View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5813_low_30 (Length: 274)
Name: NF5813_low_30
Description: NF5813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5813_low_30 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 41861093 - 41860854
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
41861093 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
41860995 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41860994 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtgtt |
41860901 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
41860900 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
41860854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 52681237 - 52681476
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
52681237 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
52681335 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
52681336 |
tcattatgtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaaacattgttattgtgtt |
52681429 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
52681430 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
52681476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 14995700 - 14995461
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14995700 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
14995602 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
14995601 |
tcattaagtatgtaacaaacagggctccacagtgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtgtt |
14995508 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14995507 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
14995461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 22005484 - 22005723
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22005484 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
22005582 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22005583 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtgtt |
22005676 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
22005677 |
aacattgagaagaaaaatcaaatggatttttacctgctcctcctctt |
22005723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 7892260 - 7892499
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7892260 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgctaaaattattagctt-atcttacaatggaattgatttaattaattaat |
7892358 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |
|
|
| T |
7892359 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaaacattgttgttgtgtt |
7892452 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7892453 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
7892499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 3599470 - 3599231
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3599470 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctcttactgcgaaatttattagctt-atcttacaatggaattgatttaattaattaat |
3599372 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3599371 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtgtt |
3599278 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
3599277 |
aacattgagaagaaaaatcaaatggatttttagctgatcctcctctt |
3599231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 26950024 - 26950263
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26950024 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
26950122 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
26950123 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttaatgtgtt |
26950216 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26950217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
26950263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 36093023 - 36092784
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36093023 |
atgacttcttcatctcacttcaaaattgcaggtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
36092925 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36092924 |
ttattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtgtt |
36092831 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36092830 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
36092784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 263
Target Start/End: Original strand, 18200372 - 18200492
Alignment:
| Q |
138 |
gggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgttaacattgagaagaaaaatcaa |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18200372 |
gggctccacaatgatttaattgtttcattctaattta----ttttttttgtgtttatatagaagcattgttattgt-ttaacattgagaagaaaaatcaa |
18200466 |
T |
|
| Q |
238 |
atggatttttagctgctcctcttctt |
263 |
Q |
| |
|
||||||||||||||||||||| |||| |
|
|
| T |
18200467 |
atggatttttagctgctcctcctctt |
18200492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 18200299 - 18200362
Alignment:
| Q |
20 |
acttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctt |
83 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
18200299 |
acttcttcatctcacttcaaaattgcaagtgcgttttctctctacatgcgaaaattattagctt |
18200362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 181; Significance: 7e-98; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 26454411 - 26454650
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26454411 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
26454509 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
26454510 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaaacattgttattgtgtt |
26454603 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26454604 |
aacattgacaagaaaaatcaaatggatttttagctgctcctcctctt |
26454650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 40604248 - 40604487
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
40604248 |
atgacttcttcatctcacttcaaaattgcaagtgtgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
40604346 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
40604347 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaaacattgttattgtgtt |
40604440 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
40604441 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
40604487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 13906766 - 13907005
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13906766 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccttgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
13906864 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13906865 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtgtt |
13906958 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||| |||| |
|
|
| T |
13906959 |
aacattgagaagaaaaatcaaatgtatttttacctgctcctcctctt |
13907005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 2046469 - 2046230
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
2046469 |
atgacttattcatctcacttcaaaattgcaagtgtgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
2046371 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgtt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
2046370 |
tcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaaacattgttattgtgtt |
2046277 |
T |
|
| Q |
217 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2046276 |
aacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
2046230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 17 - 263
Target Start/End: Complemental strand, 35596173 - 35595931
Alignment:
| Q |
17 |
atgacttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaattaat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35596173 |
atgacttcttcatctcacttcaaaattgcaagtgcgttttctctctccatacgaaaattattagctt-atcttacaatggaattgatttaattaattaat |
35596075 |
T |
|
| Q |
117 |
tcattaagtatgtaacaaacagggctccacaatga-tttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgt |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
35596074 |
tcattaagtatgtaacaaacagggctccacaatgattttaattgtttcattctaatttta----attttttgtgtttatgtagaagcattgttattgtgt |
35595979 |
T |
|
| Q |
216 |
taacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
35595978 |
taacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
35595931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 176; Significance: 7e-95; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 32673774 - 32674015
Alignment:
| Q |
17 |
atgacttcttcatctc--acttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctttatcttacaatggaattgatttaattaatta |
114 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
32673774 |
atgacttcttcatctctcacttcaaaattgcaggtgcgttttctctctccatgcgaaaattattagctt-atcttacaatggaattgatttaattaatta |
32673872 |
T |
|
| Q |
115 |
attcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtg |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
32673873 |
attcattaagtatgtaacaaacagggctccacaatgatttaattgtttcattctaatttaa------tttttgtgtttatatagaagcattgttattgtg |
32673966 |
T |
|
| Q |
215 |
ttaacattgagaagaaaaatcaaatggatttttagctgctcctcttctt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32673967 |
ttaacattgagaagaaaaatcaaatggatttttagctgctcctcctctt |
32674015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 22636925 - 22636879
Alignment:
| Q |
220 |
attgagaagaaaaatcaaatggatttttagctgctcctcttcttctc |
266 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
22636925 |
attgagaagagaaatcaaatggatttttagttgctcctcctcttctc |
22636879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 138 - 263
Target Start/End: Original strand, 3590222 - 3590344
Alignment:
| Q |
138 |
gggctccacaatgatttaattgtttcattctaatttaannnnnnnnnnngtgtttatatagaagcattgttattgtgttaacattgagaagaaaaatcaa |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3590222 |
gggctccacaatgatttaattgtttcattctaatttatttatttttt---tgtttatatagaagcattgttattgtgttaacattgagaagaaaaatcaa |
3590318 |
T |
|
| Q |
238 |
atggatttttagctgctcctcttctt |
263 |
Q |
| |
|
||||||||||||||||||||| |||| |
|
|
| T |
3590319 |
atggatttttagctgctcctcctctt |
3590344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 3590149 - 3590212
Alignment:
| Q |
20 |
acttcttcatctcacttcaaaattgcaagtgccttttctctctccatgcaaaaattattagctt |
83 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| |
|
|
| T |
3590149 |
acttcttcatctcacttcaaaattgcaagtgcgttttctctttccatgcgaaaattattagctt |
3590212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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