View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5811_low_91 (Length: 206)

Name: NF5811_low_91
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5811_low_91
NF5811_low_91
[»] chr6 (26 HSPs)
chr6 (16-124)||(8437588-8437696)
chr6 (18-124)||(4111402-4111508)
chr6 (16-124)||(12296942-12297050)
chr6 (16-124)||(13276560-13276668)
chr6 (16-124)||(28890924-28891032)
chr6 (18-124)||(3027302-3027408)
chr6 (16-124)||(3729068-3729176)
chr6 (16-124)||(5153316-5153424)
chr6 (18-125)||(24011935-24012037)
chr6 (16-121)||(31803132-31803237)
chr6 (25-124)||(1101188-1101287)
chr6 (16-106)||(27613293-27613383)
chr6 (36-118)||(479215-479297)
chr6 (54-124)||(24848888-24848958)
chr6 (25-124)||(32187309-32187408)
chr6 (64-124)||(13041759-13041819)
chr6 (16-124)||(3257125-3257222)
chr6 (64-124)||(1558606-1558666)
chr6 (68-124)||(4174286-4174342)
chr6 (64-111)||(4229895-4229942)
chr6 (58-124)||(11982481-11982547)
chr6 (57-127)||(33042779-33042849)
chr6 (88-125)||(7458725-7458762)
chr6 (25-106)||(34858146-34858227)
chr6 (39-106)||(17156242-17156309)
chr6 (16-52)||(23645900-23645936)
[»] chr7 (35 HSPs)
chr7 (16-124)||(14776199-14776307)
chr7 (16-126)||(3356958-3357068)
chr7 (18-126)||(2732288-2732396)
chr7 (18-124)||(11410521-11410627)
chr7 (16-124)||(15943135-15943243)
chr7 (16-124)||(41892123-41892231)
chr7 (18-124)||(34521262-34521368)
chr7 (16-124)||(1411538-1411646)
chr7 (16-124)||(18533380-18533483)
chr7 (16-125)||(41399727-41399835)
chr7 (25-124)||(10227858-10227957)
chr7 (25-124)||(23671171-23671270)
chr7 (16-106)||(31673556-31673646)
chr7 (25-118)||(12419178-12419271)
chr7 (25-122)||(43596200-43596297)
chr7 (69-125)||(12077200-12077256)
chr7 (25-125)||(41902863-41902963)
chr7 (16-76)||(48214111-48214171)
chr7 (68-126)||(2941197-2941255)
chr7 (58-124)||(31377365-31377431)
chr7 (26-124)||(44848016-44848114)
chr7 (25-118)||(13391060-13391153)
chr7 (64-125)||(21806499-21806560)
chr7 (13-118)||(34002787-34002892)
chr7 (64-124)||(2196044-2196104)
chr7 (16-101)||(8485925-8486010)
chr7 (64-124)||(15757709-15757769)
chr7 (16-124)||(24421915-24422023)
chr7 (69-124)||(36820936-36820991)
chr7 (69-124)||(37806989-37807044)
chr7 (16-98)||(31249410-31249492)
chr7 (129-169)||(20251649-20251689)
chr7 (64-124)||(27595700-27595760)
chr7 (13-121)||(33450261-33450369)
chr7 (16-52)||(37807030-37807066)
[»] chr3 (46 HSPs)
chr3 (16-124)||(40000797-40000905)
chr3 (18-125)||(19420961-19421068)
chr3 (18-124)||(39391050-39391156)
chr3 (16-124)||(24540994-24541102)
chr3 (16-124)||(28793648-28793756)
chr3 (18-124)||(29076864-29076970)
chr3 (16-124)||(1782702-1782810)
chr3 (16-124)||(33249412-33249520)
chr3 (16-124)||(34705327-34705435)
chr3 (16-124)||(47597102-47597210)
chr3 (17-124)||(13596161-13596268)
chr3 (16-124)||(20647813-20647921)
chr3 (25-124)||(26994786-26994885)
chr3 (16-111)||(34636350-34636445)
chr3 (16-124)||(33370415-33370518)
chr3 (16-124)||(52174823-52174926)
chr3 (54-124)||(33069479-33069549)
chr3 (16-126)||(40489063-40489173)
chr3 (25-126)||(39889319-39889420)
chr3 (16-93)||(25536867-25536944)
chr3 (16-125)||(54650445-54650549)
chr3 (25-125)||(4481648-4481748)
chr3 (16-124)||(34422684-34422787)
chr3 (16-93)||(47844526-47844603)
chr3 (58-126)||(4357082-4357150)
chr3 (25-124)||(9338287-9338386)
chr3 (16-102)||(46068008-46068094)
chr3 (16-102)||(55008113-55008199)
chr3 (64-124)||(41636283-41636343)
chr3 (25-125)||(51302360-51302460)
chr3 (16-93)||(53002186-53002263)
chr3 (39-106)||(41129762-41129829)
chr3 (39-106)||(46136403-46136470)
chr3 (16-106)||(2222100-2222190)
chr3 (64-125)||(22523398-22523459)
chr3 (85-126)||(33910154-33910195)
chr3 (63-124)||(43010299-43010360)
chr3 (64-124)||(7046801-7046861)
chr3 (64-124)||(54447581-54447641)
chr3 (64-115)||(26020420-26020471)
chr3 (64-118)||(25593737-25593791)
chr3 (25-106)||(24133774-24133855)
chr3 (16-60)||(39171435-39171479)
chr3 (64-106)||(42294127-42294169)
chr3 (58-118)||(14751810-14751870)
chr3 (16-60)||(46116481-46116525)
[»] chr2 (28 HSPs)
chr2 (16-124)||(13029122-13029230)
chr2 (16-124)||(21198152-21198260)
chr2 (16-127)||(32084130-32084241)
chr2 (16-124)||(40737800-40737908)
chr2 (18-124)||(34726343-34726449)
chr2 (16-124)||(12033841-12033948)
chr2 (16-137)||(17852767-17852887)
chr2 (36-124)||(36985416-36985504)
chr2 (16-124)||(29557415-29557523)
chr2 (17-126)||(43616303-43616412)
chr2 (16-124)||(5936787-5936890)
chr2 (38-124)||(6283332-6283418)
chr2 (39-124)||(35959329-35959414)
chr2 (16-101)||(38213419-38213504)
chr2 (16-124)||(7592559-7592662)
chr2 (25-124)||(2995068-2995167)
chr2 (25-124)||(26260291-26260390)
chr2 (64-126)||(38448096-38448158)
chr2 (16-93)||(43999649-43999726)
chr2 (64-124)||(2182783-2182843)
chr2 (64-124)||(29044105-29044165)
chr2 (64-116)||(6420021-6420073)
chr2 (64-124)||(29768290-29768350)
chr2 (25-125)||(44092833-44092933)
chr2 (16-102)||(18075797-18075878)
chr2 (64-117)||(31452946-31452999)
chr2 (64-124)||(6431516-6431576)
chr2 (16-122)||(39133235-39133336)
[»] chr5 (28 HSPs)
chr5 (16-126)||(12880456-12880567)
chr5 (16-124)||(9163428-9163536)
chr5 (16-124)||(4049457-4049565)
chr5 (16-124)||(31271449-31271557)
chr5 (16-126)||(6644173-6644283)
chr5 (16-124)||(7078990-7079098)
chr5 (16-124)||(42062322-42062430)
chr5 (36-127)||(491250-491341)
chr5 (16-121)||(4101180-4101285)
chr5 (16-124)||(7035162-7035270)
chr5 (16-124)||(42288518-42288621)
chr5 (16-124)||(10931618-10931726)
chr5 (39-126)||(10017761-10017848)
chr5 (25-124)||(40083983-40084082)
chr5 (25-126)||(18158376-18158477)
chr5 (65-124)||(38254693-38254752)
chr5 (39-124)||(14949563-14949648)
chr5 (64-124)||(11877462-11877522)
chr5 (13-124)||(27332510-27332621)
chr5 (64-118)||(15397563-15397617)
chr5 (26-116)||(370164-370254)
chr5 (64-116)||(18295192-18295244)
chr5 (25-101)||(36113148-36113224)
chr5 (78-124)||(14084526-14084572)
chr5 (64-106)||(17870105-17870147)
chr5 (54-124)||(32298667-32298731)
chr5 (39-101)||(34855338-34855400)
chr5 (63-124)||(858635-858696)
[»] chr4 (40 HSPs)
chr4 (18-124)||(40730456-40730562)
chr4 (18-124)||(48826000-48826106)
chr4 (16-124)||(8753803-8753911)
chr4 (18-124)||(38308091-38308197)
chr4 (16-124)||(37011001-37011108)
chr4 (16-124)||(48089808-48089916)
chr4 (18-124)||(10010886-10010992)
chr4 (18-124)||(10018027-10018133)
chr4 (11-125)||(52225656-52225770)
chr4 (36-124)||(11845391-11845479)
chr4 (18-106)||(47691596-47691684)
chr4 (16-124)||(48801253-48801356)
chr4 (16-124)||(41487454-41487557)
chr4 (16-123)||(7363552-7363658)
chr4 (25-124)||(48659320-48659419)
chr4 (16-101)||(20039671-20039756)
chr4 (16-124)||(9627486-9627594)
chr4 (16-108)||(38973598-38973690)
chr4 (16-124)||(41324430-41324532)
chr4 (18-125)||(16711742-16711849)
chr4 (58-124)||(4422060-4422126)
chr4 (25-124)||(17981324-17981423)
chr4 (25-124)||(29590496-29590595)
chr4 (63-124)||(32468336-32468397)
chr4 (64-124)||(3097928-3097988)
chr4 (64-124)||(36488771-36488831)
chr4 (22-124)||(31842846-31842948)
chr4 (25-124)||(12582099-12582198)
chr4 (25-128)||(50637205-50637308)
chr4 (16-126)||(8672742-8672847)
chr4 (69-126)||(32212215-32212272)
chr4 (64-124)||(517548-517608)
chr4 (68-124)||(5258756-5258812)
chr4 (69-124)||(40412838-40412893)
chr4 (39-125)||(46903932-46904018)
chr4 (39-118)||(35041816-35041896)
chr4 (32-114)||(20392957-20393040)
chr4 (13-52)||(32212258-32212297)
chr4 (66-124)||(25040254-25040312)
chr4 (97-125)||(49389993-49390021)
[»] scaffold0037 (1 HSPs)
scaffold0037 (18-124)||(81358-81464)
[»] chr1 (50 HSPs)
chr1 (18-124)||(39860480-39860586)
chr1 (16-124)||(17805813-17805921)
chr1 (16-124)||(19708989-19709097)
chr1 (16-124)||(34083969-34084077)
chr1 (16-124)||(52222725-52222833)
chr1 (16-126)||(8417225-8417335)
chr1 (18-124)||(18353088-18353194)
chr1 (16-126)||(33785192-33785302)
chr1 (16-124)||(6889525-6889633)
chr1 (16-124)||(6891371-6891479)
chr1 (16-128)||(24038237-24038349)
chr1 (16-124)||(18437100-18437208)
chr1 (16-124)||(18447957-18448065)
chr1 (16-124)||(18453050-18453158)
chr1 (16-124)||(2988656-2988764)
chr1 (25-124)||(42650061-42650160)
chr1 (16-101)||(46846781-46846866)
chr1 (16-124)||(31493458-31493561)
chr1 (16-124)||(50097058-50097166)
chr1 (17-124)||(32239305-32239412)
chr1 (25-124)||(39919604-39919703)
chr1 (16-101)||(7109599-7109684)
chr1 (39-124)||(10805017-10805102)
chr1 (16-101)||(13253267-13253352)
chr1 (16-124)||(44969032-44969135)
chr1 (41-124)||(15321939-15322022)
chr1 (38-124)||(6305024-6305110)
chr1 (63-128)||(23555741-23555806)
chr1 (64-124)||(5500024-5500084)
chr1 (25-125)||(13077293-13077393)
chr1 (17-124)||(13884592-13884700)
chr1 (32-123)||(15849814-15849905)
chr1 (25-124)||(19507057-19507156)
chr1 (25-124)||(44912597-44912696)
chr1 (39-124)||(34050048-34050133)
chr1 (37-101)||(3831534-3831598)
chr1 (25-125)||(12298133-12298233)
chr1 (25-125)||(18342557-18342657)
chr1 (26-93)||(6889023-6889090)
chr1 (86-124)||(295432-295470)
chr1 (39-124)||(10311990-10312075)
chr1 (64-124)||(16452385-16452445)
chr1 (64-124)||(16461537-16461597)
chr1 (64-123)||(44779541-44779600)
chr1 (64-106)||(27090885-27090927)
chr1 (25-106)||(42384218-42384299)
chr1 (38-120)||(45372786-45372865)
chr1 (64-107)||(17386374-17386417)
chr1 (25-124)||(26257390-26257489)
chr1 (25-124)||(38672157-38672256)
[»] scaffold0129 (1 HSPs)
scaffold0129 (16-125)||(40899-41008)
[»] chr8 (32 HSPs)
chr8 (16-124)||(7323207-7323315)
chr8 (16-120)||(23950292-23950396)
chr8 (16-124)||(26241267-26241375)
chr8 (18-124)||(36684672-36684778)
chr8 (18-126)||(11989027-11989135)
chr8 (16-124)||(36054659-36054767)
chr8 (16-124)||(10921068-10921176)
chr8 (26-124)||(32551599-32551697)
chr8 (25-124)||(33303806-33303906)
chr8 (18-124)||(12615125-12615226)
chr8 (25-125)||(35056178-35056278)
chr8 (25-124)||(24580441-24580540)
chr8 (42-124)||(38600869-38600951)
chr8 (64-124)||(16365045-16365105)
chr8 (25-124)||(14921366-14921465)
chr8 (64-126)||(44755542-44755604)
chr8 (25-126)||(40680347-40680448)
chr8 (69-124)||(16383970-16384025)
chr8 (16-101)||(10954362-10954447)
chr8 (16-101)||(10962367-10962452)
chr8 (63-124)||(26106378-26106439)
chr8 (64-124)||(7383235-7383295)
chr8 (64-124)||(39506693-39506753)
chr8 (63-124)||(7960623-7960684)
chr8 (63-124)||(12637985-12638046)
chr8 (69-126)||(32415404-32415461)
chr8 (16-124)||(31519144-31519247)
chr8 (64-124)||(32983265-32983325)
chr8 (64-124)||(44710077-44710137)
chr8 (36-124)||(36918609-36918697)
chr8 (85-124)||(30577038-30577077)
chr8 (16-52)||(16383948-16383984)
[»] scaffold0067 (1 HSPs)
scaffold0067 (16-125)||(14355-14464)
[»] scaffold0065 (1 HSPs)
scaffold0065 (16-126)||(39972-40082)
[»] scaffold0886 (1 HSPs)
scaffold0886 (25-101)||(1812-1888)
[»] scaffold0275 (1 HSPs)
scaffold0275 (25-124)||(9151-9250)
[»] scaffold1625 (1 HSPs)
scaffold1625 (19-124)||(1216-1316)
[»] scaffold0217 (2 HSPs)
scaffold0217 (85-125)||(15338-15378)
scaffold0217 (16-61)||(15628-15673)
[»] scaffold0422 (1 HSPs)
scaffold0422 (70-124)||(10638-10692)
[»] scaffold1702 (1 HSPs)
scaffold1702 (72-124)||(1-53)
[»] scaffold0259 (2 HSPs)
scaffold0259 (16-52)||(24849-24885)
scaffold0259 (69-124)||(24808-24863)


