View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5811_high_80 (Length: 228)

Name: NF5811_high_80
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5811_high_80
NF5811_high_80
[»] chr3 (24 HSPs)
chr3 (72-200)||(10344335-10344459)
chr3 (71-158)||(51165845-51165931)
chr3 (105-161)||(1043966-1044022)
chr3 (105-161)||(46739350-46739406)
chr3 (78-161)||(51256610-51256691)
chr3 (78-172)||(32833712-32833804)
chr3 (105-187)||(21659156-21659237)
chr3 (99-161)||(22099814-22099876)
chr3 (105-183)||(52638074-52638151)
chr3 (78-161)||(7672736-7672817)
chr3 (78-161)||(8126146-8126227)
chr3 (105-161)||(16127789-16127845)
chr3 (93-153)||(27102158-27102218)
chr3 (78-153)||(42595788-42595861)
chr3 (105-172)||(39530427-39530494)
chr3 (72-137)||(19843927-19843991)
chr3 (105-158)||(54726096-54726149)
chr3 (105-161)||(7933561-7933617)
chr3 (105-161)||(38014838-38014894)
chr3 (105-161)||(40326479-40326535)
chr3 (105-161)||(40504109-40504165)
chr3 (105-161)||(44435217-44435273)
chr3 (105-165)||(53717936-53717996)
chr3 (78-161)||(54680505-54680586)
[»] chr8 (21 HSPs)
chr8 (99-187)||(7256922-7257009)
chr8 (85-161)||(29916174-29916249)
chr8 (78-161)||(34194576-34194657)
chr8 (69-172)||(42795101-42795203)
chr8 (122-183)||(3105841-3105902)
chr8 (105-153)||(15754486-15754534)
chr8 (89-161)||(20524192-20524263)
chr8 (105-161)||(27781925-27781981)
chr8 (78-161)||(35969705-35969786)
chr8 (105-161)||(42631822-42631878)
chr8 (105-172)||(32032981-32033048)
chr8 (99-161)||(5040103-5040165)
chr8 (78-158)||(40716762-40716840)
chr8 (105-153)||(2552849-2552897)
chr8 (105-161)||(3611812-3611868)
chr8 (105-161)||(8568861-8568917)
chr8 (109-161)||(13271736-13271788)
chr8 (105-161)||(26489646-26489702)
chr8 (84-187)||(35969684-35969784)
chr8 (105-161)||(38883989-38884045)
chr8 (78-198)||(42795101-42795221)
[»] chr6 (11 HSPs)
chr6 (12-56)||(32720053-32720097)
chr6 (99-160)||(11400756-11400817)
chr6 (105-161)||(10731514-10731570)
chr6 (78-161)||(31577455-31577536)
chr6 (63-146)||(3586062-3586144)
chr6 (105-178)||(3212282-3212355)
chr6 (78-158)||(5301933-5302011)
chr6 (78-161)||(15467589-15467670)
chr6 (105-161)||(7418918-7418974)
chr6 (105-161)||(21478596-21478652)
chr6 (106-170)||(33169216-33169280)
[»] chr5 (40 HSPs)
chr5 (78-161)||(15965972-15966053)
chr5 (78-172)||(37685002-37685094)
chr5 (105-183)||(9004969-9005046)
chr5 (78-187)||(37554365-37554471)
chr5 (78-161)||(7581401-7581482)
chr5 (78-161)||(31787261-31787342)
chr5 (99-178)||(3100431-3100510)
chr5 (105-187)||(11784303-11784385)
chr5 (78-187)||(21163548-21163654)
chr5 (105-161)||(7336896-7336952)
chr5 (78-161)||(14571024-14571105)
chr5 (99-183)||(17096478-17096561)
chr5 (89-176)||(8468382-8468468)
chr5 (105-172)||(27990389-27990456)
chr5 (105-172)||(35172462-35172529)
chr5 (99-161)||(14642059-14642121)
chr5 (105-187)||(21152606-21152687)
chr5 (105-187)||(21159741-21159822)
chr5 (78-187)||(21163546-21163652)
chr5 (105-179)||(36137040-36137114)
chr5 (105-187)||(40208518-40208599)
chr5 (78-187)||(10495226-10495334)
chr5 (105-158)||(13420475-13420528)
chr5 (78-158)||(14416422-14416500)
chr5 (105-178)||(15966669-15966742)
chr5 (105-158)||(22565642-22565695)
chr5 (84-172)||(11786618-11786706)
chr5 (84-192)||(12165296-12165403)
chr5 (105-153)||(12891339-12891387)
chr5 (78-161)||(14064826-14064907)
chr5 (105-153)||(14274175-14274223)
chr5 (105-161)||(18942029-18942085)
chr5 (78-161)||(21152604-21152685)
chr5 (78-161)||(21159739-21159820)
chr5 (105-161)||(26168229-26168285)
chr5 (99-151)||(35969076-35969128)
chr5 (78-153)||(36441144-36441217)
chr5 (105-161)||(38860843-38860899)
chr5 (78-161)||(39916301-39916382)
chr5 (105-161)||(43340458-43340514)
[»] chr4 (38 HSPs)
chr4 (78-161)||(42013162-42013243)
chr4 (78-159)||(19754231-19754310)
chr4 (78-159)||(19785496-19785575)
chr4 (62-183)||(20542803-20542921)
chr4 (78-158)||(24331441-24331519)
chr4 (67-151)||(42184692-42184774)
chr4 (78-192)||(24275233-24275344)
chr4 (78-187)||(23329388-23329494)
chr4 (105-187)||(29978533-29978614)
chr4 (78-161)||(34827489-34827569)
chr4 (99-172)||(40952574-40952647)
chr4 (78-187)||(42013164-42013272)
chr4 (78-161)||(13743874-13743955)
chr4 (105-161)||(17028276-17028332)
chr4 (105-161)||(20542846-20542902)
chr4 (105-161)||(40952582-40952638)
chr4 (78-161)||(43635852-43635933)
chr4 (78-161)||(49745506-49745587)
chr4 (78-161)||(50038493-50038574)
chr4 (78-161)||(50045715-50045796)
chr4 (105-161)||(51126146-51126202)
chr4 (107-161)||(3517106-3517160)
chr4 (105-179)||(39294214-39294288)
chr4 (95-161)||(53403034-53403100)
chr4 (78-138)||(20541109-20541167)
chr4 (99-192)||(48806268-48806361)
chr4 (105-161)||(11583748-11583804)
chr4 (121-209)||(11843954-11844042)
chr4 (105-161)||(23710876-23710932)
chr4 (105-161)||(23754235-23754291)
chr4 (105-161)||(24529616-24529672)
chr4 (105-153)||(25856061-25856109)
chr4 (105-161)||(32112357-32112413)
chr4 (105-161)||(48042632-48042688)
chr4 (105-161)||(50519303-50519359)
chr4 (105-161)||(51126148-51126204)
chr4 (105-161)||(54675313-54675369)
chr4 (105-161)||(55131579-55131635)
[»] chr2 (30 HSPs)
chr2 (107-187)||(3197975-3198055)
chr2 (99-172)||(921851-921924)
chr2 (105-161)||(9071248-9071304)
chr2 (105-175)||(10041571-10041641)
chr2 (105-175)||(10099581-10099651)
chr2 (99-161)||(29771753-29771815)
chr2 (105-158)||(25668452-25668505)
chr2 (105-161)||(4637048-4637104)
chr2 (105-161)||(38721426-38721482)
chr2 (121-172)||(324828-324879)
chr2 (95-150)||(26269324-26269379)
chr2 (61-136)||(31211211-31211285)
chr2 (105-172)||(43514788-43514855)
chr2 (121-187)||(30905181-30905246)
chr2 (62-136)||(31175080-31175153)
chr2 (52-172)||(42579051-42579170)
chr2 (99-172)||(9071240-9071313)
chr2 (78-151)||(31596813-31596884)
chr2 (105-161)||(4898208-4898264)
chr2 (105-161)||(4945602-4945658)
chr2 (105-161)||(5144311-5144367)
chr2 (78-161)||(8554687-8554768)
chr2 (105-161)||(9709701-9709757)
chr2 (105-161)||(17843994-17844050)
chr2 (78-161)||(20195305-20195386)
chr2 (78-161)||(24971221-24971302)
chr2 (105-161)||(30202525-30202581)
chr2 (105-161)||(34911141-34911197)
chr2 (105-153)||(40340520-40340568)
chr2 (78-161)||(45123838-45123919)
[»] chr1 (29 HSPs)
chr1 (71-187)||(8426736-8426851)
chr1 (105-161)||(15278606-15278662)
chr1 (105-161)||(31909790-31909846)
chr1 (105-172)||(24478706-24478773)
chr1 (62-172)||(35049932-35050040)
chr1 (99-161)||(38824334-38824396)
chr1 (72-137)||(13145799-13145863)
chr1 (64-161)||(42629586-42629682)
chr1 (78-161)||(21909857-21909938)
chr1 (105-161)||(26059162-26059218)
chr1 (78-161)||(37255142-37255223)
chr1 (105-192)||(17310430-17310517)
chr1 (99-153)||(2492527-2492581)
chr1 (99-153)||(42788363-42788417)
chr1 (99-153)||(48376856-48376910)
chr1 (108-158)||(52132840-52132890)
chr1 (105-161)||(4682980-4683036)
chr1 (105-161)||(5852731-5852787)
chr1 (105-161)||(8751473-8751529)
chr1 (105-153)||(15311513-15311561)
chr1 (105-161)||(25378300-25378356)
chr1 (105-161)||(27549086-27549142)
chr1 (109-161)||(33738208-33738260)
chr1 (105-153)||(38847343-38847391)
chr1 (105-161)||(39015604-39015660)
chr1 (128-192)||(43020396-43020459)
chr1 (105-153)||(45239042-45239090)
chr1 (105-161)||(46517986-46518042)
chr1 (105-161)||(47011285-47011341)
[»] chr7 (21 HSPs)
chr7 (78-172)||(27942341-27942433)
chr7 (105-172)||(47778470-47778537)
chr7 (78-161)||(3498337-3498418)
chr7 (105-161)||(19531994-19532050)
chr7 (78-161)||(46477176-46477257)
chr7 (78-161)||(33471533-33471614)
chr7 (78-161)||(35593657-35593738)
chr7 (105-161)||(46578306-46578362)
chr7 (78-161)||(46658775-46658856)
chr7 (94-161)||(27554527-27554594)
chr7 (105-172)||(46221110-46221177)
chr7 (78-187)||(17882726-17882832)
chr7 (107-192)||(18819974-18820059)
chr7 (105-161)||(1565455-1565511)
chr7 (110-158)||(12171705-12171753)
chr7 (62-150)||(19197765-19197852)
chr7 (105-161)||(27940788-27940844)
chr7 (105-153)||(31319557-31319605)
chr7 (106-158)||(31758525-31758577)
chr7 (78-161)||(33471506-33471587)
chr7 (105-161)||(37066223-37066279)
[»] scaffold0340 (1 HSPs)
scaffold0340 (78-161)||(14049-14130)
[»] scaffold0635 (1 HSPs)
scaffold0635 (105-175)||(5429-5499)
[»] scaffold1786 (1 HSPs)
scaffold1786 (105-152)||(562-609)
[»] scaffold0172 (1 HSPs)
scaffold0172 (105-161)||(11625-11681)
[»] scaffold0121 (1 HSPs)
scaffold0121 (105-153)||(17475-17523)
[»] scaffold0111 (1 HSPs)
scaffold0111 (105-153)||(38058-38106)


Alignment Details
Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 10344335 - 10344459
Alignment:
Q  72 tcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaa 171  Q
    ||||| ||||| ||||||| |||||| ||| | |||||||||||||   ||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||    
T  10344335 tcaattataagaaaattttgattttt-taggttcattcaattaata---tatgtgatctatattatgaaccacatacatcattaattgaatgaacttaaa 10344430  T
Q  172 atgttaaaatttacttgtaatcgacaaca 200  Q
    |  | ||||||||||| ||||||||||||    
T  10344431 aaatcaaaatttacttataatcgacaaca 10344459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 51165931 - 51165845
Alignment:
Q  71 gtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    |||||| |||| |||||||| |||||| || || ||||||||||||||||||| |||||||||||||| || ||||||||||| ||||    
