtgttttagtcattttcagtaggttttaccagcagaaaggaggagta 9841037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 1636731 - 1636629
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||||  |||||||||||||||||| |||||||||| ||| ||||| ||| ||||||||| |||||||||| ||||| || ||| ||||||||| |    
T  1636731 gtgatgacagatcatcttacgttattcttagcatgtttttcagttatttttagtaggttttagcggcaaaaagga-gagtattagaacaattgcctataa 1636633  T
Q  240 tttt 243  Q
    ||||    
T  1636632 tttt 1636629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 14078135 - 14078033
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatg-tttttagtcatttt-cagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||| |||||||||| |||||||| ||||| |||||||| ||||| |||| || |||||||||||| |||||||||| || | | |||||||||||    
T  14078135 tgatgacaggtcatcttacattattcttagcatggtttttagttatttttcagtaggatttagcagcaaagaggaggagtattagagcaattgcctatga 14078036  T
Q  240 ttt 242  Q
    |||    
T  14078035 ttt 14078033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 14076493 - 14076392
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcat-gtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||| |||||||||  | |||||||||||| |||||||||| || |   ||||||||||||    
T  14076493 tgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaagaggaggagtattagagaaattgcctatgat 14076394  T
Q  241 tt 242  Q
    ||    
T  14076393 tt 14076392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 22564558 - 22564650
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||| ||||||| ||||||||  |||||||| || | | ||||||| ||||||    
T  22564558 gtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcaattgcctgtgattt 22564650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 22845862 - 22845953
Alignment:
Q  153 catcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    |||||||||||| |||| |||||||||| ||| |||||||||  |||||| || ||||||||||||||| || ||| ||||||||| |||||    
T  22845862 catcttacgttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaaggaggagtattagaacaattgcctataatttt 22845953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 17847877 - 17847775
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  || ||||| ||||||||| |||||||||| ||| ||||| |||  |||||||||||||||| || ||||| || |||||||| |||||||    
T  17847877 tgatgacagatcctcttatgttattcttagcatgttttttagttattttaagtaagttttagcagcaaaaatgaagagtattagaacgattgtctatgat 17847778  T
Q  241 ttt 243  Q
    |||    
T  17847777 ttt 17847775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 21687129 - 21687198
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||| ||| ||| ||||||| ||||||||    
T  21687129 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaa 21687198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 21760407 - 21760508
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||| |||| ||||||||| |||| ||||| ||||||||||| | |  |||||||||||||||||||| || || || |||| ||||||||    
T  21760407 tgatgacaggtcaccttaagttattcttagcatatttttcagtcattttcaatagaatttagcagcaaaaaggaggattattagaatgatttcctatgat 21760506  T
Q  241 tt 242  Q
    ||    
T  21760507 tt 21760508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 14723771 - 14723683
Alignment:
Q  152 tcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||||||||||||| ||||| |||| ||| ||||||| | || ||||| ||||||||||||||||| || || ||||| ||||||    
T  14723771 tcatcttacgttattcttagcatgcttttcagttattttcaataggatttaggagcaaaaaggaggagtattagaatgattgtctatga 14723683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 4340761 - 4340682
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||  ||||||||||||||| || | |||||||| ||  ||||||||| ||||||||||| ||||||||||||||    
T  4340761 tgatgacagatcatcttacgttatttttagtatgtttttcagatattttcagtaggttttagcagtaaaaaggaggagta 4340682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 9848260 - 9848158
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||| | |||||||||||  ||||||||| ||||||||| ||| |||||||  ||||||||||| ||||| || | | ||| ||||||||    
T  9848260 tgatgacatgtcatttgacgttattcttaacatgtttttcagtcatttttagtaggttttattagcaaaaaggatgagtattagagcaatttcctatgat 9848161  T
Q  241 ttt 243  Q
    |||    
T  9848160 ttt 9848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 21845737 - 21845830
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||||||||||||||  |||||||||  |||||||||||   | |||||| || ||| ||||||| || || ||||||||||||||||||    
T  21845737 gtcatcttacgttattcttaacatgttttttcagtcattttcaaaagtttttagaagaaaagaggaggattattataacgattgcctatgattt 21845830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 13017836 - 13017905
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| |  ||||||||||| ||||||||||||||||||||| ||||||    