Alignment Details
Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8437588 - 8437696
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  8437588 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccagactcaggcctatcaaagtctggcctggcctggcctattc 8437687  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  8437688 ccaacccta 8437696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 4111402 - 4111508
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||||||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  4111402 aataggcctatgaaaggtcataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 4111501  T
Q  118 aacccta 124  Q
    |||||||    
T  4111502 aacccta 4111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12296942 - 12297050
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||| ||| |||||||| |||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  12296942 aaaataggcctatgaaaggccataggccaggcttaggcctgcaaattttttcgtaggccagactcagacctatcaaagtctggcctggcctggcctattc 12297041  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  12297042 ccaacccta 12297050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 13276668 - 13276560
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  13276668 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 13276569  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  13276568 ccaacccta 13276560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 28890924 - 28891032
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  28890924 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 28891023  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  28891024 ccaacccta 28891032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 3027302 - 3027408
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  3027302 aataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 3027401  T
Q  118 aacccta 124  Q
    |||||||    
T  3027402 aacccta 3027408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 3729068 - 3729176
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||| | | ||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  3729068 aaaataggcctatgaaatgccgtaggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 3729167  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  3729168 ccaacccta 3729176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 5153424 - 5153316
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||| | |||||||  |||||||||||||| |||||   |||||||| |||||||||||||||||||||    
T  5153424 aaaataggcctatgaaaggccataggccaggctcaagcctgcaaaatttttcgtaggccaggctcagacttatcaaagcctggcctggcctggcctattc 5153325  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  5153324 ccaacccta 5153316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 24012037 - 24011935
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| |||||||||||||| || |||||||| |||||||||||||| |||||| |||||||||     |||||||||||||||||||    
T  24012037 aataggcctatgaaaggccataggccaggctcgggcctgcaaattttttcgtaggccaggctcaggcctatcaaag-----cctggcctggcctattccc 24011943  T
Q  118 aaccctag 125  Q
    ||||||||    
T  24011942 aaccctag 24011935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 31803132 - 31803237
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||  |||||||| |||||||||| ||| |||| ||||||||||| ||| ||||| ||| |||||||    
T  31803132 aaaataggcctatgaaaggccataggccaggctcagacctgcaaattttttcgtaggtcaggctcaagtctatcaaagcctgacctggtctgacctattc 31803231  T
Q  116 ccaacc 121  Q
    ||||||    
T  31803232 ccaacc 31803237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 1101287 - 1101188
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  1101287 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 1101188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 27613383 - 27613293
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||| ||| |||||| |||||||||  || ||||||||    
T  27613383 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggtcaggctcaggcctatcaaagcttgacctggcct 27613293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 479215 - 479297
Alignment:
Q  36 cataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    |||||||||| |||||| ||| |||| |||||||||||||| |||||| ||||||||| |||| |||||||| ||||||||||    
T  479215 cataggccagactcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagcctggtctggcctgacctattccca 479297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 24848958 - 24848888
Alignment:
Q  54 ctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||  |||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||    
T  24848958 ctgcaaaatttttcgtaggccagactcaggcctatcaaagtctggcctcgcctggcctatttccaacccta 24848888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 32187309 - 32187408
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| |||||||||  ||||||||||||||||||||||| |||||    
T  32187309 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcatggcctggcctggcctattcccaccccta 32187408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 13041759 - 13041819
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| || ||||||||||||||||||||| |||||    
T  13041759 tttcgtaggccagactcaggcctatcaaagcctagcctggcctggcctattcccaccccta 13041819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 3257222 - 3257125
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   |||||||||||||            ||||| |||||||||||||||||||||    
T  3257222 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccag-----------gcaaagcctggcctggcctggcctattc 3257134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 1558666 - 1558606
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||| |||||||||| |||||    
T  1558666 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctgacctattcccaccccta 1558606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 4174286 - 4174342
Alignment:
Q  68 gtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||| |||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  4174286 gtaggccaggctcaggcctatcaaagcctggcatggcctggcctattcccaccccta 4174342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 4229895 - 4229942
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcct 111  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  4229895 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcct 4229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 11982481 - 11982547
Alignment:
Q  58 aaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||| |||||||| | ||| |||||  |||| ||||||||||||||||||||||||||||| |||||    
T  11982481 aaattttttcgtaagtcaggctcagacctattaaagtctggcctggcctggcctattcccaccccta 11982547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 33042849 - 33042779
Alignment:
Q  57 caaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagtg 127  Q
    ||||| |||||||||| ||| |||||| ||||||||  ||||  |||||||||||||||||| ||||||||    
T  33042849 caaattttttcgtaggtcaggctcaggcctatcaaaacctggtttggcctggcctattcccatccctagtg 33042779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 7458762 - 7458725
Alignment:
Q  88 tcaaagtctggcctggcctggcctattcccaaccctag 125  Q
    |||||||||||||||||||| |||||||||||||||||    
T  7458762 tcaaagtctggcctggcctgacctattcccaaccctag 7458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 34858227 - 34858146
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||| ||| |||||||||||||||||  ||  | | |||||||||||||| |||||  ||||||||| ||||||||||||    
T  34858227 ctatgataggccataggccaggctcaggcttgtgatttttttcgtaggccaggctcagacctatcaaagcctggcctggcct 34858146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 17156309 - 17156242
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    ||||||| ||||||  || |||| |||||||||||||| |||||| ||||||||  ||||||||||||    
T  17156309 aggccagactcaggcttgtaaattttttcgtaggccaggctcaggcctatcaaaacctggcctggcct 17156242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 23645936 - 23645900
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcagg 52  Q
    |||||||| |||||||||| |||||||||||||||||    
T  23645936 aaaataggcctatgaaaggccataggccaggctcagg 23645900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 14776199 - 14776307
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  14776199 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 14776298  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  14776299 ccaacccta 14776307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 3357068 - 3356958
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| || ||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  3357068 aaaataggcctatgaaaggccataggccaggctcaggccttcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 3356969  T
Q  116 ccaaccctagt 126  Q
    |||||||||||    
T  3356968 ccaaccctagt 3356958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 2732396 - 2732288
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| ||| |||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  2732396 aataggcctatgaaaggccataggccaggctcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 2732297  T
Q  118 aaccctagt 126  Q
    |||||||||    
T  2732296 aaccctagt 2732288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 11410627 - 11410521
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  11410627 aataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 11410528  T
Q  118 aacccta 124  Q
    |||||||    
T  11410527 aacccta 11410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 15943135 - 15943243
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  15943135 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 15943234  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  15943235 ccaacccta 15943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 41892231 - 41892123
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||| ||| |||||||||| |||||||||||||||||  ||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  41892231 aaaaaaggcctatgaaaggccataggccaggctcaggcttgcaaattttttcgtaagccaggctcaggcctatcaaagtctggcctggcctggcctattc 41892132  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  41892131 ccaacccta 41892123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 34521262 - 34521368
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||| ||| |||||| ||||||||| |||||||| ||||||||||||||    
T  34521262 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggtcaggctcaggcctatcaaagcctggcctgacctggcctattccc 34521361  T
Q  118 aacccta 124  Q
    |||||||    
T  34521362 aacccta 34521368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 1411538 - 1411646
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||  ||||||||||||||||| |||||||  |||||||||||||  |||||| ||||||||| |||||||||||||||||||||    
T  1411538 aaaataggcctatgaaagaccataggccaggctcaggcctgcaaaatttttcgtaggccaagctcaggcctatcaaagcctggcctggcctggcctattc 1411637  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  1411638 ccaacccta 1411646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 18533380 - 18533483
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||||||     ||||||||||||||||||    
T  18533380 aaaataggcctatgaaaggtcataggctaggctcaggtctgcaaattttttcgtaggccaggctcaggcctatcaaa-----gcctggcctggcctattc 18533474  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  18533475 ccaacccta 18533483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 41399727 - 41399835
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||  ||||||||||||| ||| |||||||  |||||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  41399727 aaaataggcctatgaaagaccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaag-ccggcctggcctggcctattc 41399825  T
Q  116 ccaaccctag 125  Q
    ||||||||||    
T  41399826 ccaaccctag 41399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 10227957 - 10227858
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| |||||||||||||| ||||||  ||  | |  ||||||||||||| |||||| ||||||||||||||||||||||||||||||| || |||||    
T  10227957 ctatgataggtcataggccagactcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattctcaccccta 10227858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 23671171 - 23671270
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| || ||| |||||||||||||||||||||||||||||||||| |||||    
T  23671171 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccagacttaggcctatcaaagtctggcctggcctggcctattcccaccccta 23671270  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 31673646 - 31673556
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||||| |||||||||||||||||| | ||||| | ||| |||| |||||||||| ||| |||||| |||||||||||| |||||||||    
T  31673646 aaaataggcctatgaaaggtcataggctaagctcaagcctgtaaattttttcgtaggtcaggctcaggcctatcaaagtctagcctggcct 31673556  T

