View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5814_high_38 (Length: 382)

Name: NF5814_high_38
Description: NF5814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5814_high_38
NF5814_high_38
[»] chr8 (23 HSPs)
chr8 (207-362)||(32711124-32711279)
chr8 (204-362)||(10391687-10391845)
chr8 (204-362)||(42936786-42936944)
chr8 (212-362)||(33850889-33851039)
chr8 (212-362)||(26373872-26374021)
chr8 (212-362)||(5576135-5576285)
chr8 (213-362)||(24501324-24501473)
chr8 (205-362)||(23114763-23114920)
chr8 (208-362)||(7506435-7506589)
chr8 (205-317)||(24214683-24214795)
chr8 (204-362)||(42937950-42938099)
chr8 (215-362)||(41479712-41479850)
chr8 (213-362)||(43960016-43960156)
chr8 (206-362)||(42734810-42734947)
chr8 (212-319)||(39189451-39189558)
chr8 (234-319)||(33971920-33972005)
chr8 (215-319)||(29930308-29930412)
chr8 (206-296)||(37915528-37915618)
chr8 (210-257)||(13477814-13477861)
chr8 (205-258)||(4403595-4403648)
chr8 (269-322)||(4949615-4949668)
chr8 (323-363)||(29930428-29930468)
chr8 (346-378)||(42936938-42936970)
[»] chr7 (39 HSPs)
chr7 (212-378)||(12893887-12894053)
chr7 (205-378)||(47914708-47914882)
chr7 (206-378)||(47879630-47879803)
chr7 (210-362)||(43392024-43392176)
chr7 (206-362)||(44342996-44343152)
chr7 (212-362)||(18916445-18916595)
chr7 (205-362)||(40996123-40996280)
chr7 (208-362)||(7717866-7718020)
chr7 (208-362)||(7718797-7718951)
chr7 (208-362)||(31401879-31402033)
chr7 (212-362)||(39218883-39219033)
chr7 (205-362)||(34695814-34695971)
chr7 (212-362)||(8078605-8078755)
chr7 (208-352)||(727942-728086)
chr7 (212-362)||(977317-977467)
chr7 (220-362)||(43580624-43580766)
chr7 (212-362)||(30441654-30441808)
chr7 (217-362)||(34009509-34009645)
chr7 (204-362)||(7113884-7114033)
chr7 (205-362)||(20274893-20275040)
chr7 (211-319)||(19811092-19811200)
chr7 (214-291)||(448236-448313)
chr7 (212-319)||(3796703-3796810)
chr7 (214-296)||(835047-835129)
chr7 (214-296)||(1200227-1200309)
chr7 (292-362)||(31639141-31639211)
chr7 (212-352)||(3635081-3635221)
chr7 (218-296)||(43679762-43679839)
chr7 (212-277)||(12964031-12964096)
chr7 (219-311)||(10617374-10617466)
chr7 (212-352)||(40098431-40098570)
chr7 (212-279)||(10068948-10069015)
chr7 (228-319)||(43186964-43187055)
chr7 (208-258)||(31639220-31639270)
chr7 (212-273)||(9180353-9180414)
chr7 (214-277)||(46121680-46121744)
chr7 (266-317)||(19252018-19252069)
chr7 (267-321)||(10676302-10676356)
chr7 (241-290)||(44622927-44622976)
[»] chr5 (17 HSPs)
chr5 (212-378)||(139729-139896)
chr5 (214-362)||(33655584-33655732)
chr5 (212-362)||(21147675-21147825)
chr5 (213-362)||(7016268-7016417)
chr5 (208-362)||(4771764-4771918)
chr5 (211-342)||(27458679-27458810)
chr5 (212-362)||(5272439-5272589)
chr5 (212-362)||(849828-849969)
chr5 (215-352)||(43319232-43319360)
chr5 (220-362)||(6461275-6461408)
chr5 (264-362)||(32157573-32157671)
chr5 (219-284)||(43319586-43319651)
chr5 (216-319)||(8408686-8408789)
chr5 (228-315)||(9839992-9840079)
chr5 (201-315)||(28592990-28593104)
chr5 (231-319)||(28346554-28346641)
chr5 (208-322)||(30581991-30582104)
[»] chr4 (52 HSPs)
chr4 (212-362)||(34228161-34228311)
chr4 (204-352)||(40536558-40536706)
chr4 (215-362)||(25331610-25331757)
chr4 (201-352)||(41880582-41880733)
chr4 (212-362)||(7007814-7007964)
chr4 (212-362)||(22202590-22202740)
chr4 (206-362)||(3437055-3437211)
chr4 (205-362)||(55975083-55975240)
chr4 (208-362)||(30009290-30009444)
chr4 (205-362)||(32952162-32952319)
chr4 (208-362)||(42787139-42787293)
chr4 (219-352)||(47599284-47599417)
chr4 (218-362)||(39479133-39479277)
chr4 (203-362)||(24130453-24130603)
chr4 (208-352)||(23465432-23465577)
chr4 (208-362)||(27453704-27453858)
chr4 (212-311)||(25446649-25446748)
chr4 (211-362)||(28542020-28542162)
chr4 (217-352)||(46635241-46635367)
chr4 (202-300)||(7246537-7246635)
chr4 (208-362)||(41321224-41321369)
chr4 (208-362)||(49469745-49469890)
chr4 (206-362)||(31314418-31314565)
chr4 (210-362)||(37046091-37046234)
chr4 (268-362)||(1113662-1113756)
chr4 (208-362)||(16020589-16020729)
chr4 (212-319)||(44770485-44770592)
chr4 (214-315)||(9163671-9163773)
chr4 (213-311)||(26340557-26340654)
chr4 (212-323)||(5104924-5105035)
chr4 (212-319)||(20021923-20022030)
chr4 (212-311)||(42721943-42722041)
chr4 (212-319)||(11090758-11090866)
chr4 (236-319)||(36478837-36478920)
chr4 (218-296)||(7249548-7249625)
chr4 (215-281)||(8712363-8712429)
chr4 (213-316)||(41581433-41581536)
chr4 (300-362)||(7246785-7246847)
chr4 (265-319)||(16019849-16019903)
chr4 (212-322)||(21309041-21309151)
chr4 (213-315)||(28371399-28371501)
chr4 (213-281)||(1045321-1045390)
chr4 (206-258)||(19740805-19740856)
chr4 (212-352)||(28099685-28099825)
chr4 (295-362)||(8712302-8712368)
chr4 (212-291)||(45341586-45341664)
chr4 (212-258)||(12913889-12913935)
chr4 (206-251)||(53276395-53276440)
chr4 (212-315)||(37369433-37369535)
chr4 (298-328)||(53276328-53276358)
chr4 (306-362)||(1045266-1045323)
chr4 (264-296)||(53276351-53276383)
[»] chr3 (45 HSPs)
chr3 (217-378)||(6131014-6131175)
chr3 (212-378)||(3999149-3999316)
chr3 (211-362)||(19254431-19254582)
chr3 (209-352)||(54626042-54626185)
chr3 (205-362)||(995477-995634)
chr3 (212-352)||(44761619-44761759)
chr3 (212-362)||(33995991-33996141)
chr3 (213-362)||(33807165-33807314)
chr3 (217-362)||(51699054-51699199)
chr3 (208-362)||(6590037-6590191)
chr3 (217-362)||(20498753-20498898)
chr3 (212-362)||(29448437-29448586)
chr3 (208-351)||(10138721-10138864)
chr3 (1-209)||(53058410-53058613)
chr3 (205-362)||(35338227-35338384)
chr3 (211-362)||(25418912-25419054)
chr3 (209-362)||(40247285-40247429)
chr3 (204-362)||(16008091-16008240)
chr3 (201-352)||(53928639-53928780)
chr3 (212-319)||(6976187-6976294)
chr3 (212-362)||(52080503-52080648)
chr3 (219-362)||(1439521-1439655)
chr3 (205-323)||(7319063-7319180)
chr3 (214-319)||(46174719-46174824)
chr3 (293-362)||(3205599-3205668)
chr3 (212-319)||(50899253-50899360)
chr3 (212-319)||(15492405-15492512)
chr3 (298-356)||(37820392-37820450)
chr3 (230-362)||(52115058-52115181)
chr3 (212-319)||(539341-539445)
chr3 (212-323)||(45135682-45135793)
chr3 (204-258)||(12108123-12108177)
chr3 (206-296)||(6034685-6034775)
chr3 (208-278)||(37820319-37820389)
chr3 (269-313)||(27899756-27899800)
chr3 (210-254)||(39842117-39842161)
chr3 (217-319)||(12104045-12104148)
chr3 (253-319)||(23535665-23535731)
chr3 (284-371)||(44277571-44277660)
chr3 (223-319)||(5825996-5826091)
chr3 (223-282)||(28145618-28145678)
chr3 (222-258)||(38772550-38772586)
chr3 (217-257)||(44277677-44277717)
chr3 (212-248)||(46750027-46750063)
chr3 (323-371)||(55235517-55235565)
[»] chr2 (24 HSPs)
chr2 (206-362)||(21136584-21136740)
chr2 (212-378)||(32125776-32125943)
chr2 (212-362)||(22551375-22551525)
chr2 (212-362)||(24776821-24776971)
chr2 (205-362)||(9120638-9120795)
chr2 (212-362)||(44766401-44766551)
chr2 (217-362)||(31170101-31170246)
chr2 (208-362)||(305093-305246)
chr2 (212-352)||(16270305-16270447)
chr2 (209-362)||(43848124-43848277)
chr2 (206-362)||(35317634-35317790)
chr2 (217-362)||(14198189-14198334)
chr2 (212-362)||(12407901-12408042)
chr2 (212-362)||(12419961-12420102)
chr2 (217-338)||(1789960-1790081)
chr2 (212-311)||(11997195-11997293)
chr2 (206-281)||(20605528-20605603)
chr2 (228-315)||(26600885-26600972)
chr2 (212-352)||(20156345-20156485)
chr2 (212-352)||(34027518-34027658)
chr2 (229-321)||(13436091-13436183)
chr2 (212-311)||(1188677-1188776)
chr2 (252-315)||(21988247-21988310)
chr2 (213-313)||(27637428-27637524)
[»] chr1 (31 HSPs)
chr1 (203-362)||(19451273-19451432)
chr1 (208-362)||(956015-956169)
chr1 (212-362)||(6303776-6303926)
chr1 (212-362)||(47781201-47781352)
chr1 (212-362)||(730630-730780)
chr1 (212-362)||(35678762-35678910)
chr1 (212-362)||(28823883-28824033)
chr1 (212-362)||(49197762-49197912)
chr1 (206-362)||(35280212-35280369)
chr1 (205-362)||(45759452-45759609)
chr1 (208-362)||(50192068-50192222)
chr1 (217-362)||(47653843-47653989)
chr1 (206-362)||(31571839-31571995)
chr1 (207-362)||(48525037-48525183)
chr1 (206-362)||(49418523-49418670)
chr1 (272-362)||(21222707-21222797)
chr1 (204-320)||(31622260-31622376)
chr1 (260-362)||(45536545-45536647)
chr1 (297-378)||(33085441-33085522)
chr1 (212-352)||(1923097-1923237)
chr1 (212-311)||(29209444-29209542)
chr1 (211-285)||(32588243-32588316)
chr1 (218-291)||(37014327-37014400)
chr1 (212-284)||(47784804-47784876)
chr1 (208-376)||(33026061-33026219)
chr1 (217-315)||(42658579-42658677)
chr1 (208-273)||(29556579-29556644)
chr1 (277-317)||(9577161-9577201)
chr1 (213-319)||(26284304-26284410)
chr1 (265-319)||(27199065-27199119)
chr1 (348-378)||(28824029-28824059)
[»] chr6 (15 HSPs)
chr6 (201-362)||(6196930-6197091)
chr6 (207-362)||(2300145-2300300)
chr6 (238-362)||(29077203-29077327)
chr6 (238-362)||(29112175-29112299)
chr6 (208-362)||(1392133-1392278)
chr6 (205-292)||(3608041-3608128)
chr6 (214-316)||(7052367-7052469)
chr6 (212-323)||(23929297-23929408)
chr6 (208-362)||(2238925-2239060)
chr6 (212-269)||(10344927-10344984)
chr6 (212-352)||(30878743-30878883)
chr6 (205-257)||(5160943-5160995)
chr6 (211-248)||(29114867-29114904)
chr6 (287-338)||(25839837-25839888)
chr6 (229-315)||(8634703-8634789)
[»] scaffold0151 (2 HSPs)
scaffold0151 (206-362)||(24527-24683)
scaffold0151 (274-362)||(37112-37200)
[»] scaffold0400 (1 HSPs)
scaffold0400 (228-362)||(14597-14731)
[»] scaffold0365 (1 HSPs)
scaffold0365 (228-362)||(15240-15374)
[»] scaffold0113 (1 HSPs)
scaffold0113 (201-362)||(37655-37807)
[»] scaffold0287 (1 HSPs)
scaffold0287 (212-352)||(10864-11004)
[»] scaffold0276 (1 HSPs)
scaffold0276 (298-362)||(213-277)


Alignment Details
Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 207 - 362
Target Start/End: Original strand, 32711124 - 32711279
Alignment:
Q  207 taggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgat 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32711124 taggagggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgat 32711223  T
Q  307 tttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||    
T  32711224 tttaaaagactattaaggatttcaatagatttaattcatgagatttgaaaggattt 32711279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 204 - 362
Target Start/End: Original strand, 10391687 - 10391845
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat 303  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10391687 ttttaggggggtgtattggattagaattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgat 10391786  T
Q  304 gattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  10391787 gattttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 10391845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 204 - 362
Target Start/End: Original strand, 42936786 - 42936944
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat 303  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  42936786 ttttaggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgat 42936885  T
Q  304 gattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  42936886 gattttgaaagactattaaggatttcaatggatttaattcataagattttaaaagattt 42936944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 33851039 - 33850889
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33851039 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 33850940  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  33850939 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 33850889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 26373872 - 26374021
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  26373872 gggtgtactggattaggattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaa-actttgcaagattttgatgactttgatgattttaa 26373970  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26373971 aagactattaaggatttcaatggatttaattcataagatttgaaatgattt 26374021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 5576135 - 5576285
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  5576135 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttggggattttaaaagactttgcaagattttgacgactttgatgattttaa 5576234  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||| |||||    
T  5576235 aagactattaaagatttcaatggatttaattcataagattttaaaggattt 5576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 213 - 362
Target Start/End: Original strand, 24501324 - 24501473
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  24501324 ggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaa 24501423  T
Q  313 agactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||| |||||| |||||||||||| ||| |||||    
T  24501424 agactattaaggatttcaattgatttaattcataagattttaaaggattt 24501473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 23114763 - 23114920
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    ||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||| | ||||||| ||||| |||||||    
T  23114763 tttaggacggtgtattagattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagacttgggaggatttggatgattttgatg 23114862  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  23114863 attttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 23114920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 7506435 - 7506589
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||   ||||||||| | ||||||||||    
T  7506435 aggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgatagattttgattaatttgatgatt 7506534  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7506535 ttaaaagattattaaggatttcaatggatttaattcataagattttaaaggattt 7506589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 24214683 - 24214795
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    ||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24214683 tttaggagggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 24214782  T
Q  305 attttaaaagact 317  Q
    |||||||||||||    
T  24214783 attttaaaagact 24214795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 204 - 362
Target Start/End: Complemental strand, 42938099 - 42937950
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat 303  Q
    ||||||| ||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||         ||    
T  42938099 ttttaggggggtgtattggattaggattttaatggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttg---------at 42938009  T
Q  304 gattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  42938008 gattttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 42937950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 362
