View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5813_low_42 (Length: 235)

Name: NF5813_low_42
Description: NF5813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5813_low_42
NF5813_low_42
[»] chr3 (58 HSPs)
chr3 (6-203)||(7039389-7039586)
chr3 (117-203)||(2908056-2908142)
chr3 (143-203)||(52459454-52459514)
chr3 (116-203)||(7264042-7264129)
chr3 (116-203)||(14588769-14588856)
chr3 (116-203)||(48543722-48543809)
chr3 (117-203)||(54740752-54740838)
chr3 (143-203)||(4017557-4017617)
chr3 (143-203)||(29498964-29499024)
chr3 (143-203)||(45600317-45600377)
chr3 (143-203)||(46756531-46756591)
chr3 (143-203)||(54511427-54511487)
chr3 (143-202)||(22348126-22348185)
chr3 (144-203)||(52673119-52673178)
chr3 (120-203)||(53021603-53021686)
chr3 (117-203)||(13336203-13336289)
chr3 (117-203)||(42189142-42189228)
chr3 (147-203)||(874476-874532)
chr3 (143-203)||(20997263-20997323)
chr3 (143-203)||(26880615-26880675)
chr3 (143-203)||(30270461-30270521)
chr3 (143-203)||(46091044-46091104)
chr3 (143-203)||(12102404-12102464)
chr3 (147-203)||(13448816-13448872)
chr3 (143-203)||(20859581-20859641)
chr3 (143-203)||(36593231-36593291)
chr3 (143-203)||(39720357-39720417)
chr3 (143-203)||(29449291-29449353)
chr3 (152-203)||(33933834-33933885)
chr3 (144-194)||(47718614-47718664)
chr3 (143-201)||(54196911-54196969)
chr3 (146-203)||(19535675-19535732)
chr3 (143-200)||(43317773-43317830)
chr3 (117-203)||(47671390-47671476)
chr3 (116-201)||(35530737-35530822)
chr3 (143-203)||(35907710-35907770)
chr3 (143-203)||(38360808-38360868)
chr3 (143-203)||(44223440-44223500)
chr3 (143-203)||(46089923-46089983)
chr3 (152-203)||(50931825-50931876)
chr3 (147-201)||(15497364-15497418)
chr3 (143-203)||(34435006-34435066)
chr3 (156-203)||(50738271-50738318)
chr3 (156-203)||(50774537-50774584)
chr3 (143-201)||(46851888-46851946)
chr3 (150-191)||(11601912-11601953)
chr3 (150-191)||(19895396-19895437)
chr3 (146-191)||(22474677-22474722)
chr3 (150-191)||(26039738-26039779)
chr3 (150-191)||(28981560-28981601)
chr3 (150-203)||(37411178-37411231)
chr3 (150-191)||(40831672-40831713)
chr3 (146-191)||(48522310-48522355)
chr3 (150-202)||(13166260-13166312)
chr3 (151-191)||(22473944-22473984)
chr3 (150-198)||(32752261-32752309)
chr3 (147-203)||(44763558-44763614)
chr3 (150-194)||(54112427-54112471)
[»] chr7 (50 HSPs)
chr7 (116-203)||(29450100-29450187)
chr7 (117-203)||(12906952-12907038)
chr7 (117-203)||(40788144-40788230)
chr7 (143-203)||(23640473-23640533)
chr7 (143-203)||(32961880-32961940)
chr7 (143-203)||(45619276-45619336)
chr7 (118-203)||(17276760-17276845)
chr7 (143-203)||(18957647-18957707)
chr7 (143-203)||(40241292-40241352)
chr7 (143-203)||(41425601-41425661)
chr7 (116-200)||(44550249-44550333)
chr7 (146-203)||(23153748-23153805)
chr7 (143-203)||(4493277-4493337)
chr7 (143-203)||(5482542-5482602)
chr7 (143-203)||(5484799-5484859)
chr7 (143-203)||(22345783-22345842)
chr7 (147-203)||(43154836-43154892)
chr7 (144-203)||(10998073-10998132)
chr7 (143-201)||(4409334-4409392)
chr7 (146-203)||(4409729-4409786)
chr7 (150-203)||(6605704-6605757)
chr7 (117-203)||(37670649-37670735)
chr7 (146-203)||(38044102-38044159)
chr7 (143-203)||(4410651-4410711)
chr7 (143-203)||(5525199-5525259)
chr7 (147-203)||(47839822-47839878)
chr7 (117-203)||(4407627-4407713)
chr7 (117-203)||(27032188-27032274)
chr7 (143-203)||(8791070-8791130)
chr7 (143-203)||(21135555-21135615)
chr7 (143-203)||(43110214-43110274)
chr7 (147-201)||(37311308-37311362)
chr7 (119-203)||(16934360-16934441)
chr7 (119-203)||(16939743-16939824)
chr7 (146-203)||(40036948-40037005)
chr7 (143-203)||(4613987-4614047)
chr7 (150-194)||(20136307-20136351)
chr7 (143-203)||(41344224-41344284)
chr7 (143-203)||(47138856-47138915)
chr7 (143-201)||(44652798-44652856)
chr7 (146-191)||(3792517-3792562)
chr7 (156-193)||(4495219-4495256)
chr7 (150-191)||(9144850-9144891)
chr7 (150-191)||(29683860-29683901)
chr7 (150-191)||(48529703-48529744)
chr7 (151-191)||(3791781-3791821)
chr7 (143-203)||(4409608-4409668)
chr7 (146-190)||(21893556-21893600)
chr7 (147-203)||(36758890-36758946)
chr7 (147-203)||(36764658-36764714)
[»] chr4 (55 HSPs)
chr4 (116-203)||(10139262-10139349)
chr4 (116-203)||(13892382-13892469)
chr4 (143-203)||(7364423-7364483)
chr4 (143-203)||(11968063-11968123)
chr4 (143-203)||(17549018-17549078)
chr4 (143-203)||(53273263-53273323)
chr4 (116-203)||(17622835-17622922)
chr4 (143-203)||(1165213-1165273)
chr4 (143-203)||(6940964-6941024)
chr4 (143-203)||(11199475-11199535)
chr4 (143-203)||(34662816-34662876)
chr4 (147-203)||(40949583-40949639)
chr4 (143-203)||(55210122-55210182)
chr4 (143-203)||(55990787-55990847)
chr4 (143-201)||(27289860-27289918)
chr4 (116-202)||(45020222-45020308)
chr4 (143-203)||(8150306-8150366)
chr4 (143-203)||(10582825-10582885)
chr4 (147-203)||(28118531-28118587)
chr4 (143-203)||(39656818-39656878)
chr4 (143-203)||(46047070-46047130)
chr4 (143-203)||(51152653-51152713)
chr4 (152-203)||(55187142-55187193)
chr4 (143-201)||(2414292-2414350)
chr4 (116-203)||(49908890-49908977)
chr4 (146-203)||(14639466-14639523)
chr4 (150-203)||(26108909-26108962)
chr4 (150-203)||(48512018-48512071)
chr4 (143-203)||(7401200-7401260)
chr4 (143-203)||(41145414-41145474)
chr4 (143-203)||(51186768-51186828)
chr4 (144-202)||(32201827-32201885)
chr4 (146-203)||(40848878-40848935)
chr4 (147-203)||(36191108-36191164)
chr4 (146-201)||(13859434-13859489)
chr4 (146-201)||(43116604-43116659)
chr4 (156-202)||(7404192-7404238)
chr4 (143-201)||(20680292-20680350)
chr4 (144-194)||(41104659-41104709)
chr4 (150-203)||(347502-347555)
chr4 (143-203)||(23627372-23627433)
chr4 (143-203)||(18137422-18137482)
chr4 (143-203)||(49124630-49124690)
chr4 (147-201)||(18003332-18003386)
chr4 (146-191)||(577603-577648)
chr4 (147-203)||(11180007-11180064)
chr4 (150-191)||(17730732-17730773)
chr4 (150-203)||(29100554-29100607)
chr4 (150-191)||(33505925-33505966)
chr4 (146-191)||(35711002-35711047)
chr4 (146-191)||(35715312-35715357)
chr4 (150-191)||(35716043-35716084)
chr4 (156-201)||(37874505-37874550)
chr4 (151-191)||(578348-578388)
chr4 (143-199)||(32136525-32136581)
[»] chr5 (45 HSPs)
chr5 (117-203)||(666620-666706)
chr5 (117-203)||(29384832-29384918)
chr5 (143-202)||(25819774-25819833)
chr5 (116-203)||(24029242-24029329)
chr5 (116-203)||(24757985-24758072)
chr5 (146-203)||(6930201-6930258)
chr5 (143-203)||(5590522-5590582)
chr5 (143-203)||(26378173-26378233)
chr5 (143-203)||(27178045-27178105)
chr5 (147-203)||(31885705-31885761)
chr5 (143-203)||(31940888-31940948)
chr5 (143-203)||(42321259-42321319)
chr5 (143-194)||(32263357-32263408)
chr5 (120-201)||(16051830-16051911)
chr5 (143-203)||(16167184-16167244)
chr5 (147-201)||(34442363-34442417)
chr5 (116-194)||(2476594-2476672)
chr5 (146-203)||(4375899-4375956)
chr5 (147-203)||(16939492-16939548)
chr5 (143-203)||(40306949-40307009)
chr5 (143-203)||(42112657-42112717)
chr5 (147-203)||(43395596-43395652)
chr5 (156-203)||(20338865-20338912)
chr5 (31-82)||(39466597-39466648)
chr5 (150-203)||(42415790-42415843)
chr5 (143-203)||(19358415-19358474)
chr5 (147-203)||(37146151-37146207)
chr5 (143-194)||(10041892-10041943)
chr5 (143-200)||(3244578-3244635)
chr5 (150-203)||(30511236-30511289)
chr5 (150-203)||(30551576-30551629)
chr5 (146-198)||(3025686-3025738)
chr5 (143-203)||(7535742-7535802)
chr5 (147-203)||(19227519-19227575)
chr5 (143-203)||(39804027-39804087)
chr5 (156-203)||(15976695-15976742)
chr5 (144-203)||(36241420-36241479)
chr5 (157-203)||(2529174-2529220)
chr5 (150-191)||(9813718-9813759)
chr5 (146-191)||(12591476-12591521)
chr5 (150-191)||(12705843-12705884)
chr5 (150-191)||(18042991-18043032)
chr5 (150-194)||(791046-791090)
chr5 (151-191)||(12592213-12592253)
chr5 (143-203)||(29383527-29383587)
[»] scaffold0179 (1 HSPs)
scaffold0179 (117-202)||(33822-33907)
[»] chr2 (41 HSPs)
chr2 (118-203)||(8876741-8876826)
chr2 (116-203)||(3325649-3325736)
chr2 (116-203)||(36579550-36579637)
chr2 (146-203)||(13552827-13552884)
chr2 (143-203)||(18171083-18171143)
chr2 (143-203)||(31970902-31970962)
chr2 (143-201)||(21843648-21843706)
chr2 (117-203)||(969098-969184)
chr2 (117-203)||(36581851-36581937)
chr2 (143-203)||(7273757-7273817)
chr2 (143-203)||(17052075-17052135)
chr2 (143-203)||(24927141-24927201)
chr2 (117-203)||(5165204-5165290)
chr2 (117-203)||(36079930-36080016)
chr2 (143-203)||(669264-669324)
chr2 (143-203)||(6034744-6034804)
chr2 (143-203)||(22077300-22077360)
chr2 (143-203)||(35422875-35422935)
chr2 (143-201)||(38708814-38708872)
chr2 (147-203)||(1834663-1834719)
chr2 (147-203)||(7228657-7228713)
chr2 (147-203)||(34911739-34911795)
chr2 (143-203)||(36087021-36087081)
chr2 (147-203)||(38961267-38961323)
chr2 (143-203)||(45473549-45473609)
chr2 (143-201)||(3244436-3244494)
chr2 (120-203)||(2179119-2179202)
chr2 (143-203)||(4630277-4630338)
chr2 (146-203)||(9922450-9922507)
chr2 (143-203)||(32291497-32291557)
chr2 (143-203)||(38878220-38878280)
chr2 (147-203)||(41451683-41451739)
chr2 (31-82)||(6452967-6453018)
chr2 (147-201)||(20642870-20642924)
chr2 (150-191)||(9545565-9545606)
chr2 (146-191)||(9919932-9919977)
chr2 (150-191)||(10049934-10049975)
chr2 (150-191)||(10823532-10823573)
chr2 (151-191)||(9920653-9920693)
chr2 (143-203)||(10119696-10119755)
chr2 (38-74)||(29463224-29463260)
[»] chr8 (37 HSPs)
chr8 (119-203)||(16242259-16242343)
chr8 (116-203)||(7217992-7218079)
chr8 (120-203)||(36217954-36218037)
chr8 (143-203)||(27466376-27466436)
chr8 (116-203)||(34804397-34804484)
chr8 (121-203)||(45499652-45499734)
chr8 (143-203)||(29570580-29570640)
chr8 (147-203)||(43819359-43819415)
chr8 (143-203)||(44604423-44604483)
chr8 (147-203)||(14717906-14717962)
chr8 (147-203)||(17314639-17314695)
chr8 (143-203)||(36060191-36060251)
chr8 (143-203)||(41359958-41360018)
chr8 (117-201)||(39684355-39684439)
chr8 (116-203)||(17047064-17047151)
chr8 (143-201)||(44907565-44907623)
chr8 (146-203)||(39994961-39995018)
chr8 (146-203)||(40049633-40049690)
chr8 (143-203)||(6656539-6656599)
chr8 (143-203)||(6736941-6737001)
chr8 (143-203)||(12261864-12261924)
chr8 (143-203)||(16843974-16844034)
chr8 (143-203)||(41525408-41525468)
chr8 (143-194)||(35003256-35003307)
chr8 (143-201)||(38139685-38139743)
chr8 (143-203)||(6746246-6746306)
chr8 (145-201)||(34996622-34996678)
chr8 (144-203)||(38138493-38138552)
chr8 (143-201)||(14451422-14451480)
chr8 (146-203)||(42843472-42843529)
chr8 (147-203)||(12262242-12262297)
chr8 (158-201)||(39486953-39486996)
chr8 (116-203)||(11923353-11923440)
chr8 (150-191)||(2964934-2964975)
chr8 (150-191)||(3749864-3749905)
chr8 (143-203)||(42983087-42983147)
chr8 (143-191)||(45298018-45298066)
[»] chr6 (23 HSPs)
chr6 (116-203)||(3849158-3849245)
chr6 (143-203)||(557566-557626)
chr6 (143-203)||(32244090-32244150)
chr6 (143-203)||(18595532-18595592)
chr6 (143-203)||(19988016-19988076)
chr6 (147-203)||(20790195-20790251)
chr6 (143-203)||(26183524-26183584)
chr6 (143-203)||(29975427-29975487)
chr6 (143-200)||(29042330-29042387)
chr6 (143-203)||(1949458-1949518)
chr6 (147-203)||(17504576-17504632)
chr6 (157-203)||(6019394-6019440)
chr6 (143-201)||(33946762-33946820)
chr6 (157-203)||(34248675-34248721)
chr6 (146-203)||(29858561-29858618)
chr6 (156-203)||(10944831-10944878)
chr6 (147-203)||(34207945-34208001)
chr6 (150-203)||(6832537-6832590)
chr6 (150-203)||(24160538-24160591)
chr6 (150-191)||(28193196-28193237)
chr6 (150-191)||(34317236-34317277)
chr6 (150-191)||(35133475-35133516)
chr6 (150-198)||(9980997-9981045)
[»] scaffold0020 (1 HSPs)
scaffold0020 (143-203)||(123726-123786)
[»] chr1 (54 HSPs)
chr1 (144-203)||(11582120-11582179)
chr1 (115-203)||(17247990-17248078)
chr1 (116-203)||(33641218-33641305)
chr1 (116-203)||(40433588-40433675)
chr1 (116-203)||(43122157-43122244)
chr1 (117-203)||(25661187-25661273)
chr1 (146-203)||(33825552-33825609)
chr1 (146-203)||(33878624-33878681)
chr1 (143-203)||(3263787-3263847)
chr1 (143-203)||(7830578-7830638)
chr1 (143-203)||(17584535-17584595)
chr1 (143-203)||(33375207-33375267)
chr1 (143-203)||(33896588-33896648)
chr1 (143-203)||(41902741-41902801)
chr1 (143-203)||(51834995-51835055)
chr1 (116-203)||(33931994-33932081)
chr1 (143-203)||(24474471-24474531)
chr1 (143-203)||(34077402-34077462)
chr1 (143-203)||(36166563-36166623)
chr1 (143-203)||(37824967-37825027)
chr1 (143-203)||(39328102-39328162)
chr1 (118-203)||(39730119-39730204)
chr1 (117-203)||(17367317-17367403)
chr1 (143-203)||(49570306-49570366)
chr1 (144-203)||(9573820-9573879)
chr1 (147-202)||(11755259-11755314)
chr1 (143-202)||(44825213-44825272)
chr1 (143-202)||(45102819-45102878)
chr1 (143-194)||(51039029-51039080)
chr1 (116-203)||(8946939-8947026)
chr1 (150-203)||(43120078-43120131)
chr1 (143-203)||(1323441-1323501)
chr1 (143-203)||(31222478-31222538)
chr1 (147-203)||(38799232-38799288)
chr1 (150-193)||(45588190-45588233)
chr1 (143-201)||(16095969-16096027)
chr1 (143-201)||(43123336-43123394)
chr1 (156-201)||(11603683-11603728)
chr1 (143-200)||(21966942-21966999)
chr1 (143-196)||(23615905-23615958)
chr1 (150-191)||(34222969-34223010)
chr1 (143-194)||(23647238-23647289)
chr1 (156-203)||(36953576-36953623)
chr1 (156-203)||(39880048-39880095)
chr1 (157-203)||(34651393-34651439)
chr1 (150-191)||(10697895-10697936)
chr1 (150-191)||(16034378-16034419)
chr1 (150-191)||(19401032-19401073)
chr1 (146-191)||(29843886-29843931)
chr1 (146-191)||(42679411-42679456)
chr1 (150-191)||(52306368-52306409)
chr1 (151-191)||(10766491-10766531)
chr1 (151-191)||(29844625-29844665)
chr1 (151-191)||(42678677-42678717)
[»] scaffold0684 (1 HSPs)
scaffold0684 (143-201)||(1935-1993)
[»] scaffold0166 (1 HSPs)
scaffold0166 (116-203)||(464-551)
[»] scaffold0710 (1 HSPs)
scaffold0710 (143-203)||(94-154)
[»] scaffold0481 (1 HSPs)
scaffold0481 (143-203)||(4287-4347)
[»] scaffold0178 (1 HSPs)
scaffold0178 (143-203)||(8347-8407)
[»] scaffold0037 (1 HSPs)
scaffold0037 (116-203)||(5526-5613)
[»] scaffold0024 (2 HSPs)
scaffold0024 (143-201)||(91769-91827)
scaffold0024 (147-203)||(111425-111481)
[»] scaffold0005 (1 HSPs)
scaffold0005 (146-203)||(177769-177826)
[»] scaffold0198 (1 HSPs)
scaffold0198 (143-201)||(18022-18080)
[»] scaffold0237 (1 HSPs)
scaffold0237 (146-203)||(4764-4821)
[»] scaffold0003 (1 HSPs)
scaffold0003 (117-191)||(227717-227791)
[»] scaffold1793 (1 HSPs)
scaffold1793 (156-202)||(1237-1283)
[»] scaffold0045 (1 HSPs)
scaffold0045 (146-191)||(18619-18664)
[»] scaffold0385 (1 HSPs)
scaffold0385 (151-191)||(8043-8083)
