View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5811_high_74 (Length: 237)
Name: NF5811_high_74
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5811_high_74 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 37157793 - 37157557
Alignment:
| Q |
1 |
atgtgacaaatactatgttatggtcggtggacaaaaggaaaaaggaattagaggaatgttagggagtgtagctttgttagcattttgtaatagtggtcat |
100 |
Q |
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| T |
37157793 |
atgtgacaaatactatgttatggtcggtggacaaaaggaaaaaggaattagaggaatgttagggagtgtagctttgttagcattttgtaatagtggtcat |
37157694 |
T |
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| Q |
101 |
gttgattatgctaaggtattcttagctttcatgttgggctaagacaggaatctataattgtgcaaattatatctttttgcagtgtacttaatttacaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37157693 |
gttgattatgctaaggtattcttagctttcatgttgggctaagacaggaatctataattgtgcaaattatatctttttgcagtgtacttaatttacaaac |
37157594 |
T |
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| Q |
201 |
tgttcgtttcttttggcgcctcaatattcttttttct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
37157593 |
tgttcgtttcttttggcgcctcaatattcttttttct |
37157557 |
T |
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