T  51165931 gtcaattataaataaattttgattttt-taaatgcattcaattaataatttatatgatctatattatagaccacatacatcattaatt 51165845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 1044022 - 1043966
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| ||||||| || ||||||||||||||||||| ||||||||||||| |||||||    
T  1044022 catttaattaatgatgtatgtgatctatattataagctacatacatcattaattgaa 1043966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 46739406 - 46739350
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||||||||| ||||||||||||||||| ||| | ||||||||| |||||||    
T  46739406 cattcaattaataatgtatgtgatctatattatgaaccatatacatcattaattgaa 46739350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 51256691 - 51256610
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||| |||||||| |||||| || ||||||||||| ||||||||||| |||||||    
T  51256691 ataagcaaattttacttttt--agattcattcagttaataatatatgtggtccatattataaacaacatacatcattaattgaa 51256610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 32833804 - 32833712
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||||||| ||| |||||  ||||  ||||||||||| || |||||| || ||||||| ||||||||||||||| ||||||| ||| ||||||    
T  32833804 ataagtaaatgttacttttt--agattaattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaatgaacttaaaa 32833712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 21659237 - 21659156
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||||||||| || |||||| |||||||||| ||  ||||||||||| ||||||| ||| |||||| | ||||||||||||    
T  21659237 cattcaattaatgatatatgtggtctatattatgaatcacatacatcattaattgaatgaacttaaaaag-taaaatttactt 21659156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 22099814 - 22099876
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| ||||||||||||||| |||||||  |||| || |||||||||||||||| |||||||    
T  22099814 tagatacattcaattaataatgtatgtgacatataataaaaactacatacatcattaattgaa 22099876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 52638074 - 52638151
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaattt 183  Q
    ||||||||||||||| |||||||| ||||||||  || ||||||||||| ||||||| |||  ||||| ||||||||||    
T  52638074 cattcaattaataatgtatgtgatttatattatcgaccacatacatcattaattgaatgaatctaaaa-gttaaaattt 52638151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 7672817 - 7672736
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| ||||||||  |||||||||| ||||| ||| ||||| |||||||    
T  7672817 ataagaaaattttacttttt--agattcattcaattaatgatttatgtagtctatattatgaactagatatatcattaattgaa 7672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 8126146 - 8126227
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||| ||||||| || ||||||||| ||||||||||| ||||| ||||| |||||||    
T  8126146 ataagcaaattttacttttt--agattcatttaattaattatgtatgtgatccatattataaaccacatatatcattaattgaa 8126227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 16127789 - 16127845
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  16127789 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 16127845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 27102218 - 27102158
Alignment:
Q  93 tttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    ||||| ||||| |||||||| |||||| |||||| ||||||||||| || |||||||||||    
T  27102218 tttttttagattcattcaataaataatgtatgtgttctatattatagaccacatacatcat 27102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 42595861 - 42595788
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| || ||||||||||| |||||||||||    
T  42595861 ataagcaaattttacttttt--agattcattcaattaatgatgtatgtggtccatattataaaccacatacatcat 42595788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 39530494 - 39530427
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| ||||||| ||| ||||||    
T  39530494 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacttaaaa 39530427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 19843927 - 19843991
Alignment:
Q  72 tcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattat 137  Q
    ||||| |||||||||||||||||||| || || |||||||||||| || ||| ||| |||||||||    
T  19843927 tcaattataagtaaattttaattttt-taaattcattcaattaatgatgtatctgacctatattat 19843991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 54726096 - 54726149
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||||||||||||| |||||| |||||||||||||  ||||| ||||| ||||    
T  54726096 cattcaattaataatatatgtggtctatattataaatcacatatatcattaatt 54726149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 7933617 - 7933561
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||| | || ||||||||| ||||||||||  ||||||||||| |||||||    
T  7933617 cattcaattattgatgtatgtgatccatattataaatgacatacatcattaattgaa 7933561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 38014894 - 38014838
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||||||||| |||||| || ||| ||||||||||||  ||||| |||||||    
T  38014894 cattcaattaataatgtatgtggtccataatataaactacatggatcattaattgaa 38014838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 40326479 - 40326535
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |  ||||||||||| ||||||||||| |||||||    
T  40326479 cattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattgaa 40326535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 40504165 - 40504109
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||||||||| |||||||| ||||||||  |  ||||||||||| |||||||    
T  40504165 cattcaattaataatgtatgtgatttatattatggatcacatacatcattaattgaa 40504109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 44435273 - 44435217
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  44435273 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 44435217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 53717996 - 53717936
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaa 165  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||| ||| |||||||||||    
T  53717996 cattcaattaatgatgtatgtggtccatattatgaaccacatacaccattaattgaaagaa 53717936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 54680505 - 54680586
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || ||||||||  ||| |||  |||||||||||||| |||||||    
T  54680505 ataagtaaattttacttttt--aggtacattcaattaatgatgtatgtgattcataatatggactacatacatcattaattgaa 54680586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 7256922 - 7257009
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    ||||| ||||||||||||||| |||||| || ||||||| ||| ||||||||||| ||||||| ||| |||||| | ||||||||||||    
T  7256922 tagattcattcaattaataatgtatgtggtccatattatgaacgacatacatcattaattgaatgaacttaaaaag-taaaatttactt 7257009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 29916249 - 29916174
Alignment:
Q  85 aattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||| |||||| ||||| ||||||||| || || ||| |||||||||||||| |||||||||||||| |||||||    
T  29916249 aattttgattttt-tagattcattcaattgatgatgtatatgatctatattatagactacatacatcattaattgaa 29916174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 34194576 - 34194657
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| || ||||||| ||||||||||||||| |||||||    
T  34194576 ataagcaaattttacttttt--agattcattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaa 34194657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 42795101 - 42795203
Alignment:
Q  69 ttgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaatt 168  Q
    |||||||| ||||| ||||||||||||||  || || ||||||||||| || |||||||||||||||||  |  | ||||||||| ||||||| ||| ||    
T  42795101 ttgtcaattataagcaaattttaattttttaagttc-attcaattaatgatgtatgtgatctatattatggaacatatacatcattaattgaatgaactt 42795199  T
Q  169 aaaa 172  Q
    ||||    
T  42795200 aaaa 42795203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 3105841 - 3105902
Alignment:
Q  122 atgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaattt 183  Q
    |||||||||||||||| ||| ||||||||||| ||||||| ||| |||||| || |||||||    
T  3105841 atgtgatctatattatgaaccacatacatcattaattgaatgaacttaaaaagtcaaaattt 3105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 15754534 - 15754486
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||| ||||| || ||||||||||||||||| |||||||||||||||    
T  15754534 cattcatttaatgatgtatgtgatctatattatgaactacatacatcat 15754486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 20524192 - 20524263
Alignment:
Q  89 ttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||| ||||| ||||||||||||||| ||| || || ||||||||||| ||||| ||||| |||||||    
T  20524192 ttaattttt-tagattcattcaattaataatgtatatggtccatattataaaccacatatatcattaattgaa 20524263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 27781925 - 27781981
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  27781925 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 27781981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 35969786 - 35969705
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | ||||||||||||||| |||||  | |||||||||||| | ||||||||| |||||||    
T  35969786 ataagtaaattttacttttt--aggttcattcaattaataatgtatgtagtttatattataaaccatatacatcattaattgaa 35969705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 42631878 - 42631822