[»] scaffold0006 (1 HSPs)
scaffold0006 (150-198)||(157710-157758)
[»] scaffold0002 (1 HSPs)
scaffold0002 (150-202)||(140676-140728)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 203
Target Start/End: Original strand, 7039389 - 7039586
Alignment:
Q  6 acattgtacaccaaataatgtacactgtacaccaaacatgtgatatgataaaataatgctattatcttttatatcatggatcagtttggtaacaccgaaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  7039389 acattgtacaccaaataatgtacactgtacaccaaacatgtgatatgataaaataatgctattatcttttatatcaggggtctgtttggtaacaccgaaa 7039488  T
Q  106 aaagagtttataggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7039489 aaagagtttataggtaccgtttgacccggttttttttcagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacattcg 7039586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 2908056 - 2908142
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  2908056 aggtaccgtttggcccgactttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 2908142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 52459454 - 52459514
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  52459454 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 52459514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 7264042 - 7264129
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       ||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  7264042 taggtaccgtttggcccggctttttttcagcttttctacgtttttaagaagaagataggccaaacacaatatcaataaagtaccttcg 7264129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 14588856 - 14588769
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| |||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  14588856 taggtaccgtttggtccggctatttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 14588769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 48543722 - 48543809
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       ||| |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  48543722 taggtaccgtttggcccggctttttttcagtttttttacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 48543809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 54740752 - 54740838
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  54740752 aggtaccgtttggcccggttttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 54740838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 4017557 - 4017617
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  4017557 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 4017617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 29498964 - 29499024
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  29498964 cagcttttctacgtttttaaggagaaactaggccaaacacaatatcaataaagtaccttcg 29499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 45600377 - 45600317
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  45600377 cagcttttctaagtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 45600317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 46756531 - 46756591
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  46756531 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 46756591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 54511487 - 54511427
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  54511487 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 54511427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 22348185 - 22348126
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  22348185 cagcttttctacgtttttaaggagaagttaggccaaatacaatatcaataaaataccttc 22348126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 52673119 - 52673178
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  52673119 agcttttctacgtttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 52673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 53021603 - 53021686
Alignment:
Q  120 taccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||       ||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  53021603 taccgtttggcccggctttttttcagcttttctaagtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 53021686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 13336203 - 13336289
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       |||||| ||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  13336203 aggtaccgtttggcccggctttttttcagcttctctacatttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 13336289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 42189228 - 42189142
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||| |||||       |||||| |||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  42189228 aggtaccgtttggtccggcttttttccagcttctctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 42189142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 874476 - 874532
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  874476 ttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtatcttcg 874532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 20997323 - 20997263
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  20997323 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 20997263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 26880615 - 26880675
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  26880615 cagcttttttacgtttttaaggagaagttaggtcaaacacaatatcaataaaataccttcg 26880675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 30270521 - 30270461
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  30270521 cagcttttctacatttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 30270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 46091104 - 46091044
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  46091104 cagcttctctacatttttaaggagaagctaggtcaaacacaatatcaataaaataccttcg 46091044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 12102464 - 12102404
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| |||||  |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  12102464 cagcttctctacaattttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 12102404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 13448816 - 13448872
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||    
T  13448816 ttttctacgtttttaaggagaagctaggtcaaacacaatatccataaagtaccttcg 13448872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 20859641 - 20859581
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  20859641 cagcttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 20859581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 36593291 - 36593231
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  36593291 cagcttttctacatttttaaggagaaactaggacaaacacaatatcaataaagtaccttcg 36593231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 39720357 - 39720417
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || |||||| |||||||||||||| ||||||||    
T  39720357 cagcttttctacatttttaaggagaagttaggccaaagacaatatcaataaagtaccttcg 39720417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 29449291 - 29449353
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacaca--atatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||||||| ||||||||||  ||||||||||| ||||||||    
T  29449291 cagcttttctacatttttaaggagaagctaggccaaacacactatatcaataaagtaccttcg 29449353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 33933885 - 33933834
Alignment:
Q  152 tacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  33933885 tacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 33933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 47718614 - 47718664
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  47718614 agcttttctacatttttaaggagaagctaggccaaacaccatatcaataaa 47718664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 54196969 - 54196911
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| ||||| |||||||||||||| || |||||||||||||| |||||||||||||    
T  54196969 cagcttctctacatttttaaggagaagttaggccaaacacaatatgaataaaatacctt 54196911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 19535675 - 19535732
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| |||||||||||||| || |||||||||||||||| |||| ||||||||    
T  19535675 cttttctacatttttaaggagaagttaggccaaacacaatatcactaaagtaccttcg 19535732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 43317830 - 43317773
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacct 200  Q
    |||||| ||||  |||||||||||||| || |||||||||||||||||||||||||||    
T  43317830 cagcttctctatatttttaaggagaagttaggccaaacacaatatcaataaaatacct 43317773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 47671476 - 47671390
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       |||||||| ||| ||||||| |||||| || ||||||||||||||||||||| ||||||||    
T  47671476 aggtaccgtttggcccgactttttttcagcttttgtacatttttaaagagaagttaggccaaacacaatatcaataaagtaccttcg 47671390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 35530822 - 35530737
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||||||||||||||||       |||||| ||||  |||||||||||||| ||  |||||||||||||||||||| ||||||    
T  35530822 taggtaccgtttggcccggctttttttcagcttctctatatttttaaggagaagttagaccaaacacaatatcaataaagtacctt 35530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 35907770 - 35907710
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || | ||||||||||||||||||| ||||||||    
T  35907770 cagcttctctacatttttaaggagaagttaggtcaaacacaatatcaataaagtaccttcg 35907710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 38360808 - 38360868
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||| ||| |||||||| ||||||||||||||||||||| || |||||    
T  38360808 cagcttttctacattttaaagtagaagctaggccaaacacaatatcaataaagtatcttcg 38360868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 44223440 - 44223500
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| |||| ||||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  44223440 cagcttctctaagtttttaagaagaagttaggccaaacacaatatcaataaagtaccttcg 44223500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 46089983 - 46089923
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||  ||||||||||||||||||||| | ||||||    
T  46089983 cagcttctctacatttttaaggagaagctgggccaaacacaatatcaataaagttccttcg 46089923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 50931825 - 50931876
Alignment:
Q  152 tacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||| || | ||||||||||||||||||| ||||||||    
T  50931825 tacgtttttaaggagaagttaggtcaaacacaatatcaataaagtaccttcg 50931876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 15497418 - 15497364
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||||| ||||||    
T  15497418 ttttttacatttttaaggagaagctaggtcaaacacaatatcaataaagtacctt 15497364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 34435066 - 34435006
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || ||||||| ||||||||||||  ||||||||    
T  34435066 cagcttctctacatttttaaggagaagttaagccaaacgcaatatcaataatgtaccttcg 34435006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 50738271 - 50738318
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||||    
T  50738271 tttttaaggagaagctagaccaaacacaatattaataaagtaccttcg 50738318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 50774584 - 50774537
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||||    
T  50774584 tttttaaggagaagctagaccaaacacaatattaataaagtaccttcg 50774537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 46851946 - 46851888
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| ||||  |||||||||||||| || |||| |||||||||||||||| ||||||    
T  46851946 cagcttctctatatttttaaggagaagttaggccacacacaatatcaataaagtacctt 46851888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 11601953 - 11601912
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  11601953 tctacatttttaaggagaagttaggccaaacacaatatcaat 11601912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 19895437 - 19895396
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  19895437 tctacatttttaaggagaagttaggccaaacacaatatcaat 19895396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 22474677 - 22474722
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  22474677 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 22474722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 26039779 - 26039738
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||||||||||||||||||| || ||||||| ||||||||||    
T  26039779 tctacgtttttaaggagaagttaggccaaacgcaatatcaat 26039738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 28981601 - 28981560
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  28981601 tctacatttttaaggagaagttaggccaaacacaatatcaat 28981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 37411178 - 37411231
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| |||||||||||||| || | |||||||||||| |||||| ||||||||    
T  37411178 tctacatttttaaggagaagttaggtcaaacacaatattaataaagtaccttcg 37411231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 40831713 - 40831672
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  40831713 tctacatttttaaggagaagttaggccaaacacaatatcaat 40831672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 48522355 - 48522310
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||| ||||| || ||||||||||||||||||    
T  48522355 cttttctacatttttaagaagaagttaggccaaacacaatatcaat 48522310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 13166312 - 13166260
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    ||||| |||| ||||||||| || | ||||||||||||||||||| |||||||    
T  13166312 tctacattttcaaggagaagttaggacaaacacaatatcaataaagtaccttc 13166260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 22473944 - 22473984
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  22473944 ctacatttttaaggagaagttaggccaaacacaatatcaat 22473984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 32752261 - 32752309
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaatac 198  Q
    ||||| |||||||||||||| || |||||||||| ||||||| ||||||    
T  32752261 tctacatttttaaggagaagttaggccaaacacagtatcaattaaatac 32752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 44763614 - 44763558
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||| ||| |||||||||| ||| || | ||||||||||||||||||| ||||||||    
T  44763614 ttttttacatttttaaggaaaagttaggtcaaacacaatatcaataaagtaccttcg 44763558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 54112427 - 54112471
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    ||||| |||||||||||||| || || ||||||||||||||||||    
