View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5811_high_16 (Length: 430)

Name: NF5811_high_16
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5811_high_16
NF5811_high_16
[»] chr4 (10 HSPs)
chr4 (1-259)||(55293520-55293778)
chr4 (297-416)||(55293816-55293935)
chr4 (1-51)||(42051669-42051719)
chr4 (1-61)||(28279881-28279941)
chr4 (1-40)||(32949873-32949912)
chr4 (1-44)||(39052921-39052964)
chr4 (2-61)||(44633201-44633260)
chr4 (1-43)||(10099746-10099788)
chr4 (1-51)||(35029079-35029129)
chr4 (5-51)||(55360361-55360407)
[»] chr8 (8 HSPs)
chr8 (1-61)||(25266804-25266864)
chr8 (1-60)||(40077754-40077813)
chr8 (1-62)||(11637184-11637245)
chr8 (1-49)||(8418317-8418365)
chr8 (1-44)||(28791352-28791395)
chr8 (5-44)||(32679083-32679122)
chr8 (1-44)||(41726565-41726608)
chr8 (5-50)||(29638349-29638394)
[»] chr6 (5 HSPs)
chr6 (1-61)||(33017947-33018007)
chr6 (1-60)||(3874054-3874113)
chr6 (1-61)||(3166111-3166171)
chr6 (5-43)||(8232332-8232370)
chr6 (1-43)||(33921490-33921532)
[»] chr3 (7 HSPs)
chr3 (1-60)||(53754068-53754127)
chr3 (1-63)||(48409628-48409690)
chr3 (1-61)||(41287306-41287366)
chr3 (1-44)||(1334801-1334844)
chr3 (1-44)||(51164996-51165039)
chr3 (1-49)||(29858880-29858928)
chr3 (5-44)||(53051074-53051113)
[»] chr1 (18 HSPs)
chr1 (1-60)||(37281002-37281061)
chr1 (1-49)||(50926791-50926839)
chr1 (1-60)||(27209972-27210031)
chr1 (1-60)||(36232794-36232853)
chr1 (5-63)||(21304808-21304866)
chr1 (1-61)||(11425873-11425933)
chr1 (1-61)||(14352610-14352670)
chr1 (1-44)||(12267652-12267695)
chr1 (1-44)||(37495873-37495916)
chr1 (1-40)||(37925271-37925310)
chr1 (1-43)||(4466176-4466218)
chr1 (1-43)||(16040121-16040163)
chr1 (8-50)||(28706638-28706680)
chr1 (1-43)||(29225430-29225472)
chr1 (11-61)||(36326209-36326259)
chr1 (1-50)||(9590556-9590605)
chr1 (1-49)||(46273204-46273252)
chr1 (1-49)||(47293615-47293663)
[»] chr7 (12 HSPs)
chr7 (1-51)||(2849299-2849349)
chr7 (5-61)||(27337876-27337932)
chr7 (1-44)||(45218178-45218221)
chr7 (1-43)||(32776027-32776069)
chr7 (1-61)||(36070149-36070209)
chr7 (1-61)||(43007938-43007998)
chr7 (1-40)||(23111113-23111152)
chr7 (1-44)||(24288467-24288510)
chr7 (1-40)||(38589778-38589817)
chr7 (1-43)||(34064259-34064301)
chr7 (1-61)||(18731483-18731543)
chr7 (1-49)||(39343686-39343734)
[»] chr5 (10 HSPs)
chr5 (1-61)||(25111152-25111212)
chr5 (1-61)||(25170243-25170303)
chr5 (1-44)||(4044498-4044541)
chr5 (1-51)||(36006906-36006956)
chr5 (1-61)||(5357821-5357881)
chr5 (1-40)||(7871357-7871396)
chr5 (1-43)||(16926113-16926155)
chr5 (1-39)||(42818947-42818985)
chr5 (5-61)||(25108621-25108677)
chr5 (5-61)||(25167713-25167769)
[»] chr2 (7 HSPs)
chr2 (1-61)||(1908497-1908557)
chr2 (1-44)||(9724922-9724965)
chr2 (1-61)||(37529074-37529134)
chr2 (1-40)||(2048336-2048375)
chr2 (1-44)||(24356155-24356198)
chr2 (2-40)||(38280220-38280258)
chr2 (5-61)||(7931499-7931555)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-60)||(352465-352524)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-61)||(12439-12499)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-122; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 55293520 - 55293778
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaacaaataatagaaaataaatactacgtacaaatctttaggc 100  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  55293520 attctactttatatttatgataaacaagaatgcaccaattcttatcaaagacactcaaaacaaataatagaaaataaatactacgtacaaatctttaggc 55293619  T
Q  101 ataaatgcatatgaattaaatccattattaattaattaatttatgaattgatataatgtaacttccgtgtactgtgatgttgacaaattcgatataacac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55293620 ataaatgcatatgaattaaatccattattaattaattaatttatgaattgatataatgtaacttccgtgtactgtgatgttgacaaattcgatataacac 55293719  T
Q  201 caccgcattcacctgtcgcagtttcagcgttccattaacgcaaaaattatggacaagag 259  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  55293720 caccgcattcacctgtcgtagtatcagcgttccattaacgcaaaaattatggacaagag 55293778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 297 - 416
Target Start/End: Original strand, 55293816 - 55293935
Alignment:
Q  297 ggacgaaggaggactagaaaagtgaaacattgtttagttgtcgtagacttggttgtgttgtgggttctgtcttctgaatctaactaacaacaaaccaaag 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55293816 ggacgaaggaggactagaaaagtgaaacattgtttagttgtcgtagacttggttgtgttgtgggttctgtcttctgaatctaactaacaacaaaccaaag 55293915  T
Q  397 aagcatagatagatctatat 416  Q
    ||||||||||||||||||||    
T  55293916 aagcatagatagatctatat 55293935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42051719 - 42051669
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaaga 51  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  42051719 attctactttacatttatgataaagaagaatgcaccaatacttgctaaaga 42051669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28279881 - 28279941