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Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 12419178 - 12419271
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  12419178 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 12419271  T

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Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 43596200 - 43596297
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccc 122  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||    
T  43596200 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaagctcaggcctatcaaagcctggcctggcctggcctattcccaaccc 43596297  T

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Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 12077256 - 12077200
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctag 125  Q
    |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  12077256 taggccagacccaggcctatcaaagtctggcctggcctggcctattcccaaccctag 12077200  T

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Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 41902863 - 41902963
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||||||||  |||||||||||||||||| |||||    
T  41902863 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggtatggcctggcctattcccatcccta 41902962  T
Q  125 g 125  Q
    |    
T  41902963 g 41902963  T

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Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 48214171 - 48214111
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccag 76  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  48214171 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccag 48214111  T

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Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 2941197 - 2941255
Alignment:
Q  68 gtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  2941197 gtaggtcaggctcaggcctatcaaagtctggcctggcctggcctattcccacccctagt 2941255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 31377431 - 31377365
Alignment:
Q  58 aaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||| ||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||| |||||    
T  31377431 aaattttttcgtaggccaggttcaggcctatcaaagcctggcctggcctggcctattcccaccccta 31377365  T

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Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 44848114 - 44848016
Alignment:
Q  26 tatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| ||||||  |||||||| |||||||||||||||||||||||| |||||    
T  44848114 tatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcttatcaaagcctggcctggcctggcctattcccaccccta 44848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 13391153 - 13391060
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||| ||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  13391153 ctatgataggccataggccaggctcaggcttgtgatttattttgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 13391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 21806560 - 21806499
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctag 125  Q
    ||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  21806560 tttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccacccctag 21806499  T

