View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5814_low_54 (Length: 322)
Name: NF5814_low_54
Description: NF5814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5814_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 304
Target Start/End: Original strand, 32938073 - 32938361
Alignment:
| Q |
16 |
atgtgtaaatggtagtattccaaccaaacaacaaaatgtatgaacattacacatatcatttgaatgaccagtaagattgaaatcatgtgaagaaatgagt |
115 |
Q |
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| T |
32938073 |
atgtgtaaatggtagtattccaaccaaacaacaaaatgtatgaacattacatatatcatttgaatgactagtaagattgaaatcatgtgaagaaatgagt |
32938172 |
T |
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| Q |
116 |
gaactccttaatttgaagatgaaacacaagaactaatgcatgcatggcacatgtcttatcaaacttataaactatcttaaccaacttcaatctttccttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32938173 |
gaactccttaatttgaagatgaaacacaagaactaatgcatgcatggcacatgtcttatcaaacttataaactatcttaaccaacttcaatctttccttg |
32938272 |
T |
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| Q |
216 |
cacgttgtttcttaagtagttagttgaatgcaacattgccaattcttgaaattccaacccatggtgaccttttcaaacgtgacatgtct |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32938273 |
cacgttgtttcttaagtagttagttgaatgcaacattgccaattcttgaaattccaacccatggtgaccttttcaaacgtgacatgtct |
32938361 |
T |
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