View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5820_high_1 (Length: 468)

Name: NF5820_high_1
Description: NF5820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5820_high_1
NF5820_high_1
[»] scaffold0119 (2 HSPs)
scaffold0119 (1-422)||(2440-2861)
scaffold0119 (1-422)||(14495-14916)
[»] chr6 (38 HSPs)
chr6 (1-422)||(26667932-26668353)
chr6 (328-453)||(29646253-29646379)
chr6 (328-422)||(31132943-31133037)
chr6 (328-422)||(4184326-4184420)
chr6 (328-453)||(15962772-15962898)
chr6 (330-453)||(8171915-8172038)
chr6 (328-422)||(11100447-11100541)
chr6 (328-422)||(27828378-27828472)
chr6 (328-453)||(1369934-1370059)
chr6 (328-422)||(9955862-9955956)
chr6 (328-422)||(20755422-20755516)
chr6 (328-453)||(10777978-10778104)
chr6 (328-453)||(16599104-16599230)
chr6 (328-453)||(5187805-5187930)
chr6 (328-407)||(33730556-33730634)
chr6 (328-397)||(14488333-14488401)
chr6 (341-406)||(18102735-18102800)
chr6 (343-395)||(26211371-26211423)
chr6 (328-407)||(4898526-4898604)
chr6 (329-385)||(10315306-10315363)
chr6 (328-407)||(9406617-9406695)
chr6 (327-407)||(4898207-4898287)
chr6 (358-407)||(30525434-30525483)
chr6 (328-407)||(25061689-25061767)
chr6 (347-390)||(32889636-32889679)
chr6 (341-397)||(3438083-3438139)
chr6 (328-407)||(11100091-11100170)
chr6 (347-407)||(15718261-15718321)
chr6 (328-391)||(21969990-21970052)
chr6 (341-407)||(18154591-18154657)
chr6 (252-290)||(27828395-27828433)
chr6 (342-380)||(30525393-30525431)
chr6 (327-380)||(4838309-4838361)
chr6 (343-380)||(4838397-4838434)
chr6 (343-380)||(11742438-11742475)
chr6 (343-380)||(25061770-25061807)
chr6 (327-407)||(11742356-11742435)
chr6 (400-453)||(15881961-15882014)
[»] chr2 (53 HSPs)
chr2 (1-297)||(1297752-1298048)
chr2 (328-453)||(39906315-39906441)
chr2 (331-453)||(44542887-44543009)
chr2 (328-451)||(20939758-20939881)
chr2 (328-453)||(39904689-39904815)
chr2 (328-449)||(6332326-6332447)
chr2 (328-422)||(22302055-22302149)
chr2 (328-421)||(33173534-33173627)
chr2 (328-453)||(2586416-2586541)
chr2 (328-453)||(4293250-4293375)
chr2 (328-453)||(9690204-9690329)
chr2 (328-453)||(30406507-30406632)
chr2 (327-422)||(44257492-44257587)
chr2 (328-453)||(38986994-38987120)
chr2 (328-453)||(7682051-7682175)
chr2 (328-414)||(324973-325059)
chr2 (328-453)||(9689421-9689547)
chr2 (328-453)||(15554068-15554193)
chr2 (328-453)||(22711079-22711204)
chr2 (328-391)||(3769489-3769552)
chr2 (328-407)||(13002060-13002138)
chr2 (343-398)||(17265358-17265413)
chr2 (341-407)||(33739625-33739691)
chr2 (324-386)||(1297691-1297750)
chr2 (381-453)||(3769653-3769725)
chr2 (328-407)||(34082645-34082723)
chr2 (327-392)||(29403982-29404046)
chr2 (328-407)||(11675230-11675309)
chr2 (327-395)||(16075080-16075147)
chr2 (341-397)||(18370320-18370376)
chr2 (347-407)||(23664827-23664887)
chr2 (328-397)||(37169644-37169712)
chr2 (328-392)||(1750227-1750290)
chr2 (360-407)||(16513140-16513187)
chr2 (343-421)||(33173575-33173653)
chr2 (343-421)||(33739585-33739663)
chr2 (328-407)||(42850094-42850172)
chr2 (328-407)||(29512113-29512193)
chr2 (362-407)||(8386777-8386822)
chr2 (356-397)||(44288808-44288849)
chr2 (356-407)||(768609-768660)
chr2 (328-371)||(8741623-8741666)
chr2 (328-371)||(23234087-23234130)
chr2 (328-407)||(23387165-23387243)
chr2 (343-390)||(24755157-24755203)
chr2 (252-290)||(6332370-6332408)
chr2 (252-290)||(15554116-15554154)
chr2 (252-290)||(33173573-33173611)
chr2 (367-408)||(1297756-1297797)
chr2 (362-421)||(6332347-6332406)
chr2 (362-421)||(38987035-38987094)
chr2 (328-407)||(41527933-41528012)
chr2 (329-370)||(43660694-43660737)
[»] chr8 (56 HSPs)
chr8 (328-453)||(9483684-9483809)
chr8 (328-453)||(1783037-1783162)
chr8 (327-453)||(19971467-19971593)
chr8 (327-453)||(21021220-21021346)
chr8 (328-453)||(21442163-21442288)
chr8 (328-453)||(14826328-14826453)
chr8 (328-453)||(31071589-31071713)
chr8 (328-419)||(30577938-30578029)
chr8 (336-410)||(21442395-21442469)
chr8 (328-413)||(41942932-41943016)
chr8 (328-407)||(5642557-5642633)
chr8 (328-407)||(5644498-5644574)
chr8 (328-381)||(42556441-42556494)
chr8 (343-407)||(8258373-8258437)
chr8 (327-407)||(10616372-10616451)
chr8 (328-407)||(32486964-32487042)
chr8 (341-407)||(1281933-1281999)
chr8 (341-407)||(32069103-32069169)
chr8 (328-385)||(25281053-25281110)
chr8 (328-391)||(13269271-13269333)
chr8 (328-407)||(13468338-13468416)
chr8 (328-407)||(27545841-27545919)
chr8 (328-398)||(26042978-26043047)
chr8 (341-407)||(36899820-36899886)
chr8 (328-407)||(29125747-29125825)
chr8 (328-407)||(30633102-30633180)
chr8 (328-407)||(35550629-35550707)
chr8 (341-407)||(23544841-23544907)
chr8 (328-398)||(25123468-25123537)
chr8 (361-407)||(30207248-30207294)
chr8 (341-407)||(39934450-39934516)
chr8 (343-397)||(45299639-45299693)
chr8 (347-407)||(1201750-1201810)
chr8 (347-407)||(21352288-21352348)
chr8 (327-407)||(34103081-34103160)
chr8 (328-407)||(2823639-2823717)
chr8 (328-407)||(3369793-3369870)
chr8 (328-407)||(18804870-18804948)
chr8 (341-407)||(26867972-26868038)
chr8 (328-365)||(2178743-2178780)
chr8 (343-380)||(26043059-26043096)
chr8 (343-388)||(45299698-45299743)
chr8 (341-421)||(9413875-9413955)
chr8 (328-392)||(13290592-13290655)
chr8 (328-407)||(5946824-5946901)
chr8 (401-453)||(14819342-14819394)
chr8 (328-391)||(25127968-25128030)
chr8 (252-290)||(23544867-23544905)
chr8 (358-388)||(44874200-44874230)
chr8 (343-380)||(184147-184184)
chr8 (343-380)||(1201710-1201747)
chr8 (343-380)||(10616332-10616369)
chr8 (343-380)||(17691256-17691293)
chr8 (343-380)||(26630070-26630107)
chr8 (328-393)||(42556757-42556821)
chr8 (327-407)||(9483956-9484035)
[»] chr4 (70 HSPs)
chr4 (328-453)||(10216286-10216411)
chr4 (328-453)||(13211873-13211998)
chr4 (327-453)||(5046675-5046801)
chr4 (328-453)||(12584320-12584446)
chr4 (327-453)||(17745205-17745329)
chr4 (328-453)||(5157056-5157181)
chr4 (328-453)||(13371269-13371394)
chr4 (328-453)||(13381470-13381595)
chr4 (328-453)||(41172468-41172593)
chr4 (328-453)||(48560056-48560181)
chr4 (328-422)||(13621380-13621474)
chr4 (327-453)||(17377550-17377677)
chr4 (328-421)||(3818802-3818895)
chr4 (328-453)||(14202904-14203030)
chr4 (327-453)||(30258161-30258287)
chr4 (328-421)||(42807978-42808071)
chr4 (328-453)||(50182233-50182356)
chr4 (328-453)||(49970653-49970777)
chr4 (328-422)||(6214041-6214135)
chr4 (328-422)||(7630115-7630209)
chr4 (328-422)||(10981367-10981461)
chr4 (328-453)||(13621156-13621281)
chr4 (328-412)||(18470315-18470399)
chr4 (328-410)||(578837-578919)
chr4 (328-422)||(17181008-17181102)
chr4 (328-422)||(21519789-21519883)
chr4 (328-453)||(51784003-51784130)
chr4 (328-453)||(34683082-34683208)
chr4 (343-453)||(26958610-26958720)
chr4 (328-453)||(30820523-30820649)
chr4 (331-397)||(45801868-45801934)
chr4 (328-421)||(52437505-52437597)
chr4 (328-407)||(6137592-6137670)
chr4 (341-407)||(9744225-9744291)
chr4 (327-407)||(15725218-15725297)
chr4 (327-407)||(20458926-20459005)
chr4 (343-407)||(49425853-49425917)
chr4 (328-407)||(4712697-4712775)
chr4 (328-407)||(6946685-6946763)
chr4 (328-407)||(16553465-16553543)
chr4 (328-407)||(26335781-26335859)
chr4 (328-407)||(40496236-40496314)
chr4 (341-398)||(6193058-6193115)
chr4 (328-396)||(46106714-46106781)
chr4 (328-407)||(11777589-11777667)
chr4 (356-407)||(23384016-23384067)
chr4 (328-407)||(38425745-38425823)
chr4 (341-400)||(49606071-49606130)
chr4 (357-407)||(14863040-14863090)
chr4 (328-421)||(33811085-33811177)
chr4 (328-397)||(36955397-36955465)
chr4 (343-407)||(45875813-45875877)
chr4 (341-397)||(54742500-54742556)
chr4 (358-421)||(43639068-43639131)
chr4 (328-421)||(6137538-6137630)
chr4 (341-407)||(33105964-33106030)
chr4 (362-407)||(142692-142737)
chr4 (328-384)||(43639017-43639072)
chr4 (328-422)||(47382219-47382302)
chr4 (356-407)||(52306835-52306886)
chr4 (252-290)||(5046723-5046761)
chr4 (341-391)||(29102037-29102087)
chr4 (335-369)||(30258289-30258323)
chr4 (252-290)||(43639077-43639115)
chr4 (343-380)||(6946766-6946803)
chr4 (343-380)||(14863093-14863130)
chr4 (343-380)||(26335862-26335899)
chr4 (362-421)||(3818843-3818902)
chr4 (362-421)||(5046700-5046759)
chr4 (343-379)||(49425813-49425849)
[»] chr3 (66 HSPs)
chr3 (328-449)||(7848560-7848681)
chr3 (328-453)||(6748686-6748811)
chr3 (328-453)||(26158268-26158394)
chr3 (328-453)||(11460183-11460308)
chr3 (328-453)||(37504574-37504699)
chr3 (328-453)||(6114814-6114940)
chr3 (328-453)||(994758-994883)
chr3 (328-422)||(21727678-21727772)
chr3 (328-421)||(51952234-51952328)
chr3 (328-453)||(6109200-6109326)
chr3 (328-453)||(12896670-12896796)
chr3 (328-421)||(47461727-47461820)
chr3 (328-453)||(8815365-8815489)
chr3 (328-422)||(38798011-38798105)
chr3 (328-453)||(995064-995190)
chr3 (328-453)||(7521391-7521517)
chr3 (327-453)||(17065758-17065884)
chr3 (328-421)||(45059601-45059694)
chr3 (328-410)||(4043661-4043743)
chr3 (328-422)||(3544321-3544416)
chr3 (328-414)||(26152273-26152359)
chr3 (328-421)||(2868232-2868325)
chr3 (328-421)||(27728224-27728317)
chr3 (328-394)||(17226270-17226336)
chr3 (328-422)||(51148080-51148173)
chr3 (367-452)||(52654387-52654472)
chr3 (328-379)||(27800497-27800548)
chr3 (328-407)||(50801602-50801680)
chr3 (328-407)||(50874200-50874278)
chr3 (328-395)||(53467449-53467515)
chr3 (341-407)||(8814818-8814884)
chr3 (328-396)||(13349163-13349230)
chr3 (341-397)||(32203193-32203249)
chr3 (374-453)||(26152546-26152626)
chr3 (328-407)||(27317667-27317745)
chr3 (328-407)||(31039643-31039721)
chr3 (343-384)||(34277589-34277630)
chr3 (328-407)||(1376084-1376162)
chr3 (344-407)||(12127584-12127647)
chr3 (328-407)||(53581587-53581665)
chr3 (341-407)||(17605513-17605579)
chr3 (347-421)||(27360064-27360137)
chr3 (341-407)||(33837896-33837962)
chr3 (346-407)||(50913086-50913147)
chr3 (389-453)||(3269269-3269333)
chr3 (341-392)||(27360036-27360087)
chr3 (252-290)||(37504613-37504651)
chr3 (343-380)||(3800306-3800343)
chr3 (328-361)||(21408611-21408644)
chr3 (328-399)||(3800224-3800295)
chr3 (369-421)||(51148081-51148132)
chr3 (246-290)||(52654381-52654425)
chr3 (362-398)||(53455663-53455699)
chr3 (327-378)||(26103730-26103780)
chr3 (362-397)||(29950609-29950644)
chr3 (362-397)||(29999763-29999798)
chr3 (341-396)||(36823995-36824050)
chr3 (252-290)||(6114853-6114891)
chr3 (252-290)||(7521430-7521468)
chr3 (356-421)||(27317707-27317772)
chr3 (328-390)||(48765316-48765377)
chr3 (343-380)||(12127650-12127687)
chr3 (343-380)||(29950657-29950694)
chr3 (343-380)||(29999811-29999848)
chr3 (358-398)||(3269427-3269467)
chr3 (362-421)||(51952276-51952335)
[»] chr7 (69 HSPs)
chr7 (328-453)||(38876200-38876326)
chr7 (328-453)||(12080738-12080863)
chr7 (328-453)||(14777966-14778091)
chr7 (328-453)||(15230104-15230229)
chr7 (328-453)||(32852896-32853021)
chr7 (328-452)||(14719028-14719152)
chr7 (328-422)||(45225432-45225526)
chr7 (328-453)||(20516959-20517085)
chr7 (328-453)||(27811981-27812106)
chr7 (328-453)||(28605481-28605605)
chr7 (328-422)||(48454609-48454703)
chr7 (328-421)||(11327635-11327728)
chr7 (328-453)||(18123114-18123240)
chr7 (328-453)||(43711951-43712077)
chr7 (328-413)||(45225299-45225384)
chr7 (328-453)||(24720300-24720425)
chr7 (328-422)||(4655084-4655178)
chr7 (328-422)||(48193192-48193286)
chr7 (328-421)||(34986564-34986657)
chr7 (328-422)||(7437863-7437957)
chr7 (338-453)||(14770124-14770239)
chr7 (338-453)||(15220575-15220690)
chr7 (328-422)||(22479245-22479339)
chr7 (328-422)||(26380140-26380234)
chr7 (328-414)||(8048041-8048127)
chr7 (335-421)||(37139001-37139087)
chr7 (328-386)||(33889121-33889179)
chr7 (328-381)||(1325335-1325388)
chr7 (328-407)||(25818523-25818601)
chr7 (361-453)||(32577615-32577707)
chr7 (328-398)||(27597059-27597129)
chr7 (328-376)||(18199607-18199655)
chr7 (328-407)||(18352395-18352473)
chr7 (328-407)||(41407381-41407459)
chr7 (341-407)||(454155-454221)
chr7 (328-407)||(938934-939012)
chr7 (328-407)||(2936679-2936757)
chr7 (344-407)||(9401735-9401798)
chr7 (328-407)||(28912121-28912199)
chr7 (328-398)||(38367944-38368013)
chr7 (328-397)||(11766160-11766228)
chr7 (343-407)||(27168292-27168356)
chr7 (328-398)||(2509409-2509477)
chr7 (379-453)||(33889847-33889921)
chr7 (327-407)||(38796903-38796982)
chr7 (360-407)||(2633972-2634019)
chr7 (328-390)||(32577544-32577607)
chr7 (341-407)||(19069447-19069513)
chr7 (360-421)||(2362819-2362880)
chr7 (362-407)||(6736589-6736634)
chr7 (328-377)||(18829710-18829759)
chr7 (252-289)||(37139018-37139055)
chr7 (343-421)||(14778007-14778086)
chr7 (343-421)||(15230145-15230224)
chr7 (328-407)||(23740077-23740156)
chr7 (328-380)||(27168359-27168410)
chr7 (328-398)||(15957301-15957371)
chr7 (370-421)||(18829775-18829826)
chr7 (328-407)||(41037397-41037475)
chr7 (328-390)||(7437746-7437808)
chr7 (252-290)||(14778005-14778043)
chr7 (252-290)||(15230143-15230181)
chr7 (252-290)||(32852935-32852973)
chr7 (342-380)||(38367894-38367932)
chr7 (252-290)||(48193231-48193269)
chr7 (252-290)||(48454626-48454664)
chr7 (328-397)||(6559396-6559464)
chr7 (362-421)||(12080779-12080838)
chr7 (400-453)||(27597144-27597197)
[»] chr5 (66 HSPs)
chr5 (328-453)||(30687949-30688075)
chr5 (328-453)||(1951468-1951593)
chr5 (328-452)||(17605067-17605191)
chr5 (328-453)||(15808997-15809123)
chr5 (328-453)||(33026254-33026379)
chr5 (328-453)||(33282282-33282407)
chr5 (328-453)||(3960673-3960798)
chr5 (329-453)||(29302139-29302264)
chr5 (328-453)||(37282208-37282330)
chr5 (328-453)||(4736821-4736943)
chr5 (328-422)||(11448759-11448853)
chr5 (328-453)||(26905924-26906046)
chr5 (327-453)||(17209911-17210034)
chr5 (328-413)||(27005155-27005240)
chr5 (328-414)||(1921486-1921572)
chr5 (328-453)||(30667616-30667738)
chr5 (328-453)||(33833088-33833214)
chr5 (328-387)||(14795718-14795777)
chr5 (365-453)||(38661242-38661330)
chr5 (351-453)||(37249351-37249454)
chr5 (328-387)||(1797439-1797498)
chr5 (327-390)||(7014551-7014614)
chr5 (328-407)||(25912123-25912201)
chr5 (328-395)||(30486136-30486203)
chr5 (328-407)||(31752139-31752217)
chr5 (328-407)||(39548921-39548999)
chr5 (328-398)||(17421717-17421786)
chr5 (328-397)||(31240335-31240403)
chr5 (343-407)||(17232997-17233061)
chr5 (328-407)||(4083761-4083839)
chr5 (328-407)||(7944311-7944389)
chr5 (328-407)||(14369790-14369868)
chr5 (357-407)||(33696104-33696154)
chr5 (358-407)||(12910103-12910152)
chr5 (327-407)||(28747784-28747863)
chr5 (328-407)||(3038910-3038988)
chr5 (377-453)||(17559259-17559335)
chr5 (341-407)||(6261072-6261138)
chr5 (341-407)||(6436458-6436524)
chr5 (327-400)||(9124724-9124797)
chr5 (383-453)||(1807474-1807543)
chr5 (328-393)||(4737955-4738019)
chr5 (341-407)||(2528802-2528869)
chr5 (341-407)||(13711113-13711180)
chr5 (343-421)||(17421757-17421835)
chr5 (328-397)||(4150985-4151055)
chr5 (341-407)||(10951090-10951156)
chr5 (357-407)||(17233353-17233403)
chr5 (328-397)||(22701835-22701902)
chr5 (347-391)||(22800738-22800782)
chr5 (347-407)||(39038560-39038620)
chr5 (328-407)||(2695177-2695254)
chr5 (329-384)||(13676229-13676283)
chr5 (343-421)||(26905963-26906041)
chr5 (348-391)||(38952230-38952273)
chr5 (360-407)||(40234169-40234216)
chr5 (252-290)||(27005163-27005201)
chr5 (361-421)||(2528831-2528891)
chr5 (343-380)||(2695137-2695174)
chr5 (326-391)||(10471015-10471079)
chr5 (343-380)||(14369871-14369908)
chr5 (343-380)||(25912083-25912120)
chr5 (343-380)||(32736364-32736401)
chr5 (328-408)||(8410698-8410777)
chr5 (343-421)||(28747825-28747904)
chr5 (328-407)||(33832739-33832818)
[»] chr1 (62 HSPs)
chr1 (328-453)||(39424301-39424426)
chr1 (328-453)||(16960315-16960440)
chr1 (328-453)||(32716433-32716558)
chr1 (328-453)||(20411229-20411355)
chr1 (328-422)||(12864319-12864413)
chr1 (328-414)||(14387472-14387558)
chr1 (328-422)||(14494433-14494527)
chr1 (328-453)||(27389514-27389642)
chr1 (328-422)||(52772310-52772404)
chr1 (328-453)||(36817682-36817808)
chr1 (328-453)||(47130941-47131067)
chr1 (328-449)||(1805015-1805136)
chr1 (328-421)||(13385761-13385854)
chr1 (328-422)||(27255716-27255810)
chr1 (327-452)||(51465048-51465172)
chr1 (328-410)||(43236238-43236320)
chr1 (328-397)||(13943351-13943420)
chr1 (328-422)||(32374566-32374660)
chr1 (343-453)||(20201739-20201850)
chr1 (328-421)||(26843063-26843155)
chr1 (328-407)||(463392-463470)
chr1 (328-407)||(16005602-16005680)
chr1 (341-407)||(28454755-28454821)
chr1 (328-397)||(10764635-10764704)
chr1 (328-397)||(13264569-13264637)
chr1 (341-392)||(32156033-32156084)
chr1 (328-407)||(34515210-34515288)
chr1 (328-407)||(36389538-36389616)
chr1 (343-398)||(51431898-51431953)
chr1 (328-398)||(13157648-13157717)
chr1 (328-394)||(42199891-42199956)
chr1 (328-394)||(42208759-42208824)
chr1 (328-421)||(5491667-5491759)
chr1 (328-421)||(6192491-6192583)
chr1 (327-392)||(27348221-27348285)
chr1 (328-397)||(27787890-27787958)
chr1 (343-407)||(32151945-32152009)
chr1 (341-407)||(8643046-8643112)
chr1 (328-398)||(24770718-24770787)
chr1 (328-377)||(28094458-28094507)
chr1 (327-407)||(3273369-3273448)
chr1 (327-400)||(24190766-24190840)
chr1 (328-407)||(158494-158572)
chr1 (356-407)||(3979457-3979508)
chr1 (328-407)||(50559329-50559407)
chr1 (343-397)||(32144081-32144135)
chr1 (358-407)||(13157362-13157411)
chr1 (362-414)||(32151997-32152049)
chr1 (328-396)||(41146288-41146355)
chr1 (357-397)||(45818847-45818887)
chr1 (328-407)||(16073519-16073597)
chr1 (360-407)||(32144130-32144177)
chr1 (327-421)||(4158173-4158266)
chr1 (343-421)||(13157596-13157677)
chr1 (252-290)||(20201763-20201801)
chr1 (328-407)||(34306519-34306601)
chr1 (343-380)||(24770669-24770706)
chr1 (253-290)||(32374606-32374643)
chr1 (343-380)||(36389498-36389535)
chr1 (361-398)||(47130797-47130834)
chr1 (390-422)||(28094506-28094538)
chr1 (362-421)||(47130983-47131042)
[»] scaffold0068 (1 HSPs)
scaffold0068 (327-453)||(57931-58058)
[»] scaffold0002 (1 HSPs)
scaffold0002 (328-453)||(452401-452526)
[»] scaffold0074 (1 HSPs)
scaffold0074 (328-453)||(26086-26212)
[»] scaffold0015 (1 HSPs)
scaffold0015 (328-407)||(9813-9891)
[»] scaffold0418 (2 HSPs)
scaffold0418 (328-407)||(5721-5799)
scaffold0418 (343-421)||(5761-5839)
[»] scaffold0217 (1 HSPs)
scaffold0217 (328-407)||(20700-20778)
[»] scaffold0325 (1 HSPs)
scaffold0325 (328-407)||(6577-6655)
[»] scaffold0627 (1 HSPs)
scaffold0627 (328-421)||(4098-4189)
[»] scaffold0193 (1 HSPs)
scaffold0193 (328-389)||(22714-22775)
[»] scaffold1808 (1 HSPs)
scaffold1808 (342-407)||(615-680)


Alignment Details
Target: scaffold0119 (Bit Score: 253; Significance: 1e-140; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 2440 - 2861
Alignment:
Q  1 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttnnnnnnnnnnnnnnnnnnnnttaatggctt-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||| ||    
T  2440 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttaaaaaagaaaatgttaaaaattaatggctttat 2539  T
Q  100 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccatcacggaataaaatatatttccacctctcctattattagtctctctcnnnnn 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||         
T  2540 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccaccaccgaataaaatatatttccacctctcctattattagtctctctcttttt 2639  T
Q  200 nncttaaattgtt-ctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgtctataggatttgcaagtctcn 298  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  2640 ttcttaaattgttcctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgcctataggatttgcaagtctc- 2738  T
Q  299 nnnnnnnnnncttcttaaattgttcctcttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
              ||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2739 -tctttttttcttcttaaattatttctcttttttagttatacacttactaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatag 2837  T
Q  399 aatttgctagaacacatccacttg 422  Q
    |||||||||||||||| |||||||    
T  2838 aatttgctagaacacacccacttg 2861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 14495 - 14916
Alignment:
Q  1 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttnnnnnnnnnnnnnnnnnnnnttaatggctt-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||| ||    
T  14495 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttaaaaaagaaaatgttaaaaattaatggctttat 14594  T
Q  100 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccatcacggaataaaatatatttccacctctcctattattagtctctctcnnnnn 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||         
T  14595 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccaccaccgaataaaatatatttccacctctcctattattagtctctctcttttt 14694  T
Q  200 nncttaaattgtt-ctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgtctataggatttgcaagtctcn 298  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  14695 ttcttaaattgttcctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgcctataggatttgcaagtctc- 14793  T