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  42631878 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 42631822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 32033048 - 32032981
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||| |||||||||| ||| ||||| ||| ||| ||| ||||||||||| ||||||| ||||||||||    
T  32033048 catttaattaataatgtatttgatccataatatgaaccacatacatcattaattgaatgaaattaaaa 32032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 5040103 - 5040165
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  5040103 tagattcattcaattaatgatgtatgtggtccatattatgaacaacatacatcattaattgaa 5040165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 40716762 - 40716840
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| |  ||||||||||| ||||||||||| ||||    
T  40716762 ataagcaaattttacttttt--agattcattcaattaatgatgtatgtggtacatattataaaccacatacatcattaatt 40716840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 2552897 - 2552849
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| || |||||| || ||||||||||| |||||||||||    
T  2552897 cattcaattaatgatgtatgtggtccatattataaaccacatacatcat 2552849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 3611868 - 3611812
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  3611868 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 3611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 8568861 - 8568917
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  8568861 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 8568917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 13271788 - 13271736
Alignment:
Q  109 caattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||| || |||||||| |||| |||||||||||| |||||| |||||||    
T  13271788 caattaatgatatatgtgatttataatataaactacatgcatcattaattgaa 13271736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 26489646 - 26489702
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| |||||||||| |||||| || ||||||||||| |||||||| || |||||||    
T  26489646 cattgaattaataatgtatgtggtccatattataaaccacatacataattaattgaa 26489702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 35969684 - 35969784
Alignment:
Q  84 aaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaattt 183  Q
    ||||||||||||||  || | |||||||||||| || ||| || | |||| |||||||||||||||| || ||||||| |||  ||||| | ||||||||    
T  35969684 aaattttaattttt--aggttcattcaattaatgatgtatatggtttataatataaactacatacattattaattgaatgaacctaaaaag-taaaattt 35969780  T
Q  184 actt 187  Q
    ||||    
T  35969781 actt 35969784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 38884045 - 38883989
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||  || ||||||||||| ||||||||||| |||||||    
T  38884045 cattcaattaatgatgtatgttgtccatattataaaccacatacatcattaattgaa 38883989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 42795221 - 42795101
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    ||||| ||||||| |||||| ||  | |||||||||||| || ||| || || ||| |||| |  ||||||||||| ||||||| ||| ||||||  |||    
T  42795221 ataagcaaattttgatttttttaagttcattcaattaatgatgtatatgttccataatatagatcacatacatcattaattgaatgaacttaaaaaatta 42795122  T
Q  178 aaatttacttgtaatcgacaa 198  Q
    |||||| ||| |||| |||||    
T  42795121 aaatttgcttataattgacaa 42795101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32720053 - 32720097
Alignment:
Q  12 ttttctcataaaaattgtatcaaaccatccattacacacttaatt 56  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  32720053 ttttctcattaaaattgtatcaaaccatccattacacacttaatt 32720097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 11400817 - 11400756
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattga 160  Q
    ||||| |||| |||||||||| |||||| ||||||||||||||||||||||| || ||||||    
T  11400817 tagatgcatttaattaataatatatgtggtctatattataaactacatacataattaattga 11400756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 10731514 - 10731570
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||| ||||| || ||||||||||||||||||||| ||||||||||| |||||||    
T  10731514 cattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaa 10731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 31577455 - 31577536
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || ||||| ||| ||||||| ||||||||||||||| |||||||    
T  31577455 ataagcaaattttatttttt--agattcattcaattaattatgtatgtaatccatattatgaactacatacatcattaattgaa 31577536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 3586144 - 3586062
Alignment:
Q  63 cctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacat 146  Q
    ||||| |||||||| |||| |||||||||| |||| ||| | ||||||||||||||| ||| |||||||||||| | |||||||    
T  3586144 cctccgttgtcaattataaataaattttaaatttt-taggttcattcaattaataatatatatgatctatattacagactacat 3586062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 3212282 - 3212355
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaa 178  Q
    |||||||||||| || |||||||| ||||||||  || ||||||||||| ||||||| |||  |||||||||||    
T  3212282 cattcaattaatgatgtatgtgatttatattatggaccacatacatcattaattgaacgaacctaaaatgttaa 3212355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 5301933 - 5302011
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||||||||||| ||||||  || | ||||||||||||||| |||||| |||||||||||||  ||||| ||||| ||||    
T  5301933 ataagtaaattttgattttt--aggttcattcaattaataatatatgtggtctatattataaatcacatatatcattaatt 5302011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 15467589 - 15467670
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| | |||||  |||| |||| ||||| | || ||||||||||||||||||||  ||||||||||| |||||||    
T  15467589 ataagtaaatttgacttttt--agattcatttaattattgatgtatgtgatctatattataaatcacatacatcattaattgaa 15467670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 7418974 - 7418918
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| ||||||| || |||||| |||||||||| ||| ||||||||||| |||||||    
T  7418974 cattaaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaa 7418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 21478652 - 21478596
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  21478652 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 21478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 33169280 - 33169216
Alignment:
Q  106 attcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaa 170  Q
    ||||||||||| || |||||| || ||||||||||| |||||||| || ||||||| ||| ||||    
T  33169280 attcaattaatgatgtatgtggtccatattataaaccacatacattattaattgaatgaacttaa 33169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 15965972 - 15966053
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||| |||||||||||||| ||||||||||| |||||||    
T  15965972 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaa 15966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 37685094 - 37685002
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||| |||||||| |||||  |||| ||||||||||||||| |||||  |||||||||| ||| ||||||||||| ||||||| ||| ||||||    
T  37685094 ataagcaaattttatttttt--agattcattcaattaataatgtatgtagtctatattatgaaccacatacatcattaattgaatgaacttaaaa 37685002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 9005046 - 9004969
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaattt 183  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| || |||  ||||| ||||||||||    
T  9005046 cattcaattaataatgtatgtgatttatattatagactacatacatcattaattaaatgaatctaaaa-gttaaaattt 9004969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 37554471 - 37554365
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    ||||| |||||||| |||||  |||| ||||||||||||||| |||||  | |||||||| ||| ||||||||||| ||||||| ||| |||||| | ||    
T  37554471 ataagcaaattttatttttt--agattcattcaattaataatgtatgtagtttatattatgaaccacatacatcattaattgaatgaacttaaaaag-ta 37554375  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  37554374 aaatttactt 37554365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 7581401 - 7581482
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||| |||||||| ||||||||||||||||| ||| ||||| ||||| |||||||    
T  7581401 ataagcaaattttacttttt--agattcattcatttaataatgtatgtgatctatattatgaaccacatatatcattaattgaa 7581482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 31787342 - 31787261
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || ||||||||| ||||||| ||| ||||||||||| |||||||    
T  31787342 ataagtaaattttacttttt--agcttcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaa 31787261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 3100510 - 3100431
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaa 178  Q
    ||||| |||||||||||| || ||| |||||| ||||||| ||||||||||||||  |||||| |||  |||||||||||    
T  3100510 tagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaa 3100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 11784385 - 11784303
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||||||||| || |||||||| |||||||| |||||||||||| || ||||||| |||  |||||   ||||||||||||    
T  11784385 cattcaattaatgatgtatgtgatgtatattatgaactacatacattattaattgaatgaacctaaaaaaataaaatttactt 11784303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 21163654 - 21163548