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Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 34002787 - 34002892
Alignment:
Q  13 aagaaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggccta 112  Q
    |||||||| || |||| | |||||||||||||||||||||  || |||| |||| ||||||| | |||| | ||||||||| |||| ||||| |||||||    
T  34002787 aagaaaatcggcctataataggtcataggccaggctcaggcttgtaaatttttttgtaggcctgactcaagcctatcaaagcctggtctggcttggccta 34002886  T
Q  113 ttccca 118  Q
    ||||||    
T  34002887 ttccca 34002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 2196104 - 2196044
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||  ||||| |||||||||||||| |||||||| ||||||||||||||||    
T  2196104 tttcgtaggccagattcaggcctatcaaagtctggtctggcctgacctattcccaacccta 2196044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 8485925 - 8486010
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||||  ||||||||||  | |||| ||||| ||| |||||||| |||||||||||||| |||||| ||||||||| |||||||    
T  8485925 aaaatagacctatgaaaggctacaggctaggctgaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcct 8486010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 15757709 - 15757769
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||| |||||||||| |||||    
T  15757709 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctgacctattcccaccccta 15757769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 24421915 - 24422023
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| | |||||||| ||||||||||||||| |  ||||||    ||||| |||||  |||||| ||||||||| |||||||| ||| ||||||||    
T  24421915 aaaataggcccatgaaaggccataggccaggctcacgcttgcaaaaaaattcgtcggccatgctcaggcctatcaaagcctggcctgacctcgcctattc 24422014  T
Q  116 ccaacccta 124  Q
    ||| |||||    
T  24422015 ccaccccta 24422023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 36820936 - 36820991
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||  |||||| ||||||||| |||| |||||||||||||||||||||||||    
T  36820936 taggccaagctcaggcctatcaaagcctggtctggcctggcctattcccaacccta 36820991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 37807044 - 37806989
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||| |||||| |||||||| ||||||||| |||||||||||| ||||||||    
T  37807044 taggccaggctcaggcctatcaaaatctggcctgacctggcctattctcaacccta 37806989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 31249410 - 31249492
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctgg 98  Q
    |||||||| || ||||||| |||||||||||||||||| ||| ||    ||||||| |||| |||||| ||||||||||||||    
T  31249410 aaaataggcctttgaaaggccataggccaggctcaggtttgcgaaaaaattcgtagaccaggctcaggcctatcaaagtctgg 31249492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 20251649 - 20251689
Alignment:
Q  129 ggaggtattaaattccaataattcatttggctctttggtaa 169  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  20251649 ggaggtattgaattccaataattcatttggttctttggtaa 20251689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 27595700 - 27595760
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||| |||  |||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  27595700 tttcgtagaccatactcaggcctatcaaagtctgacctgacctgacctattcccaccccta 27595760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 33450261 - 33450369
Alignment:
Q  13 aagaaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggccta 112  Q
    |||||||  ||||||||| ||| ||||||| ||||| |||  || | |  |||||||||| ||| |||||  || |||||||||||| ||||||  ||||    
T  33450261 aagaaaaacggtctatgataggccataggctaggcttaggcttgtataatttttcgtaggtcaggctcagtcctttcaaagtctggcttggccttaccta 33450360  T
Q  113 ttcccaacc 121  Q
    |||||||||    
T  33450361 ttcccaacc 33450369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 37807066 - 37807030
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcagg 52  Q
    |||||||| |||||||||| |||||||||||||||||    
T  37807066 aaaataggcctatgaaaggccataggccaggctcagg 37807030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 40000797 - 40000905
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  40000797 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 40000896  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  40000897 ccaacccta 40000905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 19421068 - 19420961
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  19421068 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 19420969  T
Q  118 aaccctag 125  Q
    ||||||||    
T  19420968 aaccctag 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 39391156 - 39391050
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  39391156 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 39391057  T
Q  118 aacccta 124  Q
    |||||||    
T  39391056 aacccta 39391050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 24540994 - 24541102
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||| ||||||||||    
T  24540994 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcttggcctattc 24541093  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  24541094 ccaacccta 24541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 28793756 - 28793648
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| ||||||     
T  28793756 aaaataggtctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattt 28793657  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  28793656 ccaacccta 28793648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 29076970 - 29076864
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  29076970 aataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 29076871  T
Q  118 aacccta 124  Q
    |||||||    
T  29076870 aacccta 29076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 1782702 - 1782810
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||| ||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  1782702 aaaataggcctatgaaaggccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 1782801  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  1782802 ccaacccta 1782810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 33249520 - 33249412
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| ||||| |||||||||||||||    
T  33249520 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcttggcctggcctattc 33249421  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  33249420 ccaacccta 33249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 34705327 - 34705435
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||| ||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  34705327 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaattttgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 34705426  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  34705427 ccaacccta 34705435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 47597102 - 47597210
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||| ||||||||||||||||    
T  47597102 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattc 47597201  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  47597202 ccaacccta 47597210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 13596268 - 13596161
Alignment:
Q  17 aaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcc 116  Q
    ||||||| |||||||||| ||||  |||||||||||  ||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  13596268 aaataggcctatgaaaggccatataccaggctcaggcttgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcc 13596169  T
Q  117 caacccta 124  Q
    ||||||||    
T  13596168 caacccta 13596161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 20647813 - 20647921
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||  |||||||  |||||||||||||| |||||| ||||||||| ||||||||||||| ||||||     
T  20647813 aaaataggcctatgaaaggccataggccaggctcagacctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattt 20647912  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  20647913 ccaacccta 20647921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 26994786 - 26994885
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| ||||||||||||||||| ||| |||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  26994786 ctatgataggccataggccaggctcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagtctggcctggtctggcctattcccaccccta 26994885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 34636445 - 34636350
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcct 111  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| ||| |||||||||||||    
T  34636445 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgacctggcctggcct 34636350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 33370518 - 33370415
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||| |||||||| ||||| |||||| |||||||||     |||||||||||||||||    
T  33370518 aaaataggcctatgaaaggtcataggccaggcttaggcctgcaaattttttcgtatgccagactcaggcctatcaaag-----cctggcctggcctattc 33370424  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  33370423 ccaacccta 33370415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 52174823 - 52174926
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||     ||||||||||||||||||    
T  52174823 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccagactcaggcctatcaaa-----gcctggcctggcctattc 52174917  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  52174918 ccaacccta 52174926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 33069479 - 33069549
Alignment:
Q  54 ctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  33069479 ctgcaaattttttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaacccta 33069549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 40489063 - 40489173
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||| | |||||||||| ||||||||||||||||| ||| |||| |||||||| ||||| |||||| ||||||||| |||| ||||||| ||||||||    
T  40489063 aaaataagcctatgaaaggccataggccaggctcaggcctggaaattttttcgtaagccaggctcaggcctatcaaagcctggtctggcctagcctattc 40489162  T
Q  116 ccaaccctagt 126  Q
    |||| ||||||    
T  40489163 ccaatcctagt 40489173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 39889420 - 39889319
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| ||||||||||||||||| ||| |||| |||||||||||||| |||||| ||||||||| |||| |||| |||||||||||||| |||||    
T  39889420 ctatgataggccataggccaggctcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagcctggtctggtctggcctattcccaccccta 39889321  T
Q  125 gt 126  Q
    ||    
T  39889320 gt 39889319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 25536944 - 25536867
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaag 93  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||| |||||||||    
T  25536944 aaaataggcctatgaaaggtcatagaccaggctcaggcctgcaaattttttcgtaggccagactcaggcctatcaaag 25536867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 54650549 - 54650445
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||| ||||| ||||||||||||||||| |||||||  |||||||||||||| |||||  |||||||||     |||||||||||||||||    
T  54650549 aaaataggcctataaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcagacctatcaaag-----cctggcctggcctattc 54650455  T
Q  116 ccaaccctag 125  Q
    ||||||||||    
T  54650454 ccaaccctag 54650445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 4481748 - 4481648
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| ||||||||||||| |||  || | || |||||||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||    
T  4481748 ctatgataggccataggccaggcttaggcttgtatattttttcgtaggccaggctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 4481649  T
Q  125 g 125  Q
    |    
T  4481648 g 4481648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 34422684 - 34422787
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| || |||||||||||||| ||| || ||||||||     ||||||||||||||||||    
T  34422684 aaaataggcctgtgaaaggccataggccaggctcaggcctgcatattttttcgtaggccaggctcgggcctatcaaa-----gcctggcctggcctattc 34422778  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  34422779 ccaacccta 34422787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 47844603 - 47844526
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaag 93  Q
    |||||||| |||||||||| ||||||||||||||||  |||||||| |||||||||||||| |||||| |||||||||    
T  47844603 aaaataggcctatgaaaggccataggccaggctcagacctgcaaattttttcgtaggccagactcaggcctatcaaag 47844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 4357082 - 4357150
Alignment:
Q  58 aaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    |||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  4357082 aaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctagt 4357150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 9338287 - 9338386
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||| ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  9338287 ctatgataggccataggccaggctcaggcttgtgatttatttcgcaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 9338386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 46068094 - 46068008
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctg 102  Q
    |||||||| |||||||| | ||||||||||||||||| |||||||| ||||||||||| || |||| | |||||| |||||||||||    
T  46068094 aaaataggcctatgaaaagccataggccaggctcaggcctgcaaattttttcgtaggctaggctcaagcctatcatagtctggcctg 46068008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 55008199 - 55008113
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctg 102  Q
    |||||||| |||||||||| || | |||||||||||| |||||||| |||||||||| ||| |||||  ||||||||||||||||||    
T  55008199 aaaataggcctatgaaaggccacaagccaggctcaggcctgcaaattttttcgtaggacaggctcagacctatcaaagtctggcctg 55008113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 41636343 - 41636283
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  41636343 tttcgtaggccagactcaggcctatcaaagcctggcctggcctggcctattcccaccccta 41636283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 51302460 - 51302360
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||| |||||    
T  51302460 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctagcctggcctattcccaccccta 51302361  T
Q  125 g 125  Q
    |    
T  51302360 g 51302360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 53002263 - 53002186
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaag 93  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||||| |||| ||||||||| |||||  |||||||||    
T  53002263 aaaataggtctatgaaaggccataggccaagctcagacctgcaaatttttttgtaggccaggctcagacctatcaaag 53002186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 41129762 - 41129829
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    ||||||||||||||  || |||| |||||||||||||| |||||| ||||||||| ||||||||||||    
T  41129762 aggccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcct 41129829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 46136403 - 46136470
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    ||||||||||||||  || |||| |||||||||||||| |||||| ||||||||| ||||||||||||    
T  46136403 aggccaggctcaggcttgtaaattttttcgtaggccagactcaggcctatcaaagcctggcctggcct 46136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 2222100 - 2222190
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||| | |||||||||| | ||||||||||| |||  ||| ||  |||||||||||||| |||||| ||||||||| ||||||||||||    
T  2222100 aaaataagcctatgaaaggccgtaggccaggcttaggcttgctaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcct 2222190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 22523459 - 22523398
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctag 125  Q
    ||||||||||||| |||||||||||||||| |||| |||  |||||||||||||| ||||||    
T  22523459 tttcgtaggccaggctcaggtctatcaaagcctggtctgatctggcctattcccacccctag 22523398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 33910195 - 33910154
Alignment:
Q  85 ctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  33910195 ctatcaaagcctggcctggcctggcctattcccaaccctagt 33910154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 43010299 - 43010360
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||| |||||  |||||||||||| |||||  ||||||||||||||||||||    
T  43010299 ttttcgtaggccaggctcagacctatcaaagtctagcctgatctggcctattcccaacccta 43010360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 7046801 - 7046861
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| ||| || |||||||||||| |||||||||| |||||||||| |||||    
T  7046801 tttcgtaggccagactctggcctatcaaagtctagcctggcctgacctattcccaccccta 7046861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 54447641 - 54447581
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||| ||||| |||||| ||||||||| |||||||||| ||||||||||||| |||||    
T  54447641 tttcgtatgccaggctcaggcctatcaaagcctggcctggcttggcctattcccaccccta 54447581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 26020420 - 26020471
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||||||| |||||| ||||||||||||| |||| ||||||||||||    
T  26020420 tttcgtaggccagactcaggcctatcaaagtctgacctgacctggcctattc 26020471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 25593737 - 25593791
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    ||||||||||||| |||||| ||||||||| ||| |||| |||||||||||||||    
T  25593737 tttcgtaggccaggctcaggcctatcaaagcctgacctgccctggcctattccca 25593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 24133855 - 24133774
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| ||||||||||||    
T  24133855 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcct 24133774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 39171435 - 39171479
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaa 60  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||    
T  39171435 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaa 39171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 42294169 - 42294127
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||    
T  42294169 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 42294127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 14751870 - 14751810
Alignment:
Q  58 aaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    |||| |||||||||| ||| |||||| ||||| ||  |||||||| |||||||||||||||    
T  14751870 aaattttttcgtaggtcaggctcaggcctatctaaacctggcctgacctggcctattccca 14751810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 46116525 - 46116481
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaa 60  Q
    |||||||| |||||||||| ||||||||||||||||  |||||||    
T  46116525 aaaataggcctatgaaaggccataggccaggctcagacctgcaaa 46116481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 13029122 - 13029230