Q  299 nnnnnnnnnncttcttaaattgttcctcttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
              ||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14794 -tctttttttcttcttaaattatttctcttttttagttatacacttactaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatag 14892  T
Q  399 aatttgctagaacacatccacttg 422  Q
    |||||||||||||||| |||||||    
T  14893 aatttgctagaacacacccacttg 14916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 253; Significance: 1e-140; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 26668353 - 26667932
Alignment:
Q  1 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttnnnnnnnnnnnnnnnnnnnnttaatggctt-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||| ||    
T  26668353 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttaaaaaagaaaatgttaaaaattaatggctttat 26668254  T
Q  100 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccatcacggaataaaatatatttccacctctcctattattagtctctctcnnnnn 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||         
T  26668253 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccaccaccgaataaaatatatttccacctctcctattattagtctctctcttttt 26668154  T
Q  200 nncttaaattgtt-ctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgtctataggatttgcaagtctcn 298  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  26668153 ttcttaaattgttcctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgcctataggatttgcaagtctc- 26668055  T
Q  299 nnnnnnnnnncttcttaaattgttcctcttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
              ||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26668054 -tctttttttcttcttaaattatttctcttttttagttatacacttactaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatag 26667956  T
Q  399 aatttgctagaacacatccacttg 422  Q
    |||||||||||||||| |||||||    
T  26667955 aatttgctagaacacacccacttg 26667932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 29646253 - 29646379
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  29646253 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 29646352  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  29646353 tctagaaggtgtgttatagcaacatac 29646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 31133037 - 31132943
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  31133037 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttg 31132943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 4184420 - 4184326
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  4184420 tttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgctagaacacacccacttg 4184326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 15962898 - 15962772
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||         
T  15962898 tttttagttatacacttgctaaaatactcattctaaaaaataagtgggtgtattctagaaaatgcctatagaatttgctagaacacacccacttgctttt 15962799  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  15962798 tttagaaggtgtgttatagcaacatac 15962772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 8171915 - 8172038
Alignment:
Q  330 tttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnn 429  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||           
T  8171915 tttagttatttatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacacccacttgttttttt 8172014  T
Q  430 agaaggtgtgttatagcaacatac 453  Q
    |||| |||||||||||||||||||    
T  8172015 agaaagtgtgttatagcaacatac 8172038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 11100541 - 11100447
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  11100541 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttg 11100447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 27828472 - 27828378
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  27828472 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctaacaaatgcctataggatttgctagaacacacccacttg 27828378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 1370059 - 1369934
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||||| ||||||||| |||||||         
T  1370059 tttttagttattcacttgctaaaatactccttctaaaaaataaatggatgtattctagcaaatgtctataggatttgttagaacacacccacttgttttt 1369960  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||||||||||||| |||||||||    
T  1369959 ttagaaggtgtgttatcgcaacatac 1369934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 9955956 - 9955862
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  9955956 tttttagttattcatttgttaaaatactctttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttg 9955862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 20755516 - 20755422
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||| ||||||    
T  20755516 tttttagttattcacttgctaaaatactccttctaaaaaataagtgcgtgtattctagcaaacgtctataggatttgctagaacacattcacttg 20755422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 10778104 - 10777978
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||| ||||| ||||||||| |||||||         
T  10778104 tttttagttattcacttgctaaaatactccttctaaaaaccaagtgggtgtatcctagcaaatgtctataggatttgttagaacacacccacttgttttt 10778005  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  10778004 gttagaaggtgtgttatagcaacatac 10777978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 16599230 - 16599104
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||| |||||| | |||||         
T  16599230 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagtaaatgcctataggattcactaaaacacaccaacttgttttt 16599131  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  16599130 tttagaaggtgtgttatagcaacatac 16599104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 5187930 - 5187805
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||          
T  5187930 tttttagttattcatttgttaaaatactcaatctaaaaaataagtgggtgtattctagcaaatgcctgtaggttttgctagaacacacccacttattttt 5187831  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      | ||||||||||||||||||||||    
T  5187830 ttaaaaggtgtgttatagcaacatac 5187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 33730556 - 33730634
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33730556 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 33730634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 14488333 - 14488401
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  14488333 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctata 14488401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 18102735 - 18102800
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgct 406  Q
    |||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  18102735 acttgctaaaatacacattctaaaaaataagtgggtgtatcatagcaaatgcctatagaagttgct 18102800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 26211423 - 26211371
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgccta 395  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  26211423 ttgctaaaatacttcttctaaaaaataagtaggtgtattctagcaaatgccta 26211371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 4898604 - 4898526
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  4898604 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 4898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 10315363 - 10315306
Alignment:
Q  329 ttttagttatt-cacttgctaaaatactccttctaaaaaataagtgggtgtattctag 385  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  10315363 ttttagttatttcatttgctaaaatactccttctaaaaaataagtgagtgtattctag 10315306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 9406617 - 9406695
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| |||||||||| ||| |||| || |||| ||||||||||||||||||||||||||| ||||| | ||||||    
T  9406617 tttttagtt-ttcacttgctgaaacactcattgtaaacaataagtgggtgtattctagcaaatgcatataggaattgcta 9406695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 4898287 - 4898207
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttc-taaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||||||||| || ||||  ||||||||||||| |||||||||||||||||||||||| | ||||||    
T  4898287 ttttttagttata-acttgctaaaacacaccttaataaaaaataagtgagtgtattctagcaaatgcctataggagttgcta 4898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 30525483 - 30525434
Alignment:
Q  358 ttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  30525483 ttctaaaaaataagtgagtgtattctagcaaatgcctataggagttgcta 30525434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 25061689 - 25061767
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||| ||||| || |||||||| |||||||| ||||||| ||||||||||||||||| | ||||||    
T  25061689 tttttagttata-acttgttaaaacacaccttctaacaaataagttggtgtatcctagcaaatgcctataggagttgcta 25061767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 390
Target Start/End: Complemental strand, 32889679 - 32889636
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaat 390  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||    
T  32889679 taaaatacttcttttaaaaaataagtgggtgtattctagcaaat 32889636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 3438139 - 3438083
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||| || | ||||||||||||||||||| ||| || |||||||||||||    
T  3438139 acttgctaaaacacacattctaaaaaataagtgggtatatccttgcaaatgcctata 3438083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 11100091 - 11100170
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | |||||||| |||||||||||| |||||||||||||| ||||| | ||||||    
T  11100091 tttttagttata-acttgctaaaacacacattctaaaaaaataagtgggtgcattctagcaaatgcatataggagttgcta 11100170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 15718261 - 15718321
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||| || |||||||||| |||||||| ||||||||| ||||||||||||| | ||||||    
T  15718261 taaaacacaccttctaaaatataagtggatgtattctaacaaatgcctataggagttgcta 15718321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 21970052 - 21969990
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    |||||||||||  ||||| |||||||| |||| |||||||||||| | ||||||||||||||||    
T  21970052 tttttagttata-acttgttaaaatacaccttataaaaaataagtagatgtattctagcaaatg 21969990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 18154591 - 18154657
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || || |||| ||||||||||||||||| ||| |||||| |||||| | ||||||    
T  18154591 acttgctaaaacacaccgtctataaaataagtgggtgtatcctaacaaatgtctataggagttgcta 18154657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 27828433 - 27828395
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  27828433 ataagtgggtgtattctaacaaatgcctataggatttgc 27828395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 380
Target Start/End: Original strand, 30525393 - 30525431
Alignment:
Q  342 cttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  30525393 cttgctaaaatacaccttctaaaatataagtgggtgtat 30525431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 4838309 - 4838361
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||||||  ||||||||||| || | |||||||||||||||||||||||    
T  4838309 ttttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtat 4838361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 4838434 - 4838397
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  4838434 ttgctaaaacacaccttctaaaaaataagtgggtgtat 4838397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 11742475 - 11742438
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  11742475 ttgctaaaacacaccttctaaaaaataagtgggtgtat 11742438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 25061807 - 25061770
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  25061807 ttgctaaaacacaccttctaaaaaataagtgggtgtat 25061770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 11742356 - 11742435
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  || |||||||| || ||||  ||||| ||| ||||||||| ||||||||||||||||| | ||||||    
T  11742356 ttttttagttata-acctgctaaaacacacctttaaaaaattaaatgggtgtatcctagcaaatgcctataggagttgcta 11742435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 453
Target Start/End: Complemental strand, 15882014 - 15881961
Alignment:
Q  400 atttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  15882014 atttgctagaacacacccacttgtttttctagaaggtgtgttatagcaacatac 15881961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 3e-86; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 1298048 - 1297752
Alignment:
Q  1 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttnnnnnnnnnnnnnnnnnnnnttaatggctt-at 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||| ||    
T  1298048 agatattgagcagtttatactttatacgcactaacctacctagcttaaaagttagcattgttgctttaaaaaagaaaatgttaaaaattaatggctttat 1297949  T
Q  100 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccatcacggaataaaatatatttccacctctcctattattagtctctctcnnnnn 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||||||||||          
T  1297948 tgtgagctcactaaagaacactaaagaagaatataggttccttgtccaccaccggatagaatatatttccacctctcctattattagtctctct--tttt 1297851  T
Q  200 nncttaaattgtt-ctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattttaacaaatgtctataggatttgcaagtctc 297  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||    
T  1297850 ttcttaaattgttcctcttaattattaaatgtgatgtattaatgttaatatatataagtgggtgtattcttacaaatgtctatagaatttgctagtctc 1297752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 39906441 - 39906315
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  39906441 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 39906342  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  39906341 tctagaaggtgtgttatagcaacatac 39906315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 44542887 - 44543009
Alignment:
Q  331 ttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnna 430  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||       |    
T  44542887 ttagttatttacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttttta 44542986  T
Q  431 gaaggtgtgttatagcaacatac 453  Q
    |||||||||||||||||||||||    
T  44542987 gaaggtgtgttatagcaacatac 44543009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 328 - 451
Target Start/End: Complemental strand, 20939881 - 20939758
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  20939881 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgtttat 20939782  T
Q  428 nnagaaggtgtgttatagcaacat 451  Q
      |||| |||||||||||||||||    
T  20939781 ttagaaagtgtgttatagcaacat 20939758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 39904689 - 39904815
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  39904689 tttttaattattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 39904788  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  39904789 tctagaaggtgtgttatagcaacatac 39904815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 6332447 - 6332326
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||         
T  6332447 tttttagttattcatttgctaaaatactccttttaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccacttgttttt 6332348  T
Q  428 nnagaaggtgtgttatagcaac 449  Q
      ||||||||||||||||||||    
T  6332347 ttagaaggtgtgttatagcaac 6332326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 22302149 - 22302055
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  22302149 tttttagttattcacttgctaaaatactcattctaaacaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttg 22302055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 33173534 - 33173627
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  33173534 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccactt 33173627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 2586416 - 2586541
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||          
T  2586416 ttttttgttattcatttgctaaaatactccttctaaaaaataagtaggtgtattctagcaaatgcctataggatttgctagaacacaccaacttattttt 2586515  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  2586516 ttagaaggtgtgttatagcaacatac 2586541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 4293375 - 4293250
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||         
T  4293375 tttttagttattgatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatacctatataatttgctataacacacccacttgttttt 4293276  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||| |||||||||||||||||||    
T  4293275 ttagaatgtgtgttatagcaacatac 4293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 9690329 - 9690204
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||         
T  9690329 tttttagttattgatttgttaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacactcacttgttttt 9690230  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  9690229 taagaaggtgtgttatagcaacatac 9690204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 30406632 - 30406507
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||         
T  30406632 tttttagttattgatttgctaaaatactccatctaaaaaataagtgggtgtattgtagcaagtgcctataggatttgctagaacacacccacttgttttt 30406533  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  30406532 taagaaggtgtgttatagcaacatac 30406507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 327 - 422
Target Start/End: Original strand, 44257492 - 44257587
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||    
T  44257492 ttttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataagatttgttagaacacacccacttg 44257587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 38986994 - 38987120
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||         
T  38986994 tttttagttattcacttgttaaaatactccttctaaaatgtaagtggatgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 38987093  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  38987094 tgtagaaggtgtgttatagcaacatac 38987120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 7682175 - 7682051
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||| ||||||          
T  7682175 tttttagttattcacttgctaaaatactccttctaaaaaa-aagtgggtgtattctagcaaatgcctataggatttgctaaaatacacccacttcttttt 7682077  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||| |||||||||||||||||||    
T  7682076 ttagaaagtgtgttatagcaacatac 7682051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 325059 - 324973
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacaca 414  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  325059 tttttagttattcatttgttaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataaaatttgctagaacaca 324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 9689547 - 9689421
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| |||  ||||||         
T  9689547 tttttagtaattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaatacactcacttgttttt 9689448  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  9689447 gttagaaggtgtgttatagcaacatac 9689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 15554193 - 15554068
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||| ||| |||         
T  15554193 tttttagttattcatttgctaaaatactcattctaaaaaataagtgggtgtattctaacaaatgtcaataggatttgctagaacacacccatttgttttt 15554094  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||| ||||||||||| |||||||    
T  15554093 ttagaatgtgtgttataggaacatac 15554068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 22711204 - 22711079
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||| ||| ||          
T  22711204 tttttagttatttatttactaaaatactccttctaaaaaataagtggatgtattctagcaaatgcctataggatttgttataacacacccatttattttt 22711105  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||| ||||||||||    
T  22711104 ttagaaggtgtgttacagcaacatac 22711079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 3769489 - 3769552
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3769489 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtgttctagcaaatg 3769552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 13002060 - 13002138
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| | ||||||    
T  13002060 tttttagttat-cacttgctaaaacactccttctaaaaaataagagggtgtattttagcaaatgcctataggagttgcta 13002138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 17265413 - 17265358
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17265413 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctatag 17265358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 33739691 - 33739625
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  33739691 acttgctaaaacacaccttctaaaaaataagtggatgtattctagcaaatgcctataggagttgcta 33739625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 1297750 - 1297691
Alignment:
Q  324 ctcttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagc 386  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  1297750 ctcttttttagttattcacttgctaaaatactc---ctaaaaaataagtggttgtattctagc 1297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 3769653 - 3769725