Target Start/End: Complemental strand, 41479850 - 41479712
Alignment:
Q  215 tgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||         |||||||||||||    
T  41479850 tgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtaagattttg---------atgattttaaaag 41479760  T
Q  315 actattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||| |||| |||||||||| |||||||||||| ||| |||||    
T  41479759 actattaagaattttaatggatttaattcataagattttaaaggattt 41479712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 213 - 362
Target Start/End: Complemental strand, 43960156 - 43960016
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    ||||||||||| || |||||||||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||||||         |||||||||||    
T  43960156 ggtgtattggactaggattttaaaggacaatttttgtttaaaaaaatcttgaagattttaaaagactttggaggattttg---------atgattttaaa 43960066  T
Q  313 agactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  43960065 agactattaaggatttcaatggatttaattcataagattttaaaggattt 43960016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 42734810 - 42734947
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||                   |||||||||||    
T  42734810 ttaggggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaa-------------------gactttgatga 42734890  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  42734891 ttttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 42734947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 39189451 - 39189558
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| |||||||||||| |||||| | ||||||||| ||  | |||||||||||| |||| |||||||| |||||||| ||||||||||    
T  39189451 gggtgtattagattaggattttaaaggacaattttagcttaaaaaagtctcaaagattttaaaagattttgtaggattttaatgactttcatgattttaa 39189550  T
Q  312 aagactat 319  Q
    ||||||||    
T  39189551 aagactat 39189558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 33971920 - 33972005
Alignment:
Q  234 aaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||    
T  33971920 aaaggacaatttttatttaaaaaagtcttaaggattttaaaagactctgcagaattttaatgactttgatggttttaaaagactat 33972005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 29930308 - 29930412
Alignment:
Q  215 tgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaag 314  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| | |  ||||||||||||| |||| |||||||| | ||||||  | ||||||||||    
T  29930308 tgtactggattaggattttaaaggataatttttgtttaaaaaagtcatttggattttaaaagattttgtaggattttaacgactttagtaattttaaaag 29930407  T
Q  315 actat 319  Q
    |||||    
T  29930408 actat 29930412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 37915618 - 37915528
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatga 296  Q
    |||||||||| |||||||||| ||||||||| || |||||||||||||||||  || |||||||||||||||||||| || |||| |||||    
T  37915618 ttaggagggtatattggattaggattttaaatgacaatttttgtttaaaaaattctagaggattttaaaagactttggagaatttggatga 37915528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 13477814 - 13477861
Alignment:
Q  210 gagggtgtattggattacgattttaaaggataatttttgtttaaaaaa 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13477814 gagggtgtattggattaggattttaaaggataatttttgtttaaaaaa 13477861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 4403648 - 4403595
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaag 258  Q
    ||||||||||||||||| |||| |||||||||||||||||| || |||||||||    
T  4403648 tttaggagggtgtattgaattatgattttaaaggataatttgtgcttaaaaaag 4403595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 4949615 - 4949668
Alignment:
Q  269 tttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaa 322  Q
    ||||||||| |||| |||||||| || | |||||||||||||||||||||||||    
T  4949615 tttaaaagattttggaggattttaataattttgatgattttaaaagactattaa 4949668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 29930428 - 29930468
Alignment:
Q  323 ggatttcaatggatttatttcataagatttgaaatgatttt 363  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  29930428 ggatttcaatggatttacatcataagattttaaatgatttt 29930468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 42936938 - 42936970
Alignment:
Q  346 aagatttgaaatgattttattgatttcaagaga 378  Q
    |||||||||||||||||||| ||||||||||||    
T  42936938 aagatttgaaatgattttatggatttcaagaga 42936970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 212 - 378
Target Start/End: Complemental strand, 12894053 - 12893887
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12894053 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 12893954  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattttattgatttcaagaga 378  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||| |||||||| ||||||||||||    
T  12893953 aagactattaagaatttcaatggatttaattcataagattttaaaagattttatggatttcaagaga 12893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 205 - 378
Target Start/End: Complemental strand, 47914882 - 47914708
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47914882 tttaggggggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatg 47914783  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt-tattgatttcaagaga 378  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||  | |||||||||||||    
T  47914782 attttaaaagactattaaggatttcaatggatttaattcataagattttaaaggatttgaaatgatttcaagaga 47914708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 206 - 378
Target Start/End: Complemental strand, 47879803 - 47879630
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47879803 ttaggggggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatga 47879704  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt-tattgatttcaagaga 378  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||  | |||||||||||||    
T  47879703 ttttaaaagactattaaggatttcaatggatttaattcataagattttaaaggatttgaaatgatttcaagaga 47879630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 210 - 362
Target Start/End: Original strand, 43392024 - 43392176
Alignment:
Q  210 gagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttt 309  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43392024 gagggtgtattggattaggattttaaaggataatttttgtttaaaaaagtattgaggattttaaaagactttgcagaattttgatgactttgatgatttt 43392123  T
Q  310 aaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  43392124 aaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 43392176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 44342996 - 44343152
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  44342996 ttaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttcatgactttgatga 44343095  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  44343096 ttttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 44343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 18916445 - 18916595
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18916445 gggtgtattggattatgattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaagactttgcaagattttgatgactttgatgattttaa 18916544  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  18916545 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 18916595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 40996123 - 40996280
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||| |||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  40996123 tttaggggggtgtattgtattaggattttaaaggataatttttgattaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatg 40996222  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||    
T  40996223 attttaaaagactattaaagatttcaatggatttaattcataagattttaaaggattt 40996280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 7717866 - 7718020
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||| |||||||| ||||| |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7717866 aggaaggtgtattagattaggattttaaagaacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatt 7717965  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7717966 ttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 7718020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 7718797 - 7718951
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||| |||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7718797 aggaaggtgtattggattaggattttaaagaacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatt 7718896  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||    
T  7718897 ttaaaagactattaatgatttcaatggatttaattcataagattttaaaggattt 7718951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 31402033 - 31401879
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||    
T  31402033 aggagggtgtattgaattagaattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgataaccttgatgatt 31401934  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||    
T  31401933 ttaaaagactattaaggatttcaatggatttaattcatatgattttaaaggattt 31401879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 39218883 - 39219033
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  39218883 gggtgtattgaattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgattactttgatgattttaa 39218982  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  39218983 aagactattaaggatttcaatggatttaattaataagattttaaaggattt 39219033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 205 - 362
Target Start/End: Complemental strand, 34695971 - 34695814
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||  |||||||||| | |||||||    
T  34695971 tttaggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgatggattttgattaatttgatg 34695872  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||| ||| |||||    
T  34695871 attttaaaatattattaaggatttcaatggatttaattcataagattttaaaggattt 34695814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 8078755 - 8078605
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| | || |||||||||||| |||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  8078755 gggtgtattgaaataggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttacaagattttgatgactttgatgattttaa 8078656  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||| |||||    
T  8078655 aagactattaaggatttcaatgaatttaattaataagattttaaaggattt 8078605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 208 - 352
Target Start/End: Complemental strand, 728086 - 727942
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  728086 aggagggtgtattgaattaggattttaaaggagaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaatattttgatgactttgatgatt 727987  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||||| ||||||||| |||||||| |||||| ||||||| ||||    
T  727986 ttaaaaaactattaagaatttcaatagatttaattcataatattt 727942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 977467 - 977317
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||| ||| ||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  977467 gggtgtattggtttaggattttaaaagacaatttttgtttaaaaaagtcttgaagattttaaaagactttgcaagattttgatgactttgatgattttaa 977368  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||| | |||| |||||||||||||||| |||||||||||| ||| |||||    
T  977367 aagatttttaatgatttcaatggatttaattcataagattttaaaggattt 977317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 43580624 - 43580766
Alignment:
Q  220 tggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    ||||||| |||||||||||| |||||||||||||||||   |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43580624 tggattaggattttaaaggacaatttttgtttaaaaaaattttgacgattttaaaagactttgcaagattttgataactttgatgattttaaaagactat 43580723  T
Q  320 taaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||| |||||||||||| ||| |||||    
T  43580724 taaggatttcaatggatttaattcataagattttaaaggattt 43580766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 30441808 - 30441654
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat----gatt 307  Q
    |||| |||||||||| |||||||||| | |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    ||||    
T  30441808 gggtttattggattaagattttaaagtacaatttttgtttaaaaaagtcttgaggattttaaaatactttgcaagattttgatgactttgatgattgatt 30441709  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||    
T  30441708 ttaaaagactattaaggatttcaagggatttaattcataagattttaaaggattt 30441654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 34009645 - 34009509
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||         |||||||||||||||    
T  34009645 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttg---------atgattttaaaagac 34009555  T
Q  317 tattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||    
T  34009554 tattaaggatttcaatggatttaattcataagattttaaaggattt 34009509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 204 - 362
Target Start/End: Complemental strand, 7114033 - 7113884
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat 303  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||| || |||||||||||||||| |||||||||         ||    
T  7114033 ttttaggagggtgtattggtttatgattttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactttggaggattttg---------at 7113943  T
Q  304 gattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| |||| ||| |||||    
T  7113942 gattttaaaagactattaaagatttcaatggatttaattcataatattttaaaggattt 7113884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 20274893 - 20275040
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    ||||||||||||||||| |||| |||||||||| | ||||||||||| |||||| ||||||||||||||||||||||| |||||         |||||||    
T  20274893 tttaggagggtgtattgaattaggattttaaagtacaatttttgttt-aaaaagtcttgaggattttaaaagactttggaggat---------tttgatg 20274982  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||    
T  20274983 attttaaaagactattaaggatttcaatggatttaattcaaaagattttaaaggattt 20275040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 319
Target Start/End: Complemental strand, 19811200 - 19811092
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||||||| || ||||||||||||||| |||| |||||||| |||||||| ||||||| |    
T  19811200 agggtgtattgaattaggattttgaaggataatttttgcttaaaaaagtctcgaggattttaaaagattttgtaggattttaatgacttttatgatttca 19811101  T
Q  311 aaagactat 319  Q
    |||||||||    
T  19811100 aaagactat 19811092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 448313 - 448236
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggatttt 291  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  448313 gtgtgttgaattatgattttaaagaataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggatttt 448236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 3796703 - 3796810