T  54112427 tctacatttttaaggagaagttaggcgaaacacaatatcaataaa 54112471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 29450187 - 29450100
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  29450187 taggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 29450100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 12906952 - 12907038
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  12906952 aggtaccgtttggcccggctttttttcagcttttctaagtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 12907038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 40788144 - 40788230
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  40788144 aggtaccgtttggcccggctttttttcagcttttttacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 40788230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 23640533 - 23640473
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23640533 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 23640473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 32961940 - 32961880
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  32961940 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 32961880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 45619276 - 45619336
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  45619276 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 45619336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 17276760 - 17276845
Alignment:
Q  118 ggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||       ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  17276760 ggtaccgtttggcccggctttttttcagcttttctaagtttttaaggagaagctaggccaaacacaatatcaataaagtaacttcg 17276845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 18957707 - 18957647
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  18957707 cagcttttctacgtttttaaggagaagctaggccaaacacaatttcaataaagtaccttcg 18957647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 40241352 - 40241292
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  40241352 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 40241292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 41425601 - 41425661
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  41425601 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 41425661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 44550249 - 44550333
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacct 200  Q
    ||||||||||||||||||||       |||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  44550249 taggtaccgtttggcccggcttttttccagcttctctacatttttaaggagaagctgggccaaacacaatatcaataaaatacct 44550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 23153748 - 23153805
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23153748 cttttctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 23153805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 4493337 - 4493277
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  4493337 cagcttttctacatttttaaggagaagataggccaaacacaatatcaataaagtaccttcg 4493277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 5482542 - 5482602
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  5482542 cagcttttctacatttttaagaagaagctaggccaaacacaatatcaataaagtaccttcg 5482602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 5484859 - 5484799
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  5484859 cagcttctctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 5484799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 22345842 - 22345783
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  22345842 cagcttttctacgtttttaaggagaagctaggcc-aacacaatatcaataaagtaccttcg 22345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 43154836 - 43154892
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  43154836 ttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 43154892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 10998073 - 10998132
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  10998073 agcttttctaagtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 10998132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 4409392 - 4409334
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  4409392 cagcttctctacgtttttaaggagaagttagaccaaacacaatatcaataaaatacctt 4409334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 4409729 - 4409786
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| || |||||    
T  4409729 cttttctacgtttttaaggagaagctagaccaaacacaatatcaataaagtatcttcg 4409786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 6605704 - 6605757
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  6605704 tctacgtttttaaggagaagctaggccaaacacaatattaataaagtaccttcg 6605757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 37670735 - 37670649
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       ||||||||||||  ||||||||||||||||  |||||||||||||||||||| ||||||||    
T  37670735 aggtaccgtttggcccgactttttttcagcttttctacaattttaaggagaagctagaccaaacacaatatcaataaagtaccttcg 37670649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 38044102 - 38044159
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||    
T  38044102 cttttctacgtttttaaggagaagttaggccaaatacaatatcaataaagtaccttcg 38044159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 4410711 - 4410651
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || |||||||||||||| |||||| ||||||||    
T  4410711 cagcttttctacatttttaaggagaagttaggccaaacacaatattaataaagtaccttcg 4410651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 5525199 - 5525259
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  5525199 cagcttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 5525259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 47839822 - 47839878
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  47839822 ttttctacatttttaaggagaagctaggccaaacacaatatcaataaagtacattcg 47839878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 4407713 - 4407627
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       |||||| ||||| |||||||||||||| || | ||||||||||||||||||| ||||||||    
T  4407713 aggtaccgtttggcccgactttttttcagcttctctacatttttaaggagaagttaggtcaaacacaatatcaataaagtaccttcg 4407627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 27032274 - 27032188
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       ||| |||||||||||||||| |||||| || | ||||||||||||||||||| ||||||||    
T  27032274 aggtaccgtttggcccgactttttttcagtttttctacgtttttaaagagaagttaagtcaaacacaatatcaataaagtaccttcg 27032188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 8791070 - 8791130
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||| ||| || |||||||| |||||||||||| || |||||    
T  8791070 cagcttttctacgtttttaaggaaaagttaggccaaacataatatcaataaagtatcttcg 8791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 21135615 - 21135555
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||| |||||||||  |||||||||||||||||||| ||||||||    
T  21135615 cagcttctctacatttttaaagagaagctagaccaaacacaatatcaataaagtaccttcg 21135555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 43110214 - 43110274
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||  ||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  43110214 cagcttttctacaattttaagaagaagttaggccaaacacaatatcaataaagtaccttcg 43110274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 37311362 - 37311308
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| | |||||||||||||| || ||||||||||||||||||||| ||||||    
T  37311362 ttttctgcatttttaaggagaagttaggccaaacacaatatcaataaagtacctt 37311308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 16934441 - 16934360
Alignment:
Q  119 gtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||       |||||| ||||| ||||||||   |||||| ||||||||||||||||||||| ||||||||    
T  16934441 gtaccgtttggcccggctttttttcagcttctctacatttttaag---aagctaggccaaacacaatatcaataaagtaccttcg 16934360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 16939824 - 16939743
Alignment:
Q  119 gtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||       |||||| ||||| ||||||||   |||||| ||||||||||||||||||||| ||||||||    
T  16939824 gtaccgtttggcccggctttttttcagcttctctacatttttaag---aagctaggccaaacacaatatcaataaagtaccttcg 16939743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 40037005 - 40036948
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||| |||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  40037005 cttttttacatttttaagaagaagttaggccaaacacaatatcaataaagtaccttcg 40036948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 4613987 - 4614047
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| | ||||||||| ||||||||||| | |||| |||||||||||||| ||||||||    
T  4613987 cagcttctttacgttttttaggagaagctaagtcaaaaacaatatcaataaagtaccttcg 4614047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 20136351 - 20136307
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  20136351 tctacatttgtaaggagaagctaggccaaacacaatatcaataaa 20136307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 41344284 - 41344224
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| ||| |||||||||||||| || | ||||||||||||||||||| || |||||    
T  41344284 cagcttttttacatttttaaggagaagttaggtcaaacacaatatcaataaagtatcttcg 41344224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 47138856 - 47138915
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||| | || | |||||||||||||||| |||||||||||    
T  47138856 cagcttttctacatttttaaggagatgttaggtcaaacacaatatcaat-aaataccttcg 47138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 44652856 - 44652798
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| |||||  ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  44652856 cagcttctctacaattttaaggagaagttagaccaaacacaatatcaataaagtacctt 44652798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 3792517 - 3792562
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  3792517 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 3792562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 4495256 - 4495219
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataa 193  Q
    |||||||||||||| || ||||||||||||||||||||    
T  4495256 tttttaaggagaagttaggccaaacacaatatcaataa 4495219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 9144850 - 9144891
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  9144850 tctacatttttaaggagaagttaggccaaacacaatatcaat 9144891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 29683901 - 29683860
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  29683901 tctacatttttaaggagaagttaggccaaacacaatatcaat 29683860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 48529744 - 48529703
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  48529744 tctacatttttaaggagaagttaggccaaacacaatatcaat 48529703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 3791781 - 3791821
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  3791781 ctacatttttaaggagaagttaggccaaacacaatatcaat 3791821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 4409608 - 4409668
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || | |||||| ||||| |||||| ||||||||    
T  4409608 cagcttctctacatttttaaggagaagttaggtcaaacataatataaataaagtaccttcg 4409668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 21893556 - 21893600
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaa 190  Q
    ||||||||| |||||||||||||| || | |||||||||||||||    
T  21893556 cttttctacatttttaaggagaagttaggtcaaacacaatatcaa 21893600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 36758890 - 36758946
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||| ||  || |||||||||||||| |||||| ||||||||    
T  36758890 ttttctacatttttaaggaaaaattaggccaaacacaatattaataaagtaccttcg 36758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 36764658 - 36764714
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||| ||  || |||||||||||||| |||||| ||||||||    
T  36764658 ttttctacatttttaaggaaaaattaggccaaacacaatattaataaagtaccttcg 36764714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 10139349 - 10139262
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  10139349 taggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 10139262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 13892469 - 13892382
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||| ||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  13892469 taggtactgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 13892382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 7364423 - 7364483
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  7364423 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 7364483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 11968123 - 11968063
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  11968123 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 11968063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 17549078 - 17549018
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  17549078 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 17549018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 53273263 - 53273323
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  53273263 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 53273323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 17622835 - 17622922
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||| |||       ||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  17622835 taggtaccgtttggcctggctttttttcagtttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 17622922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 1165213 - 1165273
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  1165213 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 1165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 6941024 - 6940964
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  6941024 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtacattcg 6940964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 11199475 - 11199535
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  11199475 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 11199535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 34662816 - 34662876
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  34662816 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 34662876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 40949583 - 40949639