Alignment:
Q  381 tctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    |||||||||||||||||| ||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  3769653 tctagcaaatgcctataggatttgctagaacacacccacttgtttttttagaaggtgtgttatagcaacatac 3769725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 34082723 - 34082645
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||| | ||||||    
T  34082723 tttttagttata-acttgctaaaacacaccttctaaaaaataaatgggtgtatcctagcaaatgcctataggagttgcta 34082645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 29403982 - 29404046
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgc 392  Q
    |||||||||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  29403982 ttttttagttat-catttgctaaaacactcattctaaaaaataagtgggtgtattttagcaaatgc 29404046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 11675309 - 11675230
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaa-taagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||| | ||||||    
T  11675309 tttttagttata-acttgctaaaacacaccttctaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 11675230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 16075080 - 16075147
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgccta 395  Q
    ||||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||| |||||||||    
T  16075080 ttttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagtaaatgccta 16075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 18370376 - 18370320
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||| || ||||||||||||||||||||||||| |||||||||| |||||    
T  18370376 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgactata 18370320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 23664887 - 23664827
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  23664887 taaaacacaccttctaaaatataagtgggtgtattctagcaaatgcctataggagttgcta 23664827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 37169712 - 37169644
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  |||||||||||  | |||| ||||||||||| |||||||||||||||||||||||||    
T  37169712 tttttagttata-acttgctaaaacgcaccttttaaaaaataagagggtgtattctagcaaatgcctata 37169644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 1750227 - 1750290
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgc 392  Q
    |||||||||||  |||| |||||| || ||||||||||| |||||||||||||||||||||||||    
T  1750227 tttttagttata-acttactaaaacacaccttctaaaaattaagtgggtgtattctagcaaatgc 1750290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 407
Target Start/End: Original strand, 16513140 - 16513187
Alignment:
Q  360 ctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16513140 ctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 16513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 33173653 - 33173575
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    |||||| || || ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||    
T  33173653 ttgctataacacaccttccaaaaaataagtgggtgtgttctagcaaat-cctatagacatttgctagaatacacccactt 33173575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 33739585 - 33739663
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    ||||||||| || |||||||||||||||||||||||||  |||||| | |||||| | ||||||||||| ||||||||||    
T  33739585 ttgctaaaacacaccttctaaaaaataagtgggtgtatgttagcaact-cctataggcatttgctagaatacatccactt 33739663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 42850172 - 42850094
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||| ||||| || | || |||||||||||||| ||||||||||||||||||||||| | ||||||    
T  42850172 tttttagttata-acttgttaaaacacactttttaaaaaataagtggatgtattctagcaaatgcctataggaattgcta 42850094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 29512113 - 29512193
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa--aataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||  ||||||||||||||| |||| ||||| |||||||| ||||||    
T  29512113 tttttagttata-acttgctaaaacacaccttctaaaaaaaataagtgggtgtatcctagtaaatgtctatagaagttgcta 29512193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 407
Target Start/End: Complemental strand, 8386822 - 8386777
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||    
T  8386822 aaaaaataagtgggtgtattctagcaaatgcatataggagttgcta 8386777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 44288808 - 44288849
Alignment:
Q  356 ccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  44288808 ccttctaaaaaataagtgggagtattttagcaaatgcctata 44288849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 407
Target Start/End: Original strand, 768609 - 768660
Alignment:
Q  356 ccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||| |||||||  |||||||||||||||| | ||||||    
T  768609 ccttctaaaaaataagttggtgtatcgtagcaaatgcctataggagttgcta 768660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 8741666 - 8741623
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataag 371  Q
    |||||||||||||||||||||||||||||||  |||||| ||||    
T  8741666 tttttagttattcacttgctaaaatactcctcttaaaaattaag 8741623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 23234087 - 23234130
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataag 371  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||    
T  23234087 tttttagttattcatttgctaaagtaccccttctaaaaaataag 23234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 23387165 - 23387243
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||| ||| |||| ||||||||||||||||| ||||||| ||| |||||| |||||| | ||||||    
T  23387165 tttttagttata-acttgttaagatacaccttctaaaaaataagtaggtgtatcctaacaaatgtctataggagttgcta 23387243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 24755157 - 24755203
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaat 390  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  24755157 ttgctaaaatactctttctaaaa-ataagtgggtgtattttagcaaat 24755203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 6332408 - 6332370
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  6332408 ataagtgggtgtattctagcaaatgtctataggatttgc 6332370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 15554154 - 15554116
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  15554154 ataagtgggtgtattctaacaaatgtcaataggatttgc 15554116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 33173573 - 33173611
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  33173573 ataagtgggtgtattctagcaaatgtctataggatttgc 33173611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 408
Target Start/End: Complemental strand, 1297797 - 1297756
Alignment:
Q  367 ataagtgggtgtattctagcaaatgcctatagaatttgctag 408  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  1297797 ataagtgggtgtattcttacaaatgtctatagaatttgctag 1297756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 6332347 - 6332406
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    |||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||    
T  6332347 aaaaaacaagtgggtgtgttctagcaaat-cctatagacatttgctagaatacacccactt 6332406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 38987094 - 38987035
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    |||||| |||||||||| ||||||||||| |||||| | ||||||||||| ||||||||||    
T  38987094 aaaaaacaagtgggtgtgttctagcaaat-cctataggcatttgctagaatacatccactt 38987035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 41527933 - 41528012
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaa-taagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||| ||||| || | |||||||||| |||||||||||||| ||||||||| ||||| || ||||||    
T  41527933 tttttagttata-acttgttaaaacacacattctaaaaaagtaagtgggtgtattatagcaaatgtctatataagttgcta 41528012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 43660694 - 43660737
Alignment:
Q  329 ttttagttat--tcacttgctaaaatactccttctaaaaaataa 370  Q
    ||||||||||  |||| |||||||||||||||||||||||||||    
T  43660694 ttttagttatcatcacatgctaaaatactccttctaaaaaataa 43660737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 9483809 - 9483684
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  9483809 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 9483710  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  9483709 ttagaaggtgtgttatagcaacatac 9483684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 1783162 - 1783037
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  1783162 tttttagttattcacttgctaaaacactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 1783063  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  1783062 ttagaaggtgtgttatagcaacatac 1783037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 19971467 - 19971593
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||         
T  19971467 ttttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgttagaacacacccacttatttt 19971566  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       |||||||||||||||| |||||||    
T  19971567 tttagaaggtgtgttatagtaacatac 19971593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 21021346 - 21021220
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||         
T  21021346 ttttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgttagaacacacccacttatttt 21021247  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       |||||||||||||||| |||||||    
T  21021246 tttagaaggtgtgttatagtaacatac 21021220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 21442288 - 21442163
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  21442288 tttttagttattcacttgctaaaatactccttctaaaaaacaagt-ggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 21442190  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  21442189 tttagaaggtgtgttatagcaacatac 21442163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 14826328 - 14826453
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||||         
T  14826328 tttttagttattcacttgcaaaaatattcattctaaaaaataagtgggtgtattctagcaaatgcttataggatttgctagaacacacctacttgttttt 14826427  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  14826428 ttagaaggtgtgttatagcaacatac 14826453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 31071713 - 31071589
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  31071713 tttttagttattgatttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgctagaacacacccacttg-tttt 31071615  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||| ||||||    
T  31071614 ttagaaggtgtgttatagcgacatac 31071589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 30578029 - 30577938
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccac 419  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  30578029 tttttagttattcacctgctaaaatactcattctaaaaaataagcgggtgtatcctagcaaatgcctatagaatttgctagaacacacccac 30577938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 21442395 - 21442469
Alignment:
Q  336 tattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaa 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21442395 tattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaa 21442469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 41943016 - 41942932
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacac 413  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  41943016 tttttagttattcacttgctaaaatactcctcctaaaaaataagtgggtgtattctagc-aatgcctataggatttgctagaacac 41942932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 5642557 - 5642633
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||| |||||||||||||||||||||||| | ||||||   |||||||||||||||||||||||||||| ||||||||    
T  5642557 tttttaattattcacttgctaaaatactcctacaaaaaaa---gtgggtgtattctagcaaatgcctataggatttgcta 5642633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 5644498 - 5644574
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||| |||||||||||||||||||||||| | ||||||   |||||||||||||||||||||||||||| ||||||||    
T  5644498 tttttaattattcacttgctaaaatactcctacaaaaaaa---gtgggtgtattctagcaaatgcctataggatttgcta 5644574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 42556494 - 42556441
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtatt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42556494 tttttagttattcacttgctaaaatactccttctaaaaaataagtaggtgtatt 42556441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 8258373 - 8258437
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8258373 ttgctaaaacacttcttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 8258437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 10616451 - 10616372
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  10616451 ttttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 10616372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 32486964 - 32487042
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  32486964 tttttagttata-acttgctaaaatacactttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 32487042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 1281933 - 1281999
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  1281933 acttgctaaaacacaccttctaaaaaataagtggatgtattctaccaaatgcctatagaagttgcta 1281999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 32069169 - 32069103
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  32069169 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 32069103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 25281110 - 25281053
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctag 385  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  25281110 tttttagttatttatttgctaaaatactcattctaaaaaataagtgggtgtattctag 25281053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 13269271 - 13269333
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13269271 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatg 13269333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 13468338 - 13468416
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||  || |||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  13468338 tttttagttata-acttgctaaagcacaccttctaaaaaataagtgggtgtattatagcaaatgcctataggagttgcta 13468416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 27545919 - 27545841
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  27545919 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgcta 27545841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 398
Target Start/End: Original strand, 26042978 - 26043047
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||||||||| |||||||||||||||||    
T  26042978 tttttagttata-acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctatag 26043047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 36899886 - 36899820
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  36899886 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcgtataggagttgcta 36899820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 29125747 - 29125825
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||| |||||||| |||||||||| ||||||||||||||||| | ||||||    
T  29125747 tttttagttata-acttgctaaaacacaccttccaaaaaataggtgggtgtatcctagcaaatgcctataggagttgcta 29125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 30633102 - 30633180
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||| ||| ||||||||||||||||||||| | ||||| ||||||    
T  30633102 tttttagttata-acttgctaaaacacaccttctaaaaattaaatgggtgtattctagcaaatgcatgtagaagttgcta 30633180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 35550629 - 35550707
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | |||||||||||||||| |||||| ||||||||||||||||| | ||||||    
T  35550629 tttttagttata-acttgctaaaacacacattctaaaaaataagtgagtgtatcctagcaaatgcctataggagttgcta 35550707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 23544841 - 23544907
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||| |||||| || ||||||||||||||||||||||||||||| |||||| |||||| | ||||||    
T  23544841 acttactaaaacacaccttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgcta 23544907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 25123537 - 25123468
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||| ||||| || |||| ||||||||||||||||||||||||||||||| ||||||    
T  25123537 tttttagttata-acttgttaaaacacaccttttaaaaaataagtgggtgtattctagcaaatgtctatag 25123468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 407
Target Start/End: Complemental strand, 30207294 - 30207248
Alignment:
Q  361 taaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||    
T  30207294 taaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 30207248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 39934450 - 39934516
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||| ||| | ||||||    
T  39934450 acttgttaaaacacaccttctaaaaaataagttggtgtattctagcaaatgcctgtaggagttgcta 39934516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 45299639 - 45299693
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||    
T  45299639 ttgctaaaacacaccttcaaaaaaataagtgggtgtatcctagcaaatgcctata 45299693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 1201810 - 1201750
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||| || |||||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  1201810 taaaacacaccttctaaaatataagtgggtgtatcctagcaaatgcctataggagttgcta 1201750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 21352288 - 21352348
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||| || |||| ||||||    
T  21352288 taaaataccccttctaaaaaataagtgggtgtattatagcatatgcttacagaagttgcta 21352348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 34103160 - 34103081
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||||||||| || ||||||||||||||| ||| |||||  ||||||| |||||||||| ||||||    
T  34103160 ttttttagttata-acttgctaaaacacaccttctaaaaaataaatggatgtatcatagcaaaagcctatagaagttgcta 34103081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 2823639 - 2823717
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||| ||||| |||||||||| |||||| | ||||||    
T  2823639 tttttagttata-acttgctaaaacacactttctaaaaaataagtggatgtatcctagcaaatgtctataggagttgcta 2823717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 3369870 - 3369793
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||| |||||| ||||||||||||| ||||||||||||||||| | ||||||    
T  3369870 tttttagttata-acttgctaaaacacaccttttaaaaa-taagtgggtgtatcctagcaaatgcctataggagttgcta 3369793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 18804948 - 18804870
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||| ||||||| ||||||||||||||| |||||| ||||||| |||||| ||||| || ||||||    
T  18804948 tttttagttat-catttgttaaaatagtccttctaaaaaatatgtgggtttattctaacaaatggctataaaagttgcta 18804870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 26867972 - 26868038
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||| ||||||||||||||| || ||| |||||||||||| | ||||||    
T  26867972 acttgctaaaacacaccttctagaaaataagtgggtgtgttatagtaaatgcctataggagttgcta 26868038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 2178743 - 2178780
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa 365  Q
    |||||||||||||| |||||||||||||||||||||||    
T  2178743 tttttagttattcatttgctaaaatactccttctaaaa 2178780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 26043096 - 26043059
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    |||||||||||| |||||||||||||||||||||||||    
T  26043096 ttgctaaaatacaccttctaaaaaataagtgggtgtat 26043059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 45299743 - 45299698
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 388  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||    
T  45299743 ttgctaaaacacaccttctaaaaaataagtgggtgtatgctagcaa 45299698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 9413955 - 9413875
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||| |  |||| |||||||||||| | |||||||||||||||| |||||| | ||||||  | ||||||||||    
T  9413955 acttgctaaaacataccttttaaaaaataagtagatgtattctagcaaatgtctataggagttgctaacatacatccactt 9413875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 13290655 - 13290592
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgc 392  Q
    |||||||||||  ||||||||||| || ||||||||||| ||||||| ||||||||| |||||||    
T  13290655 tttttagttata-acttgctaaaacacaccttctaaaaattaagtggatgtattctaacaaatgc 13290592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 5946824 - 5946901
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| ||  |||||||||||||||| ||||||| |||||||||||| |||| | ||||||    
T  5946824 tttttagttata-acttgctaaaacacatcttctaaaaaataagt-ggtgtatcctagcaaatgccgataggagttgcta 5946901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 14819394 - 14819342