T  13017836 cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaacgtataa 13017905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 14790217 - 14790152
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  14790217 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 14790152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 15534687 - 15534622
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| |||| || ||||||||||  |||||||||||||| ||||||||    
T  15534687 cataggattacatcagattcatctcaatctcaaccacaaagagattagttactcatatctaaagta 15534622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 22221323 - 22221254
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| |  ||||||||||| |||||||||||||||||| |||||||||    
T  22221323 cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagcgaaagtataa 22221254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 22247158 - 22247089
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| |  ||||||||||| |||||||||||||||||| |||||||||    
T  22247158 cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagcgaaagtataa 22247089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 32704900 - 32704965
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||  |||||||||||||| ||| ||||    
T  32704900 cataggattacatcagattcatctcaagcttaaccataaagagattagttactcataactacagta 32704965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 21152510 - 21152592
Alignment:
Q  161 gttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||| || |||||||||| | | ||||| ||| || || |||||||||||||||||||| || |||||||| |||||||||    
T  21152510 gttatttttagcatgtttttcaattatttttagtaggattaagcagcaaaaaggaggagtattagaacgattgtctatgattt 21152592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 1838072 - 1838007
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| |||  || ||||||||||  |||||||||||||| ||||||||    
T  1838072 cataggattacatcagattcatctcagtctcaaccacaaagagattagttactcatatctaaagta 1838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 7543157 - 7543116
Alignment:
Q  140 tgtgatgacaagtcatcttacgtta-ttcttggcatgttttt 180  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  7543157 tgtgatgacaagtcatcttacgttatttcttagcatgttttt 7543116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 14727232 - 14727171
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    ||||||||| |||||||||||||||| ||  ||||||||| ||||||||| ||| |||||||    
T  14727232 gtgatgacaggtcatcttacgttattattaccatgtttttcagtcatttttagtaggtttta 14727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 14795245 - 14795180
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| |||||||||||||  |||  |||||||||||||| ||| ||||    
T  14795245 cataggattacatcagattcatctcaagcttaaccatgaagagattagttactcataactacagta 14795180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 17379461 - 17379498
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  17379461 gatgacaattcatcttacgttattcttagcatgttttt 17379498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 2588388 - 2588292
Alignment:
Q  147 acaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||||| || || |||| ||||| ||||||||||| | ||||||| || || ||| || ||||| || ||| |||| |||||||||    
T  2588388 acaagtcatcttacgttgtttttagcatatttttcagtcattttcaattggttttaccaacataaaagatgagtattagaacaattgtctatgattt 2588292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 9897868 - 9897920
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatg-tttttagtcattttcagt 193  Q
    |||||||| ||||||||||||  ||||| ||||| ||||||||||||||||||    
T  9897868 tgatgacatgtcatcttacgtcgttcttagcatgatttttagtcattttcagt 9897920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 23644318 - 23644418
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatt 241  Q
    ||||||| || |||||||||||||||| |||||||||| | |  |||| ||| ||||||| ||||||||   ||||||| || | | |||||||||||||    
T  23644318 gatgacaggttatcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaacataggagtattagatcaattgcctatgatt 23644417  T
Q  242 t 242  Q
    |    
T  23644418 t 23644418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 26820960 - 26820896
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttag 202  Q
    |||| |||||| |||||||||||||| |||| |||||||||| ||| ||||||| | ||||||||    
T  26820960 ttgtaatgacaggtcatcttacgttactcttagcatgtttttcagttattttcattaggttttag 26820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 28918288 - 28918186
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    |||||||||||| |||| ||||||||||||| |||||||||| ||||||||||||| |||||||||  ||||||||||||||| || ||| |||||||||    
T  28918288 ttgtgatgacaaatcattttacgttattcttagcatgtttttcagtcattttcagtaggttttagctacaaaaaggaggagtattagaacaattgcctat 28918189  T
Q  238 gat 240  Q
    |||    
T  28918188 gat 28918186  T

