View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5814_low_73 (Length: 251)
Name: NF5814_low_73
Description: NF5814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5814_low_73 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 42209840 - 42210073
Alignment:
| Q |
1 |
cacggggaacccacttgttggtgcttatgatgatgtgttcaccacacaaaccggatgtggagtgtcgacgaccttgaaaaatgtgacgggaataaagcat |
100 |
Q |
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| T |
42209840 |
cacggggaacccacttgttggtgcttatgatgatgtgttcaccacacaaaccggatgtggagtgtcgacgaccttgaaaaatgtgatgggaataaagcat |
42209939 |
T |
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| Q |
101 |
gatgtgcaaaccctagaacatgtattgtctaatcttcaaatgcatttctttgttttctttcgtctagagaaaatactttgacacatgtcattctaaatat |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42209940 |
gatgtgcaaaccctagaacatgtatggtctaatcttcaaatgcatttctttgttttctttcgtctagagaaaatactttgacacatgtcattctaaatat |
42210039 |
T |
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| Q |
201 |
ttaggtgtgtgaagggcttctgagcatataaaga |
234 |
Q |
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||||||||||||||||||||||||| |||||||| |
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| T |
42210040 |
ttaggtgtgtgaagggcttctgagcgtataaaga |
42210073 |
T |
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