Alignment:
Q  401 tttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||    
T  14819394 tttgctagaacacatccacttgtttttttagaaggtgtgttatagcaacatac 14819342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 25128030 - 25127968
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    |||||||||||  ||||||||||| || ||||||||||| |||||| | |||||||||||||||    
T  25128030 tttttagttata-acttgctaaaacacaccttctaaaaattaagtgagagtattctagcaaatg 25127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 23544867 - 23544905
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  23544867 ataagtgggtgtattctaacaaatgtctataggagttgc 23544905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 44874200 - 44874230
Alignment:
Q  358 ttctaaaaaataagtgggtgtattctagcaa 388  Q
    |||||||||||||||||||||||||||||||    
T  44874200 ttctaaaaaataagtgggtgtattctagcaa 44874230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 184147 - 184184
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  184147 ttgctaaaacacaccttctaaaaaataagtgggtgtat 184184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 1201710 - 1201747
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  1201710 ttgctaaaacacaccttctaaaaaataagtgggtgtat 1201747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 10616332 - 10616369
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  10616332 ttgctaaaacacaccttctaaaaaataagtgggtgtat 10616369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 17691256 - 17691293
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  17691256 ttgctaaaacacaccttctaaaaaataagtgggtgtat 17691293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 26630070 - 26630107
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  26630070 ttgctaaaacacaccttctaaaaaataagtgggtgtat 26630107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 42556821 - 42556757
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcc 393  Q
    |||||||||||  ||||||||||| || | ||| |||||||||||| |||||| ||||||||||||    
T  42556821 tttttagttata-acttgctaaaacacacattcaaaaaaataagtgagtgtatcctagcaaatgcc 42556757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 9483956 - 9484035
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||||||||| ||  |||||||||||||||||||| |||  || ||||||| ||||| | ||||||    
T  9483956 ttttttagttata-acttgctaaaacacatcttctaaaaaataagtgggtatatcttaacaaatgcttataggagttgcta 9484035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 10216411 - 10216286
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  10216411 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 10216312  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  10216311 ttagaaggtgtgttatagcaacatac 10216286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 13211873 - 13211998
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  13211873 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 13211972  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  13211973 ttagaaggtgtgttatagcaacatac 13211998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 5046801 - 5046675
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||        
T  5046801 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccacttgtttt 5046702  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  5046701 tttagaaggtgtgttatagcaacatac 5046675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 12584446 - 12584320
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||         
T  12584446 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacatacccacttgttttt 12584347  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  12584346 tttagaaggtgtgttatagcaacatac 12584320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 17745205 - 17745329
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||        
T  17745205 ttttttagttattcacttgctaaaatactccttctaaaaaataggtgggtgtattctagc--atgcctataggatttgctagaacacatccacttgtttt 17745302  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  17745303 tttagaaggtgtgttatagcaacatac 17745329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 5157056 - 5157181
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||         
T  5157056 tttttagttattcacttactaaaatactccttctaaaaaataagtgggtgtattctagcaaaggcctataggatttgctagaacacacccatttgttttt 5157155  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  5157156 ttagaaggtgtgttatagcaacatac 5157181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 13371269 - 13371394
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||         
T  13371269 tttttagttattcacttactaaaatactccttctaaaacataagtggttgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 13371368  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  13371369 ttagaaggtgtgttatagcaacatac 13371394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 13381470 - 13381595
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||         
T  13381470 tttttagttattcacttactaaaatactccttctaaaacataagtggttgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 13381569  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  13381570 ttagaaggtgtgttatagcaacatac 13381595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 41172468 - 41172593
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||          
T  41172468 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacacccatttattttt 41172567  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  41172568 ttagaaggtgtgttatagcaacatac 41172593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 48560056 - 48560181
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  48560056 tttttagttattaaattgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 48560155  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||| | ||||||||    
T  48560156 ttagaaggtgtgttaaaacaacatac 48560181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 13621474 - 13621380
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  13621474 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttg 13621380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 17377550 - 17377677
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnn 425  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||| |||||||        
T  17377550 ttttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaaagcctataggatttgctagaacacacccacttgtttt 17377649  T
Q  426 nnnnagaaggtgtgttatagcaacatac 453  Q
        ||||||||||||||||||||||||    
T  17377650 tgttagaaggtgtgttatagcaacatac 17377677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 3818802 - 3818895
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||    
T  3818802 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtttataggatttgctagaacacacccactt 3818895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 14203030 - 14202904
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||         
T  14203030 tttttagttatccacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacactcacttgctttt 14202931  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  14202930 tttagaaggtgtgttatagcaacatac 14202904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 30258287 - 30258161
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||        
T  30258287 ttttttagttattcatttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacactcacttgtttt 30258188  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       |||| | |||||||||||||||||    
T  30258187 tttagaatgcgtgttatagcaacatac 30258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 42808071 - 42807978
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  42808071 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccactt 42807978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 50182233 - 50182356
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||| |||||||         
T  50182233 tttttagttattcacttgctaaaatactgcttctaaaaaataagtgagtgtattctaacaaatgcctat--aatttgctagaacacacccacttgttttt 50182330  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  50182331 ttagaaggtgtgttatagcaacatac 50182356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 49970653 - 49970777
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||         
T  49970653 tttttagttattcattttctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgcta-aacacacccacttgttttt 49970751  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      || |||||||||||||||||||||    
T  49970752 ttagtaggtgtgttatagcaacatac 49970777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 6214041 - 6214135
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  6214041 tttttagttattcacttgctaaaatacttcttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttg 6214135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 7630115 - 7630209
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  7630115 tttttagttattcacttgctaaaatactccttctaaaatctaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttg 7630209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 10981461 - 10981367
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||    
T  10981461 tttttagttattcacttgctaaaatactccttctagaaaataagtggatgtattctagcaaatgcctataaaatttgttagaacacacccacttg 10981367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 13621156 - 13621281
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||         
T  13621156 tttttagttattcacttgctaaaatactcattctaaaaaataagt-ggtgtatcctagcaaatgcctataggatttgctagaacacacccacttgttttt 13621254  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  13621255 tttagaaggtgtgttatagcaacatac 13621281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 18470315 - 18470399
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaaca 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  18470315 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatggctatagaatttactagaaca 18470399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 578919 - 578837
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaa 410  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  578919 tttttagttattcatttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaa 578837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 17181008 - 17181102
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  17181008 tttttagttattaaattgcaaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacgcacccacttg 17181102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 21519789 - 21519883
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  21519789 tttttagttattgatttgctaaaatacttcttctaaaaaataagtgggtgtattctagcaaatgcctataggatttactagaacacacccacttg 21519883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 51784130 - 51784003
Alignment:
Q  328 tttttagttattcacttgctaaaatactcc-ttctaaaaaataagt-gggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnn 425  Q
    |||||||||||| | || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||       
T  51784130 tttttagttatttatttactaaaatactcccttctaaaaaataagtagggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttt 51784031  T
Q  426 nnnnagaaggtgtgttatagcaacatac 453  Q
        ||||||||||||||||||||||||    
T  51784030 atttagaaggtgtgttatagcaacatac 51784003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 34683208 - 34683082
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||         
T  34683208 tttttagttatttaattgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctatatgatttgctagaacacacccacttgttttt 34683109  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  34683108 gttagaaggtgtgttatagcaacatac 34683082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 343 - 453
Target Start/End: Original strand, 26958610 - 26958720
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgtta 442  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||       |||||||||||||    
T  26958610 ttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctatatgatttgctagaacacacccacttgtttttttagaaggtgtgtta 26958709  T
Q  443 tagcaacatac 453  Q
    |||||||||||    
T  26958710 tagcaacatac 26958720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 30820649 - 30820523
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaa-taagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| ||| | | ||         
T  30820649 tttttagttattcacttggtaaaatactccttctaaaaaaataagtgggtgtcttctagcaaatgcctataggatttgctagaatacaccaatttatttt 30820550  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  30820549 tttagaaggtgtgttatagcaacatac 30820523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 45801868 - 45801934
Alignment:
Q  331 ttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  45801868 ttagttattcacttgctaaaatactccttctaaaaaataagtggatgtattctaacaaatgcctata 45801934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 52437597 - 52437505
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||| |||||| |||||| | ||||||||||||| ||||||    
T  52437597 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaatgtctataggagttgctagaacacacccactt 52437505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 6137670 - 6137592
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  |||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6137670 tttttagttata-acttactaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 6137592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 9744291 - 9744225
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  9744291 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 9744225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 15725218 - 15725297
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  |||| |||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  15725218 ttttttagttata-acttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 15725297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 20459005 - 20458926
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  20459005 ttttttagttata-acttgctaaaacacatcttctaaaaaataagtgggtatattctagcaaatgcctataggagttgcta 20458926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 49425917 - 49425853
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  49425917 ttgctaaaacacaccttctaaaaaataagtaggtgtatcctagcaaatgcctatagaagttgcta 49425853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 4712697 - 4712775
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| | ||||||    
T  4712697 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattttagcgaatgcctataggagttgcta 4712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 6946685 - 6946763
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  6946685 tttttagttata-acttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 6946763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 16553465 - 16553543
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  16553465 tttttagttata-acttgctaaaacacactttctaaaaaataagtggatgtattctagcaaatgcctataggagttgcta 16553543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 26335781 - 26335859
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| | ||||||    
T  26335781 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgcta 26335859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 40496314 - 40496236
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | |||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  40496314 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgtctataggagttgcta 40496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 6193115 - 6193058
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||    
T  6193115 acttgctaaaacacaccttctaaaaaataagtgagtgtattctagcaaatgcttatag 6193058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 46106714 - 46106781
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctat 396  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||| |||||||||||||||    
T  46106714 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctat 46106781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 11777667 - 11777589
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  |||| |||||| || ||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  11777667 tttttagttata-acttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgcta 11777589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 407
Target Start/End: Complemental strand, 23384067 - 23384016
Alignment:
Q  356 ccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  23384067 ccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 23384016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 38425823 - 38425745
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||| ||||||| ||||||||||||||||||| | ||||||    
T  38425823 tttttagttata-acttgctaaaacacacattctaaaaaataaatgggtgtgttctagcaaatgcctataggagttgcta 38425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 49606071 - 49606130
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaa 400  Q
    |||||||||||  | ||||||||||||||||||||||||| ||||||||||| |||||||    
T  49606071 acttgctaaaacgcaccttctaaaaaataagtgggtgtatcctagcaaatgcatatagaa 49606130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 14863040 - 14863090
Alignment:
Q  357 cttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  14863040 cttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 14863090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 33811085 - 33811177
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||  ||||||||||| || | ||||||||| |||||||||||||| |||||||||||| ||| | ||||||  | ||||||||||    
T  33811085 tttttagttata-acttgctaaaacacactttctaaaaattaagtgggtgtattatagcaaatgcctgtaggagttgctaacatacatccactt 33811177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 36955397 - 36955465
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || | || ||||||||||||| |||||||||||||||||||||||    
T  36955397 tttttagttata-acttgctaaaacacacattataaaaaataagtgagtgtattctagcaaatgcctata 36955465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 45875813 - 45875877
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| || | ||| ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  45875813 ttgctaaaacacacattcaaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 45875877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 54742500 - 54742556
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||| || | |||||||| ||||||||||||||| |||||||||||||||    
T  54742500 acttgctaaaacacacattctaaaatataagtgggtgtattttagcaaatgcctata 54742556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 421
Target Start/End: Original strand, 43639068 - 43639131
Alignment:
Q  358 ttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||| |||||| |||||| | ||||||  | ||||||||||    
T  43639068 ttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgctaacatacatccactt 43639131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 6137538 - 6137630
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    ||||||||||| | |||||||||| || |||||||||||||||||||||||||  |||||| | |||||| | ||||||||||| ||| ||||||    
T  6137538 tttttagttatac-cttgctaaaacacaccttctaaaaaataagtgggtgtatgttagcaact-cctataggcatttgctagaatacacccactt 6137630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 33105964 - 33106030
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || |||| ||||||||||||||| |||| |||||||||| |||||| | ||||||    
T  33105964 acttgctaaaacacaccttttaaaaaataagtgggcgtatcctagcaaatgtctataggagttgcta 33106030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 407
Target Start/End: Original strand, 142692 - 142737
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  142692 aaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 142737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 43639017 - 43639072
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattcta 384  Q
    |||||||||||  ||||||||||| ||  ||||||||||||||||||||||||||||    
T  43639017 tttttagttata-acttgctaaaacacatcttctaaaaaataagtgggtgtattcta 43639072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 47382219 - 47382302
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||| ||||||||||||||||||||||| |||||||||           |||| ||||| |||||||||| ||||| |||||||||||||||||    
T  47382219 tttttggttattcacttgctaaaatactctttctaaaaa-----------tattttagcatatgcctataggatttgttagaacacatccacttg 47382302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 407
Target Start/End: Original strand, 52306835 - 52306886
Alignment:
Q  356 ccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||| ||||||| |||||||||| |||||| | ||||||    
T  52306835 ccttctaaaaaataagtaggtgtatcctagcaaatgtctataggagttgcta 52306886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 5046761 - 5046723