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Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 17351077 - 17350974
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    ||||||||||||||||||||||||||||||  ||| ||||| ||| ||||||||| |||||||||| |||||| |||||||| || ||| |||| |||||    
T  17351077 tgtgatgacaagtcatcttacgttattcttaacatatttttcagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgtctatg 17350978  T
Q  239 attt 242  Q
    ||||    
T  17350977 attt 17350974  T

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Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 26313275 - 26313173
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||||||||||||| |||||||| |||||||||| | ||| ||||||| |||||||||||||||||| | ||||| || |||||| |||||| ||    
T  26313275 tgatgacaagtcatcttacattattcttagcatgttttttaatcaatttcagtaggttttagcagcaaaaagaatgagtattagaacgatcgcctataat 26313176  T
Q  241 ttt 243  Q
    |||    
T  26313175 ttt 26313173  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 18758386 - 18758297
Alignment:
Q  154 atcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||| || |||||||||| | | ||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||    
T  18758386 atcttacgttatttttagcatgttttttaattattttcagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatgattt 18758297  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 27907519 - 27907623
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||| | |||| ||||| |||||||| |||||||||| |||||||||||||  ||||||||| |||||||||| |||| || ||| |||||||||    
T  27907519 ttgtgatgataggtcaccttacattattcttagcatgtttttcagtcattttcagtaagttttagcaacaaaaaggagaagtattaaaactattgcctat 27907618  T
Q  238 gattt 242  Q
    |||||    
T  27907619 gattt 27907623  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 21905823 - 21905721
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||| ||||||||| |||||||||| |||||||||| ||  |||||||||| |||||||||||||| || || ||| || ||||||    
T  21905823 tgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaaggaggagtattagaatgatagcttatgat 21905724  T
Q  241 ttt 243  Q
    |||    
T  21905723 ttt 21905721  T

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Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 24086310 - 24086407
Alignment:
Q  146 gacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||| |||| |||||||||||||| |||||||||| |||   ||| ||| || ||||||||||||||||||||||| || ||||||||||||||||||    
T  24086310 gacaggtcaacttacgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaggaggagtattagaacgattgcctatgattt 24086407  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 35680100 - 35680201
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| | ||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||  |||||||| || | | |||| |||||||    
T  35680100 tgatgacaggccatcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtattagagcaattgtctatgat 35680199  T
Q  241 tt 242  Q
    ||    
T  35680200 tt 35680201  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 36326523 - 36326458
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  36326523 cataggattacatcagattcatctcaagcttaaccacaaaagaattagttactcatagataaagta 36326458  T

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Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 17891829 - 17891749
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||| ||||||||  ||||||||    
T  17891829 gtgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaacagaggagta 17891749  T