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| |||| |||||||||||| ||||||||  |||||||| ||  | |||||||||||| |||| |||||||  |||||||| ||||||||||    
T  3796703 gggtgtattgaattaggattttaaaggacaatttttgagtaaaaaagtctcaaagattttaaaagattttgtaggatttaaatgacttttatgattttaa 3796802  T
Q  312 aagactat 319  Q
    ||||||||    
T  3796803 aagactat 3796810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 296
Target Start/End: Complemental strand, 835129 - 835047
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatga 296  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||||| | | ||||| ||||||||||    
T  835129 gtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgatgattttaaaaaattatgcagaattttgatga 835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 296
Target Start/End: Complemental strand, 1200309 - 1200227
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatga 296  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||||| | | ||||| ||||||||||    
T  1200309 gtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgatgattttaaaaaattatgcagaattttgatga 1200227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 31639211 - 31639141
Alignment:
Q  292 gatgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||    
T  31639211 gatgactttaatgattttaaaagactattaaggatttcaatgaatttaattcataagattttaaaggattt 31639141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 352
Target Start/End: Complemental strand, 3635221 - 3635081
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| || ||||||| | | |||||| || | |||||| |||||| | |||| |||| | |||||||| | ||||||||    
T  3635221 gggtgtattggattaggattttaaaagacaatttttatatgaaaaagtctagtggatttaaaaagattatgcaagattgtaatgacttttaggattttaa 3635122  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  3635121 aagattctcaaggatttcaagggatttatatcttaagattt 3635081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 43679839 - 43679762
Alignment:
Q  218 attggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatga 296  Q
    ||||||||| |||||||| |||||||||||||||||||||  ||| || |||||||||||| |||||||||||||||||    
T  43679839 attggattaggattttaatggataatttttgtttaaaaaaatctttagtattttaaaagac-ttgcaggattttgatga 43679762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 12964096 - 12964031
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaaga 277  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||| ||||| ||||||||||||    
T  12964096 gggtgtattggattaggattttaaaggacaatttttgcttaaaaaagtcttgaagattttaaaaga 12964031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 10617466 - 10617374
Alignment:
Q  219 ttggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||  ||||||||||| |||||||  ||||||||  ||||| ||||||||||||||| | |||||||| |||||||| ||||||||||    
T  10617466 ttggattaaaattttaaaggacaatttttacttaaaaaaatcttgaagattttaaaagacttcgtaggattttaatgactttcatgattttaa 10617374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 352
Target Start/End: Complemental strand, 40098570 - 40098431
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| ||||||||| ||| |||||||| | |||||| |  | | ||||||||||| | |||| |||||| |||||||| | ||||||||    
T  40098570 gggtgtatttgattaggattttaaaagattatttttgtatgaaaaagtca-gtgaattttaaaagattatgcaagattttaatgacttttaggattttaa 40098472  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  40098471 aagattctcaaggatttcaagggatttatatcttaagattt 40098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 10069015 - 10068948
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagact 279  Q
    ||||||||| || || ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  10069015 gggtgtattagactaggattttaaaggataatttttgcttaaaaaagtctcaaggattttaaaagact 10068948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 43186964 - 43187055
Alignment:
Q  228 gattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    ||||||| |||| |||||||| ||||||||| ||  | |||||| ||||| |||  |||||||| |||||||| ||||||||||||||||||    
T  43186964 gattttagaggacaatttttgattaaaaaagtctcaaagatttttaaagattttagaggattttaatgactttcatgattttaaaagactat 43187055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 31639270 - 31639220
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaag 258  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  31639270 aggagggtgtattggattataattttaaaggacaatttttgtttaaaaaag 31639220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 9180414 - 9180353
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaa 273  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||  || ||||||||||    
T  9180414 gggtgaattggattaggattttaaaggacaatttttgtttaaaaaagtgttaaggattttaa 9180353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 46121680 - 46121744
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtt-taaaaaagccttgaggattttaaaaga 277  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||||  ||| |||||||||||||    
T  46121680 gtgtattggattaggattttaaaagataatttttgttgaaaaaaagtattgtggattttaaaaga 46121744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 19252069 - 19252018
Alignment:
Q  266 gattttaaaagactttgcaggattttgatgactttgatgattttaaaagact 317  Q
    |||||||||||| |||| | |||||| |||||||| ||||||||||||||||    
T  19252069 gattttaaaagattttgtaagattttaatgactttcatgattttaaaagact 19252018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 10676302 - 10676356
Alignment:
Q  267 attttaaaagactttgcaggattttgatgactttgatgattttaaaagactatta 321  Q
    ||||||||||| |||| | |||||| |||||||| ||||||||||||||| ||||    
T  10676302 attttaaaagattttgtaagattttaatgactttcatgattttaaaagacaatta 10676356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 44622927 - 44622976
Alignment:
Q  241 aatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattt 290  Q
    ||||| |||| ||||||| ||| ||||||||||||||||||||| |||||    
T  44622927 aatttctgttcaaaaaagtcttaaggattttaaaagactttgcatgattt 44622976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 212 - 378
Target Start/End: Complemental strand, 139896 - 139729
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagcctt-gaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  139896 gggtgtattggattatgattttaaaggataatttttgtttaaaaaagtctttgaagattttaaaagactttgcaggattttgatgactttgataatttta 139797  T
Q  311 aaagactattaaggatttcaatggatttatttcataagatttgaaatgattttattgatttcaagaga 378  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||    
T  139796 aaagactattaaggatttcaatagatttaattcataaaatttgaaatgattttatagatttcaagaga 139729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 33655584 - 33655732
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaa 313  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33655584 gtgtattagattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaa 33655683  T
Q  314 gactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  33655684 gactattaaggatttcaatggatttaattcataagattttaaaggattt 33655732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 21147825 - 21147675
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  21147825 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagattttccaagattttgatgactttgatgattttaa 21147726  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  21147725 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 21147675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 213 - 362
Target Start/End: Original strand, 7016268 - 7016417
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7016268 ggtgtatttgattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaa 7016367  T
Q  313 agactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7016368 agactattaaggatttcaatggatttaattcataagattttaaaggattt 7016417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 4771764 - 4771918
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||||||  ||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  4771764 aggagggtgtatttgattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagactttacagaattttaatgactttgatgatt 4771863  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  4771864 ttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 4771918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 27458679 - 27458810
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||||||    
T  27458679 agggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagacttttaaagattttgatgactttgatgatttta 27458778  T
Q  311 aaagactattaaggatttcaatggatttattt 342  Q
    ||||| ||||||||||||||||| ||||||||    
T  27458779 aaagattattaaggatttcaatgtatttattt 27458810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 5272439 - 5272589
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| ||||||||||||||      |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5272439 gggtgtattggattaggattttaaaggacaatttttgtttaaattttttttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 5272538  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||| |||||||||||||||| || ||||||||| ||| |||||    
T  5272539 aagactattaaagatttcaatggatttaattaataagattttaaaggattt 5272589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 849969 - 849828
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||         ||||||||||    
T  849969 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttataagactttgcaagattttg---------atgattttaa 849879  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  849878 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 849828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 215 - 352
Target Start/End: Original strand, 43319232 - 43319360
Alignment:
Q  215 tgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaag 314  Q
    |||||||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| |||         |||||||||||||||||    
T  43319232 tgtattggattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagat---------tttgatgattttaaaag 43319322  T
Q  315 actattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  43319323 actattaaggatttcaatggatttaattcataagattt 43319360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 362
Target Start/End: Complemental strand, 6461408 - 6461275
Alignment:
Q  220 tggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||         ||||||||||||||||||    
T  6461408 tggattaggattttaaaggataatttttgtttaaaaaagttttgagaattttaaaagattttgcaggattttg---------atgattttaaaagactat 6461318  T
Q  320 taaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||| |||||||||||||||| |||||||||||| ||| |||||    
T  6461317 taaagatttcaatggatttaattcataagattttaaaggattt 6461275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 362
Target Start/End: Original strand, 32157573 - 32157671
Alignment:
Q  264 aggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||   ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||    
T  32157573 aggattttaaaagactttgtgtgattttgatgattttgattattttaaaagactattaaggatttcaatggatttaattcatgagattttaaaagattt 32157671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 43319651 - 43319586
Alignment:
Q  219 ttggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgca 284  Q
    |||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||    
T  43319651 ttggattaggattttaaaagataatttttgtttaaaaaagttttgaggattttaaaagactttgca 43319586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 8408789 - 8408686
Alignment:
Q  216 gtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    |||||| ||||  ||||||||||| || |||   ||||||| | ||||| ||||||||||||||||| | || ||| |||||||| ||||||||||||||    
T  8408789 gtattgaattagaattttaaaggacaactttcacttaaaaatgtcttgaagattttaaaagactttgtatgaatttaatgactttcatgattttaaaaga 8408690  T
Q  316 ctat 319  Q
    ||||    
T  8408689 ctat 8408686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 9839992 - 9840079
Alignment:
Q  228 gattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    ||||||||| || ||||||||| |||||||| |||| ||||||||||| |||||| | |||||  |||||||| | ||||||||||||    
T  9839992 gattttaaaagacaatttttgtataaaaaagtcttgtggattttaaaaaactttgaaagatttgaatgacttttaagattttaaaaga 9840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 315
Target Start/End: Original strand, 28592990 - 28593104
Alignment:
Q  201 tagttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgacttt 300  Q
    |||| ||||| ||||||||||||||| ||||||||| || ||||||   | ||||| | |||| ||||||||||| ||| || | |||||| ||||||||    
T  28592990 tagtcttaggggggtgtattggattaggattttaaaagacaattttacatgaaaaaggtcttgtggattttaaaatactatgaaagattttaatgacttt 28593089  T
Q  301 gatgattttaaaaga 315  Q
     | ||||||||||||    
T  28593090 taagattttaaaaga 28593104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 28346554 - 28346641
Alignment:
Q  231 tttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    |||||| |||||||||||| |||||||| |||| ||||||| |||  || |||| |||||| |||||||| | ||||||||||||||||    
T  28346554 tttaaaagataatttttgtataaaaaagtcttgtggatttt-aaactctatgcaagattttaatgacttttaagattttaaaagactat 28346641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 30581991 - 30582104
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||| |||| || |||||| || ||||||||| | |||||| |||| ||||||||||||||| | ||  |||||  ||| ||| | || |    
T  30581991 aggagggtgtattgaatta-gaatttaaaagacaatttttgtatgaaaaagtcttgtggattttaaaagactatacataattttagtgatttttaagact 30582089  T
Q  308 ttaaaagactattaa 322  Q
    |||||||||||||||    
T  30582090 ttaaaagactattaa 30582104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 34228161 - 34228311
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34228161 gggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 34228260  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||| |||||    
T  34228261 aagactattaaggatttcaatgaatttaattcataagattttaaaggattt 34228311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 204 - 352
Target Start/End: Original strand, 40536558 - 40536706
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat 303  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  40536558 ttttaggagggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttggggattttaaaagactttgcaggattttgatgactttgat 40536657  T
Q  304 gattttaaaagactattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||||  | |||||||||||||||| ||||||||||||    
T  40536658 gattttaaaagactatataagatttcaatggatttaattcataagattt 40536706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 215 - 362
Target Start/End: Complemental strand, 25331757 - 25331610
Alignment:
Q  215 tgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaag 314  Q
    |||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25331757 tgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaag 25331658  T