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  40949583 ttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 40949639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 55210182 - 55210122
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  55210182 cagcttttctacgtttttaagaagaagttaggccaaacacaatatcaataaaataccttcg 55210122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 55990787 - 55990847
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  55990787 cagcttttctacgtttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 55990847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 27289918 - 27289860
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  27289918 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtacctt 27289860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 45020308 - 45020222
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    ||||||||||||||||| ||       ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  45020308 taggtaccgtttggcccagctttttttcagcttttctaagtttttaaagagaagctaggccaaacacaatatcaataaagtaccttc 45020222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 8150306 - 8150366
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  8150306 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 8150366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 10582885 - 10582825
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  10582885 cagcttctctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 10582825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 28118587 - 28118531
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  28118587 ttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtatcttcg 28118531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 39656818 - 39656878
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  39656818 cagcttttctacatttttaagaagaagctaggccaaacacaatatcaataaagtaccttcg 39656878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 46047130 - 46047070
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  46047130 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 46047070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 51152653 - 51152713
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  51152653 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 51152713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 55187142 - 55187193
Alignment:
Q  152 tacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  55187142 tacgtttttaaggagaagctatgccaaacacaatatcaataaagtaccttcg 55187193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 2414350 - 2414292
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  2414350 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtacctt 2414292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 49908890 - 49908977
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||| |       |||||| ||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  49908890 taggtaccgtttggcccgacttcttttcagcttctctatatttttaaggagaagctaagccaaacacaatatcaataaagtaccttcg 49908977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 14639466 - 14639523
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  14639466 cttttctacgtttttaagaagaagttaggccaaacacaatatcaataaagtaccttcg 14639523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 26108909 - 26108962
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  26108909 tctacgtttttaaggagaagctagaccaaacacaatatcaataaagtaccttcg 26108962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 48512018 - 48512071
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  48512018 tctacatttttaaggagaagctaagccaaacacaatatcaataaagtaccttcg 48512071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 7401260 - 7401200
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||||||| || |||||    
T  7401260 cagcttttctacgtttttaaggagaagttaggtcaaacacaatatcaataaagtatcttcg 7401200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 41145474 - 41145414
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  41145474 cagcttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 41145414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 51186768 - 51186828
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  51186768 cagcttctctacatttttaaggagaagctaggccaaacacaatatgaataaagtaccttcg 51186828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 32201885 - 32201827
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    ||||| ||||| |||||||||||||| || ||||||||||||||||||||| |||||||    
T  32201885 agcttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttc 32201827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 40848878 - 40848935
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||| || |||||    
T  40848878 cttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtatcttcg 40848935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 36191164 - 36191108
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||| ||||||||||||||| || |||| |||||||||||||||| ||||||||    
T  36191164 ttttctaagtttttaaggagaagttaggccagacacaatatcaataaagtaccttcg 36191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 13859434 - 13859489
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||||| ||||||    
T  13859434 cttttctgcatttttaaggagaagttaggccaaacacaatatcaataaagtacctt 13859489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 43116604 - 43116659
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||||| |||||||| ||||| || ||||||||||||||||||||| ||||||    
T  43116604 cttttctacatttttaagtagaagttaggccaaacacaatatcaataaagtacctt 43116659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 7404238 - 7404192
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||    
T  7404238 tttttaaggagaagttaggccaaacacaatatcaataaagtaccttc 7404192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 20680292 - 20680350
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| ||||| |||| ||||||||||||  |||||||||||||||||||| ||||||    
T  20680292 cagcttctctacattttcaaggagaagctagaccaaacacaatatcaataaagtacctt 20680350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 41104659 - 41104709
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    ||||| ||||||||||||||||||||||| | ||||||| |||||||||||    
T  41104659 agcttctctacgtttttaaggagaagctaggtcaaacactatatcaataaa 41104709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 347555 - 347502
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| |||||||||||||| || | ||||||||||||||||||| ||||||||    
T  347555 tctacatttttaaggagaagttaggtcaaacacaatatcaataaagtaccttcg 347502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 23627372 - 23627433
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaa-cacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || |||||| ||||||||||||||| ||||||||    
T  23627372 cagcttctctacatttttaaggagaagttaagccaaaacacaatatcaataaagtaccttcg 23627433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 18137422 - 18137482
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||  |||||||||||||| || | ||||||||||||||||||| ||||||||    
T  18137422 cagcttctctatatttttaaggagaaggtaggtcaaacacaatatcaataaagtaccttcg 18137482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 49124630 - 49124690
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||  |||||||||||||| || | ||||||||||||||||||| ||||||||    
T  49124630 cagcttctctatatttttaaggagaaggtaggtcaaacacaatatcaataaagtaccttcg 49124690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 18003386 - 18003332
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||| |||||||||||||| || || ||| |||||||||||||| ||||||    
T  18003386 ttttctacatttttaaggagaagttaggctaaatacaatatcaataaagtacctt 18003332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 577648 - 577603
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  577648 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 577603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 11180007 - 11180064
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaa-taccttcg 203  Q
    ||||||||  |||||| |||||| || |||||||||||||||||||||| ||||||||    
T  11180007 ttttctacaattttaaagagaagttaggccaaacacaatatcaataaaagtaccttcg 11180064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 17730732 - 17730773
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  17730732 tctacatttttaaggagaagttaggccaaacacaatatcaat 17730773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 29100607 - 29100554
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||||||||||||||||| | |||||| |||||||||||| || |||||    
T  29100607 tctacatttttaaggagaagctaggtcaaacaaaatatcaataaagtatcttcg 29100554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 33505966 - 33505925
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  33505966 tctacatttttaaggagaagttaggccaaacacaatatcaat 33505925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 35711047 - 35711002
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  35711047 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 35711002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 35715357 - 35715312
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  35715357 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 35715312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 35716084 - 35716043
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  35716084 tctacatttttaaggagaagttaggccaaacacaatatcaat 35716043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 37874550 - 37874505
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||||| || |||||||||||||||| |||| ||||||    
T  37874550 tttttaaggagaagttaggccaaacacaatatcagtaaagtacctt 37874505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 578388 - 578348
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  578388 ctacatttttaaggagaagttaggccaaacacaatatcaat 578348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 32136525 - 32136581
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacc 199  Q
    |||||| ||| | ||||||||||||||||  |||||||| |||||||||||| ||||    
T  32136525 cagcttctcttcatttttaaggagaagctgggccaaacataatatcaataaagtacc 32136581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 666706 - 666620
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  666706 aggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 666620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 29384918 - 29384832
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  29384918 aggtaccgtttggctcggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 29384832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 25819774 - 25819833
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  25819774 cagcttttctacgtttttaaggagaagctaagccaaacacaatatcaataaagtaccttc 25819833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 24029329 - 24029242
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       |||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  24029329 taggtaccgtttggcccggctttttttcagcttttttacgtttttaaggagaagttaagccaaacacaatatcaataaagtaccttcg 24029242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 24757985 - 24758072
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  24757985 taggtaccgtttggcccggctttttttcagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 24758072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 6930258 - 6930201
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  6930258 cttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 6930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 5590582 - 5590522
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  5590582 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 5590522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 26378173 - 26378233
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  26378173 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 26378233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 27178105 - 27178045
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  27178105 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 27178045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 31885761 - 31885705
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  31885761 ttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 31885705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 31940948 - 31940888
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  31940948 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 31940888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 42321259 - 42321319
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  42321259 cagcttttctacgtttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 42321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 32263408 - 32263357
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32263408 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaa 32263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 16051911 - 16051830
Alignment:
Q  120 taccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||||||||||||       ||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||    
T  16051911 taccgtttggcccggctttttttcagcttttctaagtttttaaggagaagttaagccaaacacaatatcaataaagtacctt 16051830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 16167244 - 16167184
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  16167244 cagcttctctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 16167184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 34442417 - 34442363
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  34442417 ttttctacgtttttaaggagaagctaggtcaaacacaatatcaataaagtacctt 34442363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 2476672 - 2476594
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    |||||||||||||| |||||       |||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  2476672 taggtaccgtttggtccggctttttttcagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaa 2476594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 4375956 - 4375899
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||    
T  4375956 cttttctacgtttttaaggagaagttaggccaaacataatatcaataaagtaccttcg 4375899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 16939492 - 16939548
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  16939492 ttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 16939548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 40306949 - 40307009