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  13029122 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 13029221  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  13029222 ccaacccta 13029230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 21198152 - 21198260
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  21198152 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 21198251  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  21198252 ccaacccta 21198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 32084130 - 32084241
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  32084130 aaaataggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcgtaggccagactcaggcctatcaaagtctgccctggcctggcctattc 32084229  T
Q  116 ccaaccctagtg 127  Q
     |||||||||||    
T  32084230 tcaaccctagtg 32084241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 40737908 - 40737800
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  40737908 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 40737809  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  40737808 ccaacccta 40737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 34726343 - 34726449
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| ||| |||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  34726343 aataggcctatgaaaggccataggccaggctcaggcctgtaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 34726442  T
Q  118 aacccta 124  Q
    |||||||    
T  34726443 aacccta 34726449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12033841 - 12033948
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||| ||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  12033841 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaattttt-gtaggccaggctcaggcctatcaaagtctggcctggcctagcctattc 12033939  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  12033940 ccaacccta 12033948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 17852767 - 17852887
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||| ||| ||||||| |||||| | |||| ||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  17852767 aaaataggcctatgaaaggccatagaccaagctcaggcctgcaattttttt-gtaggccagactcaggcctatcaaagtctgacctggcctggcctattc 17852865  T
Q  116 ccaaccctagtggggaggtatt 137  Q
    |||||| |||||||||| ||||    
T  17852866 ccaaccttagtggggagttatt 17852887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 36985416 - 36985504
Alignment:
Q  36 cataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||| |||||||||||||||||||||||||    
T  36985416 cataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccaacccta 36985504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 29557523 - 29557415
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||  ||||||||||||||||    
T  29557523 aaaataggcctatgaaaggccataggctaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgatctggcctggcctattc 29557424  T
Q  116 ccaacccta 124  Q
     || |||||    
T  29557423 acagcccta 29557415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 43616412 - 43616303
Alignment:
Q  17 aaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcc 116  Q
    ||||||| |||||||||| |||| ||||| |||||| |||||||  |||||||||||||| |||||| ||||||||||||| | ||| |||||||||| |    
T  43616412 aaataggcctatgaaaggccataagccagactcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagtctgacatggtctggcctatttc 43616313  T
Q  117 caaccctagt 126  Q
    ||||||||||    
T  43616312 caaccctagt 43616303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 5936787 - 5936890
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||| || ||||||||     ||||||||||||||||||    
T  5936787 aaaataggcctatgaaaggccataggccaggctcaggcctacaaattttttcgtaggccaggctcgggcctatcaaa-----gcctggcctggcctattc 5936881  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  5936882 ccaacccta 5936890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 6283418 - 6283332
Alignment:
Q  38 taggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||||  || |||| |||||||||||||| |||| | ||||||||||||||||||||||| |||||||||| |||||    
T  6283418 taggccaggctcaggcttgtaaattttttcgtaggccagactcaagcctatcaaagtctggcctggcctgacctattcccaccccta 6283332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 35959414 - 35959329
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||  || |||| |||||||||||||| |||||| |||||||||  ||||||||||||||||||||||| |||||    
T  35959414 aggccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcaaagcttggcctggcctggcctattcccaccccta 35959329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 38213504 - 38213419
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||| ||||||||| |||||| ||||||||  |||||||    
T  38213504 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaatttttttgtaggccaggctcaggcctatcaaaacctggcct 38213419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 7592559 - 7592662
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||| ||||||| |||||||  |||||||||||||| ||||||  |||||||     ||||| ||||||||||||    
T  7592559 aaaataggcctatgaaaggccataggccatgctcaggcctgcaaaatttttcgtaggccaggctcaggcgtatcaaa-----gcctgacctggcctattc 7592653  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  7592654 ccaacccta 7592662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 2995068 - 2995167
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||    
T  2995068 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggtctggcctggcctattcccaccccta 2995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 26260291 - 26260390
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||    
T  26260291 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaacccta 26260390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 38448096 - 38448158
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  38448096 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattctcaaccctagt 38448158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 43999649 - 43999726
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaag 93  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||| ||||| || ||||| ||||||||||||||||    
T  43999649 aaaataggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcataagccaggctcaggtctatcaaag 43999726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 2182783 - 2182843
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||    
T  2182783 tttcgtaggccaggctcaggcctatcaaagtctggcctgacctggcctattcccatcccta 2182843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 29044165 - 29044105
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  29044165 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 29044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 6420021 - 6420073
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcc 116  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  6420021 tttcgtaggccaggctcaggcctatcaaagtctggcctggcctgacctattcc 6420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 29768350 - 29768290
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||| |||||    
T  29768350 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattaccaccccta 29768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 44092833 - 44092933
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||  ||||||||  |||||||||||||||||||||||| |||||    
T  44092833 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcagacctatcaaaacctggcctggcctggcctattcccaccccta 44092932  T
Q  125 g 125  Q
    |    
T  44092933 g 44092933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 18075797 - 18075878
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctg 102  Q
    ||||||||||||||||||| ||||||||| ||||| | |||||||| ||||||||||     |||||| ||| ||||||||||||||    
T  18075797 aaaataggtctatgaaaggccataggccaagctcaagcctgcaaattttttcgtagg-----ctcaggcctaacaaagtctggcctg 18075878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 31452946 - 31452999
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    ||||||||||||  |||||| |||||||||||||||||| ||||||||||||||    
T  31452946 tttcgtaggccaaactcaggcctatcaaagtctggcctgacctggcctattccc 31452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 6431576 - 6431516
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| |||||||| |||| |||||||||| |||||    
T  6431576 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctgacctattcccaccccta 6431516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 39133336 - 39133235
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||| ||||||||| | |||||||  ||||||||| |||| |||| | |||||||||     |||| |||| |||||||    
T  39133336 aaaataggcctatgaaaggccatagaccaggctcaagcctgcaaaaattttcgtagaccaggctcaagcctatcaaag-----cctgacctgtcctattc 39133242  T
Q  116 ccaaccc 122  Q
    |||||||    
T  39133241 ccaaccc 39133235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 12880567 - 12880456
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggccta-tt 114  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||| ||    
T  12880567 aaaataggcctatgaaaggtcataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattt 12880468  T
Q  115 cccaaccctagt 126  Q
    ||||||||||||    
T  12880467 cccaaccctagt 12880456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9163536 - 9163428
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  9163536 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 9163437  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  9163436 ccaacccta 9163428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 4049457 - 4049565
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||  |||||  |||||||||| |||||||||||| |||||||    
T  4049457 aaaataggtctatgaaaggtcataggccaggctcaggcctgcaaattttttcgtaggtcaaactcagacctatcaaagtgtggcctggcctgacctattc 4049556  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  4049557 ccaacccta 4049565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 31271449 - 31271557
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| || ||||| |||||||||||||| || ||| ||||||||| |||||||||||||||||||||    
T  31271449 aaaataggcctatgaaaggccataggccaggctcaggcctacaaattttttcgtaggccaggcttaggcctatcaaagcctggcctggcctggcctattc 31271548  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  31271549 ccaacccta 31271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 6644173 - 6644283
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| |||| |||| |||| |||| |||||||||||    
T  6644173 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctattaaagcctggtctggtctggcctattc 6644272  T
Q  116 ccaaccctagt 126  Q
    |||||||||||    
T  6644273 ccaaccctagt 6644283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 7079098 - 7078990
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||| | ||||||||| |||||||| ||||||| ||||    
T  7079098 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaagcctatcaaagcctggcctgacctggcccattc 7078999  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  7078998 ccaacccta 7078990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 42062322 - 42062430
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||  ||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  42062322 aaaataggcttatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 42062421  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  42062422 ccaacccta 42062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 491341 - 491250
Alignment:
Q  36 cataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagtg 127  Q
    ||||||||||||||||| |||||||| |||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  491341 cataggccaggctcaggcctgcaaattttttcgtaggccaggcttaggcctatcaaagcctggcctggcctggcctattcccaaccctagtg 491250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 4101285 - 4101180
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||  |||||||||| ||| |||||| ||||||||| |||||||| ||||||||||||    
T  4101285 aaaataggcctatgaaaggccataggtcaggctcaggcctgcaaaatttttcgtaggtcagactcaggcctatcaaagcctggcctgacctggcctattc 4101186  T
Q  116 ccaacc 121  Q
    ||||||    
T  4101185 ccaacc 4101180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 7035270 - 7035162
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||  ||||||||| ||| |||| ||| || |||||    
T  7035270 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccagactcagacctatcaaagcctgacctgacctagcatattc 7035171  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  7035170 ccaacccta 7035162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 42288518 - 42288621
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||| |||||| ||||||||     ||||||||||| ||||||    
T  42288518 aaaataggtctatgaaaggccataggccaggctcaggcctgcaatttttttcgtaggccagactcaggcctatcaaa-----gcctggcctggtctattc 42288612  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  42288613 ccaacccta 42288621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 10931726 - 10931618
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||| ||||| | ||||||| ||||| | |||||||| |||||||||||||| |||||| |||||||| ||||||||| || |||||||||    
T  10931726 aaaataggcctataaaaggccctaggccaagctcatgcctgcaaattttttcgtaggccagactcaggcctatcaaaatctggcctgaccaggcctattc 10931627  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  10931626 ccaacccta 10931618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 10017848 - 10017761
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    ||||||||||||||  || |||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  10017848 aggccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctagt 10017761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 40084082 - 40083983
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  40084082 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 40083983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 18158477 - 18158376
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  18158477 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacccta 18158378  T
Q  125 gt 126  Q
    ||    
T  18158377 gt 18158376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 38254752 - 38254693
Alignment:
Q  65 ttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  38254752 ttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaccccta 38254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 14949563 - 14949648
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||  || |||| |||||||||||||| |||||  ||||||||| ||||||||||||| |||||||||| |||||    
T  14949563 aggccaggctcaggcttgtaaattttttcgtaggccaggctcagacctatcaaagcctggcctggcctgacctattcccaccccta 14949648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 11877522 - 11877462
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  11877522 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacccta 11877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 27332510 - 27332621
Alignment:
Q  13 aagaaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggccta 112  Q
    ||||||| ||| |||||| ||| ||||||||||||| |||  || | |  |||||||||||||| ||||||  | |||||| |||| |||||||||||||    
T  27332510 aagaaaaaaggcctatgataggccataggccaggcttaggcttgtataatttttcgtaggccaggctcaggcatttcaaagcctggtctggcctggccta 27332609  T
Q  113 ttcccaacccta 124  Q
    ||||||||||||    
T  27332610 ttcccaacccta 27332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 15397617 - 15397563
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    ||||||||||||| |||||  ||||||||||||||||||||||| ||||||||||    
T  15397617 tttcgtaggccaggctcagacctatcaaagtctggcctggcctgacctattccca 15397563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 370254 - 370164
Alignment:
Q  26 tatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcc 116  Q
    ||||| ||| |||||||||| |||||| ||  |||| |||||||||  ||| |||||| |||||||||||| | |||||||| ||||||||    
T  370254 tatgataggccataggccagactcaggcctataaatattttcgtagatcaggctcaggcctatcaaagtcttgtctggcctgacctattcc 370164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 18295244 - 18295192
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcc 116  Q
    ||||||||||||| |||| | |||||||||||||||||| |||| ||||||||    
T  18295244 tttcgtaggccagactcaagcctatcaaagtctggcctgacctgacctattcc 18295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 36113224 - 36113148
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||||||||||||| |||||||    
T  36113224 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggtctatcaaagcctggcct 36113148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 14084526 - 14084572
Alignment:
Q  78 ctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||||||||| ||| ||||||||||||||||| ||||||||    
T  14084526 ctcaggcctatcaaagcctgacctggcctggcctattctcaacccta 14084572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 17870105 - 17870147
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||    
T  17870105 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 17870147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 32298667 - 32298731
Alignment:
Q  54 ctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||| |||||||||||||| |||||  ||||||||     |||||||||||||||||||||||||||    
T  32298667 ctgcaaat-ttttcgtaggccaggctcagacctatcaaa-----gcctggcctggcctattcccaacccta 32298731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 34855400 - 34855338
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    ||||||||||||||  || |||| |||||||||||||| |||| | ||||||||| |||||||    
T  34855400 aggccaggctcaggcttgtaaattttttcgtaggccaggctcaagcctatcaaagcctggcct 34855338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 858696 - 858635
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||| |||||||| |||||| || ||||||||||||||| | || |||||||||| |||||    
T  858696 ttttcataggccagactcagggctttcaaagtctggcctgacatgacctattcccaccccta 858635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 40730456 - 40730562
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  40730456 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 40730555  T
Q  118 aacccta 124  Q
    |||||||    
T  40730556 aacccta 40730562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 48826106 - 48826000
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  48826106 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 48826007  T
Q  118 aacccta 124  Q
    |||||||    
T  48826006 aacccta 48826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8753803 - 8753911
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||| | ||||||||| |||||||||||||||||||||    
T  8753803 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcatgcctatcaaagcctggcctggcctggcctattc 8753902  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  8753903 ccaacccta 8753911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 38308091 - 38308197