Q  315 actattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  25331657 actattaaggatttcaatggatttaattcataagattttaaaggattt 25331610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 201 - 352
Target Start/End: Original strand, 41880582 - 41880733
Alignment:
Q  201 tagttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgacttt 300  Q
    |||| |||||| |||||||||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  41880582 tagtcttaggatggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcatgaggattttaaaagactttgcaagattttgatgacttt 41880681  T
Q  301 gatgattttaaaagactattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41880682 gatgattttaaaagactattaaggatttcaatggatttaattcataagattt 41880733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 7007964 - 7007814
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7007964 gggtgtattggattaggattttaaaagataatttttgtttaaaaaagtcttgaggattttaaaagactttgcagaattttgatgactttgatgattttaa 7007865  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||| |||||    
T  7007864 aagactattaaggatttcaatagatttaattcataagattttaaaggattt 7007814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 22202740 - 22202590
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22202740 gggtgtattggattaggattttaaaggacaatttttgtttaaagaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 22202641  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  22202640 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 22202590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 206 - 362
Target Start/End: Complemental strand, 3437211 - 3437055
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    |||||| ||||||||| |||| ||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  3437211 ttaggatggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagactttgctggattttgatgactttgatga 3437112  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  3437111 ttttaaatgactattaaggatttcaatggatttaattcataagattttaaatgattt 3437055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 205 - 362
Target Start/End: Complemental strand, 55975240 - 55975083
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||    
T  55975240 tttaggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttagatgattttgatgactttgatg 55975141  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||| ||| |||||    
T  55975140 attttaaaagactattaaagatttcaatggatttaattgataagattttaaaggattt 55975083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 30009290 - 30009444
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||| ||||||||||||| |||||||||||| ||||||| ||||||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30009290 aggagagtgtattggattaggattttaaaggacaatttttatttaaaaaagttttgagaattttaaaagactttggaggattttgatgactttgatgatt 30009389  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||    
T  30009390 ttaaaagactgttaaggatttcaatggatttaattcataagattttaaaggattt 30009444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 205 - 362
Target Start/End: Complemental strand, 32952319 - 32952162
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||| ||||||||||||| |  |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||     
T  32952319 tttaggggggtgtattggataagaattttaaaggataatttttgtttaaataagtcttgaggattttaaaagactttgtaggattttgatgactttgata 32952220  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||| ||| |||||    
T  32952219 attttaaaagactataaaagatttcaatggatttaattcataagattttaaaggattt 32952162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 42787293 - 42787139
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||||||||||||||    
T  42787293 aggagggtgtattggattagaattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaagattttgcagaatttttatgactttgatgatt 42787194  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| || |||| |||| ||| |||||    
T  42787193 ttaaaagactattaaggatttcaatggatttaatttataaaattttaaaggattt 42787139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 219 - 352
Target Start/End: Complemental strand, 47599417 - 47599284
Alignment:
Q  219 ttggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagacta 318  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  47599417 ttggattaggattttaaaggacaatttttgcttaaaaaagtcttaaggattttaaaagacttcggaggattttgatgactttgatgattttaaaagacta 47599318  T
Q  319 ttaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||||||||| ||||||||||||    
T  47599317 ttaaggatttcaatggatttaattcataagattt 47599284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 218 - 362
Target Start/End: Original strand, 39479133 - 39479277
Alignment:
Q  218 attggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagact 317  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||    
T  39479133 attggattagaattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagattttagaggattttgatgactttgatgattataaaagact 39479232  T
Q  318 attaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||| |||||||||| ||| |||||||| ||| |||||    
T  39479233 attaaggattttaatggatttaattcttaagattttaaaggattt 39479277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 203 - 362
Target Start/End: Original strand, 24130453 - 24130603
Alignment:
Q  203 gttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttga 302  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||         |||| |||||    
T  24130453 gttttaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgc---------atgattttga 24130543  T
Q  303 tgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  24130544 tgattttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 24130603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 208 - 352
Target Start/End: Complemental strand, 23465577 - 23465432
Alignment:
Q  208 aggagggtgtattggattacgatttt-aaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgat 306  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||||||| ||| || ||||||||||||| |||||||||||||| | |||||||||    
T  23465577 aggagggtgtattggattaggatttttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactctgcaggattttgattaatttgatgat 23465478  T
Q  307 tttaaaagactattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||    
T  23465477 tttaaaagattattaaggatttcaatagatttaattcataagattt 23465432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 27453704 - 27453858
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||||||  |||| ||||||||||||||| |||  |||||||||||||| || |||    
T  27453704 aggagggtgtattgaattaggattttaaatgataatttttgtttaaaaaagttttgaagattttaaaagacttagcataattttgatgactttaattatt 27453803  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||| ||||||||| |||||| |||||||| ||| ||| |||||    
T  27453804 ttaaaagactattaaagatttcaatagatttaattcataaggttttaaaggattt 27453858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 25446748 - 25446649
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25446748 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 25446649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 211 - 362
Target Start/End: Complemental strand, 28542162 - 28542020
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||||||||||||||         ||||    
T  28542162 agggtgtattggattaggattttaaaggataatttttgtttaaaaaagtattgagaattttaaaagactttggaggattttgatgac---------ttta 28542072  T
Q  311 aaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||| |||||    
T  28542071 aaagactattaaagatttcaatggatttaattcataagattttaaaggattt 28542020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 352
Target Start/End: Original strand, 46635241 - 46635367
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||         |||||||||||||||||||    
T  46635241 tattggattaggattttaaaggacaatttttgtttaaaaaagttttgaggattttaaaagactttgcaagat---------tttgatgattttaaaagac 46635331  T
Q  317 tattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||||||||||| ||||||||||||    
T  46635332 tattaaggatttcaatggatttaattcataagattt 46635367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 7246537 - 7246635
Alignment:
Q  202 agttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgacttt 300  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  7246537 agtttaaggagggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttggagaattttgatgacttt 7246635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 41321369 - 41321224
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||| | |||||||         ||||||    
T  41321369 aggagggtgtattggattaggattttaaaagatgatttttgtttaaaaaagtcttaaggattttaaaagactttggaagattttg---------atgatt 41321279  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||    
T  41321278 ttaaaagactattaaggatttcaatggatttaattcaaaagattttaaaggattt 41321224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 49469890 - 49469745
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||||         ||||||    
T  49469890 aggagggtgtattggattagaattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaggactttgaaggattttg---------atgatt 49469800  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||| ||| |||||    
T  49469799 ttaaaagactattaacgatttcaatgaatttaattcataagattttaaaggattt 49469745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 31314418 - 31314565
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||| | |||         ||||||||    
T  31314418 ttaggggggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtattgaggattttaaaagactttgtaagat---------tttgatga 31314508  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||| ||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  31314509 ttttaaaaaactattaaggatttcaatggatttaatttataagattttaaaggattt 31314565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 362
Target Start/End: Original strand, 37046091 - 37046234
Alignment:
Q  210 gagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttt 309  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||  |||| ||||||||||||||||| |||||         ||||||||||||    
T  37046091 gagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtattgatgattttaaaagactttggaggat---------tttgatgatttt 37046181  T
Q  310 aaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||| |||||||||||||| |||||| |||||||||||| ||| |||||    
T  37046182 aaaagactgttaaggatttcaatagatttaattcataagattttaaaggattt 37046234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 1113756 - 1113662
Alignment:
Q  268 ttttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||| ||| |||||    
T  1113756 ttttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaacattttaatggatttaattcataagattttaaaggattt 1113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 16020729 - 16020589
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||     ||||||||||||||||||| ||||||| |||||         ||    
T  16020729 aggagggtgtattggattagaattttaaaggacaatttttgtttaaaaaag-----aggattttaaaagactttggaggatttagatga---------tt 16020644  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  16020643 ttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 16020589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 44770485 - 44770592
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||||  || | |||||||||||| ||||  ||||||| |||||||||||||||||||    
T  44770485 gggtgtattgaattatgattttaaaggacaatttttgtttaaaaaagttttaaagattttaaaagattttgttggattttaatgactttgatgattttaa 44770584  T
Q  312 aagactat 319  Q
    ||||||||    
T  44770585 aagactat 44770592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 9163773 - 9163671
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagcctt-gaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | ||| ||||||||||||||| ||| || |||||| |||||||| |||||||||||    
T  9163773 gtgtattggattatgattttaaaagataatttttgtttaaaaatgtctttgaggattttaaaagattttccatgattttaatgacttttatgattttaaa 9163674  T
Q  313 aga 315  Q
    |||    
T  9163673 aga 9163671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 26340654 - 26340557
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||||||| |||||||||||| ||||||| |||||||| | ||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  26340654 ggtgtattggattaggattttaaaggacaatttttatttaaaaa-gtcttaaggattttaaaagactttgcatgattttaatgactttcatgattttaa 26340557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 5105035 - 5104924
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| || ||||||   | ||||||| |||| |||||||||||||||||| | |||||| |||||||| | ||||||||    
T  5105035 gggtgtattggattaggattttaaaagacaattttgtataaaaaaagtcttgtggattttaaaagactttgaaagattttaatgacttttaagattttaa 5104936  T
Q  312 aagactattaag 323  Q
    ||||||||||||    
T  5104935 aagactattaag 5104924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 20022030 - 20021923
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| || ||||||| | |||||||| ||||||||| ||  | |||||||||||| |||| |||||||| |||||||| ||||||||||    
T  20022030 gggtgtattggattatgactttaaagaacaatttttgcttaaaaaagtctcaaagattttaaaagattttgtaggattttaatgactttcatgattttaa 20021931  T
Q  312 aagactat 319  Q
    ||||||||    
T  20021930 aagactat 20021923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 42722041 - 42721943
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| | ||||| |||||||| | ||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  42722041 gggtgtattggattaagattttaaaggacattttttatttaaaaa-gtcttaaggattttaaaagactttgcatgattttaatgactttcatgattttaa 42721943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 11090866 - 11090758
Alignment:
Q  212 gggtgtattggattacgat-tttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    |||||||||||||||  || ||||||||| ||| |||| ||||||||| ||||| |||||||||||| |||| | |||||  |||||||| |||||||||    
T  11090866 gggtgtattggattagaatctttaaaggacaatgtttgcttaaaaaagtcttgaagattttaaaagattttgtatgatttcaatgactttcatgatttta 11090767  T
Q  311 aaagactat 319  Q
    |||||||||    
T  11090766 aaagactat 11090758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 36478837 - 36478920
Alignment:
Q  236 aggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    |||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||||| |||||||| | | ||||||||||||||    
T  36478837 aggacaatttttgcttaaaaaagtcttgaagattttaaaagactttgtaggattttaatgactttcacggttttaaaagactat 36478920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 7249548 - 7249625
Alignment:
Q  218 attggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatga 296  Q
    ||||||||| |||||||| |||||||||||||||||||||  ||| || |||||||||||| |||||||||||||||||    
T  7249548 attggattaggattttaatggataatttttgtttaaaaaaatctttagtattttaaaagac-ttgcaggattttgatga 7249625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 8712429 - 8712363