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||| || ||||||||||  ||||||||||| ||||||| |||  ||||| | ||    
T  21163654 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaag-ta 21163558  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  21163557 aaatttactt 21163548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 7336896 - 7336952
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  7336896 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 7336952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 14571024 - 14571105
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  14571024 ataagcaaattttatttttt--agattcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 14571105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 17096478 - 17096561
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaattt 183  Q
    ||||| |||||||| |||||| ||| ||||||||| ||||||| |||||||||||  |||||| |||  ||||| ||||||||||    
T  17096478 tagattcattcaatcaataatgtatttgatctataatataaaccacatacatcattgattgaatgaacctaaaa-gttaaaattt 17096561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 8468382 - 8468468
Alignment:
Q  89 ttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtt 176  Q
    ||||||||| ||||| |||| | |||||||| |||||||||||||||||  || ||||||||||| || |||| |||  |||||||||    
T  8468382 ttaattttt-tagattcatttatttaataatatatgtgatctatattatggaccacatacatcattaaatgaatgaacctaaaatgtt 8468468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 27990456 - 27990389
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||||||||| || ||||| ||||||| ||| ||| | ||||||||| ||||||||||| ||||||    
T  27990456 cattcaattaatgatgtatgtaatctataatatgaaccaaatacatcattaattgaaagaacttaaaa 27990389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 35172529 - 35172462
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||||||||||||| |||||| |||||||||||    ||||||||||| ||||||| ||| ||||||    
T  35172529 cattcaattaataatgtatgtggtctatattataggtcacatacatcattaattgaatgaacttaaaa 35172462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 14642121 - 14642059
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| ||||||||||||||| |||||| |||| | ||||| | ||||||||||| |||||||    
T  14642121 tagattcattcaattaataatgtatgtggtctaaaatataacccacatacatcattaattgaa 14642059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 21152687 - 21152606
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||||||||| || |||||| || ||||||||||  ||||||||||| ||||||| |||  ||||| | ||||||||||||    
T  21152687 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaag-taaaatttactt 21152606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 21159822 - 21159741
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||||||||| || |||||| || ||||||||||  ||||||||||| ||||||| |||  ||||| | ||||||||||||    
T  21159822 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaag-taaaatttactt 21159741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 21163546 - 21163652
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||||| |||| |||  || ||||||||||| ||||||| |||  ||||| | ||    
T  21163546 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacctaaaaag-ta 21163642  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  21163643 aaatttactt 21163652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 36137114 - 36137040
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaa 179  Q
    |||||||||||| || |||||||| || |||||  |||||||||||||| ||||||| |||  ||||| ||||||    
T  36137114 cattcaattaatgatgtatgtgatttaaattatggactacatacatcattaattgaatgaatctaaaaagttaaa 36137040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 40208518 - 40208599
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||||||||| || ||||||||  ||||||||||| ||||| ||||| |||||||  || |||||| | ||||||||||||    
T  40208518 cattcaattaatgatatatgtgattcatattataaaccacatatatcattaattgaataaacttaaaaag-taaaatttactt 40208599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 10495226 - 10495334
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    ||||||||||||| |||||| ||||| |||||||| ||| || |||||| | ||||||||| |  |||| ||||||  ||| || ||| |||||| || |    
T  10495226 ataagtaaattttgattttt-tagattcattcaataaatgatgtatgtggtttatattatagatcacattcatcatttattcaatgaacttaaaaagtga 10495324  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  10495325 aaatttactt 10495334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 13420475 - 13420528
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||||||||||||| ||||||||| ||| ||||||| | ||||||||| ||||    
T  13420475 cattcaattaataatgtatgtgatccataatataaaccatatacatcattaatt 13420528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 14416422 - 14416500
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| || ||||||||||  ||||||||||| ||||    
T  14416422 ataagcaaattttatttttt--agattcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 14416500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 15966742 - 15966669
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaa 178  Q
    |||||||||||| || |||||| || ||| ||||||| ||||||||||| ||||||| |||  ||||| |||||    
T  15966742 cattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaatgaacctaaaaagttaa 15966669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 22565695 - 22565642
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    |||||||||||| || |||| | |||||||||||||| ||||||||||| ||||    
T  22565695 cattcaattaatgatgtatgcggtctatattataaaccacatacatcattaatt 22565642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 11786618 - 11786706
Alignment:
Q  84 aaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||||||||||| ||| | | |||||||||| ||  ||||||||||||| ||  || ||||||||| | ||||||| ||| ||||||    
T  11786618 aaattttaatttttttaggttctttcaattaatgatgcatgtgatctatatcatggaccacatacatctttaattgaatgaacttaaaa 11786706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 12165403 - 12165296
Alignment:
Q  84 aaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaattt 183  Q
    ||||||| |||||| ||| | |||||||||||| || ||| |||| ||||||||| || ||||||||||| |||| || |||  ||||| || |||||||    
T  12165403 aaattttgattttt-taggttcattcaattaatgatgtatatgatttatattatataccacatacatcattaattaaatgaatctaaaaagtcaaaattt 12165305  T
Q  184 acttgtaat 192  Q
     ||| ||||    
T  12165304 gcttataat 12165296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 12891387 - 12891339
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||| ||||| || ||||||||||||||||| ||| |||||||||||    
T  12891387 cattcatttaatgatgtatgtgatctatattatgaaccacatacatcat 12891339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 14064826 - 14064907
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||| || ||||||| ||  ||||||||||| |||||||    
T  14064826 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaattgaa 14064907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 14274175 - 14274223
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||| ||||| || |||||| || |||||||||||||||||||||||    
T  14274175 cattcatttaatgatgtatgtggtccatattataaactacatacatcat 14274223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 18942085 - 18942029
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||||||| ||| | ||||||||| |||||||    
T  18942085 cattcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaa 18942029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 21152604 - 21152685
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||||| |||| |||  || ||||||||||| |||||||    
T  21152604 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaa 21152685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 21159739 - 21159820
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||||| |||| |||  || ||||||||||| |||||||    
T  21159739 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaa 21159820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 26168229 - 26168285
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||| |||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  26168229 cattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 26168285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 35969076 - 35969128
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatc 151  Q
    ||||| |||| ||||||| || |||||| |||||||||||||| |||||||||    
T  35969076 tagattcatttaattaatgatgtatgtggtctatattataaaccacatacatc 35969128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 36441217 - 36441144
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||||| |||||  | || |||||||||||| || ||||||| | ||||||||||| | |||||||||    
T  36441217 ataagtaaattttacttttt--aaattcattcaattaatgatgtatgtgacccatattataaaccatatacatcat 36441144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 38860899 - 38860843
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  38860899 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 38860843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 39916301 - 39916382
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  |||| |||| ||||| | || ||||| ||| ||||||||||| |||||||| || |||||||    