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| |||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  40306949 cagcttctctatgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 40307009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 42112717 - 42112657
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||| ||||||||||||||||| ||||||||    
T  42112717 cagcttttctacatttttaaggagaagttaggcctaacacaatatcaataaagtaccttcg 42112657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 43395596 - 43395652
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  43395596 ttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 43395652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 20338865 - 20338912
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  20338865 tttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 20338912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 39466597 - 39466648
Alignment:
Q  31 tgtacaccaaacatgtgatatgataaaataatgctattatcttttatatcat 82  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  39466597 tgtacaccaaacatgtgatttgataaaacaatgctatcatcttttatatcat 39466648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 42415790 - 42415843
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  42415790 tctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 42415843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 19358415 - 19358474
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||| ||||||| || |||||||||||||| |||||||||||||||    
T  19358415 cagcttttctacattttta-ggagaagttaggccaaacacaatattaataaaataccttcg 19358474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 37146151 - 37146207
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||| || |||||||||||||| |||||| ||||||||    
T  37146151 ttttctacatttttaaggagaagttaggccaaacacaatattaataaagtaccttcg 37146207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 10041892 - 10041943
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    |||||| ||||| |||||||||||||| || |||||||||||||||||||||    
T  10041892 cagcttatctacatttttaaggagaagttaggccaaacacaatatcaataaa 10041943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 3244578 - 3244635
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacct 200  Q
    |||||| ||||| ||||||||||||| |||  |||||||||||||||||||| |||||    
T  3244578 cagcttctctacatttttaaggagaaactagaccaaacacaatatcaataaagtacct 3244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 30511289 - 30511236
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||||||| ||||||||| || |||||||||||||||||| ||||||||    
T  30511289 tctacatttttaaagagaagctaggcgaaacacaatatcaataaagtaccttcg 30511236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 30551629 - 30551576
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||||||| ||||||||| || |||||||||||||||||| ||||||||    
T  30551629 tctacatttttaaagagaagctaggcgaaacacaatatcaataaagtaccttcg 30551576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 3025686 - 3025738
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatac 198  Q
    ||||||||| |||||||||||||| || | |||||||||||||||| ||||||    
T  3025686 cttttctacatttttaaggagaagttaggtcaaacacaatatcaattaaatac 3025738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 7535742 - 7535802
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| || ||||  |||||||||||| ||||||||    
T  7535742 cagcttctctacatttttaaggagaagctaggctaaacctaatatcaataaagtaccttcg 7535802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 19227519 - 19227575
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||  ||||||| |||||||| ||||||||||||||||||||| ||| ||||    
T  19227519 ttttctacaattttaagaagaagctaggccaaacacaatatcaataaagtacattcg 19227575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 39804087 - 39804027
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||| |  ||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  39804087 cagcttttctgcaattttaaggagaagctataccaaatacaatatcaataaagtaccttcg 39804027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 15976742 - 15976695
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||| ||||    
T  15976742 tttttaaggaggagctaggccaaacacaatatcaataaagtactttcg 15976695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 36241420 - 36241479
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||||| ||||| |||||||| || | ||||||||||||||||||| ||||||||    
T  36241420 agcttctctacatttttgaggagaagttaggtcaaacacaatatcaataaagtaccttcg 36241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 2529174 - 2529220
Alignment:
Q  157 ttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  2529174 ttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 2529220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 9813759 - 9813718
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||||||||||||||||||| || ||||||| ||||||||||    
T  9813759 tctacgtttttaaggagaagttaggccaaacgcaatatcaat 9813718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 12591521 - 12591476
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  12591521 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 12591476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 12705884 - 12705843
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||||||||||||||||||| || ||||||| ||||||||||    
T  12705884 tctacgtttttaaggagaagttaggccaaacgcaatatcaat 12705843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 18043032 - 18042991
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  18043032 tctacatttttaaggagaagttatgccaaacacaatatcaat 18042991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 791090 - 791046
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    ||||| ||||||||||||||||| ||||||||| |||| ||||||    
T  791090 tctacatttttaaggagaagctaggccaaacactatattaataaa 791046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 12592253 - 12592213
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  12592253 ctacatttttaaggagaagttaggccaaacacaatatcaat 12592213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 29383587 - 29383527
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||  |||||||||| ||| || | ||||||||||||||||||||||| ||||    
T  29383587 cagcttctctatatttttaaggaaaagttaggtcaaacacaatatcaataaaatacattcg 29383527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 33822 - 33907
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  33822 aggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttc 33907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 8876741 - 8876826
Alignment:
Q  118 ggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  8876741 ggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 8876826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 3325736 - 3325649
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  3325736 taggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 3325649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 36579550 - 36579637
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||| |       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  36579550 taggtaccgtttggcccgactttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 36579637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 13552884 - 13552827
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13552884 cttttctacatttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 13552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 18171143 - 18171083
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18171143 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 18171083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 31970902 - 31970962
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  31970902 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 31970962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 21843706 - 21843648
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  21843706 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtacctt 21843648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 969098 - 969184
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| |||||||||||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  969098 aggtatcgtttggcccggctttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 969184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 36581937 - 36581851
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  36581937 aggtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 36581851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 7273757 - 7273817
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  7273757 cagcttttctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 7273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 17052135 - 17052075
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  17052135 cagcttttctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 17052075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 24927201 - 24927141
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  24927201 cagcttttctaagtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 24927141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 5165204 - 5165290
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       ||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  5165204 aggtaccgtttggcccgactttttttcagcttttctaagtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 5165290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 36080016 - 36079930
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| |       |||||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  36080016 aggtaccgtttggcccgacttttttccagcttctctatgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 36079930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 669324 - 669264
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  669324 cagcttttctacatttttaaggagaaggtaggccaaacacaatatcaataaagtaccttcg 669264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 6034744 - 6034804
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||    
T  6034744 cagcttttctacgtttttaaggagaagttaggccaaaaacaatatcaataaagtaccttcg 6034804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 22077300 - 22077360
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22077300 cagcttctctacatttttaaggagaagctaggtcaaacacaatatcaataaaataccttcg 22077360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 35422875 - 35422935
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  35422875 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 35422935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 38708814 - 38708872
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  38708814 cagcttttctacatttttaaggagaagctaggccgaacacaatatcaataaagtacctt 38708872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 1834663 - 1834719
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  1834663 ttttctacgtttttaagaagaagttaggccaaacacaatatcaataaagtaccttcg 1834719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 7228657 - 7228713
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| || |||||    
T  7228657 ttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtatcttcg 7228713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 34911739 - 34911795
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||  |||||||||||||| || ||||||||||||||||||||||||||||||    
T  34911739 ttttctatatttttaaggagaagttaggccaaacacaatatcaataaaataccttcg 34911795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 36087081 - 36087021
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||||||||| ||||||||    
T  36087081 cagcttttctacgtttttaaggagaagttagttcaaacacaatatcaataaagtaccttcg 36087021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 38961323 - 38961267
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  38961323 ttttctatgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 38961267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 45473549 - 45473609
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  45473549 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 45473609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 3244494 - 3244436
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  3244494 cagcttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtacctt 3244436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 2179119 - 2179202
Alignment:
Q  120 taccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||       ||| || ||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  2179119 taccgtttggcccggctttttttcagtttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 2179202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 4630277 - 4630338
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgcca-aacacaatatcaataaaataccttcg 203  Q
    |||||||| ||| |||||||||||||| || |||  ||||||||||||||||||||||||||    
T  4630277 cagcttttttacatttttaaggagaagttaggcccgaacacaatatcaataaaataccttcg 4630338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 9922507 - 9922450
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| || ||||||||||| || | ||||||||||||||||||| ||||||||    
T  9922507 cttttctacattgttaaggagaagttaggtcaaacacaatatcaataaagtaccttcg 9922450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 32291497 - 32291557
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || | ||||||||||||||| ||| ||||||||    
T  32291497 cagcttctctacatttttaaggagaagttaggtcaaacacaatatcaagaaagtaccttcg 32291557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 38878220 - 38878280
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||| ||||| || | |||||| |||||||||||| ||||||||    
T  38878220 cagcttttctacatttttaagtagaagttaggtcaaacagaatatcaataaagtaccttcg 38878280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 41451683 - 41451739
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| ||||||| || ||| || ||||||||||||||||||||| ||||||||    
T  41451683 ttttctacatttttaaagaaaagttaggccaaacacaatatcaataaactaccttcg 41451739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 6452967 - 6453018
Alignment:
Q  31 tgtacaccaaacatgtgatatgataaaataatgctattatcttttatatcat 82  Q
    |||||||||||||| |||||||||||||| |||  || ||||||||||||||    
T  6452967 tgtacaccaaacatatgatatgataaaatcatgtcatcatcttttatatcat 6453018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 20642924 - 20642870
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||| |||||||||||||| || || ||| |||||||||||||| ||||||    