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    ||||||||||| |||||||||||| ||||||||||||||||||  ||||||  ||||||||    
T  28279881 attctactttatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaac 28279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32949912 - 32949873
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaata 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32949912 attctactttacatttatgataaagaaaaatgcaccaata 32949873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39052964 - 39052921
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  39052964 attctactttacatttatgataaagaagaatgcaccaatacttg 39052921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 44633201 - 44633260
Alignment:
Q  2 ttctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    ||||||||||||||||| ||||| || |||||||||||||||| ||||||  ||||||||    
T  44633201 ttctactttacatttatcataaagaagaatgcaccaatacttgacaaagacactcaaaac 44633260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10099788 - 10099746
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  10099788 attctactttaaatttatgataaagaaaaatgcaccaatactt 10099746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35029079 - 35029129
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaaga 51  Q
    |||||||||||||||||||||||| || |||| || |||||||| ||||||    
T  35029079 attctactttacatttatgataaagaagaatgtactaatacttgacaaaga 35029129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 55360407 - 55360361
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaaga 51  Q
    |||||||||||||||||||| || ||||| |||||||||| ||||||    
T  55360407 tactttacatttatgataaagaagaatgcgccaatacttgacaaaga 55360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25266864 - 25266804
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || ||||||||||||| || |||||||||| |||||    
T  25266864 attctactttacatttatgataaagaagaatgcaccaatacatgacaaagattcttaaaac 25266804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40077813 - 40077754
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||  |||||||    
T  40077813 attctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaa 40077754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11637184 - 11637245
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaaca 62  Q
    |||||||||||||||||||||||| || |||| | ||||||||| ||||||  |||||||||    
T  11637184 attctactttacatttatgataaagaataatgtatcaatacttggcaaagacactcaaaaca 11637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8418365 - 8418317
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaa 49  Q
    |||||||||||||||||||||||| || |||||| ||||||||| ||||    
T  8418365 attctactttacatttatgataaagaataatgcatcaatacttgacaaa 8418317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28791352 - 28791395
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||| ||||||||||||||||| || ||||||||||||||||    
T  28791352 attctagtttacatttatgataaagaagaatgcaccaatacttg 28791395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 32679083 - 32679122
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  32679083 tactttacatttatgataaagaataatgcaccaatacttg 32679122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41726565 - 41726608
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || |||||| |||||||||    
T  41726565 attctactttacatttatgataaagaagaatgcaacaatacttg 41726608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 29638349 - 29638394
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaag 50  Q
    |||||||||||||||||||| || |||| ||||||||||| |||||    
T  29638349 tactttacatttatgataaagaataatgaaccaatacttgacaaag 29638394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33018007 - 33017947
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||  ||||||||    
T  33018007 attctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaaaac 33017947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3874113 - 3874054
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    |||| ||||||||||||||||||| || |||||||||||||||| ||||||  |||||||    
T  3874113 attcaactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaa 3874054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3166171 - 3166111
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| |||||| || |||||||||  |||||  ||||||||    
T  3166171 attctactttacatttatgataaagaaaaatacatcaatacttgttaaagacactcaaaac 3166111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 8232370 - 8232332
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||||||||||||| || |||||||||||||||    
T  8232370 tactttacatttatgataaagaagaatgcaccaatactt 8232332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33921532 - 33921490
