View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5815-Insertion-3 (Length: 416)
Name: NF5815-Insertion-3
Description: NF5815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5815-Insertion-3 |
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Alignment Details
Target: chr7 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 9 - 409
Target Start/End: Original strand, 18677419 - 18677816
Alignment:
| Q |
9 |
aatatcattttcataatcccctcatcttctgcctcttcaatcttcacaccccccatccttcctcttcacaccccctctctcctctttcaatggcttccat |
108 |
Q |
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| T |
18677419 |
aatatcattttcataatcccctcatcttctgcctcttcaatcttcacaccccccctcattcctcttcacaccccctctctcctctttcaatggcttccat |
18677518 |
T |
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| Q |
109 |
tcccgttttctctccattcactcccatgaaacaaaagcataaacctctatctttccaacctctcttacgcacttgctcttccttttcccttcaaagagtc |
208 |
Q |
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| T |
18677519 |
tcccgttttctctccattcactcccatgaaacaaaagcataaacctctatctttccaacctctcttacgcactcgctcttccttttcccttcaaagggtc |
18677618 |
T |
|
| Q |
209 |
tcaaagggttgttcaatatcgagttttgcttgctcaacttcttctaagtttcatggtggaagagttgggtttaaccatagagaagggaaaacttcgtttc |
308 |
Q |
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| T |
18677619 |
tcaaagggttgttcaatatcaagttttgcttgctcaa---cttctaagcttcatggtggaagagttgggtttaaccatagagaagggaaaacttcgtttc |
18677715 |
T |
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| Q |
309 |
ttaaatttggtgttgatgaaagtgttgttggtggtggtggtaatggtgatgttggtgaaagagattggtctcagattttgtctgcactgcttccttttgt |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
18677716 |
ttaaatttggtgttgatgaaagtgttgttggtggtggtggtaatggtgatgttggtgaaagagattggtctcagattttgtctgcattgcttccttttgt |
18677815 |
T |
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