T  20642924 ttttctacatttttaaggagaagttaggctaaatacaatatcaataaagtacctt 20642870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 9545606 - 9545565
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  9545606 tctacatttttaaggagaagttaggccaaacacaatatcaat 9545565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 9919977 - 9919932
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  9919977 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 9919932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 10049975 - 10049934
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  10049975 tctacatttttaaggagaagttaggccaaacacaatatcaat 10049934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 10823573 - 10823532
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  10823573 tctacatttttaaggagaagttaggccaaacacaatatcaat 10823532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 9920693 - 9920653
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  9920693 ctacatttttaaggagaagttaggccaaacacaatatcaat 9920653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 10119696 - 10119755
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| |||||||||||||| || | ||||||||||||| ||||| ||||||||    
T  10119696 cagcttctctacatttttaaggagaagttaggtcaaacacaatatc-ataaagtaccttcg 10119755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 29463224 - 29463260
Alignment:
Q  38 caaacatgtgatatgataaaataatgctattatcttt 74  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  29463224 caaacatatgatatgataaaataatgctatcatcttt 29463260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 16242343 - 16242259
Alignment:
Q  119 gtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  16242343 gtaccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 16242259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 7217992 - 7218079
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  7217992 taggtaccgtttggcccggctatttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 7218079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 36218037 - 36217954
Alignment:
Q  120 taccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  36218037 taccgtttggcccggctttttttcagcttttctacgtttttaaggagaagctaagccaaacacaatatcaataaagtaccttcg 36217954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 27466376 - 27466436
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  27466376 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 27466436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 34804397 - 34804484
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||| ||||||       |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  34804397 taggtaccgtttgacccggcattttttcagcttttctacgtttttaaggagaagctaggccaaacataatatcaataaagtaccttcg 34804484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 45499652 - 45499734
Alignment:
Q  121 accgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  45499652 accgtttggcccggctttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 45499734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 29570580 - 29570640
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  29570580 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 29570640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 43819415 - 43819359
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  43819415 ttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 43819359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 44604483 - 44604423
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  44604483 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 44604423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 14717906 - 14717962
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  14717906 ttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 14717962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 17314695 - 17314639
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  17314695 ttttctacgtttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 17314639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 36060251 - 36060191
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  36060251 cagcttctctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 36060191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 41359958 - 41360018
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  41359958 cagcttttctaagtttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 41360018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 39684355 - 39684439
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| ||||||       ||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  39684355 aggtaccgtttgacccggctttttttcagcttttctaagtttttaaggagaaactaggccaaacacaatatcaataaagtacctt 39684439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 17047151 - 17047064
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||| ||||||||||||       || |||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  17047151 taggtactgtttggcccggctttttttcaacttttctaagtttttaaggagaagataggccaaacacaatatcaataaagtaccttcg 17047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 44907565 - 44907623
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  44907565 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtacctt 44907623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 39994961 - 39995018
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| ||||||||| || ||||||||||||||||||||| ||||||||    
T  39994961 cttttctacgttttgaaggagaagttaggccaaacacaatatcaataaagtaccttcg 39995018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 40049690 - 40049633
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  40049690 cttttctacatttttaaggagaaggtaggccaaacacaatatcaataaagtaccttcg 40049633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 6656539 - 6656599
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||| ||||||||||||| ||  |||||||||||||||||||| ||||||||    
T  6656539 cagcttttctacgattttaaggagaagatagaccaaacacaatatcaataaagtaccttcg 6656599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 6736941 - 6737001
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||| ||||||||||||| ||  |||||||||||||||||||| ||||||||    
T  6736941 cagcttttctacgattttaaggagaagatagaccaaacacaatatcaataaagtaccttcg 6737001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 12261864 - 12261924
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||  |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  12261864 cagcttttctatatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 12261924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 16843974 - 16844034
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || |||||||||||||||| |||| ||||||||    
T  16843974 cagcttttctacatttttaaggagaagttaggccaaacacaatatcactaaagtaccttcg 16844034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 41525408 - 41525468
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| ||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  41525408 cagcttttttacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 41525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 35003256 - 35003307
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  35003256 cagcttttctacatttttaaggagaagctaggtcaaacacaatatcaataaa 35003307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 38139743 - 38139685
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| |||||||||||||| ||  |||||||||||||||||||| ||||||    
T  38139743 cagcttttctacatttttaaggagaagttagaccaaacacaatatcaataaagtacctt 38139685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 6746246 - 6746306
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||  ||||||||||||| || ||||||||||||||||||||| ||||||||    
T  6746246 cagcttttttacaattttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 6746306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 34996622 - 34996678
Alignment:
Q  145 gcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  34996622 gcttctctacatttttaaggagaagttaagccaaacacaatatcaataaagtacctt 34996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 38138493 - 38138552
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||  ||||||||| |||||| |||||| |||||||||||||| ||||||||    
T  38138493 agcttttctacaattttaaggataagctaggccaaatacaatatcaataaagtaccttcg 38138552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 14451480 - 14451422
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| |||||||||||||| || | |||||| |||||||||||| ||||||    
T  14451480 cagcttttctacatttttaaggagaagttaggtcaaacataatatcaataaagtacctt 14451422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 42843472 - 42843529
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||| |||||||||||||| ||   ||||||||||||||||||| ||||||||    
T  42843472 cttttctacatttttaaggagaagttaaatcaaacacaatatcaataaagtaccttcg 42843529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 12262297 - 12262242
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||| |||  ||||||||||||||||||||| ||||||||    
T  12262297 ttttctacatttttaaggaga-gctgggccaaacacaatatcaataaattaccttcg 12262242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 39486996 - 39486953
Alignment:
Q  158 tttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||| |  ||||||||||||||||||||||||||||    
T  39486996 tttaaggagaagttgggccaaacacaatatcaataaaatacctt 39486953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 11923353 - 11923440
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| |||||       ||| || |||| ||||||||||||||| || | ||||||||||||||||||| ||| ||||    
T  11923353 taggtaccgtttggtccggctttttcccagtttctctatgtttttaaggagaagttaggtcaaacacaatatcaataaagtactttcg 11923440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 2964975 - 2964934
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||||||||||||||||||| || ||||||| ||||||||||    
T  2964975 tctacgtttttaaggagaagttaagccaaacgcaatatcaat 2964934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 3749864 - 3749905
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  3749864 tctacatttttaaggagaagttaggccaaacacaatatcaat 3749905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 42983087 - 42983147
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||  |||||||||||||| || | |||||| |||||||||||| ||||||||    
T  42983087 cagcttctctaaatttttaaggagaagttaggtcaaacagaatatcaataaagtaccttcg 42983147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 45298066 - 45298018
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||||| ||||| |||||||||||||| || | ||||||||||||||||    
T  45298066 cagcttctctacatttttaaggagaagttaagtcaaacacaatatcaat 45298018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 3849158 - 3849245
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  3849158 taggtaccgtttggcccggctttttttcagcttttctaagtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 3849245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 557566 - 557626
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  557566 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 557626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 32244090 - 32244150
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  32244090 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 32244150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 18595592 - 18595532
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  18595592 cagcttttctacgtttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 18595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 19988016 - 19988076
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  19988016 cagcttttctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 19988076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 20790195 - 20790251
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  20790195 ttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 20790251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 26183524 - 26183584
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  26183524 cagcttttctacgtttttaagaagaagctaggccaaacacaatatcaataaagtaccttcg 26183584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 29975427 - 29975487
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  29975427 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 29975487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 29042330 - 29042387
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacct 200  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||    
T  29042330 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtacct 29042387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 1949458 - 1949518
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| || |||||    
T  1949458 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtatcttcg 1949518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 17504576 - 17504632
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  17504576 ttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 17504632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 6019440 - 6019394
Alignment:
Q  157 ttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  6019440 ttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 6019394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 33946820 - 33946762
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||| ||||||||||||||||||| || | ||||||||||||||||||| ||||||    
T  33946820 cagctttcctacgtttttaaggagaagttaggtcaaacacaatatcaataaagtacctt 33946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 34248721 - 34248675
Alignment:
Q  157 ttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  34248721 ttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 34248675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 29858561 - 29858618
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||| || |||||    
T  29858561 cttttctacgtttttaaggagaagctaggccaaacgcaatatccataaagtatcttcg 29858618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 10944831 - 10944878
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  10944831 tttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 10944878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 34208001 - 34207945
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||| || | ||||||||||||||||||| ||| ||||    
T  34208001 ttttctacatttttaaggagaagttaggtcaaacacaatatcaataaagtactttcg 34207945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 6832537 - 6832590