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  33921532 attctactttacatttatgataaagaagaatggaccaatactt 33921490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53754127 - 53754068
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    |||||||||||||||||||||||| || ||||||||||||||| |||||||  |||||||    
T  53754127 attctactttacatttatgataaagaagaatgcaccaatacttaccaaagacactcaaaa 53754068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48409628 - 48409690
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaacaa 63  Q
    |||||||||||||||||||||||| || ||| |||||||||||| ||||||  ||||||||||    
T  48409628 attctactttacatttatgataaagaagaatccaccaatacttgacaaagacactcaaaacaa 48409690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41287306 - 41287366
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || |||||| ||||||||| |||||||  |||||||    
T  41287306 attctactttacatttatgataaagaataatgcatcaatacttgacaaagatagtcaaaac 41287366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1334844 - 1334801
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  1334844 attctactttacatttatgataaagaagaatgcaccaatacttg 1334801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51164996 - 51165039
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  51164996 attctactttacatttatgataaagaagaatgcaccaatacttg 51165039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29858928 - 29858880
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaa 49  Q
    |||||||||||||||||||||||| || |||| ||||||||||| ||||    
T  29858928 attctactttacatttatgataaagaagaatgtaccaatacttgacaaa 29858880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 53051074 - 53051113
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  53051074 tactttacatttatgataaacaagaatgcacaaatacttg 53051113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37281061 - 37281002
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||  |||||||    
T  37281061 attctactttacatttatgataaaaaagaatgcaccaatacttgacaaagacactcaaaa 37281002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50926791 - 50926839
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaa 49  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||    
T  50926791 attctactttacatttatgataaagaagaatgcaccaatacttgacaaa 50926839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27210031 - 27209972
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    ||||| |||||||||||||||||| || |||||||||||||||| ||||||  |||||||    
T  27210031 attctcctttacatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaa 27209972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36232853 - 36232794
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    ||||||||||| |||||||||||| || |||||||||||||||| ||||||  |||||||    
T  36232853 attctactttatatttatgataaagaagaatgcaccaatacttgtcaaagacactcaaaa 36232794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21304866 - 21304808
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaacaa 63  Q
    ||||||| |||||||||||| ||||||||| ||||||||| ||||||  ||||||||||    
T  21304866 tactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaacaa 21304808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11425933 - 11425873
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || |||| ||||||||||  ||||||  ||||||||    
T  11425933 attctactttacatttatgataaagaagaatggaccaatacttaacaaagacactcaaaac 11425873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14352610 - 14352670
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    ||||||||||| ||||| |||||| || |||||||||||||||| ||||||  ||||||||    
T  14352610 attctactttatatttacgataaagaagaatgcaccaatacttgacaaagacactcaaaac 14352670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12267695 - 12267652
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || |||| |||||||||||    
T  12267695 attctactttacatttatgataaagaagaatgtaccaatacttg 12267652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37495873 - 37495916
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||| ||||| || ||||||||||||||||    
T  37495873 attctactttacatttataataaagaagaatgcaccaatacttg 37495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37925310 - 37925271
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaata 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  37925310 attctactttgcatttatgataaagaaaaatgcaccaata 37925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4466218 - 4466176
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  4466218 attctactttacatttatgataaagaagaatggaccaatactt 4466176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16040121 - 16040163