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  38308091 aataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccc 38308190  T
Q  118 aacccta 124  Q
    |||||||    
T  38308191 aacccta 38308197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 37011001 - 37011108
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  37011001 aaaataggcctatgaaaggccataggccag-ctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagtctggcctggcctagcctattc 37011099  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  37011100 ccaacccta 37011108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 48089808 - 48089916
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||| |||||||||||| |||||||| |||||||||||||| |||||| ||||||||| ||| |||||||||||||||||    
T  48089808 aaaataggcctatgaaaggccatatgccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgacctggcctggcctattc 48089907  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  48089908 ccaacccta 48089916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 10010886 - 10010992
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||  ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||    
T  10010886 aataggcctatgaaagaccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattccc 10010985  T
Q  118 aacccta 124  Q
    |||||||    
T  10010986 aacccta 10010992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 10018027 - 10018133
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||  ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||    
T  10018027 aataggcctatgaaagaccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattccc 10018126  T
Q  118 aacccta 124  Q
    |||||||    
T  10018127 aacccta 10018133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 52225656 - 52225770
Alignment:
Q  11 cgaagaaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcc 110  Q
    |||| |||||||| ||||||||||  |||||||||||||||| |||||||| ||||||||| | || |||||  |||||||||||||||||| |||||||    
T  52225656 cgaaaaaaataggcctatgaaaggctataggccaggctcaggcctgcaaattttttcgtagactagactcagacctatcaaagtctggcctgacctggcc 52225755  T
Q  111 tattcccaaccctag 125  Q
    |||||||||||||||    
T  52225756 tattcccaaccctag 52225770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 11845391 - 11845479
Alignment:
Q  36 cataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  11845391 cataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 11845479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 47691684 - 47691596
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  47691684 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagtctggcctggcct 47691596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 48801253 - 48801356
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||||| ||||||||     ||||||||||||||||||    
T  48801253 aaaataggcctatgaaaggtcataggccaggctcaggcctgcaaattttttcgttggccaggctcaggcctatcaaa-----gcctggcctggcctattc 48801347  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  48801348 ccaacccta 48801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 41487557 - 41487454
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| |||||||||     |||||||||||||||||    
T  41487557 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaag-----cctggcctggcctattc 41487463  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  41487462 ccaacccta 41487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 7363552 - 7363658
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||| | ||||||||| ||||| || ||||||||||||    
T  7363552 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaag-ctatcaaagcctggcatgacctggcctattc 7363650  T
Q  116 ccaaccct 123  Q
    ||||||||    
T  7363651 ccaaccct 7363658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 48659419 - 48659320
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||||||||||||||||||||| ||| |||| ||||||||||| || |||||| ||||||||| || ||||||||||||||||||||| |||||    
T  48659419 ctatgataggtcataggccaggctcaggcctgtaaattttttcgtaggctaggctcaggcctatcaaagcctagcctggcctggcctattcccaccccta 48659320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 20039671 - 20039756
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||    
T  20039671 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcct 20039756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9627594 - 9627486
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||| ||| |||||| ||||||||  ||| ||||||||| |||||| ||||||||| |||||||| |||||||||||     
T  9627594 aaaataggcctatgaaaggccataggtcagactcaggcctgcaaattcttttgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattt 9627495  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  9627494 ccaacccta 9627486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 38973690 - 38973598
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctgg 108  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||||  |||||||||||||    
T  38973690 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtagtccaggctcaggcctatcaaagcatggcctggcctgg 38973598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 41324430 - 41324532
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||| ||||||||     ||||||||||||||||||    
T  41324430 aaaataggcctatgaaaggccataggccagactcaggcctgcaaat-ttttcgtaggccagactcaggcctatcaaa-----gcctggcctggcctattc 41324523  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  41324524 ccaacccta 41324532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 16711849 - 16711742
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| || ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||  ||||||||| || || ||||||| |||||| ||    
T  16711849 aataggcctgtgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccagactcagacctatcaaagcctagcttggcctgacctatttcc 16711750  T
Q  118 aaccctag 125  Q
    ||||||||    
T  16711749 aaccctag 16711742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 4422126 - 4422060
Alignment:
Q  58 aaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  4422126 aaattttttcgtaggccaggctcaggtctatcaaagcctggcctggcctggcctattcccaccccta 4422060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 17981324 - 17981423
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||    
T  17981324 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggtctggcctggcctattcccaccccta 17981423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 29590496 - 29590595
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  29590496 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 29590595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 32468336 - 32468397
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  32468336 ttttcgtaggctagactcaggtctatcaaagtctggcctggcctggcctatttccaccccta 32468397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 3097928 - 3097988
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  3097928 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 3097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 36488831 - 36488771
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||||||||| |||||    
T  36488831 tttcgtaggccaggctcagacctatcaaagtctggcctggcctggcctattcccatcccta 36488771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 31842948 - 31842846
Alignment:
Q  22 ggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacc 121  Q
    ||||||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| |||||||| |||||| |||||||| ||    
T  31842948 ggtctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcttattcccaccc 31842849  T
Q  122 cta 124  Q
    |||    
T  31842848 cta 31842846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 12582198 - 12582099
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| |||||||||||||| |||||| || |||||    
T  12582198 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccagactcaggcctatcaaagcctggcctggcctggactattctcaccccta 12582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 50637205 - 50637308
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||| ||||||| ||  | |  ||||||||||||  |||||| ||||||||| |||||||| ||| ||||||||||| |||||    
T  50637205 ctatgataggccataggccagactcaggtttgtgatttatttcgtaggccaagctcaggcctatcaaagcctggcctgacctagcctattcccaccccta 50637304  T
Q  125 gtgg 128  Q
    ||||    
T  50637305 gtgg 50637308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 8672847 - 8672742
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||| | ||||  |||||||| ||||||||| | || ||||   |||||||||     |||||||||||||||||    
T  8672847 aaaataggcctatgaaaggccataggccaagttcagacctgcaaattttttcgtagactagactcaaacctatcaaag-----cctggcctggcctattc 8672753  T
Q  116 ccaaccctagt 126  Q
    |||||||||||    
T  8672752 ccaaccctagt 8672742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 32212272 - 32212215
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    |||||| | |||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  32212272 taggcccggctcaggcctatcaaagcctggcctagcctggcctattcccaaccctagt 32212215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 517608 - 517548
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||  |||||||||||||||||| |||| |||||||||| |||||    
T  517608 tttcgtaggccaggctcagacctatcaaagtctggcctgacctgacctattcccaccccta 517548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 5258812 - 5258756
Alignment:
Q  68 gtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||| |||||||||||||||| |||||||| ||| ||||||||||| |||||    
T  5258812 gtaggccaggctcaggtctatcaaagcctggcctgacctagcctattcccaccccta 5258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 40412838 - 40412893
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||| || |||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  40412838 taggctagactcaggcctatcaaagcctggcctggcctgacctattcccaacccta 40412893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 46903932 - 46904018
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctag 125  Q
    ||||||||||||||  || |||   ||||||||| ||| |||||| |||||||||  ||||||||||||| ||||||||| ||||||    
T  46903932 aggccaggctcaggcttgtaaaaaatttcgtaggtcaggctcaggcctatcaaagcatggcctggcctggtctattcccacccctag 46904018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 35041816 - 35041896
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggc-ctggcctattccca 118  Q
    |||||| |||||||  || |||| |||| ||||||||| |||||| |||||||||||||| ||||| | ||||||||||||    
T  35041816 aggccaagctcaggcttgtaaatttttttgtaggccaggctcaggcctatcaaagtctggtctggctcaggcctattccca 35041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 20392957 - 20393040
Alignment:
Q  32 aggtcataggccaggctcaggtctgcaaatctt-ttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctatt 114  Q
    ||||||||||||||||||||| ||| |||     ||| |||||||| |||||| ||||||||| ||| ||||||||||||||||    
T  20392957 aggtcataggccaggctcaggcctgtaaaaaaaattcataggccaggctcaggcctatcaaagcctgacctggcctggcctatt 20393040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 32212297 - 32212258
Alignment:
Q  13 aagaaaataggtctatgaaaggtcataggccaggctcagg 52  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  32212297 aagaaaataggcctatgaaaggtcataggcccggctcagg 32212258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 25040254 - 25040312
Alignment:
Q  66 tcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||| |||| | |||||||||||||  |||||||| |||||||||| |||||    
T  25040254 tcgtaggccagactcaagcctatcaaagtctgatctggcctgacctattcccaccccta 25040312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 49389993 - 49390021
Alignment:
Q  97 ggcctggcctggcctattcccaaccctag 125  Q
    |||||||||||||||||||||||||||||    
T  49389993 ggcctggcctggcctattcccaaccctag 49390021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 81358 - 81464
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||| | ||||||||| |||||||||||||||||||||||    
T  81358 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaagcctatcaaagcctggcctggcctggcctattccc 81457  T
Q  118 aacccta 124  Q
    |||||||    
T  81458 aacccta 81464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 39860480 - 39860586
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| ||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||    
T  39860480 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtagaccaggctcaggcctatcaaagcctggcctggcctggcctattccc 39860579  T
Q  118 aacccta 124  Q
    |||||||    
T  39860580 aacccta 39860586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 17805921 - 17805813
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||||||||    
T  17805921 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtatgccaggctcaggcctatcaaagcctggcctggcctggcctattc 17805822  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  17805821 ccaacccta 17805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 19708989 - 19709097
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  19708989 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 19709088  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  19709089 ccaacccta 19709097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 34084077 - 34083969
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  34084077 aaaataggcctatgaaaggccataggccagactcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagtctggcctggtctggcctattc 34083978  T
Q  116 ccaacccta 124  Q
    | |||||||    
T  34083977 ctaacccta 34083969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 52222833 - 52222725
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||| ||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  52222833 aaaataggcctatgaaaggccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 52222734  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  52222733 ccaacccta 52222725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 8417335 - 8417225
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||| ||| |||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  8417335 aaaataggcctatgaaaggccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 8417236  T
Q  116 ccaaccctagt 126  Q
    |||| ||||||    
T  8417235 ccaatcctagt 8417225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 18353194 - 18353088
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| |||| |||||||||||| |||||||| |||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||    
T  18353194 aataggcctatgaaaggccataagccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattccc 18353095  T
Q  118 aacccta 124  Q
    |||||||    
T  18353094 aacccta 18353088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 33785302 - 33785192
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||| | |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  33785302 aaaataggcctatgaaaggccataggccaggctcaagcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 33785203  T
Q  116 ccaaccctagt 126  Q
    |||||||||||    
T  33785202 ccaaccctagt 33785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 6889525 - 6889633
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||  |||||||||  |||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  6889525 aaaataggcttatgaaaggctataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctagcctattc 6889624  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  6889625 ccaacccta 6889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 6891371 - 6891479
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||  |||||||||  |||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  6891371 aaaataggcttatgaaaggctataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctagcctattc 6891470  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  6891471 ccaacccta 6891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 24038349 - 24038237
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||| |||||||||  ||||||| |||||||||||||| |||||| ||||||||| |||||||| |||| |||||||    
T  24038349 aaaataggcctatgaaaggccataggctaggctcaggcttgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctgacctattc 24038250  T
Q  116 ccaaccctagtgg 128  Q
    |||||||||||||    
T  24038249 ccaaccctagtgg 24038237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 18437208 - 18437100
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||| |||||  |||||||||     
T  18437208 aaaataggcctatgaaaggccataggctaggctcaggcctgcaaattttttcgtagaccaggctcaggcctatcaaagtctgacctggtttggcctattt 18437109  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  18437108 ccaacccta 18437100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 18448065 - 18447957
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||| |||||  |||||||||     
T  18448065 aaaataggcctatgaaaggccataggctaggctcaggcctgcaaattttttcgtagaccaggctcaggcctatcaaagtctgacctggtttggcctattt 18447966  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  18447965 ccaacccta 18447957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 18453158 - 18453050
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||| |||||  |||||||||     
T  18453158 aaaataggcctatgaaaggccataggctaggctcaggcctgcaaattttttcgtagaccaggctcaggcctatcaaagtctgacctggtttggcctattt 18453059  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  18453058 ccaacccta 18453050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 2988764 - 2988656
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||| ||||||||||  ||||||||||||||||  |||||||  |||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||    
T  2988764 aaaatagatctatgaaagaccataggccaggctcagacctgcaaaaattttcgtaggtcagactcagacctatcaaagtctgacctggcgtggcctattc 2988665  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  2988664 ccaacccta 2988656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 42650061 - 42650160
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||||||||||||||||||||| ||| |||| ||||||||||| || |||||| |||||||||  | ||||||||||||||||||||| |||||    
T  42650061 ctatgataggtcataggccaggctcaggcctgtaaattttttcgtaggctaggctcaggcctatcaaagcttagcctggcctggcctattcccaccccta 42650160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 46846866 - 46846781
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||    
T  46846866 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcct 46846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 31493458 - 31493561
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||| ||||||||||||||||| |  || |||| |||||||||||||| |||||| ||||||||     ||||||||||||||||||    
T  31493458 aaaataggcctatgaaatgtcataggccaggctcaagcttgtaaattttttcgtaggccaggctcaggcctatcaaa-----gcctggcctggcctattc 31493552  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  31493553 ccaacccta 31493561  T