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| |||||||||||||| || |||||||||||| |||||||| ||| ||||    
T  6832537 tctacatttttaaggagaagttaggccaaacacaatctcaataaagtacattcg 6832590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 24160538 - 24160591
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| |||||||||| ||||||  |||||| ||||||||||||| ||||||||    
T  24160538 tctacatttttaaggaaaagctagaccaaacgcaatatcaataaagtaccttcg 24160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 28193196 - 28193237
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  28193196 tctacatttttaaggagaagttaggccaaacacaatatcaat 28193237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 34317236 - 34317277
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  34317236 tctacatttttaaggagaagttaggccaaacacaatatcaat 34317277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 35133475 - 35133516
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  35133475 tctacatttttaaggagaagttaggccaaacacaatatcaat 35133516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 9981045 - 9980997
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaatac 198  Q
    ||||| |||||||||||||| ||  ||||||||||||||||| ||||||    
T  9981045 tctacatttttaaggagaagttagaccaaacacaatatcaattaaatac 9980997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 123726 - 123786
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  123726 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 123786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11582120 - 11582179
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11582120 agcttttctaagtttttaaggagaagctaggccaaacacaatatcaataaaataccttcg 11582179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 17247990 - 17248078
Alignment:
Q  115 ataggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||        ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  17247990 ataggtaccgtttggcccggctttcttttagcttttctacatttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 17248078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 33641218 - 33641305
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| |||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  33641218 taggtaccgtttggtccggctttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 33641305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 40433675 - 40433588
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| |||||       ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  40433675 taggtaccgtttggtccggctttttttcagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 40433588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 43122244 - 43122157
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       ||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  43122244 taggtaccgtttggcccggctttttttcagtttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 43122157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 25661273 - 25661187
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       ||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  25661273 aggtaccgtttggcccggctttttttcaatttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 25661187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 33825609 - 33825552
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  33825609 cttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 33825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 33878681 - 33878624
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  33878681 cttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtaccttcg 33878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 3263787 - 3263847
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  3263787 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtatcttcg 3263847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 7830578 - 7830638
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  7830578 cagcttttctacgtttttaaggagaagctaagccaaacacaatatcgataaagtaccttcg 7830638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 17584535 - 17584595
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  17584535 cagcttttctacgtttttaaggagaaggtaggccaaacacaatatcaataaagtaccttcg 17584595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 33375267 - 33375207
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  33375267 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 33375207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 33896648 - 33896588
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  33896648 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagcaccttcg 33896588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 41902801 - 41902741
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  41902801 cagcttttctacgtttttaagaagaagctaggccaaacacaatatcaataaagtaccttcg 41902741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 51834995 - 51835055
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  51834995 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 51835055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 33931994 - 33932081
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       |||||||||||| |||||||||||||| || | ||||||||||||||||||| ||||||||    
T  33931994 taggtaccgtttggcccggctatttttcagcttttctacatttttaaggagaagttaggtcaaacacaatatcaataaagtaccttcg 33932081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 24474531 - 24474471
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  24474531 cagcttttctacatttttaaggagaagataggccaaacacaatatcaataaagtaccttcg 24474471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 34077402 - 34077462
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  34077402 cagcttttctacatttttaagaagaagctaggccaaacacaatatcaataaagtaccttcg 34077462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 36166623 - 36166563
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||||||| ||||||||    
T  36166623 cagcttttctacgtttttaaggagaagttagggcaaacacaatatcaataaagtaccttcg 36166563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 37825027 - 37824967
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  37825027 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 37824967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 39328162 - 39328102
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  39328162 cagcttttctatgtttttaaggagaaactaggccaaacacaatatcaataaagtaccttcg 39328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 39730204 - 39730119
Alignment:
Q  118 ggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||       ||||||||| || ||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  39730204 ggtaccgtttggcccggctttttttcagcttttcaacatttttaatgagaagctaggccaaacacaatatcaataaagtaccttcg 39730119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 17367403 - 17367317
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||||       |||||||||||| |||||||| ||||| || | ||||||||||||||||||| ||||||||    
T  17367403 aggtaccgtttggcccggctttttttcagcttttctacatttttaagaagaagttagggcaaacacaatatcaataaagtaccttcg 17367317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 49570306 - 49570366
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| ||||||||||||||||  | ||||||||||||||||||| ||||||||    
T  49570306 cagcttttctacatttttaaggagaagctgggtcaaacacaatatcaataaagtaccttcg 49570366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 9573820 - 9573879
Alignment:
Q  144 agcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9573820 agcttttctaagtttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 9573879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 11755314 - 11755259
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||| |||||||    
T  11755314 ttttctacgtttttaaggagaagttaggccaaacataatatcaataaagtaccttc 11755259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 44825272 - 44825213
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    |||||| ||||| |||||||||||||| || | |||||||||||||||||||||||||||    
T  44825272 cagcttctctacatttttaaggagaagttaggtcaaacacaatatcaataaaataccttc 44825213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45102819 - 45102878
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    |||||||||||||||||||| |||||| || |||||||| |||||||||||| |||||||    
T  45102819 cagcttttctacgtttttaaagagaagttaggccaaacataatatcaataaagtaccttc 45102878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 51039080 - 51039029
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    |||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  51039080 cagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaa 51039029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 8947026 - 8946939
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||       ||| || ||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  8947026 taggtaccgtttagcccggctttttctcagattctctacatttttaaggagaagctaggtcaaacacaatatcaataaagtaccttcg 8946939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 43120131 - 43120078
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||| ||||||||||||||||| || |||||||||||||||||| ||||||||    
T  43120131 tctacatttttaaggagaagctaagcaaaacacaatatcaataaagtaccttcg 43120078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 1323501 - 1323441
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||| ||||  |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  1323501 cagcttctctatatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 1323441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 31222538 - 31222478
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||| |||||||||||||| || |||||||||||||| || ||| ||||||||    
T  31222538 cagcttttctacatttttaaggagaagttaggccaaacacaatattaaaaaagtaccttcg 31222478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 38799232 - 38799288
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||  || |||||||||||||||| |||| ||||||||    
T  38799232 ttttctacgtttttaaggagaaattaggccaaacacaatatcagtaaattaccttcg 38799288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 45588190 - 45588233
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataa 193  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  45588190 tctacatttttaaggagaagctaggccaaacacaatatcaataa 45588233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 16095969 - 16096027
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| |||| ||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  16095969 cagcttctctatgtttttaaggagaagttagaccaaacacaatatcaataaagtacctt 16096027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 43123336 - 43123394
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| ||||| ||||||||||||||||| || ||||| |||||||||||| ||||||    
T  43123336 cagcttctctacatttttaaggagaagctaggcaaaacaaaatatcaataaagtacctt 43123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 11603728 - 11603683
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  11603728 tttttaaggagaagctaggccaaacacaataccaataaagtacctt 11603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 21966999 - 21966942
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacct 200  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||| |||||| |||||    
T  21966999 cagcttctctacatttttaaggagaagctgggccaaacacaatattaataaagtacct 21966942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 23615958 - 23615905
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaat 196  Q
    |||||| ||||| |||||||| |||| ||| |||||||||||||||||||||||    
T  23615958 cagcttctctacatttttaagaagaatctaggccaaacacaatatcaataaaat 23615905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 34223010 - 34222969
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  34223010 tctacatttttaaggagaagctaggccaaacacaatatcaat 34222969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 23647289 - 23647238
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaa 194  Q
    |||||| ||||| |||||||| |||| ||| |||||||||||||||||||||    
T  23647289 cagcttctctacatttttaagaagaatctaggccaaacacaatatcaataaa 23647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 36953623 - 36953576
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  36953623 tttttaagaagaagataggccaaacacaatatcaataaagtaccttcg 36953576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 39880095 - 39880048
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  39880095 tttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 39880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 34651393 - 34651439
Alignment:
Q  157 ttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||| || |||||||||||||| |||||| ||||||||    
T  34651393 ttttaaggagaagttaggccaaacacaatattaataaagtaccttcg 34651439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 10697936 - 10697895
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  10697936 tctacatttttaaggagaagttaggccaaacacaatatcaat 10697895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 16034419 - 16034378
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| ||||||||| |||||||||||    
T  16034419 tctacatttttaaggagaagttacgccaaatacaatatcaat 16034378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 19401032 - 19401073
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  19401032 tctacatttttaaggagaagttaggccaaacacaatatcaat 19401073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 29843931 - 29843886
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  29843931 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 29843886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 42679411 - 42679456
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || |||||| |||||||||||    
T  42679411 cttttctacatttttaaggagaagttaggccaaatacaatatcaat 42679456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 52306368 - 52306409
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  52306368 tctacatttttaaggagaagttaggccaaacacaatatcaat 52306409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 10766491 - 10766531
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  10766491 ctacatttttaaggagaagttaggccaaacacaatatcaat 10766531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 29844665 - 29844625
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  29844665 ctacatttttaaggagaagttaggccaaacacaatatcaat 29844625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 42678677 - 42678717
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  42678677 ctacatttttaaggagaagttaggccaaacacaatatcaat 42678717  T