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Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 25532336 - 25532232
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    |||||||| |||||||| ||||||||||||| |||||||||| |||   ||| ||| ||   ||||||||||||||||||||| || |||||||||||||    
T  25532336 ttgtgatggcaagtcattttacgttattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctat 25532237  T
Q  238 gattt 242  Q
    |||||    
T  25532236 gattt 25532232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 25886188 - 25886292
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| |||||||||||||||| ||  |||||||||  |||||||||| | ||||||||||  |||||||| ||||| || |||||||| ||||    
T  25886188 ttgtgatgacaggtcatcttacgttatttttatcatgtttttctgtcattttcattaggttttagcataaaaaaggaagagtattagaacgattgtctat 25886287  T
Q  238 gattt 242  Q
    |||||    
T  25886288 gattt 25886292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 34574611 - 34574508
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||| ||| ||||||||||||||||||| ||||||||||  ||| ||||||||| |||||||  || ||| |||||||||| || ||||| |||||||||    
T  34574611 tgattacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttaatagaaaataggaggagtattagaacgaatgcctatga 34574512  T
Q  240 tttt 243  Q
    ||||    
T  34574511 tttt 34574508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 40017576 - 40017508
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| |||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  40017576 cataggattacatcatattcatctcaagcttaaccacaaaagaattagttactcatagttaaagtataa 40017508  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 23010043 - 23010122
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||| |||||||| | |||||||    
T  23010043 tgataacaagtcatcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacgaaggagta 23010122  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 29144732 - 29144629
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatg-tttttagtcattttcagtcggttttagc-agcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||  || | ||||||||| |||||||||||||| || || || |||| |||||||    
T  29144732 tgatgacaggtcatcttacgttattcttagcatgttttttagtcattaccaataggttttagcaagcaaaaaggaggaatattagaatgatttcctatga 29144633  T
Q  240 tttt 243  Q
    ||||    
T  29144632 tttt 29144629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 22569142 - 22569049
Alignment:
Q  151 gtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||||||| |||||||||  ||||||||| ||||| ||||||| ||||||||||| ||||| ||| |||| || ||||||| |||||||||||    
T  22569142 gtcatcttatgttattcttaccatgtttttcagtcaatttcagtaggttttagcagaaaaaatgagaagtattagaacgattacctatgatttt 22569049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 18120546 - 18120646
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatt 241  Q
    ||||||| ||||||||||||||||||| |||||||||| |||   ||| ||| ||   ||||||||||| ||||||||| || |||||||||||||||||    
T  18120546 gatgacatgtcatcttacgttattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaatggaggagtattagaacgattgcctatgatt 18120645  T
Q  242 t 242  Q
    |    
T  18120646 t 18120646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 25196710 - 25196607
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatg 238  Q
    |||||||||| ||||||||| |||||||||  ||||||||| |||   ||| ||| || |||||||||||||| ||| |||| || ||||||||||||||    
T  25196710 tgtgatgacatgtcatcttatgttattcttaacatgtttttcagtttattttagtaggatttagcagcaaaaaagagaagtattaaaacgattgcctatg 25196611  T
Q  239 attt 242  Q
    ||||    
T  25196610 attt 25196607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 31626140 - 31626077
Alignment:
Q  250 attatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    |||| ||||||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||    
T  31626140 attacatcagattcatctcaagaattaaccacaaaagaattagttactcatagctaaagtataa 31626077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 28930371 - 28930270
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||| || ||||||||||||  || ||||||||||  |||||||||||||  |||||||| ||||||| ||||| || || ||| ||||||||||||    
T  28930371 gatgacaggtaatcttacgttatgtttagcatgttttttcagtcattttcagtatgttttagctgcaaaaatgaggaatattagaacaattgcctatgat 28930272  T
Q  241 tt 242  Q
    ||    
T  28930271 tt 28930270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 31527988 - 31527919
Alignment:
Q  244 catagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||||    
T  31527988 cataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataa 31527919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 13709670 - 13709602
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||| |||| ||||||||||| |||   ||||||||||  ||||||||||||||||||||||||||||    
T  13709670 cataggattacatcagattcatctcagaattaaccacaagagaattagttactcatagctaaagtataa 13709602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 27540270 - 27540366
Alignment:
Q  147 acaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||| |||||||| |||| |||| ||||| ||||||||||||| ||||||||||  ||||| ||||| || || |||||||  |||||||||    
T  27540270 acaagtcatattacgttactcttagcatatttttcagtcattttcagtaggttttagcataaaaaatgaggaatattagaacgattttctatgattt 27540366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 16157084 - 16157143
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttt 200  Q
    |||||||| |||||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  16157084 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggtttt 16157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 25537653 - 25537552
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||||||||||||| |||||||||| |||   ||| ||| ||   || ||| |||||||||||||| || | ||||||||||||||    
T  25537653 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggaaataacagtaaaaaggaggagtattagagcgattgcctatgat 25537554  T
Q  241 tt 242  Q
    ||    
T  25537553 tt 25537552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 18970774 - 18970833
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggtttta 201  Q
    ||||||||| ||||||||||||||||||| |||| |||| || |||||||||| |||||||    
T  18970774 gtgatgacatgtcatcttacgttattctttgcat-ttttcaggcattttcagtaggtttta 18970833  T