Alignment:
Q  215 tgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagacttt 281  Q
    |||||||||||| |||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||    
T  8712429 tgtattggattatgattttaaaggacaatttttgcttaaaaaagtcttgaagattttaaaagacttt 8712363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 41581433 - 41581536
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    ||||||||| |||| |||||||||  | ||||||| |||||||||| |||||| | |||||||||||||| |  ||||| |||||| | |||||||||||    
T  41581433 ggtgtattgaattatgattttaaataacaatttttatttaaaaaagtcttgagaaatttaaaagactttgtataattttaatgactctcatgattttaaa 41581532  T
Q  313 agac 316  Q
    ||||    
T  41581533 agac 41581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 7246785 - 7246847
Alignment:
Q  300 tgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||    
T  7246785 tgatgactttaaaagattattatggatttcaatggatttaattcataagattttaaaggattt 7246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 16019903 - 16019849
Alignment:
Q  265 ggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    |||||||||||||||||||| |||||| |||||||| | ||||||||||||||||    
T  16019903 ggattttaaaagactttgcaagattttcatgacttttaagattttaaaagactat 16019849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 21309041 - 21309151
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| ||||| |||| |||||||||  | ||  | ||||||||||| ||| |  ||||| |||||||| | ||||||||    
T  21309041 gggtgtattggattaagattttaaaagataaattttatttaaaaaaatcatgtaggttttaaaagacattgtaaaattttaatgacttttaagattttaa 21309140  T
Q  312 aagactattaa 322  Q
    || ||||||||    
T  21309141 aacactattaa 21309151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 315
Target Start/End: Complemental strand, 28371501 - 28371399
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    ||||||||| |||| |||||||||||| |||||||| |||||||||  || |  ||||||||| | |||  || ||||| |||||||||||| |||||||    
T  28371501 ggtgtattgaattaggattttaaaggacaatttttgcttaaaaaagttttaaacattttaaaatattttctagaattttaatgactttgatggttttaaa 28371402  T
Q  313 aga 315  Q
    |||    
T  28371401 aga 28371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 1045390 - 1045321
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaag-ccttgaggattttaaaagacttt 281  Q
    |||||||||||||   ||||||| |||||||||||||||||||||| | || ||||||||||||||||||    
T  1045390 ggtgtattggattggaattttaatggataatttttgtttaaaaaagtctttaaggattttaaaagacttt 1045321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 19740805 - 19740856
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaag 258  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||    
T  19740805 ttaggagggtgtatcggattaggattttaaaggataa-ttttgtttaaaaaag 19740856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 28099685 - 28099825
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| |||| ||||||||| || ||||||||| | |||||| ||     ||||||||||| | |||| |||||| |||||||| |  |||||||    
T  28099685 gggtgtattgaattaggattttaaaagacaatttttgtatgaaaaagtctaataaattttaaaagattatgcaagattttaatgacttttagaattttaa 28099784  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    || | | | ||||||||||| |||||||| || ||||||||    
T  28099785 aaaattctcaaggatttcaagggatttatatcttaagattt 28099825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 8712368 - 8712302
Alignment:
Q  295 gactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||| |||||||||||||||||| | |||||||||||||||||  ||||||||||| ||| |||||    
T  8712368 gactttcatgattttaaaagactatca-ggatttcaatggatttacatcataagattttaaaggattt 8712302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 45341664 - 45341586
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggatttt 291  Q
    |||||||||| ||||  ||||||||||| ||||||||||| |||| | ||| || |||||||||||||||||| ||||||    
T  45341664 gggtgtattgcattagaattttaaaggacaatttttgttt-aaaaggtcttaagaattttaaaagactttgcatgatttt 45341586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 12913935 - 12913889
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaag 258  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||    
T  12913935 gggtgtattggattaagattttaaaggacaatttttgcttaaaaaag 12913889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 53276440 - 53276395
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgttt 251  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||    
T  53276440 ttaggagggtgtattggattagaattttaaatgataatttttgttt 53276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 315
Target Start/End: Original strand, 37369433 - 37369535
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||  | ||||||   | ||||| | || | ||||||||||||||| |||| |||||| |||||||| | ||||||||    
T  37369433 gggtgtattggattaggattttaaaaaacaattttacatgaaaaa-gtctagtggattttaaaagactatgcaagattttaatgacttttaagattttaa 37369531  T
Q  312 aaga 315  Q
    ||||    
T  37369532 aaga 37369535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 328
Target Start/End: Complemental strand, 53276358 - 53276328
Alignment:
Q  298 tttgatgattttaaaagactattaaggattt 328  Q
    |||||||||||||||||||||||||||||||    
T  53276358 tttgatgattttaaaagactattaaggattt 53276328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 1045323 - 1045266
Alignment:
Q  306 ttttaaaagactattaaggatttcaatgga-tttatttcataagatttgaaatgattt 362  Q
    |||||||||| ||||||||||||||||||| |||  |||||||||||| ||| |||||    
T  1045323 ttttaaaagattattaaggatttcaatggattttgattcataagattttaaaggattt 1045266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 53276383 - 53276351
Alignment:
Q  264 aggattttaaaagactttgcaggattttgatga 296  Q
    ||||||||||||||||||| |||||||||||||    
T  53276383 aggattttaaaagactttggaggattttgatga 53276351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 7e-65; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 217 - 378
Target Start/End: Original strand, 6131014 - 6131175
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||| ||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131014 tattagattaagattttaaaggacaatttttgtttaaaaaagtctttaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 6131113  T
Q  317 tattaaggatttcaatggatttatttcataagatttgaaatgattttattgatttcaagaga 378  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||    
T  6131114 tattaaggatttaaatggatttaattcataagatttgaaatgattttatgaatttcaagaga 6131175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 212 - 378
Target Start/End: Original strand, 3999149 - 3999316
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3999149 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 3999248  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt-tattgatttcaagaga 378  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||  | |||||||||||||    
T  3999249 aagactattaaggatttcaatggatttaattcataagattttaaaggatttgaaatgatttcaagaga 3999316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 211 - 362
Target Start/End: Complemental strand, 19254582 - 19254431
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19254582 agggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaagattttaaaagactttgcaagattttgatgactttgatgatttta 19254483  T
Q  311 aaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19254482 aaagactattaaggatttcaatggatttaattcataagattttaaatgattt 19254431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 209 - 352
Target Start/End: Complemental strand, 54626185 - 54626042
Alignment:
Q  209 ggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattt 308  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54626185 ggaggatgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgattt 54626086  T
Q  309 taaaagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  54626085 taaaagactactaaggatttcaatggatttaattcataagattt 54626042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 995477 - 995634
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||| ||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  995477 tttaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagactttgcaagattttgatgactttgatg 995576  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  995577 attttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 995634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 44761619 - 44761759
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44761619 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtaggattttgatgactttgatgattttaa 44761718  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  44761719 aagactattaaggatttcaatagatttaattcataagattt 44761759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 33995991 - 33996141
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  33995991 gggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtcttgagaattttaaaagactttgcaaaattttgatgactttgatgattttaa 33996090  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  33996091 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 33996141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 213 - 362
Target Start/End: Original strand, 33807165 - 33807314
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  33807165 ggtgtattggattaggattttaaaggacaatttttatttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaa 33807264  T
Q  313 agactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  33807265 agactattaaggatttcaatggatttaattcataagattttaaaggattt 33807314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 51699054 - 51699199
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51699054 tattggattatgattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgcaagattttgatgactttgatgattttaaaagac 51699153  T
Q  317 tattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||||    
T  51699154 tattaaggatttcaatggatttaattaataagattttaaaggattt 51699199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 6590191 - 6590037
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  6590191 aggagggtgtattggattaggattttaaaggacaatttttgtttaagaaagtcttgaggattttaaaagactttagaggattttgatgactttgatggtt 6590092  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    || |||||||||||||||||||||| |||||| |||||||||||| ||| |||||    
T  6590091 tttaaagactattaaggatttcaatcgatttaattcataagattttaaaggattt 6590037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 20498898 - 20498753
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||     
T  20498898 tattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattatgatgactttgatgattttaaaagaa 20498799  T
Q  317 tattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    || |||||||||||||||||||| |||||||||||| ||| |||||    
T  20498798 taataaggatttcaatggatttaattcataagattttaaaggattt 20498753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 29448437 - 29448586
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  29448437 gggtgtattggattaggattttaaaaaacaatttttgtttaaaaaagtcttgagaattttaaaagactttgcaagattttgatgactttga-gattttaa 29448535  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  29448536 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 29448586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 208 - 351
Target Start/End: Original strand, 10138721 - 10138864
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||  ||| |||||||||||||||||||  |||||||||| | ||||||||||    
T  10138721 aggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaattcttaaggattttaaaagactttgatggattttgattaatttgatgatt 10138820  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatt 351  Q
    |||||||| ||||||||||||||||||||||| |||||||||||    
T  10138821 ttaaaagattattaaggatttcaatggatttaattcataagatt 10138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 53058410 - 53058613
Alignment:
Q  1 gctctctcaaagttcatgagataaattatgttttaaaagatgttatatttattatattgttgg---nnnnnnnnnnnagttttctccgtcttaaaattat 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||     
T  53058410 gctctctcaaagttcatgagataaattatgttttaaaagatgttatatttattatattgttggttttttttttttttagttttctccgtcttaaaattaa 53058509  T
Q  98 aattatgtttgttactacaaagaataaattgaaagtgtgtatttattatactagnnnnnnnnattttataaagagtatactagtttgttatcaccggaga 197  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||| |||  |||||    
T  53058510 aattatgtttgt---tacaaagaataaattgaaagtgtgtatttattatactagtttt-----tttcataaagagtatactagtttgttgtcagtggaga 53058601  T
Q  198 gattagttttag 209  Q
    ||||||||||||    
T  53058602 gattagttttag 53058613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 205 - 362
Target Start/End: Complemental strand, 35338384 - 35338227
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| | |||||||||||||||||  |||||||||| | |||||||    
T  35338384 tttaggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaatgattttaaaagactttgatggattttgattaatttgatg 35338285  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||| | ||||||||||||||||||||||| || ||||||||| ||| |||||    
T  35338284 attttaaaatattattaaggatttcaatggatttaatttataagattttaaaggattt 35338227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 211 - 362
Target Start/End: Complemental strand, 25419054 - 25418912
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||         || ||||||||||    
T  25419054 agggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttggaggat---------ttggatgatttta 25418964  T
Q  311 aaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  25418963 aaagactattaaggatttcaatggatttaattcataagattttaaaggattt 25418912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 209 - 362
Target Start/End: Complemental strand, 40247429 - 40247285
Alignment:
Q  209 ggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattt 308  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||         |||||||    
T  40247429 ggagagtgtattggatttggattttaaaggataatttttgtttaaaaaagtgttgaggattttaaaagactttggaggattttg---------atgattt 40247339  T
Q  309 taaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  40247338 taaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 40247285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 204 - 362
Target Start/End: Original strand, 16008091 - 16008240
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgat 303  Q
    ||||||| ||| ||||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| |||         ||||||    
T  16008091 ttttaggggggcgtattggattaggattttaaaggtcaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagat---------tttgat 16008181  T
Q  304 gattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||| ||| |||||    
T  16008182 gattttaaaagacaattaaggatttcaatggatttaattcacaagattttaaaggattt 16008240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 201 - 352
