View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5812_low_7 (Length: 243)
Name: NF5812_low_7
Description: NF5812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5812_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 30604771 - 30604988
Alignment:
| Q |
1 |
cggcaacacgcaactgcattgtttatgtttagctagtactacattctaagcacgtggctgcattaaatannnnnnnnnnnnnnnctctacgtatttatgt |
100 |
Q |
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| T |
30604771 |
cggcaacacgcaactgcattgtttatgtttagctagtactacattctaagcacgtggctgcattaaatattttttatgttttttctctacgtatttatgt |
30604870 |
T |
|
| Q |
101 |
aaaggtgaattaataataaatttaaaacttaaatcaatactgtaaatacttctcctttaaatcatggaaagaaataaaatgagttccaatctcgggaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
30604871 |
aaaggtgaattaataataaatttaaaacttaaatcaata-----aatacttctcctttaaatcatggaaacaaataaaatgagttccaatctcgggaaag |
30604965 |
T |
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| Q |
201 |
aagaaaatgtacgtaagcatcta |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
30604966 |
aagaaaatgtacgtaagcatcta |
30604988 |
T |
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