T  39916301 ataagtaaattttacttttt--agattcatttaattattgatgtatgtaatccatattataaaccacatacattattaattgaa 39916382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 43340514 - 43340458
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||||||||||| | |||| |||  || ||||||||||| |||||||    
T  43340514 cattcaattaataatttatgtggtttataatatggaccacatacatcattaattgaa 43340458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 42013162 - 42013243
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  | || |||||||||||| || |||||| |||||||||||||| ||||||||||| |||||||    
T  42013162 ataagtaaattttacttttt--aaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaa 42013243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 19754231 - 19754310
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattg 159  Q
    |||||||||||||| |||||  |||| |||||||||||| || |||||| || ||||||| ||||||||||||||| |||||    
T  19754231 ataagtaaattttacttttt--agattcattcaattaatgatatatgtggtccatattatgaactacatacatcattaattg 19754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 19785575 - 19785496
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattg 159  Q
    |||||||||||||| |||||  |||| |||||||||||| || |||||| || ||||||| ||||||||||||||| |||||    
T  19785575 ataagtaaattttacttttt--agattcattcaattaatgatatatgtggtccatattatgaactacatacatcattaattg 19785496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 20542803 - 20542921
Alignment:
Q  62 tcctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||| | ||| ||||||||||||| ||||||  |||| |||||||||||| || ||||||   |||| |||| || ||||||||||| |||||||    
T  20542803 tcctccatttttaattataagtaaattttgattttt--agattcattcaattaatgatgtatgtgggttataatatagaccacatacatcattaattgaa 20542900  T
Q  162 agaaattaaaatgttaaaattt 183  Q
     ||| |||||| ||||||||||    
T  20542901 tgaacttaaaa-gttaaaattt 20542921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 24331441 - 24331519
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||| |||||||| |||||  |||| ||||||||||||||| ||||| ||||||||||| ||| ||||||||||| ||||    
T  24331441 ataagcaaattttatttttt--agattcattcaattaataatgtatgtaatctatattatgaaccacatacatcattaatt 24331519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 42184774 - 42184692
Alignment:
Q  67 cattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatc 151  Q
    |||||| ||| |||| ||||||| ||||||| ||||| ||||||||||||||| |||||||| |||| ||||||| |||||||||    
T  42184774 cattgttaattataaataaattt-aattttt-tagattcattcaattaataatgtatgtgatttataatataaaccacatacatc 42184692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 24275233 - 24275344
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    ||||| ||||||||| ||||  |||| |||||||||||| || ||| || |||| |||||| || ||||||||||| ||||||| ||| ||||||  |||    
T  24275233 ataagcaaattttaactttt--agattcattcaattaattatgtatatggtctacattatagaccacatacatcattaattgaatgaatttaaaa-atta 24275329  T
Q  178 aaatttacttgtaat 192  Q
    |||||||||| ||||    
T  24275330 aaatttacttataat 24275344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 23329494 - 23329388
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    |||||||||||||| |||||  || | |||||||||| | || |||||| || ||||||||||| ||||||||||| ||||||| |||  ||||| | ||    
T  23329494 ataagtaaattttacttttt--aggttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaag-ta 23329398  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  23329397 aaatttactt 23329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 29978533 - 29978614
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| ||||||| |||||| ||| | ||||||||||||    
T  29978533 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaaatttaaa-gataaaatttactt 29978614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 34827489 - 34827569
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| ||||   || | ||||||||||||||| |||||| || |||| |||||| ||||||||||| |||||||    
T  34827489 ataagtaaattttactttt---aggttcattcaattaataatatatgtggtcaatatcataaaccacatacatcattaattgaa 34827569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 40952574 - 40952647
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||| |||||||||||| || |||||  |||||| |||||||||||||||| || ||||||| ||| ||||||    
T  40952574 tagattcattcaattaatgatgtatgtagtctataatataaactacatacattattaattgaatgaacttaaaa 40952647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 42013272 - 42013164
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    |||| ||||||||| ||||| ||| |  ||||||||||| || |||||| | |||| |||| || ||||||||||| ||||||| ||| |||||| | ||    
T  42013272 ataattaaattttattttttttaggtttattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaatttaaaaag-ta 42013174  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  42013173 aaatttactt 42013164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 13743874 - 13743955
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||| ||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  13743874 ataagcaaattttacttttt--agattcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 13743955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 17028332 - 17028276
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||||||||| ||||| |||||||    
T  17028332 cattcaattaatgatgtatgtggtccatattataaactacatatatcattaattgaa 17028276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 20542902 - 20542846
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||||||||| | ||||||||||| |||||||    
T  20542902 cattcaattaatgatgtatgtggtctatattataacccacatacatcattaattgaa 20542846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 40952638 - 40952582
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||||||||| |||||  | ||||||||| |||||||||||||| |||||||    
T  40952638 cattcaattaataatgtatgtagtttatattatagactacatacatcattaattgaa 40952582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 43635852 - 43635933
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| |  ||||||| ||||||||||||||| |||||||    
T  43635852 ataagaaaattttacttttt--agattcattcaattaatgatgtatgtggttcatattatgaactacatacatcattaattgaa 43635933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 49745587 - 49745506
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  || |||||| ||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  49745587 ataagcaaattttatttttt--aggtccatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 49745506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 50038574 - 50038493
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || ||||| ||| ||||||| ||| ||||||||||| |||||||    
T  50038574 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaa 50038493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 50045796 - 50045715
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || ||||| ||| ||||||| ||| ||||||||||| |||||||    
T  50045796 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaa 50045715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 51126146 - 51126202
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| ||||||||||| || ||||||||||| |||||||    
T  51126146 cattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaa 51126202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 3517160 - 3517106
Alignment:
Q  107 ttcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||| || ||||||||||||||||| ||| |||| |||||| |||||||    
T  3517160 ttcaattaatgatgtatgtgatctatattatgaaccacatgcatcattaattgaa 3517106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 39294214 - 39294288
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaa 179  Q
    |||||||||||| || |||||| || ||| ||| |||| |||||||||| ||||||| ||| |||||| ||||||    
T  39294214 cattcaattaatgatatatgtggtccataatatgaactgcatacatcattaattgaatgaacttaaaaagttaaa 39294288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 53403100 - 53403034
Alignment:
Q  95 tttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||| |||| ||||||| || || |||||| ||| ||||||| ||||||||||| |||||||    
T  53403100 tttctagattcatttaattaatgatgtacgtgatccataatataaaccacatacatcattaattgaa 53403034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 20541109 - 20541167
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattata 138  Q
    |||||||||||||||||||  ||| | |||||||| |||||| |||||||| |||||||||    
T  20541109 ataagtaaattttaatttt--taggttcattcaatcaataatatatgtgatttatattata 20541167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 48806361 - 48806268
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttacttgtaat 192  Q
    ||||| |||||||| |||||| |||||| ||| || |||| ||  ||||||||||  ||||||  || ||||||||||||| ||||||| ||||    
T  48806361 tagattcattcaataaataatatatgtggtctttaatatagaccgcatacatcatttattgaataaacttaaaatgttaaattttacttataat 48806268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 11583748 - 11583804
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||| ||| ||||||||||||||| |||||||    
T  11583748 cattcaattaatgatgtatgtggtccataatatgaactacatacatcattaattgaa 11583804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 11844042 - 11843954
Alignment:
Q  121 tatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttacttgtaatcgacaacataggaagta 209  Q