Target Start/End: Original strand, 53928639 - 53928780
Alignment:
Q  201 tagttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgacttt 300  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||         |||    
T  53928639 tagttttagg-gggtgtattggattagaattttaaaggataatttttgtttaaaaaagtgttgagaattttaaaagactttgcaagat---------ttt 53928728  T
Q  301 gatgattttaaaagactattaaggatttcaatggatttatttcataagattt 352  Q
    ||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  53928729 gatgattttaaaagattattaaggatttcaatggatttaattaataagattt 53928780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 6976294 - 6976187
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| |||||||||||| |||||||| ||||||||| ||  ||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  6976294 gggtgtatttgattatgattttaaaggacaatttttgcttaaaaaagtctcaaggattttaaaagactttgtaggattttaatgacttttatgattttaa 6976195  T
Q  312 aagactat 319  Q
    ||||||||    
T  6976194 aagactat 6976187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 52080648 - 52080503
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaa----aaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||| |||||||||||| ||||||| |||      ||||| ||||| ||||||||||||||||||| |||||||||||         ||    
T  52080648 gggtgtattggattatgattttaaaggacaatttttttttttttttaaaagtcttgaagattttaaaagactttgcaagattttgatga---------tt 52080558  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  52080557 ttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 52080503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 362
Target Start/End: Original strand, 1439521 - 1439655
Alignment:
Q  219 ttggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagacta 318  Q
    |||||||| |||||||||||| |||||||||||||||||  ||| ||||||||||||||||||  |||||         || ||||||||||||||||||    
T  1439521 ttggattaggattttaaaggacaatttttgtttaaaaaaatcttaaggattttaaaagactttagaggat---------ttggatgattttaaaagacta 1439611  T
Q  319 ttaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||| ||||| || ||||||||| ||| |||||    
T  1439612 ttaaggatttcaatgtatttaatttataagattttaaaggattt 1439655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 205 - 323
Target Start/End: Complemental strand, 7319180 - 7319063
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||| ||||||||||||||| ||||||||| || |||||| || |||||||  |||| |||||||||||||||||| | |||||| |||||||| | |    
T  7319180 tttaggggggtgtattggattaggattttaaaagacaatttt-gtataaaaaaatcttgtggattttaaaagactttgaaagattttaatgacttttaag 7319082  T
Q  305 attttaaaagactattaag 323  Q
    |||||||||||||||||||    
T  7319081 attttaaaagactattaag 7319063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 46174824 - 46174719
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaa 313  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||  ||||| ||||||||||| |||||| |||||| | |||||| | ||||||||||    
T  46174824 gtgtattcgattaggattttaaaagataatttttgtttaaaaaagttttgagaattttaaaagattttgcatgattttaaggacttttaagattttaaaa 46174725  T
Q  314 gactat 319  Q
    ||||||    
T  46174724 gactat 46174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 3205599 - 3205668
Alignment:
Q  293 atgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  3205599 atgattttgatgattttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 3205668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 50899253 - 50899360
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| ||||| |||||| |||||||| ||||||||| ||  | |||||||||||| |||| |||||||| |||| ||| ||||||||||    
T  50899253 gggtgtattagattaggatttcaaaggacaatttttgcttaaaaaagtctcaaagattttaaaagattttgtaggattttaatgatttttatgattttaa 50899352  T
Q  312 aagactat 319  Q
    ||||||||    
T  50899353 aagactat 50899360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 15492405 - 15492512
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||||||||  ||||||||||| |||||||| |||||||||  |  | |||||||||||| |||| | |||||| |||| ||| ||||||||||    
T  15492405 gggtgtattggattagaattttaaaggacaatttttgcttaaaaaagtttcaaagattttaaaagattttgtatgattttaatgattttcatgattttaa 15492504  T
Q  312 aagactat 319  Q
    ||||||||    
T  15492505 aagactat 15492512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 37820392 - 37820450
Alignment:
Q  298 tttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaa 356  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  37820392 tttgattattttaaaagattattaaggatttcaatggatttaattcataagatttgaaa 37820450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 52115181 - 52115058
Alignment:
Q  230 ttttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttc 329  Q
    |||||||||| |||||||||||||||||| ||| || |||||||||||||||  |||||||||         |||||||||||||| |||| | ||||||    
T  52115181 ttttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactttataggattttg---------atgattttaaaagattattgaagatttc 52115091  T
Q  330 aatggatttatttcataagatttgaaatgattt 362  Q
    |||| ||||| |||| ||||||| ||| |||||    
T  52115090 aatgtatttaattcacaagattttaaaggattt 52115058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 539341 - 539445
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||||||||  ||||| ||||| |||||||| ||||||||| || || |||||||||||||||||  ||| ||| |||||||| ||||||||||    
T  539341 gggtgtattggattagcatttttaagga-aatttttgcttaaaaaagtctcgaagattttaaaagactttg-tgga-tttaatgactttcatgattttaa 539437  T
Q  312 aagactat 319  Q
    ||||||||    
T  539438 aagactat 539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 45135793 - 45135682
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| ||||||||| || ||||||   | ||||||| |||| | |||||||||||||||| | |||||| |||||||| |  |||||||    
T  45135793 gggtgtatttgattaggattttaaaagacaattttgtataaaaaaagtcttgtgtattttaaaagactttgaaagattttaatgacttttaaaattttaa 45135694  T
Q  312 aagactattaag 323  Q
    ||||||||||||    
T  45135693 aagactattaag 45135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 12108177 - 12108123
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaag 258  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  12108177 ttttaggagggtgtattggattaggattttaaaggacaatttttgcttaaaaaag 12108123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 6034685 - 6034775
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatga 296  Q
    |||||| ||||||||| |||| ||||||||| || ||| |||| ||||||||| || | |||||||||||||||||| | |||||| ||||    
T  6034685 ttaggatggtgtattgaattaggattttaaaagacaatgtttgcttaaaaaagtctcgtggattttaaaagactttgtatgattttaatga 6034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 37820319 - 37820389
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagac 278  Q
    |||||||||||||| |||| |||||||||  | || ||||||||||||| |||||||| ||||||||||||    
T  37820319 aggagggtgtattgaattaggattttaaataacaaattttgtttaaaaaggccttgagaattttaaaagac 37820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 27899800 - 27899756
Alignment:
Q  269 tttaaaagactttgcaggattttgatgactttgatgattttaaaa 313  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  27899800 tttaaaagattttgcaggattttaatgactttgatgattttaaaa 27899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 39842117 - 39842161
Alignment:
Q  210 gagggtgtattggattacgattttaaaggataatttttgtttaaa 254  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  39842117 gagggtgtattggattaggattttaaaggataatttttgcttaaa 39842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 12104148 - 12104045
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagc-cttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    ||||||||||  |||||| |||| |||||||| ||||||||   ||  | |||||||||||| |||  |||||||| |||||||| ||||||||||||||    
T  12104148 tattggattaaaattttagaggaaaatttttgcttaaaaaaattctcaaagattttaaaagattttataggattttaatgactttcatgattttaaaaga 12104049  T
Q  316 ctat 319  Q
    ||||    
T  12104048 ctat 12104045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 23535665 - 23535731
Alignment:
Q  253 aaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    |||||| |||||  ||||||||||| |||||| |||||| | |||||| |||||||||||| |||||    
T  23535665 aaaaagtcttgataattttaaaagattttgcatgattttaacgacttttatgattttaaaaaactat 23535731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 371
Target Start/End: Complemental strand, 44277660 - 44277571
Alignment:
Q  284 aggattttgatgactttgatgattttaaaagactattaaggatttcaa--tggatttatttcataagatttgaaatgattttattgattt 371  Q
    |||||||| |||||||| |||||||||||| ||||| | |  ||||||  ||||||||  ||||||||||| ||| |||||||| |||||    
T  44277660 aggattttaatgactttcatgattttaaaacactatcaggattttcaatttggatttacatcataagattttaaaagattttatggattt 44277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 5826091 - 5825996
Alignment:
Q  223 attacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    |||| |||| ||| ||| |||||||||||||||  | |||||| ||||||||||| |||| |  ||||| |||| ||| ||||||||||||| ||||    
T  5826091 attaggattgtaagggacaatttttgtttaaaag-gtcttgagaattttaaaagattttgtaaaattttaatgattttcatgattttaaaagcctat 5825996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 28145618 - 28145678
Alignment:
Q  223 attacgattttaaaggataatttttgtttaaaaaa-gccttgaggattttaaaagactttg 282  Q
    |||| ||||||||| || ||||||||| ||||||| | |||| ||||||||||||||||||    
T  28145618 attaggattttaaaagacaatttttgtataaaaaaagtcttgtggattttaaaagactttg 28145678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 38772586 - 38772550
Alignment:
Q  222 gattacgattttaaaggataatttttgtttaaaaaag 258  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  38772586 gattaggattttaaaggacaatttttgtttaaaaaag 38772550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 44277717 - 44277677
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaa 257  Q
    |||||||||| ||||||||| ||||||||||| ||||||||    
T  44277717 tattggattaggattttaaaagataatttttgcttaaaaaa 44277677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 46750063 - 46750027
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttg 248  Q
    ||||||||||||||||||||||||| || ||||||||    
T  46750063 gggtgtattggattacgattttaaaagacaatttttg 46750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 55235565 - 55235517
Alignment:
Q  323 ggatttcaatggatttatttcataagatttgaaatgattttattgattt 371  Q
    |||||| ||||||||||  ||||||||||| |||||||||||| |||||    
T  55235565 ggattttaatggatttacgtcataagattttaaatgattttatggattt 55235517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 21136584 - 21136740
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  21136584 ttaggggggtgttttggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtaggattttgatgactttgatga 21136683  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  21136684 ttttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 21136740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 212 - 378
Target Start/End: Complemental strand, 32125943 - 32125776
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  32125943 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgtagaattttgatgactttgatgattttaa 32125844  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt-tattgatttcaagaga 378  Q
    ||||||||||||||| ||||| |||||| |||||||||||| ||| |||||  | |||||||||||||    
T  32125843 aagactattaaggatgtcaatagatttaattcataagattttaaaggatttgaaatgatttcaagaga 32125776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 22551375 - 22551525
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22551375 gggtgtattggattaagattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 22551474  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||| |||||||||||||||||||||| || ||||||||| ||| |||||    
T  22551475 aagaccattaaggatttcaatggatttaatttataagattttaaaggattt 22551525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 24776971 - 24776821
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24776971 gggtgtattggattaggattttaaaggacaatttttctttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 24776872  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  24776871 aagactattaaggatttcaatggatttaatttataagattttaaaggattt 24776821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 205 - 362
Target Start/End: Complemental strand, 9120795 - 9120638
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||| ||||||     
T  9120795 tttaggagggtgtattagattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagacttttaaagattttgatgattttgata 9120696  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  9120695 attttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 9120638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 44766551 - 44766401
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| |||| ||||||||| || |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  44766551 gggtgtattgaattaggattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaa 44766452  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  44766451 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 44766401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 31170101 - 31170246
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31170101 tattggattaggattttaaaggacaatttttgttttaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaagac 31170200  T
Q  317 tattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||| |||||| |||||||||||| ||| |||||    
T  31170201 tattaaggatttcaatagatttaattcataagattttaaaggattt 31170246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 305093 - 305246
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  305093 aggagggtgtattggattaggattttaaag-acaatttttgtttaaaaaaatcttgaggattttaaaagactttgcagggttttgataactttgaagatt 305191  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  305192 ttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 305246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 212 - 352
Target Start/End: Complemental strand, 16270447 - 16270305
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgttt-aaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16270447 gggtgtattggattaggattttaaaggataattttttttttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgatttta 16270348  T
Q  311 aaagactattaaggatttcaatgga-tttatttcataagattt 352  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  16270347 aaagactattaaggatttcaatggattttaattcataagattt 16270305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 209 - 362
Target Start/End: Complemental strand, 43848277 - 43848124
Alignment:
Q  209 ggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattt 308  Q