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Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 4921 - 4820
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||| | ||| ||||| ||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  4921 tgatgataggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgat 4822  T
Q  241 tt 242  Q
    ||    
T  4821 tt 4820  T

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Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 19003765 - 19003866
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| || ||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||| || ||| |||| |||||||    
T  19003765 tgatgacatgtgatcttacgttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtctatgat 19003864  T
Q  241 tt 242  Q
    ||    
T  19003865 tt 19003866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 23387547 - 23387648
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||| | ||| ||||| ||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  23387547 tgatgataggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgat 23387646  T
Q  241 tt 242  Q
    ||    
T  23387647 tt 23387648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 20860439 - 20860334
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| |||||||||||||| | || |||||||||| | | ||||||||| ||||||||||||||||||||| |||| || ||| |||||||||    
T  20860439 ttgtgatgacaggtcatcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaaggagaagtattagaacaattgcctat 20860340  T
Q  238 gatttt 243  Q
    ||||||    
T  20860339 gatttt 20860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 24320522 - 24320623
Alignment:
Q  143 gatgacaagtcatcttacgttattcttggcatgttttt--agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||| |||||||||||||||||||  |||||||||  | ||||||||||| ||||||||||||||||||| |||||| ||  |||||| |||| |||    
T  24320522 gatgacaggtcatcttacgttattcttaacatgtttttttattcattttcagtaggttttagcagcaaaaaggcggagtattagcacgatttcctacgat 24320621  T
Q  241 tt 242  Q
    ||    
T  24320622 tt 24320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 29988054 - 29987952
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagc-aaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||| |||||||||||||||| || |||||||||| ||||||||| ||| | |||||||||| ||||||| |||||| || ||||||||| |||||    
T  29988054 tgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagtagattttagcagcaaaaaaggtggagtattagaacgattgcatatga 29987955  T
Q  240 ttt 242  Q
    |||    
T  29987954 ttt 29987952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 34132183 - 34132082
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||| || |||||||||| |||||||| |||||||||| ||  ||||||| | ||||||||||||||||||||| |||| || ||||| ||||||||||    
T  34132183 tgatggcatgtcatcttactttattcttagcatgtttttcagctattttcattaggttttagcagcaaaaaggagaagtattagaacgactgcctatgat 34132084  T
Q  241 tt 242  Q
    ||    
T  34132083 tt 34132082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 19053201 - 19053097
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttt-ttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||| ||||||||||||| |||||||| | ||| ||||||||| | ||||  |||||||||||||||||| || ||| |||||||||    
T  19053201 ttgtgatgacatgtcattttacgttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaaggaggagtattagaacaattgcctat 19053102  T
Q  238 gattt 242  Q
     ||||    
T  19053101 aattt 19053097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 28666579 - 28666487
Alignment:
Q  152 tcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    |||||||| |||||||||  ||||||||| | ||||||||||| ||||||||||||||||||||| |||| || || || |||||||||||||    
T  28666579 tcatcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaaggagaagtattagaatgactgcctatgatttt 28666487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 22797422 - 22797521
Alignment:
Q  144 atgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||||  | |||||||  |||||||||||| |||| || | ||||||||||||||||    
T  22797422 atgacaggtcatcttacgttattattcgcatgtttttcagtcattttcgataggttttattagcaaaaaggagaagtattagagcgattgcctatgattt 22797521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 25400738 - 25400829
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattg 232  Q
    |||||| | ||||| ||||||||||||| |||||||||| ||||||||||| | ||||||||||| ||||||||||| || || ||||||||    
T  25400738 tgatgagaggtcattttacgttattcttagcatgtttttcagtcattttcattaggttttagcaggaaaaaggaggaatattagaacgattg 25400829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 23338988 - 23338888