    |||||||| |||||||| ||| | ||| |||||  |||||| ||| |||||| || ||||||||||| |||| ||||||| ||| ||||    
T  11844042 tatgtgatttatattatgaaccagatatatcattgattgaatgaatttaaaaagtcaaaatttacttataatggacaacagagggagta 11843954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 23710876 - 23710932
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||| | || |||||| || ||||||||||| ||||||||||| |||||||    
T  23710876 cattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaa 23710932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 23754291 - 23754235
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| ||  |||||||||| ||||||||||| |||||||    
T  23754291 cattcaattaatgatatatgtggtccgtattataaaccacatacatcattaattgaa 23754235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 24529672 - 24529616
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  24529672 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 24529616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 25856109 - 25856061
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| || |||||| |||||||||| ||| |||||||||||    
T  25856109 cattcaattaatgatgtatgtggtctatattatgaaccacatacatcat 25856061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 32112413 - 32112357
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  32112413 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 32112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 48042632 - 48042688
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| ||||||| || |||||| |||||| ||| ||||||||||||||| |||||||    
T  48042632 catttaattaatgatgtatgtggtctataatatgaactacatacatcattaattgaa 48042688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 50519303 - 50519359
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  50519303 cattcaattaattatgtatgtggtctataatatgaaccacatacatcattaattgaa 50519359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 51126204 - 51126148
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| |||| || ||||||||||| |||||||    
T  51126204 cattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaa 51126148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 54675369 - 54675313
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||||||||| ||||||||  ||| ||||||| |||||||| || |||||||    
T  54675369 cattcaattaataatatatgtgattcataatataaaccacatacattattaattgaa 54675313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 55131635 - 55131579
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||| ||||||| ||||||||||| |||||||    
T  55131635 cattcaattaattatgtatgtgctccataatataaacaacatacatcattaattgaa 55131579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 3198055 - 3197975
Alignment:
Q  107 ttcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||| |||||| |||||| |||||| ||| |||||||||||||||  |||||| ||| ||||||||| |||||||||||    
T  3198055 ttcaataaataatgtatgtggtctataatatgaactacatacatcatgtattgaatgaatttaaaatgtaaaaatttactt 3197975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 921851 - 921924
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||| |||||||||||| || |||||||||||||||||  |||| ||||||||| ||||||| ||| ||||||    
T  921851 tagattcattcaattaatgatgtatgtgatctatattatggactagatacatcattaattgaatgaacttaaaa 921924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 9071304 - 9071248
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||||||||||| |||||| | ||||||||| |||||||||||||| |||||||    
T  9071304 cattcaattaataatgtatgtggtttatattatagactacatacatcattaattgaa 9071248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 10041641 - 10041571
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgt 175  Q
    |||||||||||| || |||||| |||||||||||||| ||||||||||| |||| || |||  ||||||||    
T  10041641 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgt 10041571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 10099651 - 10099581
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgt 175  Q
    |||||||||||| || |||||| |||||||||||||| ||||||||||| |||| || |||  ||||||||    
T  10099651 cattcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaacctaaaatgt 10099581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 29771753 - 29771815
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||||||| || ||||||||| ||||||| ||| ||||||||||| |||||||    
T  29771753 tagattcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaa 29771815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 25668452 - 25668505
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    |||||||||||| || ||||||||| ||||||||||| ||||||||||| ||||    
T  25668452 cattcaattaatgatgtatgtgatccatattataaaccacatacatcattaatt 25668505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 4637048 - 4637104
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||| |||||| |||||| |||||| ||||||| ||||||||||| |||||||    
T  4637048 cattcaatcaataatgtatgtggtctataatataaaccacatacatcattaattgaa 4637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 38721482 - 38721426
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||||||||||| |  |||||||| || ||||||||||| |||||||    
T  38721482 cattcaattaataatttatgtggttcatattatagaccacatacatcattaattgaa 38721426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 324879 - 324828
Alignment:
Q  121 tatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||| || ||||||||||||||||||||||| ||||||| ||| ||||||    
T  324879 tatgtggtccatattataaactacatacatcattaattgaatgaacttaaaa 324828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 26269324 - 26269379
Alignment:
Q  95 tttctagatccattcaattaataatttatgtgatctatattataaactacatacat 150  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||| ||||||||    
T  26269324 tttctaggttcattcaataaataatgtatgtgatccatattataaaccacatacat 26269379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 31211211 - 31211285
Alignment:
Q  61 ctcctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatatta 136  Q
    ||||||| |||| ||| |||| |||||||| || ||| ||||| ||||||||||||||| ||| ||||||||||||    
T  31211211 ctcctccgttgttaattataaataaattttgatattt-tagattcattcaattaataatgtatctgatctatatta 31211285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 43514855 - 43514788
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||||||||| || ||| || |||||||||| ||| ||||||||||| ||||||| ||| ||||||    
T  43514855 cattcaattaatgatgtatatggtctatattatgaaccacatacatcattaattgaatgaacttaaaa 43514788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 30905181 - 30905246
Alignment:
Q  121 tatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttactt 187  Q
    |||||| || ||||||||||| ||||||||||| ||||||| ||| |||||| | ||||||||||||    
T  30905181 tatgtggtccatattataaaccacatacatcattaattgaatgaacttaaaaag-taaaatttactt 30905246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 31175080 - 31175153
Alignment:
Q  62 tcctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatatta 136  Q
    |||||| |||| ||| ||||||||||||| || ||| ||||| |||||||||||| || ||| ||||||||||||    
T  31175080 tcctccgttgttaattataagtaaatttttatattt-tagattcattcaattaatgatgtatctgatctatatta 31175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 42579170 - 42579051
Alignment:
Q  52 taattgttactcc-tccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacat 150  Q
    ||||||||||||| |||||| | ||  |||||||||||||| |||||  |||| |||||||||||| || |||||| |  ||| |||  |||||||||||    
T  42579170 taattgttactccctccatttttaaatataagtaaattttacttttt--agattcattcaattaatgatgtatgtggttcataatatggactacatacat 42579073  T
Q  151 cataaattgaaagaaattaaaa 172  Q
    ||| |||| || ||| ||||||    
T  42579072 cattaattaaatgaatttaaaa 42579051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 9071240 - 9071313
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||| |||||||||||| || |||||  |||||| ||||||| |||||||| || ||||||| ||| ||||||    
T  9071240 tagattcattcaattaatgatgtatgtagtctataatataaaccacatacattattaattgaatgaacttaaaa 9071313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 31596813 - 31596884
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatc 151  Q
    |||||||||||| ||||||| || || |||||||||||| || ||||||||| ||||||| ||| |||||||||    
T  31596813 ataagtaaattt-aattttt-tatattcattcaattaatgatgtatgtgatccatattatgaacgacatacatc 31596884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4898264 - 4898208
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||  ||||||||||| |||||||    
T  4898264 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 4898208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4945658 - 4945602
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||  ||||||||||| |||||||    
T  4945658 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 4945602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 5144367 - 5144311
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| ||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  5144367 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 5144311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 8554687 - 8554768
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||| ||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  8554687 ataagcaaattttacttttt--agattcatttaattaatgatatatgtggtccatattatgaaccacatacatcattaattgaa 8554768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 9709757 - 9709701