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  5046761 ataagtgggtgtattctagcaaatgtctataggatttgc 5046723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 29102037 - 29102087
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    ||||||||||| ||  ||| |||||||||||||||||||| ||||||||||    
T  29102037 acttgctaaaacacatcttataaaaaataagtgggtgtatcctagcaaatg 29102087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 30258289 - 30258323
Alignment:
Q  335 ttattcacttgctaaaatactccttctaaaaaata 369  Q
    ||||||| |||||||||||||||||||||||||||    
T  30258289 ttattcatttgctaaaatactccttctaaaaaata 30258323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 43639077 - 43639115
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  43639077 ataagtgggtgtattctaacaaatgtctataggagttgc 43639115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 6946803 - 6946766
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  6946803 ttgctaaaacacaccttctaaaaaataagtgggtgtat 6946766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 14863130 - 14863093
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  14863130 ttgctaaaacacaccttctaaaaaataagtgggtgtat 14863093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 26335899 - 26335862
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  26335899 ttgctaaaacacaccttctaaaaaataagtgggtgtat 26335862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 3818902 - 3818843
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||||| ||| ||||||    
T  3818902 aaaaaataagtgggtgtgttctagcaaat-cctataaacatttgctagaatacacccactt 3818843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 5046700 - 5046759
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    |||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||    
T  5046700 aaaaaacaagtgggtgtgttctagcaaat-cctatagacatttgctagaatacacccactt 5046759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 49425813 - 49425849
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgta 379  Q
    ||||||||| || ||||||||||||||||||||||||    
T  49425813 ttgctaaaacacaccttctaaaaaataagtgggtgta 49425849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 7848560 - 7848681
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  7848560 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 7848659  T
Q  428 nnagaaggtgtgttatagcaac 449  Q
      ||||||||||||||||||||    
T  7848660 ttagaaggtgtgttatagcaac 7848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 6748811 - 6748686
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||         
T  6748811 tttttagttattcacttgctaaaatactccttctaaaaaagaagtgggtgtattctagcaaatgcttataggatttgctagaacacacccacttgttttt 6748712  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  6748711 ttagaaggtgtgttatagcaacatac 6748686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 26158394 - 26158268
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  26158394 tttttagttattcacttgctaaaatactccttctaaaaaataagtaggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 26158295  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  26158294 tctagaaggtgtgttatagcaacatac 26158268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 11460183 - 11460308
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||  ||||||         
T  11460183 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgcattctagcaaatgcctataggatttgctagagcacactcacttgttttt 11460282  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  11460283 ttagaaggtgtgttatagcaacatac 11460308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 37504574 - 37504699
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||| |||||||         
T  37504574 tttttagttattcactttctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgtctataggatttgctagaacacacccacttgttttt 37504673  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  37504674 ttagaaggtgtgttatagcaacatac 37504699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 6114814 - 6114940
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||         
T  6114814 tttttagttatttacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccacttgctttt 6114913  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  6114914 tctagaaggtgtgttatagcaacatac 6114940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 994883 - 994758
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| |||         
T  994883 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttggtagaacacacccaattgttttt 994784  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||||||||||||||||| |||||    
T  994783 ttagaaggtgtgttatagcagcatac 994758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 21727678 - 21727772
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  21727678 tttttagttatttacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctgtaggatttgctagaacacacccacttg 21727772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 51952234 - 51952328
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  51952234 tttttagttattcacttgctaaaatactccttctaaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccactt 51952328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 6109326 - 6109200
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||         
T  6109326 tttttagttattcacttgctaaaatactcattctaaaaaataaatgggtgtattctagcaaatgcctatatgatttgctagaacacacccacttgctttt 6109227  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  6109226 tttagaaggtgtgttatagcaacatac 6109200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 12896670 - 12896796
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||         
T  12896670 tttttagttattcacttgctaaaatactccttccaaaaattaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttgttttt 12896769  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  12896770 gttagaaggtgtgttatagcaacatac 12896796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 47461727 - 47461820
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  47461727 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccactt 47461820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 8815365 - 8815489
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||         
T  8815365 tttttagttattcacttgcgaaaatactccttctaaaaa-taagtaggtgtattctagcaaatgcctataggatttgctaaaacacacccacttgttttt 8815463  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  8815464 ttagaaggtgtgttatagcaacatac 8815489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 38798011 - 38798105
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||    
T  38798011 tttttagttattcacttgttaaaatactccttctaaaaaataagtggatgtattttagcaaatgcctataggatttgctagaacacacccacttg 38798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 995190 - 995064
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaa-taagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| | |||||||        
T  995190 tttttagttattcatttgctaaaatactccttctaaaaaaataagtggttgtattctagcaaatgcctataggatttgctagaacatacccacttgtttt 995091  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||| ||||||||||    
T  995090 tttagaaggtgtgttacagcaacatac 995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 7521391 - 7521517
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||         
T  7521391 tttttagttattcacttgctaaaatattctttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgctagaatacacccacttgctttt 7521490  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  7521491 tctagaaggtgtgttatagcaacatac 7521517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 17065758 - 17065884
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||| |||||||        
T  17065758 ttttttagttattcatttgctaaaatactccttctaaaaaataagtgggtacattctagcaaatgtctataggatttgctagaacacacccacttgtttt 17065857  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       |||||||||||||||  |||||||    
T  17065858 tttagaaggtgtgttataataacatac 17065884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 45059694 - 45059601
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||| ||||||    
T  45059694 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaaatgtctataggatttgctagaacacacccactt 45059601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 4043661 - 4043743
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaa 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  4043661 tttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgttagaa 4043743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 3544321 - 3544416
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||||    
T  3544321 tttttaattcttcacttgctaaaatactccttctaaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaatacacccacttg 3544416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 26152359 - 26152273
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacaca 414  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||||||||||| ||||| |||||||||    
T  26152359 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcttaccaaatgcctataggatttgatagaacaca 26152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 2868325 - 2868232
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||| ||||||    
T  2868325 tttttatttattcacttgctaaaacactcattctaaaaaataagtgggtgtatcctagcaaatgcctatatgatttgctagaaaacacccactt 2868232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 27728224 - 27728317
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||||||||||| |||||||| |||||| ||||||    
T  27728224 tttttagttattcacttgctaaaatattccttctaaaaactaagtgggtgtatctaagcaaatgcctataggatttgctaaaacacacccactt 27728317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 17226336 - 17226270
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcct 394  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  17226336 tttttagttattcacttgctaaaatatttcttctaaaaaataagtgggtgtattctagcaaatgcct 17226270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 51148173 - 51148080
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||  |||||| ||||||||||||||| |||||||    
T  51148173 tttttagttattcacttactaaaatactcattctaaaaaataagtgggtgcgttctagcaaat-tctataggatttgctagaacacacccacttg 51148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 452
Target Start/End: Original strand, 52654387 - 52654472
Alignment:
Q  367 ataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacata 452  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||  |||||        |||||||||||||||||||||||    
T  52654387 ataagtgggtgtattttagcaaatgcctatagaatttgctagaacacactcacttatttttttagaaggtgtgttatagcaacata 52654472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 27800497 - 27800548
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgta 379  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27800497 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgta 27800548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 50801602 - 50801680
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  50801602 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 50801680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 50874278 - 50874200
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  50874278 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 50874200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 53467515 - 53467449
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgccta 395  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  53467515 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgccta 53467449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 8814818 - 8814884
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8814818 acttgctaaaacacaccttcaaaaaaataagtgggtgtattctagcaaatgcttatagaagttgcta 8814884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 13349163 - 13349230
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctat 396  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  13349163 tttttagttata-acttgctaaaacacgccttctaaaaaataagtgggtgtatcctagcaaatgcctat 13349230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 32203193 - 32203249
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  32203193 acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctata 32203249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 26152626 - 26152546
Alignment:
Q  374 ggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnnnnnagaaggtgtgttatagcaacatac 453  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||        ||||||||||||||||||||||||    
T  26152626 ggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttttctagaaggtgtgttatagcaacatac 26152546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 27317667 - 27317745
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||| | ||||||    
T  27317667 tttttagttata-acttgctaaaacacaccttttaaaaaataagtggatgtattctagcaaatgcctataggagttgcta 27317745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 31039721 - 31039643
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  31039721 tttttagttata-acttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 31039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 34277630 - 34277589
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattcta 384  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34277630 ttgctaaaatactccttctaaaaaataagtgggtgtattcta 34277589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 1376162 - 1376084
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||| ||||| ||||||||||||||||| | ||||||    
T  1376162 tttttagttata-acttgctaaaacacacattctaaaaaataagtggatgtatcctagcaaatgcctataggagttgcta 1376084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 407
Target Start/End: Original strand, 12127584 - 12127647
Alignment:
Q  344 tgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||| || ||||||||||||||||||||||||| |||| |||||||||||| | ||||||    
T  12127584 tgctaaaacacaccttctaaaaaataagtgggtgtatcctagaaaatgcctataggagttgcta 12127647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 53581587 - 53581665
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||||||||||||||||||||||||  ||||||||| |||||| | ||||||    
T  53581587 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcttagcaaatgtctataggagttgcta 53581665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 17605513 - 17605579
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| |  ||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  17605513 acttgctaaaacaaaccttctaaaaaataagtgggtgtatcctagcaaatgcatataggagttgcta 17605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 27360137 - 27360064
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||| || |||||||||||||||||||||||||  |||||| | ||||||| ||||||||||| ||||||||||    
T  27360137 taaaacacaccttctaaaaaataagtgggtgtatgttagcaact-cctatagcatttgctagaatacatccactt 27360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 33837962 - 33837896
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || |||||||||||||||||| |||||| |||||||||| |||||| | ||||||    
T  33837962 acttgctaaaacacaccttctaaaaaataagtgagtgtatcctagcaaatgtctataggagttgcta 33837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 407
Target Start/End: Complemental strand, 50913147 - 50913086
Alignment:
Q  346 ctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||||| ||| | ||||||    
T  50913147 ctaaaacacaccttctaaaaattaagtgggtgtattctagcaaatgcctgtaggagttgcta 50913086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 453
Target Start/End: Complemental strand, 3269333 - 3269269
Alignment:
Q  389 atgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    |||||||||| ||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  3269333 atgcctataggatttgctagaacacacccacttgtttttttagaaggtgtgttatagcaacatac 3269269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 27360036 - 27360087
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgc 392  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||||||||    
T  27360036 acttgctaaaacacaccttataaaaaataagtggatgtattctagcaaatgc 27360087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 37504613 - 37504651
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37504613 ataagtgggtgtattctaacaaatgtctataggatttgc 37504651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 3800343 - 3800306
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    |||||||||||| |||||||||||||||||||||||||    
T  3800343 ttgctaaaatacaccttctaaaaaataagtgggtgtat 3800306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 361
Target Start/End: Complemental strand, 21408644 - 21408611
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttct 361  Q
    ||||||||||||||||||||||||||||||||||    
T  21408644 tttttagttattcacttgctaaaatactccttct 21408611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 3800224 - 3800295
Alignment:
Q  328 tttttagttattcacttgctaaaatact-ccttctaaaaaataagtgggtgtattctagcaaatgcctataga 399  Q
    |||||||||||  ||||||||||| ||  ||||||||||||||||||||||||| |||| |||||| ||||||    
T  3800224 tttttagttata-acttgctaaaacacaaccttctaaaaaataagtgggtgtatcctagaaaatgcttataga 3800295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 51148081 - 51148132
Alignment:
Q  369 aagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||| ||||||||||| |||||||||||||||||||| || ||||||    
T  51148081 aagtgggtgtgttctagcaaat-cctatagaatttgctagaacgcacccactt 51148132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 52654381 - 52654425
Alignment:
Q  246 atatatataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||    
T  52654381 atatatataagtgggtgtattttagcaaatgcctatagaatttgc 52654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 398
Target Start/End: Complemental strand, 53455699 - 53455663
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||| ||||||||||||||||||||||||||||||    
T  53455699 aaaaaagaagtgggtgtattctagcaaatgcctatag 53455663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 26103780 - 26103730
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgt 378  Q
    ||||||||||||  ||||||||||| || |||||||||||||||||||||||    
T  26103780 ttttttagttata-acttgctaaaagacaccttctaaaaaataagtgggtgt 26103730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 397
Target Start/End: Original strand, 29950609 - 29950644
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||||||||||||||| ||||||||||||    
T  29950609 aaaaaataagtgggtgtattctatcaaatgcctata 29950644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 397
Target Start/End: Original strand, 29999763 - 29999798
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||||||||||||||| ||||||||||||    
T  29999763 aaaaaataagtgggtgtattctatcaaatgcctata 29999798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 396
Target Start/End: Original strand, 36823995 - 36824050
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctat 396  Q
    ||||||||||| || |||||||||||| ||||   |||||||||||||||||||||    
T  36823995 acttgctaaaacacaccttctaaaaaacaagttcttgtattctagcaaatgcctat 36824050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 6114853 - 6114891
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  6114853 ataagtgggtgtattctagcaaatgtctataggatttgc 6114891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 7521430 - 7521468
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  7521430 ataagtgggtgtattctaacaaatgcctataggatttgc 7521468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 27317772 - 27317707
Alignment:
Q  356 ccttctaaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    |||||||||||||||||||||||||  |||||| | |||||| | ||||||||||| ||||||||||    
T  27317772 ccttctaaaaaataagtgggtgtatgttagcaact-cctataggcatttgctagaatacatccactt 27317707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 48765377 - 48765316
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaat 390  Q
    |||||||||||  |||| |||||| || ||||||||||||||| |||||||||| ||||||||    
T  48765377 tttttagttata-acttactaaaacacaccttctaaaaaataaatgggtgtattttagcaaat 48765316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 12127687 - 12127650
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  12127687 ttgctaaaacacaccttctaaaaaataagtgggtgtat 12127650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 29950694 - 29950657
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  29950694 ttgctaaaacacttcttctaaaaaataagtgggtgtat 29950657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 29999848 - 29999811
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  29999848 ttgctaaaacacttcttctaaaaaataagtgggtgtat 29999811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 3269427 - 3269467
Alignment:
Q  358 ttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||||||| |||||| ||||||||||| |||||    