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| ||||||||| ||||||||| |||||||||| | ||||||||| | ||||||||||| |||||| | || || || ||||||||||||||||    
T  23338988 tgatgacaggtcatcttaggttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaaga-tattagaacgattgcctatgat 23338890  T
Q  241 tt 242  Q
    ||    
T  23338889 tt 23338888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 26069346 - 26069245
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||||||||||| | ||||| ||||| ||  |||||||| || ||| ||||| ||||||    
T  26069346 tgatgacaagttatcttacgttattcttaacatgttttttagtcattttcagtagattttaccagcagaacagaggagtattagaacaattgcttatgat 26069247  T
Q  241 tt 242  Q
    ||    
T  26069246 tt 26069245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 17469569 - 17469660
Alignment:
Q  153 catcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||||||||||||||| |||||||||| | ||||||||||  ||||||| ||||||||  |||||||| || | | |||||||||||||||    
T  17469569 catcttacgttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaacagaggagtattagagcaattgcctatgatttt 17469660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 25572475 - 25572538
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||||| ||||||| |||||||    
T  25572475 ttgtgatgacaagtcatcctacgttattcttagcatgtttttcagtcaatttcagtaggtttta 25572538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 24162014 - 24162112
Alignment:
Q  145 tgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||| ||||| ||||||||||||| |||||||||| ||||||||||| | | ||||| |||||||| |||| |||| || ||  ||||||||||||||    
T  24162014 tgacaggtcattttacgttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaatggagaagtattagaataattgcctatgattt 24162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5998797 - 5998841
Alignment:
Q  20 gtattggacaaccatctttcaaaaatacatgaacaaaatgattgg 64  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  5998797 gtattggacacccatctttcaaaaatatatgaacaaaatgattgg 5998841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 23214824 - 23214904
Alignment:
Q  141 gtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||| |    ||||||| |||||||||||||||    
T  23214824 gtgatgacaggtcatcttacgttattcttagcatgtttttcagttattttcaatacagtttagcaacaaaaaggaggagta 23214904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 23266913 - 23266853
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgt-ttttagtcattttcagtcggtttta 201  Q
    |||||||| |||||||||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  23266913 tgatgacaggtcatcttacattatttttggcatgttttttagtcattttcagtaggtttta 23266853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 34488957 - 34488885
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    |||||||| || ||||||||||||||||||| |||||||||| ||||||||| ||| || |||| ||||||||    
T  34488957 ttgtgatggcaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggatttaccagcaaaa 34488885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 15532877 - 15532916
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15532877 ttaaccacaaaagaattagttactcatagctaaagtataa 15532916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 15543059 - 15543098
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15543059 ttaaccacaaaagaattagttactcatagctaaagtataa 15543098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 25920918 - 25920827
Alignment:
Q  152 tcatcttacgttattcttggcatgttttta-gtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    |||||||||||||||||| |||| |||||  |||||||||||| || |||| |||||||| ||| ||||| || | | ||||||||||||||    
T  25920918 tcatcttacgttattcttagcatatttttttgtcattttcagtaggatttaccagcaaaacggatgagtattagagcaattgcctatgattt 25920827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 33574657 - 33574618
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  33574657 ttaaccacaaaagaattagttactcatagctaaagtataa 33574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 14617074 - 14617140
Alignment:
Q  243 tcatagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    |||||| |||| |||| |||||| ||||||||||||| ||||  |||||||||||||| ||||||||    
T  14617074 tcataggattacatcatattcatctcaagcttaaccagaaagagattagttactcataactaaagta 14617140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 15691361 - 15691304
Alignment:
Q  146 gacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttag 202  Q
    |||| ||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||    