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||| |||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  9709757 cattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 9709701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 17844050 - 17843994
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||| | ||||||||| |||||||    
T  17844050 cattcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaa 17843994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 20195305 - 20195386
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  |||| |||||||||||| || ||||||||  ||| |||  || ||||||||||| |||||||    
T  20195305 ataagtaaattttacttttt--agattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaa 20195386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 24971221 - 24971302
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| ||||||| |||| || |||||| || |||||||  |||||||||||||| |||||||    
T  24971221 ataagcaaattttacttttt--agattcattcaactaatgatgtatgtggtccatattatggactacatacatcattaattgaa 24971302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 30202525 - 30202581
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||| ||| || ||||||||  |||||||| |||||||||||||| |||||||    
T  30202525 cattcaatcaatgatgtatgtgattcatattatagactacatacatcattaattgaa 30202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 34911197 - 34911141
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  34911197 cattcaattaatgatgtatgtggtcgatattatgaaccacatacatcattaattgaa 34911141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 40340568 - 40340520
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| || |||||| || ||||||||||| |||||||||||    
T  40340568 cattcaattaatgatgtatgtggtccatattataaaccacatacatcat 40340520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 45123919 - 45123838
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | ||||||||||||||| |||||| | |||| |||  |||||||||||||  |||||||    
T  45123919 ataagtaaattttacttttt--aggttcattcaattaataatgtatgtggtttataatatggactacatacatcaataattgaa 45123838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 8426736 - 8426851
Alignment:
Q  71 gtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaa 170  Q
    |||||| |||||||||||||||||||| ||  | | || ||||||| || ||||||||||||||||| ||| | ||||||||| |||| || |||  |||    
T  8426736 gtcaattataagtaaattttaattttt-tacgttcttttaattaattatgtatgtgatctatattatgaaccaaatacatcattaattaaatgaatctaa 8426834  T
Q  171 aatgttaaaatttactt 187  Q
    || ||||||||||||||    
T  8426835 aaagttaaaatttactt 8426851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 15278606 - 15278662
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||| ||||| || ||||||||||||||||||||| ||||||||||| |||||||    
T  15278606 cattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaa 15278662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 31909790 - 31909846
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||||||||||| ||||||||||| |||||||    
T  31909790 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaa 31909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 24478706 - 24478773
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||||||||||| || |||||| |||||||||||||| ||||||||||| |||| || ||| ||||||    
T  24478706 cattcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaacttaaaa 24478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 35049932 - 35050040
Alignment:
Q  62 tcctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||| || ||||| ||||||||||||| | ||||  || | |||||||||||| || ||||||||||||||||||||  | ||| ||||| |||||||    
T  35049932 tcctccgttttcaattataagtaaattttgactttt--aggttcattcaattaatgatgtatgtgatctatattataaatcatatatatcattaattgaa 35050029  T
Q  162 agaaattaaaa 172  Q
     |||| |||||    
T  35050030 tgaaactaaaa 35050040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 38824396 - 38824334
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||||||| || |||||| |||||||||| ||| ||||||||||| |||||||    
T  38824396 tagattcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaa 38824334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 13145863 - 13145799
Alignment:
Q  72 tcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattat 137  Q
    ||||| ||||||||||||||| ||||  || || |||||||||||||| |||||||||||||||||    
T  13145863 tcaattataagtaaattttaagtttttaagttc-attcaattaataatgtatgtgatctatattat 13145799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 42629586 - 42629682
Alignment:
Q  64 ctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| |||||||| ||||| ||||||| ||||| |||||| |||| ||||| |||| ||| | |||||||||||| || |||||| |||| |||||||    
T  42629586 ctccgttgtcaattataagcaaattttgatttt-ctagattcattgaattattaatgtatataatctatattatagaccacatacgtcattaattgaa 42629682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 21909857 - 21909938
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || |  ||||||||||| || |||||| || ||||||| ||||||||||||||| |||||||    
T  21909857 ataagtaaattttacttttt--aggtttattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaa 21909938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 26059218 - 26059162
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| ||||||||| || ||||||||||| | ||||||||| |||||||    
T  26059218 cattcaattaatgatttatgtggtccatattataaaccatatacatcattaattgaa 26059162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 37255142 - 37255223
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  37255142 ataagcaaattttacttttt--agattcattcaattaatgatgtatgtggtccatattattaaccacatacatcattaattgaa 37255223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 17310517 - 17310430
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttacttgtaat 192  Q
    |||||||||||| || ||| |||| | ||||||| || | ||||||||| ||||||| ||| |||||| |||||||||| ||| ||||    
T  17310517 cattcaattaatgatatatatgatttgtattatagaccatatacatcattaattgaatgaacttaaaaagttaaaatttgcttataat 17310430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 2492581 - 2492527
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||||| ||| || ||| |||||| |||||||||| |||||||||||    
T  2492581 tagatccattcaataaatgatgtatatgatctttattataaaccacatacatcat 2492527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 42788363 - 42788417
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| ||||| || ||||||||| ||||||| ||| |||||||||||    
T  42788363 tagatccattcatttaatgatgtatgtgatccatattatgaaccacatacatcat 42788417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 48376910 - 48376856
Alignment:
Q  99 tagatccattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    ||||| ||||||||||||||| |||||| ||  || |||||||||||||||||||    
T  48376910 tagattcattcaattaataatatatgtggtccttaatataaactacatacatcat 48376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 52132840 - 52132890
Alignment:
Q  108 tcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||||||| ||  |||||||| ||||||||||||||||||||||| ||||    
T  52132840 tcaattaattatgcatgtgatccatattataaactacatacatcattaatt 52132890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4683036 - 4682980
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  4683036 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 4682980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 5852787 - 5852731
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||| |||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  5852787 cattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 5852731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 8751473 - 8751529
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| | ||| |||||||| ||||||||||| |||||||    
T  8751473 cattcaattaatgatgtatgtggtttatgttataaaccacatacatcattaattgaa 8751529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 15311513 - 15311561
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||| ||||| || |||||| || |||||||||||||||||||||||    
T  15311513 cattcatttaatgatgtatgtggtccatattataaactacatacatcat 15311561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 25378356 - 25378300
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  25378356 cattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaattgaa 25378300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 27549086 - 27549142
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  27549086 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 27549142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 33738208 - 33738260
Alignment:
Q  109 caattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  33738208 caattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 33738260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 38847343 - 38847391
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||| ||||| || |||||| |||||||||||||| |||||||||||    
T  38847343 cattcatttaatgatgtatgtggtctatattataaaccacatacatcat 38847391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 39015604 - 39015660