T  3269427 ttctaaaaaataagtgtgtgtatcctagcaaatgcatatag 3269467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 51952335 - 51952276
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||||| ||| ||||||    
T  51952335 aaaaaataagtgggtgtgttctagcaaat-cctataggcatttgctagaatacacccactt 51952276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 38876326 - 38876200
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  38876326 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 38876227  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  38876226 tttagaaggtgtgttatagcaacatac 38876200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 12080738 - 12080863
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||          
T  12080738 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttattttt 12080837  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  12080838 ttagaaggtgtgttatagcaacatac 12080863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 14777966 - 14778091
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||         
T  14777966 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccacttgtttgt 14778065  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||| ||||||||||||||    
T  14778066 ttagaaggtgtattatagcaacatac 14778091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 15230104 - 15230229
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||         
T  15230104 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccacttgtttgt 15230203  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||| ||||||||||||||    
T  15230204 ttagaaggtgtattatagcaacatac 15230229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 32852896 - 32853021
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||         
T  32852896 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctataacacacccacttgttttt 32852995  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  32852996 ttagaaggtgtgttatagcaacatac 32853021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 328 - 452
Target Start/End: Complemental strand, 14719152 - 14719028
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||         
T  14719152 tttttagttattcacttgttaaaatactccttctaaaaaataagtgggtgtattccagcaaatgcctataggatttgctagaacacacccacttgttttt 14719053  T
Q  428 nnagaaggtgtgttatagcaacata 452  Q
      |||||||||||||||||||||||    
T  14719052 ttagaaggtgtgttatagcaacata 14719028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 45225432 - 45225526
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45225432 tttttagttattaacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacacccacttg 45225526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 20516959 - 20517085
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  20516959 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 20517058  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  20517059 tttagaaggtgtgttatagcaacatac 20517085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 27811981 - 27812106
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||         
T  27811981 tttttagttattcacttgttaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctacaggatttgctagaacacacccacttgttttt 27812080  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||| ||||||||||||||    
T  27812081 ttagaaggtgtattatagcaacatac 27812106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 28605481 - 28605605
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||         
T  28605481 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatacctatagaatttgctaaaacacacccacttg-tttt 28605579  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||| ||||||||||||||||    
T  28605580 ttagaaggtatgttatagcaacatac 28605605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 48454703 - 48454609
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  48454703 tttttagttcttcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctataggatttgctagaacacacccacttg 48454609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 11327635 - 11327728
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  11327635 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccactt 11327728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 18123240 - 18123114
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||         
T  18123240 tttttagttattcacttactaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttgctttt 18123141  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  18123140 gtcagaaggtgtgttatagcaacatac 18123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 43711951 - 43712077
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||| ||||||||||||||| |||||||        
T  43711951 tttttagttattcacttgctaaaatactccttctaaaaaaataagtgggtatattctagcaaatgtatatagtatttgctagaacacacccacttgtttt 43712050  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  43712051 tttagaaggtgtgttatagcaacatac 43712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 413
Target Start/End: Original strand, 45225299 - 45225384
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacac 413  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45225299 tttttagttattaacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacac 45225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 24720300 - 24720425
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||          
T  24720300 tttttagttatttatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccatttattttt 24720399  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||||||| |||||||||||||||    
T  24720400 ttagaaggtgcgttatagcaacatac 24720425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 4655084 - 4655178
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||    
T  4655084 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtattttagcaaatgcttataggatttgctagaacacacccacttg 4655178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 48193192 - 48193286
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  48193192 tttttagttattcatttgttaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctataggatttgctagaacacacccacttg 48193286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 34986564 - 34986657
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  34986564 tttttagttcttcacttgctaaaatactctttctaaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacattcactt 34986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 7437957 - 7437863
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||| |||||| |||||||    
T  7437957 tttttagttattcacttgctaaaatactcattctaaaaaataattgggtgtattctagcaaatgcctataggatttactataacacacccacttg 7437863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 14770124 - 14770239
Alignment:
Q  338 ttcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtg 437  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||       ||||||||    
T  14770124 ttcacttgcgaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctataacacactcacttgtttttttagaaggtg 14770223  T
Q  438 tgttatagcaacatac 453  Q
    |||||||| |||||||    
T  14770224 tgttatagaaacatac 14770239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 15220575 - 15220690
Alignment:
Q  338 ttcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtg 437  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||       ||||||||    
T  15220575 ttcacttgcgaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctataacacactcacttgtttttttagaaggtg 15220674  T
Q  438 tgttatagcaacatac 453  Q
    |||||||| |||||||    
T  15220675 tgttatagaaacatac 15220690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 22479245 - 22479339
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||| |||||||    
T  22479245 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtatataggatttgatagaacacacccacttg 22479339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 26380234 - 26380140
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  26380234 tttttagttattcacttgctaaaatactcattctaaaaactaagcgggtgtatcctagcaaatgcctataggatttgctagaacacattcacttg 26380140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 8048127 - 8048041
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacaca 414  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||    
T  8048127 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgtctgtaggatttgctataacaca 8048041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 335 - 421
Target Start/End: Complemental strand, 37139087 - 37139001
Alignment:
Q  335 ttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||| ||||||    
T  37139087 ttattcacttgctaaaatactccttctaaaaaataagtgggtgtattttagcaaatgtctataggatttgttagaacacacccactt 37139001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 33889121 - 33889179
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagc 386  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33889121 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagc 33889179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 1325388 - 1325335
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtatt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1325388 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtatt 1325335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 25818523 - 25818601
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  25818523 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 25818601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 361 - 453
Target Start/End: Original strand, 32577615 - 32577707
Alignment:
Q  361 taaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||        ||||| |||||||||||||||||    
T  32577615 taaaaaataagtgggtgtattctagcaaatgcttataggatttgctagaacacacccacttgtttttttggaaggcgtgttatagcaacatac 32577707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 328 - 398
Target Start/End: Original strand, 27597059 - 27597129
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  27597059 tttttagttatttatttgctaaaatactcattctaaaaaataagtggatgtattctagcaaatgtctatag 27597129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 18199607 - 18199655
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggt 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18199607 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggt 18199655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 18352473 - 18352395
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  18352473 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 18352395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 41407381 - 41407459
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  41407381 tttttagttata-acttgctaaaacacactttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 41407459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 454155 - 454221
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| | ||||||    
T  454155 acttgctaaaatacaccttctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgcta 454221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 938934 - 939012
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  938934 tttttagttata-acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 939012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 2936679 - 2936757
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||||||| |||| | ||||||    
T  2936679 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgccaataggagttgcta 2936757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 9401798 - 9401735
Alignment:
Q  344 tgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  9401798 tgctaaaacacaccatctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 9401735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 28912121 - 28912199
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||||||| |||| | ||||||    
T  28912121 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcccataggagttgcta 28912199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 38368013 - 38367944
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||    
T  38368013 tttttagttata-acttgctaaaacacaccttttaaaaaataagtggctgtattctagcaaatgcctatag 38367944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 11766160 - 11766228
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||    
T  11766160 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcatata 11766228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 27168292 - 27168356
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| | ||||||    
T  27168292 ttgctaaaacacaccttctaaaaaataagtgggtgtatcctaccaaatgcctataggagttgcta 27168356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 2509477 - 2509409
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||    
T  2509477 tttttagttata-acttgctaaaacacaccttctaaaaa-taagtgggtgtattctagcaaatgcatatag 2509409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 453
Target Start/End: Original strand, 33889847 - 33889921
Alignment:
Q  379 attctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    |||||||||||||||||||  ||||||||||||||| |||||||       |||||||| |||||||||||||||    
T  33889847 attctagcaaatgcctatatgatttgctagaacacacccacttgtttttttagaaggtgcgttatagcaacatac 33889921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 38796982 - 38796903
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||| ||||| || |||| ||||||||||| ||||||||||||||||||| |||||| | ||||||    
T  38796982 ttttttagttata-acttgttaaaacacaccttttaaaaaataagcgggtgtattctagcaaatgtctataggagttgcta 38796903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 2634019 - 2633972
Alignment:
Q  360 ctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  2634019 ctaaaaaataagtaggtgtattctagcaaatgcctataggagttgcta 2633972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 32577544 - 32577607
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttct-aaaaaataagtgggtgtattctagcaaat 390  Q
    |||||||||||| | ||||||||||||||||||| |||||| || ||||||| |||||||||||    
T  32577544 tttttagttattgatttgctaaaatactccttctaaaaaaacaaatgggtgtgttctagcaaat 32577607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 19069447 - 19069513
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || | ||||||||||||||||||||||| |||||||||  |||||| | ||||||    
T  19069447 acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatagctataggagttgcta 19069513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 2362819 - 2362880
Alignment:
Q  360 ctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||||||||||| |||||||||| |||||| | ||||||  | ||||||||||    
T  2362819 ctaaaaaataagtgggtgtatcctagcaaatgtctataggagttgctaacatacatccactt 2362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 407
Target Start/End: Complemental strand, 6736634 - 6736589
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||    
T  6736634 aaaaaataagtaggtgtattctagcaaatgcctataggagttgcta 6736589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 18829710 - 18829759
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtg 377  Q
    ||||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  18829710 tttttagttattcacttactaaaatactcttttaaaaaaataagtgggtg 18829759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 37139055 - 37139018
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttg 289  Q
    |||||||||||||||||| |||||||||||||||||||    
T  37139055 ataagtgggtgtattttagcaaatgtctataggatttg 37139018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 14778086 - 14778007
Alignment:
Q  343 ttgctaaaatactccttctaaa-aaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    |||||| ||||| ||||||||| ||| |||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||    
T  14778086 ttgctataatacaccttctaaacaaacaagtgggtgtgttctagcaaat-cctatagacatttgctagaatacacccactt 14778007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 15230224 - 15230145
Alignment:
Q  343 ttgctaaaatactccttctaaa-aaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    |||||| ||||| ||||||||| ||| |||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||    
T  15230224 ttgctataatacaccttctaaacaaacaagtgggtgtgttctagcaaat-cctatagacatttgctagaatacacccactt 15230145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 23740077 - 23740156
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||| ||||| || |||||||||| ||||||| ||||||||||| ||||||||||||| | ||||||    
T  23740077 tttttagttata-acttgttaaaacacaccttctaaaaaaataagtaggtgtattctaacaaatgcctataggagttgcta 23740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 27168410 - 27168359
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    |||||||||||  ||||||||||| || |||||||||||||||||||||||||    
T  27168410 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtat 27168359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 15957371 - 15957301
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaa-taagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || |||||||||||| ||||| ||||||| |||||||||| ||||||    
T  15957371 tttttagttata-acttgctaaaacacaccttctaaaaaaataagttggtgtatcctagcaaatgtctatag 15957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 18829775 - 18829826
Alignment:
Q  370 agtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||| ||| ||||||||||||| |||||||||||||||||| || ||||||    
T  18829775 agtggatgtgttctagcaaatgcttatagaatttgctagaacgcacccactt 18829826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 41037397 - 41037475
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | |||| ||| |||| |||||||||| |||||||||||||||| | ||||||    
T  41037397 tttttagttata-acttgctaaaacacacattcttaaatataactgggtgtattttagcaaatgcctataggagttgcta 41037475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 7437808 - 7437746
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaat 390  Q
    ||||||||||||||||| ||||||||||||  |  |||||  ||||||||| |||||||||||    
T  7437808 tttttagttattcacttactaaaatactcccacataaaaactagtgggtgtgttctagcaaat 7437746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 14778005 - 14778043
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  14778005 ataagtgggtgtattctagcaaatgtctataggatttgc 14778043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 15230143 - 15230181
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  15230143 ataagtgggtgtattctagcaaatgtctataggatttgc 15230181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 32852935 - 32852973
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  32852935 ataagtgggtgtattctagcaaatgtctataggatttgc 32852973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 380
Target Start/End: Original strand, 38367894 - 38367932
Alignment:
Q  342 cttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    |||||||||| || |||||||||||||||||||||||||    
T  38367894 cttgctaaaacacaccttctaaaaaataagtgggtgtat 38367932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 48193231 - 48193269
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  48193231 ataagtgggtgtattctaacaaatgcctataggatttgc 48193269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 48454664 - 48454626
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  48454664 ataagtgggtgtattctagcaaatgtctataggatttgc 48454626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 6559396 - 6559464
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| |  | ||||| |||||||| ||||||||| |||||||||||||||    
T  6559396 tttttagttata-acttgctaaaacatacattctataaaataagcgggtgtattatagcaaatgcctata 6559464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 12080838 - 12080779
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||||| ||| ||||||    
T  12080838 aaaaaataagtgggtgtgttctagcaaat-cctataggcatttgctagaatacacccactt 12080779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 453
Target Start/End: Original strand, 27597144 - 27597197
Alignment:
Q  400 atttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    ||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  27597144 atttgctagaacacacccacttgtttttttagaaggtgtgttatagcaacatac 27597197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 30688075 - 30687949
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  30688075 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttt 30687976  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  30687975 tctagaaggtgtgttatagcaacatac 30687949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 1951593 - 1951468
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||| |||||||         
T  1951593 tttttagttattcacttgctaaaatactccttttaaaaaataagtgggtgtattctaacatatgcctataggatttgctagaacacacccacttgtttct 1951494  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  1951493 ttagaaggtgtgttatagcaacatac 1951468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 328 - 452