T  15691361 gacatgtcatcttacgttattcttagcatattttttagtcattttcagtaggttttag 15691304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 17831792 - 17831739
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagt 193  Q
    |||||||||| ||||||||||||||||||| ||||||||||   ||||||||||    
T  17831792 tgtgatgacatgtcatcttacgttattcttagcatgtttttcagcattttcagt 17831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 31600072 - 31600144
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaa 210  Q
    ||||||||||| ||| ||||||||||||||| |||||||||| |||| ||||| || ||||||| || |||||    
T  31600072 ttgtgatgacaggtcctcttacgttattcttagcatgtttttaagtctttttccgtaggttttaccaacaaaa 31600144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 16521962 - 16522005
Alignment:
Q  200 tagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    ||||||||||| ||||||||| || |||||||||||||||||||    
T  16521962 tagcagcaaaatggaggagtattagaacgattgcctatgatttt 16522005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 23110196 - 23110275
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatg-tttttagtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    |||||||  |||||||||||||||||||  |||| |||||||||||| || || ||||||| ||||||||  ||||||||    
T  23110196 tgatgacgtgtcatcttacgttattcttaacatgttttttagtcattatcggtaggttttaacagcaaaacagaggagta 23110275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 24658342 - 24658401
Alignment:
Q  183 tcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||| ||| |||||||||||||||||||||||||| ||  | ||| |||||||||||    
T  24658342 tcatttttagtaggttttagcagcaaaaaggaggagtattagtaagatagcctatgattt 24658401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 19761581 - 19761639
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtt-tttagtcattttcagtcggttt 199  Q
    |||||||| |||||||||||||||| || ||||||| || ||||||||||||| |||||    
T  19761581 tgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtaggttt 19761639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 34405447 - 34405382
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| ||||||| ||||| ||||  |||||||||||||| ||| ||||    
T  34405447 cataggattacatcagattcatctcaagctgaaccataaagagattagttactcataactacagta 34405382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 24513194 - 24513234
Alignment:
Q  140 tgtgatgacaagtcatcttacgttattcttggcatgttttt 180  Q
    |||||| ||| ||||||||||||||||||| ||||||||||    
T  24513194 tgtgattacaggtcatcttacgttattcttagcatgttttt 24513234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 26315283 - 26315180
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggca--tgtttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatga 239  Q
    |||||||| ||||||||||||||||||| |||  | ||||| || |||||  || ||||||| ||||| ||  |||||||| || |||| |||| |||||    
T  26315283 tgatgacatgtcatcttacgttattcttagcatttttttttggttattttatgtaggttttaccagcataagagaggagtattagaacggttgcttatga 26315184  T
Q  240 tttt 243  Q
    ||||    
T  26315183 tttt 26315180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 20252 - 20353
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||||||||||||||||||||||| |||||||||| | |  | || ||| ||   ||||||||||||||||||||| || ||||||||||||||||    
T  20252 tgatgacaagtcatcttacgttattcttagcatgtttttcaattttatttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatgat 20351  T
Q  241 tt 242  Q
    ||    
T  20352 tt 20353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 6550 - 6449
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| || |||||||||||||||| |||||||||| ||| ||||||| | || ||||||| |||||| |||||||| || |||||| | |||||||    
T  6550 tgatgacatgttatcttacgttattcttagcatgtttttcagttattttcaataggatttagcaacaaaaatgaggagtattagaacgatcgtctatgat 6451  T
Q  241 tt 242  Q
    ||    
T  6450 tt 6449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 192219 - 192118
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||||| |||||||||||||||| || ||||| |||| ||||||||||| | |||||||||||||||| | ||||||  || | ||||||| ||||||    
T  192219 tgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaatgaaggagtgttagagcgattgcttatgat 192120  T
Q  241 tt 242  Q
    ||    
T  192119 tt 192118  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 23136 - 23036
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctat 237  Q
    ||||||||||| ||||||||| | ||||||| |||||| ||| ||| ||||| | | ||| |||||| ||||||||||||||| || |||||||||||||    
T  23136 ttgtgatgacaggtcatcttatgctattcttagcatgtatttcagttattttaattaggtgttagcaccaaaaaggaggagtattagaacgattgcctat 23037  T
Q  238 g 238  Q
    |    
T  23036 g 23036  T