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Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 50097058 - 50097166
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||| ||||||  |||||||| |||||||||||||  |||| | ||||||||  |||  ||||||||||||||||    
T  50097058 aaaataggcctatgaaaggccataggccatgctcagacctgcaaattttttcgtaggccaaactcaagcctatcaaaacctgatctggcctggcctattc 50097157  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  50097158 ccaacccta 50097166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 32239305 - 32239412
Alignment:
Q  17 aaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcc 116  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||   |||| ||||| || |||||| ||||||||  ||||||||||||| ||||||||    
T  32239305 aaataggcctatgaaaggccataggccaggctcaggactgcaaaaaatttcataggctaggctcaggcctatcaaaacctggcctggcctgacctattcc 32239404  T
Q  117 caacccta 124  Q
     |||||||    
T  32239405 taacccta 32239412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 39919703 - 39919604
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| |||||||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  39919703 ctatgataggtcataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 39919604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 7109599 - 7109684
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    ||||||||  ||||||||| ||||||||| ||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||    
T  7109599 aaaataggcttatgaaaggccataggccaagctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcct 7109684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 10805102 - 10805017
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||  || |||| |||||||||||||| |||| | ||||||||| |||||||||||||||||||||||| |||||    
T  10805102 aggccaggctcaggcttgtaaattttttcgtaggccaggctcatgcctatcaaagcctggcctggcctggcctattcccaccccta 10805017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 13253352 - 13253267
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||| ||| |||||||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||    
T  13253352 aaaaaaggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcct 13253267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 44969135 - 44969032
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||| || || ||||| |||||||| ||||||||||| || |||||| |||||||||     |||||||||||||||||    
T  44969135 aaaataggcctatgaaaggccatagaccgggatcaggcctgcaaattttttcgtaggctaggctcaggcctatcaaag-----cctggcctggcctattc 44969041  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  44969040 ccaacccta 44969032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 15321939 - 15322022
Alignment:
Q  41 gccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||  || |||| |||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  15321939 gccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 15322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 6305110 - 6305024
Alignment:
Q  38 taggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||| ||||| ||| |||| ||||| |||||||| |||||  ||||||||| |||||||||||||||||||||||| |||||    
T  6305110 taggccaggttcaggcctgtaaattttttcataggccaggctcagacctatcaaagcctggcctggcctggcctattcccaccccta 6305024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 23555806 - 23555741
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagtgg 128  Q
    |||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||| |||||||||    
T  23555806 ttttcgtaggccaggctcaggcctatcaaagcctgacctggcctggcctattcccacccctagtgg 23555741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 5500024 - 5500084
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  5500024 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 5500084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 13077393 - 13077293
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  |||||||||| || |||||| |||||||||||||||||| ||||||||||||||| |||||    
T  13077393 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggctaggctcaggcctatcaaagtctggcctgacctggcctattcccaccccta 13077294  T
Q  125 g 125  Q
    |    
T  13077293 g 13077293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 13884592 - 13884700
Alignment:
Q  17 aaataggtctatgaaaggtcataggccaggctcaggtctgcaaatct-tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||| ||||||||||||||| |||||||||||  |||||||    ||||||||||||| |||||   ||||||||||||||||| ||||  ||||||    
T  13884592 aaataggcctatgaaaggtcataagccaggctcagacctgcaaaaaaatttcgtaggccaggctcagacttatcaaagtctggcctgacctgatctattc 13884691  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  13884692 ccaacccta 13884700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 15849905 - 15849814
Alignment:
Q  32 aggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccct 123  Q
    |||||||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||  |||||||||||||||||||||||| ||||    
T  15849905 aggtcataggccaggctcaggcttgtgatttatttcgtaggccagactcaggcctatcaaatcctggcctggcctggcctattcccacccct 15849814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 19507156 - 19507057
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| |||||||||| ||||||||||  || || |  ||||||||||||| |||||| ||||||||| |||| |||||||| |||||||||| |||||    
T  19507156 ctatgataggtcataggtcaggctcaggcttgtaatttatttcgtaggccaggctcaggcctatcaaagcctggtctggcctgacctattcccaccccta 19507057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 44912696 - 44912597
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| |||||||||||||||||||||  ||  | |  ||||||||| ||| |||||| |||||||||||||||||| |||| |||||||||| |||||    
T  44912696 ctatgataggtcataggccaggctcaggcttgtgatttatttcgtaggtcagactcaggcctatcaaagtctggcctgacctgacctattcccatcccta 44912597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 34050048 - 34050133
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||  || |||| |||||||||||||| ||||   ||||||||||||||||||||||| |||||| ||| |||||    
T  34050048 aggccaggctcaggcttgtaaattttttcgtaggccaggctcaaacctatcaaagtctggcctggcctgacctatttccaccccta 34050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 3831598 - 3831534
Alignment:
Q  37 ataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||||||||||||| |||||||| |||||||||||||| || ||| ||||||||| |||||||    
T  3831598 ataggccaggctcaggcctgcaaattttttcgtaggccaggcttaggcctatcaaagcctggcct 3831534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 12298233 - 12298133
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| ||| |||||||||||||  ||  | | |||||||||||||| |||||| ||||||||  || ||||||||||||||||||||| |||||    
T  12298233 ctatgataggccattggccaggctcaggcttgtgatttttttcgtaggccagactcaggcctatcaaaacctagcctggcctggcctattcccaccccta 12298134  T
Q  125 g 125  Q
    |    
T  12298133 g 12298133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 18342657 - 18342557
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||| | |||||||||||||| |||| |||||||||||||| |||||    
T  18342657 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaagcctatcaaagtctggtctggtctggcctattcccaccccta 18342558  T
Q  125 g 125  Q
    |    
T  18342557 g 18342557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 6889023 - 6889090
Alignment:
Q  26 tatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaag 93  Q
    ||||||||| |||||| |||||||||| |||||||| |||||||||||||| |||||  |||||||||    
T  6889023 tatgaaaggccataggtcaggctcaggcctgcaaattttttcgtaggccagactcagacctatcaaag 6889090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 295470 - 295432
Alignment:
Q  86 tatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||||||||||||||||||||||||||||    
T  295470 tatcaaagtctggcctggcctggcctattcccaacccta 295432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 10312075 - 10311990
Alignment:
Q  39 aggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||||  || || | |||| ||||||||| |||||| ||||||||| || ||||| ||||||||||||||| |||||    
T  10312075 aggccaggctcaggcttgtaattttttttgtaggccaggctcaggcctatcaaagcctagcctgacctggcctattcccaccccta 10311990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 16452445 - 16452385
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||| ||||| || |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  16452445 tttcataggctaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 16452385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 16461597 - 16461537
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||| ||||| || |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  16461597 tttcataggctaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 16461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 44779541 - 44779600
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccct 123  Q
    |||| |||| ||| |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  44779541 tttcataggtcaggctcaggcctatcaaagcctggcctggcctggcctattcccacccct 44779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 27090885 - 27090927
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  27090885 tttcgtaggccaggctcaggcctatcaaagtctggcctggcct 27090927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 42384299 - 42384218
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcct 106  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||| ||| |||||| ||||||||||||||||||||||    
T  42384299 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggtcaggctcaggcctatcaaagtctggcctggcct 42384218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 45372786 - 45372865
Alignment:
Q  38 taggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaac 120  Q
    ||||||||||||||  |||||||| ||||||   ||||  |||||| |||| |||| ||||||||||||| ||||||||||||    
T  45372786 taggccaggctcagacctgcaaattttttcg---gccatgctcaggcctataaaagcctggcctggcctgacctattcccaac 45372865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 17386374 - 17386417
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctg 107  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||    
T  17386374 tttcgtaggccaggctcaggcctatcaaaatctggcctggcctg 17386417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 26257489 - 26257390
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  |||| |||| ||| |||||| ||||||||| |||  ||||||||||||||||||| |||||    
T  26257489 ctatgataggccataggccaggctcaggcttgtgatttatttcataggtcagactcaggcctatcaaagcctgatctggcctggcctattcccaccccta 26257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 38672157 - 38672256
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||| ||||||| |||||| ||||||||  |||||||||  ||||||||||||| |||||    
T  38672157 ctatgataggccataggccaggctcaggcttgtgatttatttcgaaggccaggctcaggcctatcaaaacctggcctggtttggcctattcccaccccta 38672256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 41008 - 40899
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  41008 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 40909  T
Q  116 ccaaccctag 125  Q
    ||||||||||    
T  40908 ccaaccctag 40899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 7323207 - 7323315
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||| |||||||||||| |||||||| ||||||||||| || |||||| |||| ||||||||||||||||||||||||||    
T  7323207 aaaataggcctatgaaaggccatatgccaggctcaggcctgcaaattttttcgtaggctaggctcaggcctattaaagtctggcctggcctggcctattc 7323306  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  7323307 ccaacccta 7323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 23950396 - 23950292
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||  |||||||| |||||||||||||||||||||    
T  23950396 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcttatcaaagcctggcctggcctggcctattc 23950297  T
Q  116 ccaac 120  Q
    |||||    
T  23950296 ccaac 23950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 26241375 - 26241267
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  26241375 aaaataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattc 26241276  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  26241275 ccaacccta 26241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 36684778 - 36684672
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| |||||||||  ||||||||||||||||||||||    
T  36684778 aataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcgtggcctggcctggcctattccc 36684679  T
Q  118 aacccta 124  Q
    |||||||    
T  36684678 aacccta 36684672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 11989135 - 11989027
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| |||||| |||||||||| |||||||| ||||||| |||||| |||||| |||||||||  ||||||||||||||||||||||    
T  11989135 aataggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcgttggccaggctcaggcctatcaaagcatggcctggcctggcctattccc 11989036  T
Q  118 aaccctagt 126  Q
    |||||||||    
T  11989035 aaccctagt 11989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 36054659 - 36054767
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| | |||||| |||||||||||||| |||||| ||||||||| |||||||||  ||||||||||    
T  36054659 aaaataggcctatgaaaggccataggccaggctcaggccagcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggtatggcctattc 36054758  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  36054759 ccaacccta 36054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 10921176 - 10921068
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    ||||||||||||||||||| ||||||||| ||| ||| |||||||| |||||||||| ||| |||||| ||||||||| |||||||||||  ||||||||    
T  10921176 aaaataggtctatgaaaggccataggccaagcttaggcctgcaaattttttcgtaggtcaggctcaggcctatcaaagcctggcctggccaagcctattc 10921077  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  10921076 ccaacccta 10921068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 32551599 - 32551697
Alignment:
Q  26 tatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||| ||||||||||||||| | |||||||| |||||||||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||||||    
T  32551599 tatgaaaggccataggccaggctcaagcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggtctgacctattcccaacccta 32551697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 33303806 - 33303906
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcc-tggcctattcccaaccct 123  Q
    |||||||||| ||||||||||||||||| |||||||  |||||||||||||| |||||| ||||||||| ||||||||||| |||| |||||||||||||    
T  33303806 ctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggccntggcgtattcccaaccct 33303905  T
Q  124 a 124  Q
    |    
T  33303906 a 33303906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 12615226 - 12615125
Alignment:
Q  18 aataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccc 117  Q
    |||||| |||||||||| ||||||||||||||||| |||||||| |||||||||| ||| |||||| |||||||||     |||||||||||||||||||    
T  12615226 aataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggtcaggctcaggcctatcaaag-----cctggcctggcctattccc 12615132  T
Q  118 aacccta 124  Q
    |||||||    
T  12615131 aacccta 12615125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 35056278 - 35056178
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| ||||||||||| ||||| ||| |||| |||||||||||||| |||||| ||||||||| ||| |||| ||||||||||||||| |||||    
T  35056278 ctatgataggccataggccaggatcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagcctgacctgacctggcctattcccaccccta 35056179  T
Q  125 g 125  Q
    |    
T  35056178 g 35056178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 24580540 - 24580441
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  24580540 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaccccta 24580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 38600869 - 38600951
Alignment:
Q  42 ccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||  || |||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  38600869 ccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 38600951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 16365045 - 16365105
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  16365045 tttcgtaggccagactcaggcctatcaaagtctggcctggcctggcctattcccaccccta 16365105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 14921465 - 14921366
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  ||  | |  ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  14921465 ctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 14921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 44755604 - 44755542
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  44755604 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctagt 44755542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 40680448 - 40680347
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| ||| |||||||||||||||||  || |||| |||||||||||||| |||||| |||||| || |||| ||| ||||||||||| ||| |||||    
T  40680448 ctatgataggccataggccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcatagcctggtctgacctggcctatttccatcccta 40680349  T
Q  125 gt 126  Q
    ||    
T  40680348 gt 40680347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 16383970 - 16384025
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  16383970 taggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 16384025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 10954447 - 10954362
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||| ||| |||||||||| ||||||||||||||||  |||||||  ||||||||| |||| |||||| ||||||||| |||||||    
T  10954447 aaaaaaggcctatgaaaggccataggccaggctcagtcctgcaaaatttttcgtagaccaggctcaggcctatcaaagcctggcct 10954362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 10962452 - 10962367
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||| ||| |||||||||| ||||||||||||||||  |||||||  ||||||||| |||| |||||| ||||||||| |||||||    
T  10962452 aaaaaaggcctatgaaaggccataggccaggctcagtcctgcaaaatttttcgtagaccaggctcaggcctatcaaagcctggcct 10962367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 26106439 - 26106378
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||  |||||| || |||||| ||||||||||||||||||||||||||||||    
T  26106439 ttttcgtaggccaagctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 26106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 7383235 - 7383295
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  7383235 tttcgtaggccaggctcaggcctatcaaagcctggcttggcctggcctattcccaccccta 7383295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 39506693 - 39506753
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| || ||||||||||| ||||||||||||||| |||||||||    
T  39506693 tttcgtaggccaggctcaggcctttcaaagtctggtctggcctggcctatttccaacccta 39506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 7960623 - 7960684
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||| |||||    
T  7960623 ttttcgtaggccagactcaggcctatcaaagcctgacctggcctggcttattcccaccccta 7960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 12638046 - 12637985
Alignment:
Q  63 ttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||||||| || ||| ||||||||| ||||||||||||| |||||||||| |||||    
T  12638046 ttttcgtaggccaggcttaggcctatcaaagcctggcctggcctgacctattcccaccccta 12637985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 32415404 - 32415461
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaaccctagt 126  Q
    |||| ||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  32415404 taggtcaggctcaggcctatcaaagcctgacctggcctggcctattcccaaccctagt 32415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 31519247 - 31519144
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||| ||| ||||| |||| ||||||  ||| ||| |||||||||||||| |||||| ||||||     | ||||| ||||||||||||    
T  31519247 aaaataggcctatgataggccatagaccagactcaggcttgctaattttttcgtaggccaggctcaggcctatca-----tagcctgacctggcctattc 31519153  T
Q  116 ccaacccta 124  Q
    |||||||||    
T  31519152 ccaacccta 31519144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 32983265 - 32983325
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||||||| |||||| ||||||||| ||  |||||||||||||||||||| |||||    
T  32983265 tttcgtaggccaggctcaggcctatcaaagcctaacctggcctggcctattcccaccccta 32983325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 44710137 - 44710077
Alignment:
Q  64 tttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||||| || |||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  44710137 tttcgtaggcgaggctcaggcctatcaaagtctggtctgacctggcctattcccatcccta 44710077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 36918697 - 36918609
Alignment:
Q  36 cataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| |||||||| |  ||||||| ||||  ||||| || |||| | |||||||||||| || |||||||||||||||| |||||||    
T  36918697 cataggtcaggctcaagcttgcaaatttttttataggcgaggctcatgcctatcaaagtctagcttggcctggcctattcctaacccta 36918609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 30577077 - 30577038
Alignment:
Q  85 ctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  30577077 ctatcaaagcctggcctgccctggcctattcccaacccta 30577038  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 16383948 - 16383984
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcagg 52  Q
    |||||||| |||||||||| |||||||||||||||||    
T  16383948 aaaataggcctatgaaaggccataggccaggctcagg 16383984  T