Target Start/End: Original strand, 17605067 - 17605191
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||         
T  17605067 tttttagttatttacttgttaaaatactccttctaaaaaataagtgggtgtattccagcaaatgcctataggatttgctagaacacacccacttgttttt 17605166  T
Q  428 nnagaaggtgtgttatagcaacata 452  Q
      |||||||||||||||||||||||    
T  17605167 ttagaaggtgtgttatagcaacata 17605191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 15808997 - 15809123
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  15808997 tttttagttattaatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 15809096  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  15809097 tttagaaggtgtgttatagcaacatac 15809123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 33026254 - 33026379
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||         
T  33026254 tttttagttattaatttgctaaaatactccttctaaaaaataagtcggtgtattctagcaaatgcctataggatttgcttgaacacacccacttgttttt 33026353  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  33026354 ttagaaggtgtgttatagcaacatac 33026379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 33282282 - 33282407
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||         
T  33282282 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgcattctagcaaatgcctattggatttgctagaacacacccacttgttttt 33282381  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||| ||||||||    
T  33282382 ttagaaggtgtgttataacaacatac 33282407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 3960798 - 3960673
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| |||| ||||||          
T  3960798 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcatgtaggatttgctagagcacacccacttattttt 3960699  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  3960698 ttagaaggtgtgttatagcaacatac 3960673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 329 - 453
Target Start/End: Complemental strand, 29302264 - 29302139
Alignment:
Q  329 ttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnnn 427  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||||||          
T  29302264 ttttagttattcacttgttaaaatactccttctaaaaaataagcgggtgtattctagcaaatgcctataggatttgctagaacacactcacttgcttttt 29302165  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  29302164 ttagaaggtgtgttatagcaacatac 29302139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 37282208 - 37282330
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||   |||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||         
T  37282208 tttttagttattcacttgctaaaatactcct---aaaaaataagtgagtgtattttagcaaatgcctataggatttgctagaacacacccacttgttttt 37282304  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  37282305 ttagaaggtgtgttatagcaacatac 37282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 4736821 - 4736943
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| |||||||         
T  4736821 tttttagttattcacttgctaaaatactcct---aaaaaataagtggatgtattctagcaaatgcctataggatttgctataacacacccacttgttttt 4736917  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      |||| |||||||||||||||||||    
T  4736918 ttagaatgtgtgttatagcaacatac 4736943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 11448759 - 11448853
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  11448759 tttttagatattcacttgctaaaatactccttctaaaaactaagtggatgtatcctagcaaatgcctataggatttgctagaacacacccacttg 11448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 26905924 - 26906046
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||         
T  26905924 tttttagttattcatttgctaaaatactccta--aaaaaataagtggctgtattctagcaaatgcctataggatttgctagaacacacccacttg-tttt 26906020  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  26906021 ttagaaggtgtgttatagcaacatac 26906046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 17210034 - 17209911
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||| | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||         
T  17210034 ttttttagttattgatttgctaaaatactcct---aaaaaataagtgggtgtattctagcaaatgcctataggatttgcttgaacacacccacttatttt 17209938  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  17209937 tttagaaggtgtgttatagcaacatac 17209911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 27005240 - 27005155
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacac 413  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  27005240 tttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgtctaaaggatttgctagaacac 27005155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 1921486 - 1921572
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacaca 414  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||||||| | ||||||||||||||| |||||||||||||||    
T  1921486 tttttagttattcacttgctaaaatacttcttttaaaaactaagtgggtgtatccgagcaaatgcctataggatttgctagaacaca 1921572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 30667738 - 30667616
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||| || ||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||  |||||          
T  30667738 tttttaatttttcacttgctaaaatactcattctaaaaaatatgtg--tgtattctagcaaatgcctatagaatttgctagaacacactcactt-ttttt 30667642  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  30667641 ttagaaggtgtgttatagcaacatac 30667616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 33833214 - 33833088
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||  ||||| ||||| ||||||||| |||||||         
T  33833214 tttttagttattcactaactaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgtatataggatttgttagaacacacccacttgttttt 33833115  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  33833114 gttagaaggtgtgttatagcaacatac 33833088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 14795718 - 14795777
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagca 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14795718 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagca 14795777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 365 - 453
Target Start/End: Original strand, 38661242 - 38661330
Alignment:
Q  365 aaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||       ||||||||||||||||||||||||    
T  38661242 aaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgtttttttagaaggtgtgttatagcaacatac 38661330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 351 - 453
Target Start/End: Original strand, 37249351 - 37249454
Alignment:
Q  351 atactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnnnnnagaaggtgtgttatagcaac 449  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||        ||||||||||||||||||||    
T  37249351 atactccttttaaaaaataaatgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgctttttctagaaggtgtgttatagcaac 37249450  T
Q  450 atac 453  Q
    ||||    
T  37249451 atac 37249454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 1797439 - 1797498
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagca 387  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1797439 tttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagca 1797498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 390
Target Start/End: Original strand, 7014551 - 7014614
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaat 390  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  7014551 ttttttagttattcatttgctaaaatactcattctaaaaaataagtgggtgtgttctagcaaat 7014614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 25912201 - 25912123
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  25912201 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 25912123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 30486136 - 30486203
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgccta 395  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  30486136 tttttagttattcaattgctaaaatactcattctaaaaactaagtggatgtatcctagcaaatgccta 30486203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 31752139 - 31752217
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  31752139 tttttagttata-acttgctaaaacacaccttctaaaaaataaatgggtgtattctagcaaatgcctataggagttgcta 31752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 39548999 - 39548921
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  39548999 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatggctatagaagttgcta 39548921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 398
Target Start/End: Original strand, 17421717 - 17421786
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  17421717 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtctatag 17421786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 31240403 - 31240335
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  31240403 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctata 31240335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 17233061 - 17232997
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  17233061 ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 17232997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 4083761 - 4083839
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  4083761 tttttagttata-acttgttaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 4083839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 7944311 - 7944389
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  7944311 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 7944389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 14369790 - 14369868
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  14369790 tttttagttata-acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 14369868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 33696104 - 33696154
Alignment:
Q  357 cttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33696104 cttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 33696154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 12910152 - 12910103
Alignment:
Q  358 ttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  12910152 ttctaaaaaataagtgggtgtattctagcaaatgcctataggagttgcta 12910103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 28747784 - 28747863
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  ||||||||||| || | ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  28747784 ttttttagttata-acttgctaaaacacacattctaaaaattaagtgggtgtattctagcaaatgtctataggagttgcta 28747863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 3038910 - 3038988
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||| ||| ||||||||||||| | ||||||    
T  3038910 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtatcctaacaaatgcctataggagttgcta 3038988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 453
Target Start/End: Complemental strand, 17559335 - 17559259
Alignment:
Q  377 gtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    ||||||||||||||| |||||| |||||||| |||||| |||||||       ||||||||||||||||||||||||    
T  17559335 gtattctagcaaatgtctataggatttgctataacacacccacttgtttttttagaaggtgtgttatagcaacatac 17559259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 6261138 - 6261072
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||||| ||| |||||||||| |||||| | ||||||    
T  6261138 acttgctaaaacacaccttctaaaaaataagtgggtatatcctagcaaatgtctataggagttgcta 6261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 6436458 - 6436524
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||| |||| || ||||||||||||||||| | ||||||    
T  6436458 acttgctaaaacacaccttctaaaaaataagtaggtgaatcctagcaaatgcctataggagttgcta 6436524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 400
Target Start/End: Original strand, 9124724 - 9124797
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaa 400  Q
    ||||||||||||  ||||||||||| || | |||||||| ||||||||| |||||||||||||||||||||||||    
T  9124724 ttttttagttata-acttgctaaaacacacattctaaaaaaataagtggatgtattctagcaaatgcctatagaa 9124797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 1807474 - 1807543
Alignment:
Q  383 tagcaaatgcctatagaatttgctagaacacatccacttgnnnnnnnagaaggtgtgttatagcaacatac 453  Q
    |||||||||||||||||||||||| ||||||| |||||||       ||||||||||||||||||||||||    
T  1807474 tagcaaatgcctatagaatttgctggaacaca-ccacttgtttttttagaaggtgtgttatagcaacatac 1807543  T

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Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 4737955 - 4738019
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcc 393  Q
    |||||||||||  ||||||||||| || | ||||||||||||||||||||||| ||||||||||||    
T  4737955 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcc 4738019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 2528802 - 2528869
Alignment:
Q  341 acttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || |||||||||| ||||||||| |||||||||||||||| |||||| | ||||||    
T  2528802 acttgctaaaacacaccttctaaaaaaataagtggatgtattctagcaaatgtctataggagttgcta 2528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 13711180 - 13711113
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataa-gtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| |||| ||| |||||| || |||||||||||||||||||||||||||| | ||||||    
T  13711180 acttgctaaaacactcattcaaaaaaaaaaagtgggtgtattctagcaaatgcctataggagttgcta 13711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 17421835 - 17421757
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||  |||||||| ||||||||||| ||| ||||||    
T  17421835 ttgctaaaatactcattctaaaaaataagtgggtgtatgttag-aaactcctatagacatttgctagaatacacccactt 17421757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 4150985 - 4151055
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttct-aaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||||||||| |||||||||| || | ||||||||||| || ||||||||||| |||| ||||    
T  4150985 tttttagttattcacttgttaaaatactctttttaaaaaaataagttggagtattctagcatatgcatata 4151055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 10951090 - 10951156
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || |||| |||||||||||| |||||||| || ||||||||||||| | ||||||    
T  10951090 acttgctaaaacacaccttataaaaaataagtaggtgtattatatcaaatgcctataggagttgcta 10951156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 407
Target Start/End: Complemental strand, 17233403 - 17233353
Alignment:
Q  357 cttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||| |||| ||||||||||||||||||| | ||||||    
T  17233403 cttctaaaaaataagtgagtgtgttctagcaaatgcctataggagttgcta 17233353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 22701902 - 22701835
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || ||||| ||||| ||||||||||||||||||||||||| ||||    
T  22701902 tttttagttata-acttgctaaaacacaccttccaaaaa-taagtgggtgtattctagcaaatgcttata 22701835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 22800782 - 22800738
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    ||||| || |||| |||||||||||||||||||||||||||||||    
T  22800782 taaaacacaccttttaaaaaataagtgggtgtattctagcaaatg 22800738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 39038560 - 39038620
Alignment:
Q  347 taaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||| || ||||||||||||||||||||| ||| ||||||||||| ||||| | ||||||    
T  39038560 taaaacacaccttctaaaaaataagtgggtatatcctagcaaatgcatataggagttgcta 39038620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 2695254 - 2695177
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||  ||||||||| ||| ||||||||||||||||| | ||||||    
T  2695254 tttttagttata-acttgctaaaacacaccttctaaaatgtaagtgggt-tatcctagcaaatgcctataggagttgcta 2695177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 384
Target Start/End: Complemental strand, 13676283 - 13676229
Alignment:
Q  329 ttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattcta 384  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||||    
T  13676283 ttttagttat-cacatgctaaaatactccttttaaaaaataagtgtgtgaattcta 13676229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 26906041 - 26905963
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    |||||| || || |||||||||||| |||||||||| ||||||||||| |||||| | ||||||||||| ||| ||||||    
T  26906041 ttgctataacacaccttctaaaaaacaagtgggtgtgttctagcaaat-cctataggcatttgctagaatacagccactt 26905963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 38952230 - 38952273
Alignment:
Q  348 aaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||    
T  38952230 aaaacactccttataaaaaataagtgggtgtattttagcaaatg 38952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 40234216 - 40234169
Alignment:
Q  360 ctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  40234216 ctaaaacataagtgggtgtatcctagcaaatgcctataggagttgcta 40234169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 27005201 - 27005163
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  27005201 ataagtgggtgtattctaacaaatgtctaaaggatttgc 27005163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 421
Target Start/End: Complemental strand, 2528891 - 2528831
Alignment:
Q  361 taaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    ||||||||||||||||||||  |||||| | |||||||| ||||||||||| ||||||||||    
T  2528891 taaaaaataagtgggtgtatgttagcaact-cctatagacatttgctagaatacatccactt 2528831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 2695137 - 2695174
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  2695137 ttgctaaaacacaccttctaaaaaataagtgggtgtat 2695174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 10471015 - 10471079
Alignment:
Q  326 cttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 391  Q
    |||||||||||||  || |||||||| |||  |||||||| ||||||||||||||| |||||||||    
T  10471015 cttttttagttatg-acatgctaaaacactaattctaaaacataagtgggtgtattttagcaaatg 10471079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 14369908 - 14369871
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  14369908 ttgctaaaacacaccttctaaaaaataagtgggtgtat 14369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 25912083 - 25912120
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  25912083 ttgctaaaacacaccttctaaaaaataagtgggtgtat 25912120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Complemental strand, 32736401 - 32736364
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  32736401 ttgctaaaacacaccttctaaaaaataagtgggtgtat 32736364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 8410777 - 8410698
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctag 408  Q
    |||||||||||  ||||||||||| || | ||||||||||||||| | ||||| ||||||||||  ||||| | |||||||    
T  8410777 tttttagttata-acttgctaaaacacacattctaaaaaataagttgatgtatcctagcaaatgtttataggagttgctag 8410698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 28747904 - 28747825
Alignment:
Q  343 ttgctaaaatactccttctaaaaaa-taagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    ||||||||  ||||||||||||||| |||||||||||||  |||||| | |||||||| ||||||||||| ||| ||||||    
T  28747904 ttgctaaagcactccttctaaaaaaataagtgggtgtatgttagcaact-cctatagacatttgctagaatacacccactt 28747825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 33832739 - 33832818
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||| |||| ||||||||||||  ||||| ||||||||||||| | ||||||    
T  33832739 tttttagttata-acttgctaaaacacaccttccaaaacaataagtgggtgcgttctaacaaatgcctataggagttgcta 33832818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 39424426 - 39424301
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||          
T  39424426 tttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggatttgctagaacacacccacttattttt 39424327  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  39424326 ttagaaggtgtgttatagcaacatac 39424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 16960440 - 16960315
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||| |||||||         
T  16960440 tttttagttattcacttgctaaaatactccttctaaaaaataagtgagtgtattctagcaaatgcctatatgatttgctataacacacccacttgttttt 16960341  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  16960340 ttagaaggtgtgttatagcaacatac 16960315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 32716433 - 32716558
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||         
T  32716433 tttttagttattcacttactaaaatactccttcttaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacacccacttgttttt 32716532  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  32716533 ttagaaggtgtgttatagcaacatac 32716558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 20411355 - 20411229
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||         