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Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 92828 - 92904
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggagga 217  Q
    ||||||||||| |||||||||||||||| |||||||||| ||| ||||| ||| || |||||||||||||| |||||    
T  92828 tgatgacaagttatcttacgttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaaagagga 92904  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 88433 - 88496
Alignment:
Q  139 ttgtgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggtttta 201  Q
    ||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||| |||||||    
T  88433 ttgtgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggtttta 88496  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 95686 - 95619
Alignment:
Q  176 tttttagtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgatttt 243  Q
    |||| ||||| ||||| | ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  95686 ttttcagtcaatttcaatgggttttagcagcaaaaaagaggagtattagaacgattgcctatgatttt 95619  T

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Target: scaffold0440 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 9609 - 9539
Alignment:
Q  243 tcatagaattatatcagattcatgtcaagc-ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    |||||| |||| ||||||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||||    
T  9609 tcataggattacatcagattcatctcaggaattaaccacaaaagaattagttactcatagctaaagtataa 9539  T

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Target: scaffold0386 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 4874 - 4940
Alignment:
Q  144 atgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaa 209  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||| ||| ||||||| |||||||    
T  4874 atgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaa 4940  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 243831 - 243909
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgtttttagtcattttcagtcggttttagcagcaaaaaggaggagta 220  Q
    ||||||||  |||||||||||||||||| |||| |||||||||||||| ||| |||||||  |||||||  ||||||||    
T  243831 tgatgacatatcatcttacgttattcttagcatatttttagtcattttaagtaggttttactagcaaaacagaggagta 243909  T

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Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 21537 - 21436
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  |||||||||| |||||||   |||||||| ||| | ||||||| |||||||||||||||||||| ||||| || ||| ||||| ||||||    
T  21537 tgatgacagatcatcttacgatattcttacgatgtttttcagttaatttcagtaggttttagcagcaaaaaggatgagtagtagaacaattgcttatgat 21438  T
Q  241 tt 242  Q
    ||    
T  21437 tt 21436  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 182568 - 182612
Alignment:
Q  198 tttagcagcaaaaaggaggagtactacaacgattgcctatgattt 242  Q
    ||||||||||||||||||||||| || ||||||||||||||||||    
T  182568 tttagcagcaaaaaggaggagtattagaacgattgcctatgattt 182612  T

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Target: scaffold0500 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 2260 - 2221
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  2260 ttaaccacaaaagaattagttactcatagctaaagtataa 2221  T

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Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 5827 - 5725
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    |||||| | |||||||| ||||||| ||  ||||||||| ||| ||||| ||| || ||||| ||||||||||||||||| || ||| |||| |||||||    
T  5827 tgatgaaaggtcatctttcgttatttttaacatgtttttcagttatttttagtaggatttagaagcaaaaaggaggagtattagaacaattgtctatgat 5728  T
Q  241 ttt 243  Q
    |||    
T  5727 ttt 5725  T

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Target: scaffold0352 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 3284 - 3322
Alignment:
Q  274 taaccacaaaggaattagttactcatagctaaagtataa 312  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3284 taaccacaaaagaattagttactcatagctaaagtataa 3322  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 41435 - 41335
Alignment:
Q  142 tgatgacaagtcatcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaaaaggaggagtactacaacgattgcctatgat 240  Q
    ||||||||  |||||||| ||||||||| |||||||||| ||| ||||| ||| ||||||| ||||||||  |||||||| || | | ||||||||||||    
T  41435 tgatgacagctcatctta-gttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaacagaggagtattagatcaattgcctatgat 41337  T
Q  241 tt 242  Q
    ||    
T  41336 tt 41335  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 7669 - 7708
Alignment:
Q  273 ttaaccacaaaggaattagttactcatagctaaagtataa 312  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  7669 ttaaccacaaaagaattagttactcataactaaagtataa 7708  T

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Target: scaffold0665 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 291 - 356
Alignment:
Q  244 catagaattatatcagattcatgtcaagcttaaccacaaaggaattagttactcatagctaaagta 309  Q
    ||||| |||| ||||||||||| |||||||||||||  |||  |||||||||||||| ||| ||||    
T  291 cataggattacatcagattcatctcaagcttaaccatgaagagattagttactcataactacagta 356  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 36143 - 36199
Alignment:
Q  154 atcttacgttattcttggcatgttttt-agtcattttcagtcggttttagcagcaaa 209  Q
    ||||||||||||||||  ||||||||| ||||||||||| | ||||||| |||||||    
T  36143 atcttacgttattcttatcatgtttttcagtcattttcaataggttttatcagcaaa 36199  T

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