View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5811_low_58 (Length: 261)
Name: NF5811_low_58
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5811_low_58 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 36775728 - 36775496
Alignment:
| Q |
19 |
attagatttcaggttactcaatatggtgaagaacttcctgagagagttgggcaacctgattgtgaggtatgcttatttttggtaactacaaatgtatttg |
118 |
Q |
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| T |
36775728 |
attagatttcaggttactcaatatggtgaagaacttcctgagagagttgggcaacctgattgtgaggtatgcttatttttggtaactacaaatgtatttg |
36775629 |
T |
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| Q |
119 |
ttgtcatttttctttccctcgttttgaacggtgcttcatgaaaccgaatgtggacgttgtttgtgcaagaactttaagagtgaattcaagaataggcctt |
218 |
Q |
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| T |
36775628 |
ttgtcatttttctttccctcgttttgaacggtgcttcatgaaaccgaatgtggacgttgtttgtgcaagaactttaagagtgaattcaagaataggcctt |
36775529 |
T |
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| Q |
219 |
attttccttgaacaaattcactttttacctatg |
251 |
Q |
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| T |
36775528 |
attttccttgaacaaattcactttttacctatg |
36775496 |
T |
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