    |||||||||||||||||| ||||||||| || |||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  43848277 ggagggtgtattggattatgattttaaaagacaatttttgtttaaaaaaatcttgagaattttaaaagactttacaggattttgatgacttagatgattt 43848178  T
Q  309 taaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||| |||||    
T  43848177 taaaagactattaaggatttcaatagatttaattcataagattttaaaggattt 43848124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 206 - 362
Target Start/End: Complemental strand, 35317790 - 35317634
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||| | ||||||||| ||||||||||    
T  35317790 ttaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtattgaggattttaaaagactttgtaagattttgattactttgatga 35317691  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||| ||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  35317690 ttttaaaaaactattaaggatttcaatggatttaattaataagattttaaaggattt 35317634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 14198189 - 14198334
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||||||||| |||||||||| | ||||||||||||||||||  ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  14198189 tattggattaggattttaaagaacaatttttgtttaaaaaagttttgaggattttaaaagactttacaaaattttgatgactttgatgattttaaaagac 14198288  T
Q  317 tattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||| |||||||||| |||||||||||| ||| |||||    
T  14198289 tattaaggattttaatggatttaattcataagattttaaaggattt 14198334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 12408042 - 12407901
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||         ||||||||||    
T  12408042 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttg---------atgattttaa 12407952  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  12407951 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 12407901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 12420102 - 12419961
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||         ||||||||||    
T  12420102 gggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttg---------atgattttaa 12420012  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  12420011 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 12419961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 338
Target Start/End: Complemental strand, 1790081 - 1789960
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagac 316  Q
    |||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  1790081 tattagattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgtaagattttgatgactttgatgattttaaaagac 1789982  T
Q  317 tattaaggatttcaatggattt 338  Q
    |||||||||||| || ||||||    
T  1789981 tattaaggattttaaaggattt 1789960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 11997195 - 11997293
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||  || ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  11997195 gggtgtattggattatgattttaaaggataatttttgttt-aaaaagttttaaggattttaaaagactttgcatgattttaatgactttcatgattttaa 11997293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 20605603 - 20605528
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagacttt 281  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20605603 ttaggggggtgtattggattaggattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagacttt 20605528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 26600885 - 26600972
Alignment:
Q  228 gattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||| |||||  |||| |||||| |||||||||||    
T  26600885 gattttaaaggataatttttgtttaaaaaaatcttgaggattttacaagattttgcaagatttccatgattttgattattttaaaaga 26600972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 20156345 - 20156485
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| ||  |||||||| | |||||| || |  |||||||||||| | || | |||||| |||||||| | ||||||||    
T  20156345 gggtgtattggattaggattttaaaagactatttttgtatgaaaaagtctagtagattttaaaagattatgtaagattttaatgacttttaggattttaa 20156444  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  20156445 aagattctcaaggatttcaagggatttatatcttaagattt 20156485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 34027518 - 34027658
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| ||||||||| ||| |||||||| | |||||  || | | ||||||||||| | |||| |||||| |||||||| | ||||||||    
T  34027518 gggtgtatttgattaggattttaaaagattatttttgtatgaaaaaatctagtgaattttaaaagattatgcaagattttaatgacttttaggattttaa 34027617  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  34027618 aagattctcaaggatttcaagggatttatatcttaagattt 34027658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 321
Target Start/End: Original strand, 13436091 - 13436183
Alignment:
Q  229 attttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactatta 321  Q
    |||||||||||||| ||||||||||||||| ||| | | |||||||| | |||  |||||||| |||||||| |||||||||||| |||||||    
T  13436091 attttaaaggataaattttgtttaaaaaagtcttcaaggttttaaaaaaatttataggattttaatgactttcatgattttaaaaaactatta 13436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 1188677 - 1188776
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| || ||||||||| | |||||| ||   | ||||||||||| | |||| |||||  |||||||| | ||||||||    
T  1188677 gggtgtattggattaggattttaaaagaaaatttttgtatgaaaaagtctaatgaattttaaaagattatgcaagatttgaatgacttttaagattttaa 1188776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 21988310 - 21988247
Alignment:
Q  252 aaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    |||||||  ||| |||||||||||||||||| | |||||| |||||||| | ||||||||||||    
T  21988310 aaaaaagtgttgtggattttaaaagactttgaaagattttaatgacttttaagattttaaaaga 21988247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 27637524 - 27637428
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    |||||| ||||||| |||||||||||| || |    ||||||||| ||||||  ||||||||| ||||||||| |||||  | ||||| |||||||||||    
T  27637524 ggtgtactggattatgattttaaaggacaact----tttaaaaaaaccttgaaaattttaaaaaactttgcagaattttattaactttaatgattttaaa 27637429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 203 - 362
Target Start/End: Original strand, 19451273 - 19451432
Alignment:
Q  203 gttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttga 302  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  19451273 gtttaaggggggtgtattggattatgattttaaaggataatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttga 19451372  T
Q  303 tgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||    
T  19451373 tgattttaaaagactattaaggatttcaatggatttaattcaaaagattttaaaggattt 19451432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 956169 - 956015
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||||||||||||||||  |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  956169 aggagggtgtattggattagaattttaaaagacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatgactttgatgatt 956070  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  956069 ttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 956015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 6303776 - 6303926
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6303776 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatgactttgatgattttaa 6303875  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||| |||||    
T  6303876 aagactaataaggatttcaatggatttaattcataagattttaaaggattt 6303926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 47781352 - 47781201
Alignment:
Q  212 gggtgtattggattacgattttaaaggataattttt-gtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatttta 310  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47781352 gggtgtattggattaggattttaaaagataattttttgtttaaaaaagtcttgaggattttaaaagactttgcagggttttgatgactttgatgatttta 47781253  T
Q  311 aaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  47781252 aaagactattaaggatttcaatggatttaattcataagattttaaaggattt 47781201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 212 - 362
Target Start/End: Complemental strand, 730780 - 730630
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  730780 gggtgtattgaattaggattttaaaggataatttttgtttaaaaaaatcttgatgattttaaaagactttgcaagattttgatgactttgataattttaa 730681  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  730680 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 730630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 35678762 - 35678910
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| |||||||| |||||||||||||||||||  | |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  35678762 gggtgtattggattaggattttaacggataatttttgtttaaaa--gtcttgaggattttgaaagactttgtaggattttgatgactttgatgattttaa 35678859  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  35678860 aagactattaaggatttcaatggatttaattcataagattttaaaggattt 35678910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 28823883 - 28824033
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    |||||||||||||||  |||| |||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28823883 gggtgtattggattaatatttcaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgtaagattttgatgactttgatgattttaa 28823982  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  28823983 aagactattaaggatttcaatggatttaatttataagattttaaaggattt 28824033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 212 - 362
Target Start/End: Original strand, 49197762 - 49197912
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  49197762 gggtgtattggattaggattttaaaagacaatttttgtttaaaaaagttttgaggattttaaaagactttgcaaaattttgatgactttgatgattttaa 49197861  T
Q  312 aagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||| |||||    
T  49197862 aagactattaaggatttcaatagatttaattcataagattttaaaggattt 49197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 206 - 362
Target Start/End: Complemental strand, 35280369 - 35280212
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  35280369 ttaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgattacttttatga 35280270  T
Q  306 ttttaaaagactattaaggatttcaatgga-tttatttcataagatttgaaatgattt 362  Q
     ||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||    
T  35280269 atttaaaagactattaaggatttcaatggattttaattcataagattttaaaggattt 35280212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 205 - 362
Target Start/End: Original strand, 45759452 - 45759609
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatg 304  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||||  ||||||||||||||||||    
T  45759452 tttaggggggtgtattggattaggattttaaaggacaatttttgtttgaaaaagttttgaggattttaaaagactttgcaacattttgatgactttgatg 45759551  T
Q  305 attttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||||||| ||| |||||    
T  45759552 attttaaaagactattaaggaattcaatgaatttaattcataagattttaaaggattt 45759609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 50192068 - 50192222
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||  |||||||||| | ||||||||||    
T  50192068 aggagggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgatggattttgattaatttgatgatt 50192167  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||| | ||||||||||||||||||||||| |||||||||||| ||| |||||    
T  50192168 ttaaaatattattaaggatttcaatggatttaattcataagatttaaaaggattt 50192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 47653843 - 47653989
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaa-gccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    |||||||||| |||||||||| | ||||||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47653843 tattggattaggattttaaagaacaatttttgtttaaaaaaagttttgaggattttaaaagactttgcaagattttgatgactttgatgattttaaaaga 47653942  T
Q  316 ctattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  47653943 ctattaagaatttcaatggatttaattcataagattttaaaggattt 47653989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 31571839 - 31571995
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||||||||||  ||||| |||||||||||||||| ||||||||||| ||||||||||    
T  31571839 ttaggagggtgtattagattagaattttaaaggacaatttttgtttaaaaaagttttgagaattttaaaagactttggaggattttgataactttgatga 31571938  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||| |||| |||||||||||||||| ||  |||||||| ||| |||||    
T  31571939 ttttaaaagactgttaaagatttcaatggatttaattagtaagattttaaaggattt 31571995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 207 - 362
Target Start/End: Complemental strand, 48525183 - 48525037
Alignment:
Q  207 taggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgat 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||         |||||    
T  48525183 taggagggtgtattggattaggattttaaaggataatttttgtttaaaaatgacttgaggattttaaaagattttgcaggattttg---------atgat 48525093  T
Q  307 tttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||| ||| |||||    
T  48525092 tttaaaagactattaagaatttcaatagatttaattcataagattttaaaggattt 48525037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 362
Target Start/End: Complemental strand, 49418670 - 49418523
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    ||||||||||| ||| |||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||         ||||    
T  49418670 ttaggagggtgcattagattagaattttaaaggataatttttgtttaaaaaaatcttgaggattttaaaagactttgaaggattttg---------atga 49418580  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  49418579 ttttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 49418523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 21222797 - 21222707
Alignment:
Q  272 aaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  21222797 aaaatactttgcaagattttgatgattttgatgattttaaaagactattaaggatttcaatggatttaattaataagattttaaaggattt 21222707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 31622260 - 31622376
Alignment:
Q  204 ttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttga-ggattttaaaagactttgcaggattttgatgactttga 302  Q
    |||| ||||||||||||| |||| |||||||||| | ||| ||| |||||||||| | ||| |||||||||||||||||| ||||||||||| |||||||    
T  31622260 tttttggagggtgtattg-attaggattttaaagaaaaatctttatttaaaaaagtcctgaaggattttaaaagactttgtaggattttgattactttga 31622358  T
Q  303 tgattttaaaagactatt 320  Q
    ||||||||||||||||||    
T  31622359 tgattttaaaagactatt 31622376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 45536647 - 45536545
Alignment:
Q  260 cttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatga 359  Q
    ||||| ||||||||||||   || | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||    
T  45536647 cttgatgattttaaaagatcatgtaagatttttatgactttgatgattttaaaatactattaaggatttcaatggatttaattcataagattttaaagga 45536548  T
Q  360 ttt 362  Q
    |||    
T  45536547 ttt 45536545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 33085441 - 33085522
Alignment:
Q  297 ctttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattttattgatttcaagaga 378  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||| |||||||| ||||||||||||    
T  33085441 ctttgatgattttaaaagactattaaggatttcaatagttttaattcataagattttaaaggattttatggatttcaagaga 33085522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 1923097 - 1923237
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| ||  |||||||| | |||||| || | ||||||||||||| | |||| |||||| |||||||| | ||||||||    
T  1923097 gggtgtattggattaggattttaaaagactatttttgtatgaaaaagtctagtggattttaaaagattatgcaagattttaatgacttttaggattttaa 1923196  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  1923197 aagattctcaaggatttcaagggatttatatcttaagattt 1923237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 29209542 - 29209444
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||| |||||| |||| ||| ||||||||||    
T  29209542 gggtgtattagattaggattttaaaggacaatttttgtttaaaaaa-tcttaaggattttaaaagactttgcatgattttaatgattttcatgattttaa 29209444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 32588243 - 32588316
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcag 285  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  32588243 agggtgtattggattaggatcttaaaagataatttttgtttaaaaaagtctt-aggattttaaaagactttgcag 32588316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 37014327 - 37014400
Alignment:
Q  218 attggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggatttt 291  Q
    ||||||||| |||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  37014327 attggattaggattttgaaggacaatttttgtttaaaaaagtcttaaggattttaaaagactttgcatgatttt 37014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 47784876 - 47784804
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgca 284  Q
    ||||||||||||  | |||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||    
T  47784876 gggtgtattggaccaggattttaaaggacaatttttgtttaaaaaagtcttatggattttaaaagactttgca 47784804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 33026219 - 33026061
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||     ||||| |||||||||   ||||||||||         ||||||||||    
T  33026219 aggaggctgtattggattaggattttaaaggacaatttttgtttaaaatttttttgagaattttaaaa-tttttgcaggat---------tttgatgatt 33026130  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattttattgatttcaaga 376  Q
    ||||||||||||  | |||||||||||||||| |||| || |||| ||| ||||| | |||||| ||||    
T  33026129 ttaaaagactatccacgatttcaatggatttaattcaaaaaattttaaaggatttaaatgattttaaga 33026061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 42658677 - 42658579
Alignment:
Q  217 tattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    |||||||||| ||||||||| || ||||||||  | |||||| || | ||||||||||||||| |||| |||||  |||||||| | ||||||||||||    
T  42658677 tattggattaggattttaaaagacaatttttgcatgaaaaagtctagtggattttaaaagactatgcaagatttcaatgacttttaagattttaaaaga 42658579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 29556644 - 29556579
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaa 273  Q
    |||| ||||||||| |||| |||||||||| | |||||||||||||||||| |||||| |||||||    
T  29556644 aggatggtgtattgaattaggattttaaagaacaatttttgtttaaaaaagtcttgagaattttaa 29556579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 9577161 - 9577201
Alignment:
Q  277 actttgcaggattttgatgactttgatgattttaaaagact 317  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  9577161 actttgcaggattttaatgactttcatgattttaaaagact 9577201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 26284410 - 26284304
Alignment:
Q  213 ggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaa 312  Q
    ||||||||| |||| | ||||||| || | ||||| |  ||||||  |||| | |||||| ||||||||||| |||||| || ||||| | |||||||||    
T  26284410 ggtgtattgaattaggtttttaaaagacattttttttaaaaaaaaatcttgtgcattttataagactttgcaagattttaattacttttaagattttaaa 26284311  T
Q  313 agactat 319  Q
    |||||||    
T  26284310 agactat 26284304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 27199119 - 27199065
Alignment:
Q  265 ggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactat 319  Q
    ||||||| ||||||| |||| |||||| |||||||| | ||||||||||||||||    
T  27199119 ggattttgaaagactatgcaagattttaatgacttttaagattttaaaagactat 27199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 348 - 378
Target Start/End: Original strand, 28824029 - 28824059
Alignment:
Q  348 gatttgaaatgattttattgatttcaagaga 378  Q
    |||||||||||||||||||||||||||||||    
T  28824029 gatttgaaatgattttattgatttcaagaga 28824059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 2e-62; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 201 - 362
Target Start/End: Original strand, 6196930 - 6197091
Alignment:
Q  201 tagttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgacttt 300  Q
    |||||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  6196930 tagtttaaggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagactttccaagattttgatgacttt 6197029  T
Q  301 gatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  6197030 gatgattttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 6197091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 207 - 362
Target Start/End: Original strand, 2300145 - 2300300
Alignment:
Q  207 taggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgat 306  Q
    |||| ||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2300145 taggggggtgtattggattaggattttaaaggacaatttttgtttaaaaaaatcttgaggattttaaaagactttgcaagattttgatgactttgatgat 2300244  T
Q  307 tttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  2300245 tttaaaatactattaaggatttcaatggatttaattcataagattttaaaggattt 2300300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 29077327 - 29077203
Alignment:
Q  238 gataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatt 337  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29077327 gataatttttgtttaaaaaagtgttgaggattttaaaaggctttgcaagattttgatgactttgatgattttaaaagattattaaggatttcaatggatt 29077228  T
Q  338 tatttcataagatttgaaatgattt 362  Q
    || |||||||||||| ||| |||||    
T  29077227 taattcataagattttaaaggattt 29077203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 29112299 - 29112175
Alignment:
Q  238 gataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatt 337  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29112299 gataatttttgtttaaaaaagtgttgaggattttaaaaggctttgcaagattttgatgactttgatgattttaaaagattattaaggatttcaatggatt 29112200  T
Q  338 tatttcataagatttgaaatgattt 362  Q
    || |||||||||||| ||| |||||    
T  29112199 taattcataagattttaaaggattt 29112175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 1392278 - 1392133
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    ||||||||||||||||||| ||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||| || ||         ||||||||||    
T  1392278 aggagggtgtattggattaggattttaaatgacgatttttgtttaaaaaagtcttgaggattttaaaagactttggagtat---------tttgatgatt 1392188  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||    
T  1392187 ttaaaagactattaaggatttcaatagatttaattcataagattttaaaggattt 1392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 3608128 - 3608041
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttg 292  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  3608128 tttaggagggtgtattgaattaggattttaaaggataatttttgtttaaaaaagtctttaggattttaaaagactttgcagaattttg 3608041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 7052469 - 7052367
Alignment:
Q  214 gtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaa 313  Q
    |||||||| |||| |||||||||||| |||||||||||||||||| ||| || |||||||||||||||||| |||||| ||||||||||||||||| |||    
T  7052469 gtgtattgaattaggattttaaaggacaatttttgtttaaaaaagtcttaagaattttaaaagactttgcatgattttaatgactttgatgattttgaaa 7052370  T
Q  314 gac 316  Q
    |||    
T  7052369 gac 7052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 23929408 - 23929297
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| || ||||||||| |||||||| | || | |||||||||||||||| | |||||| || ||||| | ||||||||    
T  23929408 gggtgtattggattaggattttaaaagacaatttttgtataaaaaagtcctgtgaattttaaaagactttgaaagattttaataacttttaagattttaa 23929309  T
Q  312 aagactattaag 323  Q
    ||||||||||||    
T  23929308 aagactattaag 23929297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 2239060 - 2238925
Alignment:
Q  208 aggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgatt 307  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||||| ||| || ||||||||||||||||                   ||||||    
T  2239060 aggatggtgtattggattacgattttaaaggacaacttttgtttaaaaaagtcttcagaattttaaaagactttg-------------------atgatt 2238980  T
Q  308 ttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||    
T  2238979 ttaaaagactattaaggatttcaatgaatttaattcataagattttaaaggattt 2238925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 10344927 - 10344984
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggatt 269  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  10344927 gggtgtattggattaggattttaaaggacaatttttgtttaaaaaagtcttgaggatt 10344984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 352
Target Start/End: Complemental strand, 30878883 - 30878743
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||| |||||  |||||||| ||  |||||||| | |||||| || | |||| |||||||| | |||| |||||| |||||||| | ||||||||    
T  30878883 gggtgtatttgattagaattttaaaagactatttttgtatgaaaaagtctagtggatattaaaagattatgcaagattttaatgacttttaggattttaa 30878784  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  30878783 aagattctcaaggatttcaagggatttatatcttaagattt 30878743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 5160943 - 5160995
Alignment:
Q  205 tttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaa 257  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  5160943 tttaggagggtgtattggattatgattttaaaggacaatttttatttaaaaaa 5160995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 29114904 - 29114867
Alignment:
Q  211 agggtgtattggattacgattttaaaggataatttttg 248  Q
    |||||||||||||||| |||||||||||||||||||||    
T  29114904 agggtgtattggattaggattttaaaggataatttttg 29114867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 25839888 - 25839837
Alignment:
Q  287 attttgatgactttgatgattttaaaagactattaaggatttcaatggattt 338  Q
    |||| |||||||||||||||||||| |||||||||| |  ||||||||||||    
T  25839888 atttggatgactttgatgattttaacagactattaacggattcaatggattt 25839837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 8634703 - 8634789
Alignment:
Q  229 attttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaaga 315  Q
    |||||||| || | ||||| | |||||||| |||| | |||||||||||||||| | |||||  |||||||| | ||||||||||||    
T  8634703 attttaaaagaaattttttctataaaaaagtcttgtgaattttaaaagactttgaaagatttgaatgacttttaagattttaaaaga 8634789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 24527 - 24683
Alignment:
Q  206 ttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatga 305  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  24527 ttaggagggtgtattggattagaattttaaaggacaatttttgtttaaaaaagtattgaggattttaaaagactttggaggattttgatgactttgatga 24626  T
Q  306 ttttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  24627 ttttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 24683  T

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Target: scaffold0151; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 37112 - 37200
Alignment:
Q  274 aagactttgcaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  37112 aagactttggaggattttgatgactttgatgattttaaaagactattaaggatttcaatggatttaattcataagattttaaaggattt 37200  T

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Target: scaffold0400 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 228 - 362
Target Start/End: Original strand, 14597 - 14731
Alignment:
Q  228 gattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatt 327  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14597 gattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaaagactattaaggatt 14696  T
Q  328 tcaatggatttatttcataagatttgaaatgattt 362  Q
    | |||||||||| |||||||||||| ||| |||||    
T  14697 taaatggatttaattcataagattttaaaggattt 14731  T

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Target: scaffold0365 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 228 - 362
Target Start/End: Original strand, 15240 - 15374
Alignment:
Q  228 gattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaaaagactattaaggatt 327  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15240 gattttaaaggacaatttttgtttaaaaaagtcttgaggattttaaaagattttgcaagattttgatgactttgatgattttaaaagactattaaggatt 15339  T
Q  328 tcaatggatttatttcataagatttgaaatgattt 362  Q
    | |||||||||| |||||||||||| ||| |||||    
T  15340 taaatggatttaattcataagattttaaaggattt 15374  T

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Target: scaffold0113 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 201 - 362
Target Start/End: Original strand, 37655 - 37807
Alignment:
Q  201 tagttttaggagggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgacttt 300  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||         ||||| |||    
T  37655 tagtcttaggagggtgtattggattagaattttaaaggataatttttgtttaaaaaagtcttgagaattttaaaagattttg---------gatgatttt 37745  T
Q  301 gatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||    
T  37746 gatgattttaaaagactattaagaatttcaatggatttaattcataagattttaaaggattt 37807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 10864 - 11004
Alignment:
Q  212 gggtgtattggattacgattttaaaggataatttttgtttaaaaaagccttgaggattttaaaagactttgcaggattttgatgactttgatgattttaa 311  Q
    ||||||||||||||| ||||||||| || ||||||| | | |||||| || | |||||| |||||| | |||| |||| | |||||||| | ||||||||    
T  10864 gggtgtattggattaggattttaaaagacaatttttatatgaaaaagtctagtggatttaaaaagattatgcaagattgtaatgacttttaggattttaa 10963  T
Q  312 aagactattaaggatttcaatggatttatttcataagattt 352  Q
    |||| | | ||||||||||| |||||||| || ||||||||    
T  10964 aagattctcaaggatttcaagggatttatatcttaagattt 11004  T

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Target: scaffold0276 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 298 - 362
Target Start/End: Original strand, 213 - 277
Alignment:
Q  298 tttgatgattttaaaagactattaaggatttcaatggatttatttcataagatttgaaatgattt 362  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||    
T  213 tttgatgattttaaaagactattaaggatttcaatggatttaatttataagattttaaaagattt 277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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