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Target: scaffold0684 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 1935 - 1993
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  1935 cagcttttctacgtttttaaggagaagctaggccaaacacaatatcaataaagtacctt 1993  T

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Target: scaffold0166 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 464 - 551
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||       |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  464 taggtaccgtttggcccggctttttttcagcttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 551  T

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Target: scaffold0710 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0710
Description:

Target: scaffold0710; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 154 - 94
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  154 cagcttttctacgtttttaaggagaagttaggccaaacacaatatcaataaagtaccttcg 94  T

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Target: scaffold0481 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 4287 - 4347
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||    
T  4287 cagcttttctacgtttttaaggagaagttagtccaaacacaatatcaataaagtaccttcg 4347  T

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Target: scaffold0178 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 8407 - 8347
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||    
T  8407 cagcttttctacgtttttaaggagaagttaggccaaacagaatatcaataaagtaccttcg 8347  T

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Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 5526 - 5613
Alignment:
Q  116 taggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||| ||||||||||||       || |||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  5526 taggtactgtttggcccggctttttttcaacttttctaagtttttaaggagaagataggccaaacacaatatcaataaagtaccttcg 5613  T

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Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 91827 - 91769
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  91827 cagcttctctacgtttttaaggagaagttaggccaaacacaatatcaataaattacctt 91769  T

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Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 111481 - 111425
Alignment:
Q  147 ttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  111481 ttttctacatttttaaggagaagttaggccaaacacaatatcaataaagtacattcg 111425  T

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Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 177826 - 177769
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||    
T  177826 cttttctacgtttttaagaagaagttaggccaaacacaatatcaataaagtaccttcg 177769  T

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Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 18080 - 18022
Alignment:
Q  143 cagcttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaatacctt 201  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  18080 cagcttctctacatttttaaggagaagttaggccaaacacaatatcaataaagtacctt 18022  T

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Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 4764 - 4821
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttcg 203  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||| || |||||    
T  4764 cttttctacgtttttaaggagaagctaggccaaacgcaatatccataaagtatcttcg 4821  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 227717 - 227791
Alignment:
Q  117 aggtaccgtttggcccggcnnnnnnncagcttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||||||||||| ||||||       |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  227717 aggtaccgtttgacccggctttttttcagcttctctacgtttttaaggagaagttaggccaaacacaatatcaat 227791  T

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Target: scaffold1793 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 1283 - 1237
Alignment:
Q  156 tttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    |||||||||||||| ||  |||||||||||||||||||| |||||||    
T  1283 tttttaaggagaagttagaccaaacacaatatcaataaagtaccttc 1237  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 18664 - 18619
Alignment:
Q  146 cttttctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    ||||||||| |||||||||||||| || ||| ||||||||||||||    
T  18664 cttttctacatttttaaggagaagttaggcctaacacaatatcaat 18619  T

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Target: scaffold0385 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 8083 - 8043
Alignment:
Q  151 ctacgtttttaaggagaagctacgccaaacacaatatcaat 191  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  8083 ctacatttttaaggagaagttaggccaaacacaatatcaat 8043  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 157758 - 157710
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaatac 198  Q
    ||||| |||||||||||||| ||  ||||||||||||||||| ||||||    
T  157758 tctacatttttaaggagaagttagaccaaacacaatatcaattaaatac 157710  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 140676 - 140728
Alignment:
Q  150 tctacgtttttaaggagaagctacgccaaacacaatatcaataaaataccttc 202  Q
    ||||| |||| ||||||||| || | ||||||||||||||||||| |||||||    
T  140676 tctacattttcaaggagaagttaggtcaaacacaatatcaataaagtaccttc 140728  T

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