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  39015604 cattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaattgaa 39015660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 43020396 - 43020459
Alignment:
Q  128 tctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttacttgtaat 192  Q
    ||||||||||| || ||||||||| | ||||||| ||| |||||| |||||||||||||| ||||    
T  43020396 tctatattatataccacatacatcgttaattgaatgaacttaaaa-gttaaaatttacttataat 43020459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 45239090 - 45239042
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| || |||||| |||||||||| ||| |||||||||||    
T  45239090 cattcaattaatgatgtatgtggtctatattatgaaccacatacatcat 45239042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 46517986 - 46518042
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||||| |||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  46517986 cattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 46518042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 47011285 - 47011341
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||  ||||||||||| |||||||    
T  47011285 cattcaattaatgatatatgtggtccatattataaatcacatacatcattaattgaa 47011341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 27942341 - 27942433
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||| |||||||| |||||  |||| |||||||||||| || ||| ||||| ||||||||||| ||||||||||| ||||||| ||| ||||||    
T  27942341 ataagcaaattttacttttt--agattcattcaattaatgatgtatatgatccatattataaaccacatacatcattaattgaatgaacttaaaa 27942433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 47778470 - 47778537
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||||||| ||||||| ||| ||||||    
T  47778470 cattcaattaataatgtatgtgatttatattatcgactacatacatcattaattgaatgaatttaaaa 47778537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 3498418 - 3498337
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  3498418 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 3498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 19531994 - 19532050
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || ||||||||||||||||||||||| |||||||    
T  19531994 cattcaattaatgatgtatgtggtccatattataaactacatacatcattaattgaa 19532050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 46477257 - 46477176
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||    
T  46477257 ataagtaaattttacttttt--aggttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 46477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 33471614 - 33471533
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  || | |||||||||||| || |||||| |||||| ||| ||| ||||||||||| |||||||    
T  33471614 ataagtaaattttatttttt--aggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 33471533  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 35593657 - 35593738
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||||| |||||  ||||  ||||||||||| || |||||| || ||||||| ||| ||||||||||| |||||||    
T  35593657 ataagtaaattttatttttt--agatttattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 35593738  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 46578306 - 46578362
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| | |||||||| ||||||||||||||| |||||||    
T  46578306 cattcaattaatgatgtatgtggtttatattatgaactacatacatcattaattgaa 46578362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 46658856 - 46658775
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| || ||||||| || |||||||||||| |||||||    
T  46658856 ataagcaaattttacttttt--agattcattcaattaatgatgtatgtgttccatattatgaattacatacatcattaattgaa 46658775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 27554527 - 27554594
Alignment:
Q  94 ttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| ||||| |||||||||||| || |||||||||| ||||||| |  ||||||||||| |||||||    
T  27554527 ttttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaa 27554594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 46221177 - 46221110
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaa 172  Q
    |||| ||||||| || |||||| || ||||||||||| ||||||||||| ||||||| ||| ||||||    
T  46221177 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacttaaaa 46221110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 17882832 - 17882726
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgtta 177  Q
    |||||||||||||| ||||  |||||  |||| ||||||||| |||||| || ||||||||||  |||| |||||| |||| || ||| |||||| | ||    
T  17882832 ataagtaaattttactttt--tagatttattcgattaataatgtatgtggtccatattataaatcacatgcatcattaattaaatgaacttaaaaag-ta 17882736  T
Q  178 aaatttactt 187  Q
    ||||||||||    
T  17882735 aaatttactt 17882726  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 18819974 - 18820059
Alignment:
Q  107 ttcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgttaaaatttacttgtaat 192  Q
    |||||| ||| || ||||| |||| || |||| || |||||||||||  |||||| |||  |||||||||||| ||||||||||||    
T  18819974 ttcaataaatgatatatgtaatctttaatatagacaacatacatcatttattgaatgaatctaaaatgttaaattttacttgtaat 18820059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 1565511 - 1565455
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| |  ||||||||| ||||||| ||| ||||||||||| |||||||    
T  1565511 cattcaattaatgaagtatgtgatccatattatgaaccacatacatcattaattgaa 1565455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 12171753 - 12171705
Alignment:
Q  110 aattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    ||||||| || ||| ||||| ||||||||||||||||||||||| ||||    
T  12171753 aattaatgatgtatatgatccatattataaactacatacatcattaatt 12171705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 19197852 - 19197765
Alignment:
Q  62 tcctccattgtcaatgataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacat 150  Q
    ||||||||||| ||| ||||  ||||||| ||||| |||| | |||||||||||  || |||||| ||||||||||| || ||||||||    
T  19197852 tcctccattgttaattataatcaaattttgatttt-ctaggttcattcaattaacgatgtatgtggtctatattatagaccacatacat 19197765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 27940844 - 27940788
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||| ||||||| || ||||||||| ||||||| ||| ||||||||||| |||||||    
T  27940844 cattgaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaa 27940788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 31319557 - 31319605
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| || |||||| ||| ||||||| ||||||||||||||    
T  31319557 cattcaattaatgatatatgtggtctttattatagactacatacatcat 31319605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 31758525 - 31758577
Alignment:
Q  106 attcaattaataatttatgtgatctatattataaactacatacatcataaatt 158  Q
    |||||||||||||| |||||||| |||||||| ||  ||||||||||| ||||    
T  31758525 attcaattaataatatatgtgatttatattatgaatcacatacatcattaatt 31758577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 33471506 - 33471587
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || |||||| |  |||||||| || ||||||||||| |||||||    
T  33471506 ataagcaaattttatttttt--agattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 33471587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 37066223 - 37066279
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| ||||||||||  || ||||||||||| |||||||    
T  37066223 cattcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaa 37066279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 14049 - 14130
Alignment:
Q  78 ataagtaaattttaatttttctagatccattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    ||||| |||||||| |||||  |||| |||||||||||| || ||| || |||||||||||||||||||| ||||| |||||||    
T  14049 ataagcaaattttacttttt--agattcattcaattaatgatgtatatggtctatattataaactacatagatcattaattgaa 14130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 5429 - 5499
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaaagaaattaaaatgt 175  Q
    |||||||||||| || |||||| |||||||||||||| ||||||||||| |||| || |||  ||||||||    
T  5429 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgt 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 609 - 562
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatca 152  Q
    |||||||||||| || ||||||||| ||||||||||| ||||||||||    
T  609 cattcaattaatgatgtatgtgatcaatattataaaccacatacatca 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 11625 - 11681
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcataaattgaa 161  Q
    |||||||||||| || |||||| || |||||||| || ||||||||||| |||||||    
T  11625 cattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaa 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 17475 - 17523
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||| ||||| || |||||| |||||||||||||| |||||||||||    
T  17475 cattcatttaatgatgtatgtggtctatattataaaccacatacatcat 17523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 38106 - 38058
Alignment:
Q  105 cattcaattaataatttatgtgatctatattataaactacatacatcat 153  Q
    |||||||||||| || |||||| |||||||||| ||| |||||||||||    
T  38106 cattcaattaatgatgtatgtggtctatattatgaaccacatacatcat 38058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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