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||||||||||||||||| || |||| ||||||||||    
T  16040121 attctactttacatttatgataaagaagaatgaaccaatactt 16040163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 28706680 - 28706638
Alignment:
Q  8 tttacatttatgataaacaaaaatgcaccaatacttgccaaag 50  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||    
T  28706680 tttacatttatgataaagaaaaatgcatcaatacttgacaaag 28706638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29225472 - 29225430
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||| ||||||||||||| || |||||||||||||||    
T  29225472 attctactttccatttatgataaaaaagaatgcaccaatactt 29225430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 36326259 - 36326209
Alignment:
Q  11 acatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    ||||||||||||||||| |||||||||||| ||| ||||||  ||||||||    
T  36326259 acatttatgataaacaagaatgcaccaatatttgacaaagacactcaaaac 36326209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9590556 - 9590605
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaag 50  Q
    ||||||||||| |||||||||||| || ||||||| |||||||| |||||    
T  9590556 attctactttatatttatgataaataataatgcacaaatacttgacaaag 9590605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46273204 - 46273252
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaa 49  Q
    ||||||||||||||||| |||||| || |||||| ||||||||| ||||    
T  46273204 attctactttacatttaagataaagaagaatgcatcaatacttgacaaa 46273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47293663 - 47293615
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaa 49  Q
    |||||| |||| |||||||||||| || |||||||||||||||| ||||    
T  47293663 attctaatttatatttatgataaagaagaatgcaccaatacttgacaaa 47293615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2849299 - 2849349
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  2849299 attctactttacatttatgataaagaagaatgcaccaatacttgacaaaga 2849349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 27337932 - 27337876
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||  ||||||||    
T  27337932 tactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaac 27337876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45218221 - 45218178
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  45218221 attctactttacatttatgataaagaagaatgcaccaatacttg 45218178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32776027 - 32776069
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  32776027 attctactttacatttatgataaagaagaatgcaccaatactt 32776069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36070149 - 36070209
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||| ||||||||||| || |||||||||||| ||| ||||||  ||||||||    
T  36070149 attctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaac 36070209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43007938 - 43007998
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||| |||| |||||||||||| |||||||||| |||||||| ||||||  ||||||||    
T  43007938 attctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaac 43007998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23111152 - 23111113
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaata 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  23111152 attctactttacatttatgataaagaagaatgcaccaata 23111113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24288467 - 24288510
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||| ||||||||    
T  24288467 attctactttacatttatgataaagaagaatgcacaaatacttg 24288510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 38589778 - 38589817
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaata 40  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  38589778 attctactttacatttatgataaagaagaatgcaccaata 38589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34064259 - 34064301
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||||||||||||||||  || |||||||||||||||    
T  34064259 attctactttacatttatgataagaaagaatgcaccaatactt 34064301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18731483 - 18731543
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || ||| || |||||||||  |||||  ||||||||    
T  18731483 attctactttacatttatgataaagaagaattcatcaatacttgataaagacactcaaaac 18731543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39343734 - 39343686
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaa 49  Q
    |||||||||||||||||||||||| || ||| ||| |||||||| ||||    
T  39343734 attctactttacatttatgataaagaagaatacacaaatacttgacaaa 39343686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25111212 - 25111152
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || |||||| ||||||||| ||||||  ||||||||    