T  20411355 tttttagttattcacttgctaagatactccttctaaaaaataagtgggtgtattctagcaaatgactataggatttgctagaacacacccacttgctttt 20411256  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  20411255 tctagaaggtgtgttatagcaacatac 20411229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 12864319 - 12864413
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  12864319 tttttagttattcacttgctaaaatactccttttaaaaaataagtgggtgtattctagcaaatgcctatatgatttgctagaacacacccacttg 12864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 14387558 - 14387472
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacaca 414  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14387558 tttttagttattcacttgccaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacaca 14387472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 14494527 - 14494433
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  14494527 tttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccacttg 14494433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 27389514 - 27389642
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag----aatttgctagaacacatccacttgn 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||| |||||||     
T  27389514 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggattgatttgctagaacacacccacttg- 27389612  T
Q  424 nnnnnnagaaggtgtgttatagcaacatac 453  Q
          ||||||||||||||||||||||||    
T  27389613 ttttttagaaggtgtgttatagcaacatac 27389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 52772404 - 52772310
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  52772404 tttttagttattcacttgctaaaatactccttctgaaaaataagtgggtgtattctagcaaatgcctataagatttgctagaacacacccacttg 52772310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 36817808 - 36817682
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||         
T  36817808 tttttagttattcacttgctaaaatactcattctaaaaaataagtgtgtgtattctagcaaattcctataggatttgctagaacacacccacttgttttt 36817709  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  36817708 tgtagaaggtgtgttatagcaacatac 36817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 328 - 453
Target Start/End: Original strand, 47130941 - 47131067
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaa-aataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||         
T  47130941 tttttagttattgatttgctaaaatactccttctaaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttatttt 47131040  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  47131041 tttagaaggtgtgttatagcaacatac 47131067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 1805015 - 1805136
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||         
T  1805015 tttttagttattgatttgctaaaatactccttctaaaagataagtgggtgtattctagcaaatgcctataggatttgctagaacacacccacttgttttt 1805114  T
Q  428 nnagaaggtgtgttatagcaac 449  Q
      | ||||||||||||||||||    
T  1805115 ttaaaaggtgtgttatagcaac 1805136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 13385761 - 13385854
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  13385761 tttttagttattcaattgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgcctataggatttgctagaacacacccactt 13385854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 27255810 - 27255716
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    |||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  27255810 tttttagttatttacttcctaaaatactccttttaaaaaataagagggtgtattctagcaaatgcctataggatttgctagaacacacccacttg 27255716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 51465048 - 51465172
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnn 426  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||  |||||||| ||||||||||||||        
T  51465048 ttttttagttattgatttgctaaaatactccttctaaaaaataagt-ggtgtattctagcaattgcctgtaagatttgctataacacatccacttgtttt 51465146  T
Q  427 nnnagaaggtgtgttatagcaacata 452  Q
       |||||||||||||||||||||||    
T  51465147 tttagaaggtgtgttatagcaacata 51465172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 43236320 - 43236238
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaa 410  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  43236320 tttttagttatccacttgctaaaatacttcttctaaaaaataagtgggtgtatcctagcaaatgcctataggatttgctagaa 43236238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 13943420 - 13943351
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13943420 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctata 13943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 32374566 - 32374660
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||  || |||||| |||||| |||||||| |||||| |||||||    
T  32374566 tttttagttattcacttgctaaaatactccttctacaaactaagtgggtgtatcgtaacaaatgtctataggatttgctataacacacccacttg 32374660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 453
Target Start/End: Original strand, 20201739 - 20201850
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnnnnnagaaggtgtgtt 441  Q
    ||||||||| || | || ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||        ||||||||||||    
T  20201739 ttgctaaaacacacattataaaaaataagtgggtgtattatagcaaatgtctataggatttgctagaacacacccacttgctttttctagaaggtgtgtt 20201838  T
Q  442 atagcaacatac 453  Q
    ||||||||||||    
T  20201839 atagcaacatac 20201850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 26843155 - 26843063
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||  ||||| ||||||    
T  26843155 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacacacacccactt 26843063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 463470 - 463392
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  463470 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 16005602 - 16005680
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  16005602 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 16005680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 28454755 - 28454821
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  28454755 acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 28454821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 10764635 - 10764704
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||||||||||||| || || ||||||||||||| |||||||||||||||| ||||| |||||    
T  10764635 tttttagttattcacttgctataacacaccttctaaaaaatgagtgggtgtattctagaaaatgtctata 10764704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 13264569 - 13264637
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  13264569 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctata 13264637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 32156033 - 32156084
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgc 392  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  32156033 acttgctaaaacactcattctaaaaaataagtgggtgtattctagcaaatgc 32156084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 34515288 - 34515210
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  34515288 tttttagttata-acttgctaaaacacaccttttaaaaaataagtgggtgtattctaacaaatgcctataggagttgcta 34515210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 36389616 - 36389538
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  36389616 tttttagttata-acttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 36389538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 51431898 - 51431953
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  51431898 ttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtctatag 51431953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 13157717 - 13157648
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||||| ||||||    
T  13157717 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgtctatag 13157648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 42199891 - 42199956
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcct 394  Q
    |||||||||||  |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  42199891 tttttagttata-acttgctaaaatacaccttctaaaaattaagtgtgtgtattctagcaaatgcct 42199956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 42208759 - 42208824
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcct 394  Q
    |||||||||||  |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  42208759 tttttagttata-acttgctaaaatacaccttctaaaaattaagtgtgtgtattctagcaaatgcct 42208824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 5491759 - 5491667
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||  ||||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | ||||||  | ||||||||||    
T  5491759 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgagtgtattctagtaaatgtctataggagttgctaacatacatccactt 5491667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 6192583 - 6192491
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||  ||||||| ||| || |||||||||| |||||||||||||||||||||||||| ||||| | ||||||  ||||| ||||||    
T  6192583 tttttagttata-acttgctgaaacacaccttctaaaatataagtgggtgtattctagcaaatgcatataggagttgctaacacacacccactt 6192491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 27348285 - 27348221
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgc 392  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  27348285 ttttttagttat-catttgctaaaatacttcttctaaaaaataagttggtgtattctaacaaatgc 27348221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 27787958 - 27787890
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||    
T  27787958 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaattcctata 27787890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 32152009 - 32151945
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  32152009 ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcatataggagttgcta 32151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 8643046 - 8643112
Alignment:
Q  341 acttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||| ||  ||||||||||||||||||||||||| |||||||||| ||||| | ||||||    
T  8643046 acttgctaaaacacatcttctaaaaaataagtgggtgtattatagcaaatgcgtataggagttgcta 8643112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 24770787 - 24770718
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||  ||||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||||    
T  24770787 tttttagttata-acttgctaaaacacaccttcaaaagaataagtgggtgtatcctagcaaatgcctatag 24770718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 28094458 - 28094507
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtg 377  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||    
T  28094458 tttttagttattcatttactaaaatactccttcttaaaaataagtgggtg 28094507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 3273369 - 3273448
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||  |||| |||||| || |||| ||||||||||||||||| |||||| ||||||||||||| | ||||||    
T  3273369 ttttttagttata-acttactaaaacacaccttttaaaaaataagtgggtgcattctaacaaatgcctataggagttgcta 3273448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 400
Target Start/End: Original strand, 24190766 - 24190840
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaa--ataagtgggtgtattctagcaaatgcctatagaa 400  Q
    |||||||||| |||||||| ||||||||||||||||||||  |||||| | | ||||||||||||||| |||||||    
T  24190766 ttttttagtt-ttcacttgataaaatactccttctaaaaaatataagtcgttctattctagcaaatgcatatagaa 24190840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 158572 - 158494
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||| |||||||||||||| ||| |||||||| ||||||| | ||||||    
T  158572 tttttagttata-acttgctaaaacacaccttctagaaaataagtgggtgaattatagcaaattcctataggagttgcta 158494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 407
Target Start/End: Complemental strand, 3979508 - 3979457
Alignment:
Q  356 ccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||||||||||||||| ||||||||| |||||| | ||||||    
T  3979508 ccttctaaaaaataagtgggtgtattatagcaaatgtctataggagttgcta 3979457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 50559407 - 50559329
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||| |||||||||||||| |||| ||| ||||||||||||| | ||||||    
T  50559407 tttttagttata-acttgctaaaacacaccttcaaaaaaataagtgggcgtatcctaacaaatgcctataggagttgcta 50559329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 32144135 - 32144081
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||||||||| ||||    
T  32144135 ttgctaaattacaccttctaaaaaataagtgggtgtatcccagcaaatgcatata 32144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 13157411 - 13157362
Alignment:
Q  358 ttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||||||||||| ||| |||||||||||||||| | ||||||    
T  13157411 ttctaaaaaataagtgggtgaattatagcaaatgcctataggagttgcta 13157362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 32152049 - 32151997
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacaca 414  Q
    ||||||||||||||||||| |||||||||| |||||| | |||||| ||||||    
T  32152049 aaaaaataagtgggtgtatcctagcaaatgtctataggagttgctaaaacaca 32151997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 41146288 - 41146355
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctat 396  Q
    |||||||||||  ||||||||||| || ||||| ||||||||||||||| ||| |||||||||| ||||    
T  41146288 tttttagttata-acttgctaaaacacaccttcaaaaaaataagtgggtatatcctagcaaatgtctat 41146355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 45818847 - 45818887
Alignment:
Q  357 cttctaaaaaataagtgggtgtattctagcaaatgcctata 397  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  45818847 cttctaaaaaataagtgggtgtattatagcaaatgtctata 45818887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 16073597 - 16073519
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | |||||||||||||||||||||||  || ||||||||| ||| | ||||||    
T  16073597 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtatcataacaaatgcctgtaggagttgcta 16073519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 32144177 - 32144130
Alignment:
Q  360 ctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    ||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  32144177 ctaaaaaataagtgggtgtatcctagcaaatgtctataggagttgcta 32144130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 4158266 - 4158173
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    ||||||||||||  || |||||||| || |||| |||||||||||||||||| | ||| ||||||| ||||| | ||||||  | ||||||||||    
T  4158266 ttttttagttata-acctgctaaaacacaccttttaaaaaataagtgggtgtttcctaacaaatgcttataggagttgctaacatacatccactt 4158173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 13157596 - 13157677
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg--cctataga-atttgctagaacacatccactt 421  Q
    ||||||||| || |||||||||||||||||||||||||  |||||| ||  |||||||| ||||||||| | ||| ||||||    
T  13157596 ttgctaaaacacaccttctaaaaaataagtgggtgtatgttagcaactgatcctatagacatttgctaggatacacccactt 13157677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 20201763 - 20201801
Alignment:
Q  252 ataagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  20201763 ataagtgggtgtattatagcaaatgtctataggatttgc 20201801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 34306601 - 34306519
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtg----tattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||  ||  |||||||||||||||||||||    ||||||||||||||||||||| | ||||||    
T  34306601 tttttagttata-acttgctaaagcacaacttctaaaaaataagtgggtgagtgtattctagcaaatgcctataggagttgcta 34306519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 24770669 - 24770706
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    |||||||||||  |||||||||||||||||||||||||    
T  24770669 ttgctaaaataaaccttctaaaaaataagtgggtgtat 24770706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 32374606 - 32374643
Alignment:
Q  253 taagtgggtgtattttaacaaatgtctataggatttgc 290  Q
    |||||||||||||  |||||||||||||||||||||||    
T  32374606 taagtgggtgtatcgtaacaaatgtctataggatttgc 32374643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 36389498 - 36389535
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtat 380  Q
    ||||||||| || |||||||||||||||||||||||||    
T  36389498 ttgctaaaacacaccttctaaaaaataagtgggtgtat 36389535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 47130834 - 47130797
Alignment:
Q  361 taaaaaataagtgggtgtattctagcaaatgcctatag 398  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  47130834 taaaaaataagtgggtgtatcctagcaaatgcccatag 47130797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 28094506 - 28094538
Alignment:
Q  390 tgcctatagaatttgctagaacacatccacttg 422  Q
    ||||||||| |||||||||||||||||||||||    
T  28094506 tgcctataggatttgctagaacacatccacttg 28094538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 47131042 - 47130983
Alignment:
Q  362 aaaaaataagtgggtgtattctagcaaatgcctata-gaatttgctagaacacatccactt 421  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||||| ||| ||||||    
T  47131042 aaaaaataagtgggtgtgttctagcaaat-cctataggcatttgctagaatacacccactt 47130983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 57931 - 58058
Alignment:
Q  327 ttttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnn 425  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||        
T  57931 ttttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggatttgctagaaaacaccaacttgcttt 58030  T
Q  426 nnnnagaaggtgtgttatagcaacatac 453  Q
        ||||||||||||||||||||||||    
T  58031 ttctagaaggtgtgttatagcaacatac 58058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 452526 - 452401
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttgnnnnn 427  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||  |||||          
T  452526 tttttagttatatacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaatgcctatacgatttgctagaacacacgcacttattttt 452427  T
Q  428 nnagaaggtgtgttatagcaacatac 453  Q
      ||||||||||||||||||||||||    
T  452426 ttagaaggtgtgttatagcaacatac 452401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 26212 - 26086
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccacttg-nnnn 426  Q
    |||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||         
T  26212 tttttagttatttatttgctaaaatactcattctaaaatataagtgggtgtattctagcaaatgcctataagatttgctagaacacacccacttgctttt 26113  T
Q  427 nnnagaaggtgtgttatagcaacatac 453  Q
       ||||||||||||||||||||||||    
T  26112 tctagaaggtgtgttatagcaacatac 26086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 9891 - 9813
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  9891 tttttagttata-acttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 9813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 5721 - 5799
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| || | |||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  5721 tttttagttata-acttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgtctataggagttgcta 5799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 5839 - 5761
Alignment:
Q  343 ttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataga-atttgctagaacacatccactt 421  Q
    ||||||||| || ||||||||||||||||||||||||   |||||| | |||||||| ||||||||||| ||| ||||||    
T  5839 ttgctaaaacacaccttctaaaaaataagtgggtgtaagttagcaact-cctatagacatttgctagaatacacccactt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 20778 - 20700
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  ||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  20778 tttttagttata-acttgctaaaacataccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgcta 20700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 6577 - 6655
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||||  |||||||||||||| ||||||||||||||| | | ||||| ||||||||||||||||| | ||||||    
T  6577 tttttagttata-acttgctaaaatacaccttctaaaaaataaatagatgtatcctagcaaatgcctataggagttgcta 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 4098 - 4189
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgctagaacacatccactt 421  Q
    |||||||||||  ||||||| ||| || |||||||||||||||||||||||||| |||||||||| ||||| | ||||||  | ||||||||||    
T  4098 tttttagttata-acttgctcaaacacaccttctaaaaaataagtgggtgtatt-tagcaaatgcttataggagttgctaacatacatccactt 4189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 22775 - 22714
Alignment:
Q  328 tttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 389  Q
    |||||| |||||||||| | |||  |||||||||||||||||||||||||||||||| ||||    
T  22775 tttttaattattcacttaccaaatgactccttctaaaaaataagtgggtgtattctaacaaa 22714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 615 - 680
Alignment:
Q  342 cttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctatagaatttgcta 407  Q
    |||||||||| |  |||||| |||||||||||||||||| |||| |||||||||||| | ||||||    
T  615 cttgctaaaacataccttctgaaaaataagtgggtgtatcctagaaaatgcctataggagttgcta 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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