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Target: scaffold0067 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 14355 - 14464
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||  |||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  14355 aaaataggcctatgaaaggacatagggcaggctcaggcctgcaaaaattttcgtaggccagactcaggcctatcaaagcctggcctgacctggcctattc 14454  T
Q  116 ccaaccctag 125  Q
    ||||||||||    
T  14455 ccaaccctag 14464  T

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Target: scaffold0065 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 40082 - 39972
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattc 115  Q
    |||||||| |||||||||| ||||||||||||||||| |||||| | |||||||||||||| |||| | ||||||||| ||| ||||| |||||||||||    
T  40082 aaaataggcctatgaaaggccataggccaggctcaggcctgcaatttttttcgtaggccaggctcaagcctatcaaagcctgacctggtctggcctattc 39983  T
Q  116 ccaaccctagt 126  Q
    |||||||||||    
T  39982 ccaaccctagt 39972  T

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Target: scaffold0886 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 1812 - 1888
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcct 101  Q
    |||||| ||| ||||||||||||||||| ||| |||| |||||||||||||| |||||| ||||||||| |||||||    
T  1812 ctatgataggccataggccaggctcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcct 1888  T

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Target: scaffold0275 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 9250 - 9151
Alignment:
Q  25 ctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||| |||||||||||||||||||||  ||  | |  ||| ||||||||| |||||| ||||||||| |||| ||||||||||||||||||| |||||    
T  9250 ctatgataggtcataggccaggctcaggcttgtgatttattttgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccaccccta 9151  T

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Target: scaffold1625 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 1316 - 1216
Alignment:
Q  19 ataggtctatgaaaggtcataggccaggctcaggtctgcaaatcttttcgtaggccagcctcaggtctatcaaagtctggcctggcctggcctattccca 118  Q
    ||||| |||||||||| |||||||||||||| || |||||||   || |||||||||| |||||  ||||||||     |||||||||| ||||||||||    
T  1316 ataggcctatgaaaggccataggccaggctctggcctgcaaaaaattccgtaggccaggctcagacctatcaaa-----gcctggcctgacctattccca 1222  T
Q  119 acccta 124  Q
    ||||||    
T  1221 acccta 1216  T

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Target: scaffold0217 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 15378 - 15338
Alignment:
Q  85 ctatcaaagtctggcctggcctggcctattcccaaccctag 125  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15378 ctatcaaagtctggcctggcctagcctattcccaaccctag 15338  T

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Target: scaffold0217; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 15673 - 15628
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcaggtctgcaaat 61  Q
    |||||||| |||||||||| ||||||||||||||||  ||||||||    
T  15673 aaaataggcctatgaaaggccataggccaggctcagccctgcaaat 15628  T

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Target: scaffold0422 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 10692 - 10638
Alignment:
Q  70 aggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||||| |||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  10692 aggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 10638  T

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Target: scaffold1702 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1702
Description:

Target: scaffold1702; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 1 - 53
Alignment:
Q  72 gccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    ||||| |||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  1 gccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 53  T

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Target: scaffold0259 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 24885 - 24849
Alignment:
Q  16 aaaataggtctatgaaaggtcataggccaggctcagg 52  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24885 aaaataggtctatgaaaggccataggccaggctcagg 24849  T

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Target: scaffold0259; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 24863 - 24808
Alignment:
Q  69 taggccagcctcaggtctatcaaagtctggcctggcctggcctattcccaacccta 124  Q
    |||||||| ||||||  |||||||| ||||| ||| ||||||||||||||||||||    
T  24863 taggccaggctcaggcttatcaaagcctggcttggtctggcctattcccaacccta 24808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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