T  25111212 attctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaac 25111152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25170303 - 25170243
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || |||||| ||||||||| ||||||  ||||||||    
T  25170303 attctactttacatttatgataaagaagaatgcagcaatacttgacaaagacactcaaaac 25170243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4044541 - 4044498
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  4044541 attctactttacatttatgataaagaagaatgcaccaatacttg 4044498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36006956 - 36006906
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaaga 51  Q
    |||||||||||||||||||||||| || ||||||| |||||||| ||||||    
T  36006956 attctactttacatttatgataaagaagaatgcacaaatacttgacaaaga 36006906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5357881 - 5357821
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || |||| ||||||||||  ||||||  ||||||||    
T  5357881 attctactttacatttatgataaagaagaatgaaccaatacttaacaaagacactcaaaac 5357821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7871357 - 7871396
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaata 40  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  7871357 attctactttacatttatgataaagaaaaatacaccaata 7871396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16926155 - 16926113
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatactt 43  Q
    |||||||||| ||||||||||||| || |||||||||||||||    
T  16926155 attctactttccatttatgataaagaagaatgcaccaatactt 16926113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42818947 - 42818985
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaat 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  42818947 attctactttacatttatgataaagaagaatgcaccaat 42818985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25108621 - 25108677
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||| || |||||| ||||||||  ||||||  ||||||||    
T  25108621 tactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaac 25108677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25167713 - 25167769
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||| || |||||| ||||||||  ||||||  ||||||||    
T  25167713 tactttacatttatgataaagaagaatgcagcaatacttaacaaagacactcaaaac 25167769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1908557 - 1908497
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| |||||  ||||||||    
T  1908557 attctactttacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaac 1908497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9724922 - 9724965
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  9724922 attctactttacatttatgataaagaagaatgcaccaatacttg 9724965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37529134 - 37529074
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||||||| ||||||  ||||||||||  ||||||  ||||||||    
T  37529134 attctactttacatttatgataaagaaaaatagaccaatacttaacaaagacactcaaaac 37529074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2048336 - 2048375
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaata 40  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  2048336 attctactttgcatttatgataaacaagaatgcaccaata 2048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24356155 - 24356198
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttg 44  Q
    |||||||||||||||||||||||| || |||||| |||||||||    
T  24356155 attctactttacatttatgataaagaagaatgcatcaatacttg 24356198  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 38280258 - 38280220
Alignment:
Q  2 ttctactttacatttatgataaacaaaaatgcaccaata 40  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  38280258 ttctactttacatttatgataaagaagaatgcaccaata 38280220  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 7931555 - 7931499
Alignment:
Q  5 tactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||||| || ||||||| ||||||||  |||||  ||||||||    
T  7931555 tactttacatttatgataaagaagaatgcactaatacttgaaaaagacactcaaaac 7931499  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 352524 - 352465
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaa 60  Q
    |||||||||||||||||||||||| || |||||||||||||||  ||||||  |||||||    
T  352524 attctactttacatttatgataaagaagaatgcaccaatacttaacaaagacactcaaaa 352465  T

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Target: scaffold0262 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12499 - 12439
Alignment:
Q  1 attctactttacatttatgataaacaaaaatgcaccaatacttgccaaagattctcaaaac 61  Q
    |||||||||||||||||| ||||| || ||||||| |||||||| ||||||  ||||||||    
T  12499 attctactttacatttataataaagaagaatgcactaatacttgacaaagacactcaaaac 12439  T

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