View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5821-Insertion-4 (Length: 460)
Name: NF5821-Insertion-4
Description: NF5821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5821-Insertion-4 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 436; Significance: 0; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 7 - 450
Target Start/End: Complemental strand, 10979335 - 10978892
Alignment:
| Q |
7 |
caagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgac |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10979335 |
caagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtaac |
10979236 |
T |
 |
| Q |
107 |
gattgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979235 |
gattgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatg |
10979136 |
T |
 |
| Q |
207 |
gataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggag |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10979135 |
gataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtttacaagatccaccagtagaggatgttggag |
10979036 |
T |
 |
| Q |
307 |
atgattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatatc |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10979035 |
atgattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatatc |
10978936 |
T |
 |
| Q |
407 |
atattgttggtaccaagcattaatataagtagcagtttttatct |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10978935 |
atattgttggtaccaagcattaatataagtagcagtttttatct |
10978892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 7 - 437
Target Start/End: Complemental strand, 10903440 - 10903008
Alignment:
| Q |
7 |
caagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgac |
106 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
10903440 |
caagtagaaggaagaacttgaatgcattggccgaacaatctagccaaatttatttccctttttggatttatgatcgattacatgatggaagggaagtaac |
10903341 |
T |
 |
| Q |
107 |
gattgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatg |
206 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||| |
|
|
| T |
10903340 |
tattgaaaatgacacagatcaggaaatgaaattggcaaagaaaatgatgaccgtggctttgtggtgtatacaaacaaaacccgaggatcgtccttcaatg |
10903241 |
T |
 |
| Q |
207 |
gataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggag |
306 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| || || ||||||| |
|
|
| T |
10903240 |
gataaagttttggagatgcttgaaaaagaagatggggacttacaaattcctaataagccttacttttgtccacaagatccaccaacagcagacgttggag |
10903141 |
T |
 |
| Q |
307 |
atgattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatatc |
406 |
Q |
| |
|
||||| ||||||| |||||||||| ||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
10903140 |
atgataataatagcaactcatggacttcctatggtacatcaattagtgatcccaagggaccaacctaatctctttttggttcttggctgaattacatatc |
10903041 |
T |
 |
| Q |
407 |
atattgttggta--ccaagcattaatataagta |
437 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||| |
|
|
| T |
10903040 |
atattgttcgtaccccaagcattaatataagta |
10903008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 7 - 434
Target Start/End: Complemental strand, 10914600 - 10914171
Alignment:
| Q |
7 |
caagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgac |
106 |
Q |
| |
|
|||| ||||||| ||| ||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
10914600 |
caagcagaaggaagaatttgaatgcattggctgatcaatctagtgaaatttatttccctttttggatttatgatcgattacatgatggaagggaagtaac |
10914501 |
T |
 |
| Q |
107 |
gattgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatg |
206 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| || || |||||||||||| |
|
|
| T |
10914500 |
tattgaaaatgacacagatcaggaaatgaaattggcaaagaaaatgatgattgtagctttgtggtgtatacaaacaaaaccagaggatcgtccttcaatg |
10914401 |
T |
 |
| Q |
207 |
gataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggag |
306 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| || |||||||||| |
|
|
| T |
10914400 |
gaaaaagttttggagatgcttgaagaagaagatggagacttgcaaattcctaataagccttatttttgtccacaagatccaccaacagcagatgttggag |
10914301 |
T |
 |
| Q |
307 |
atgattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatat- |
405 |
Q |
| |
|
||||| || ||| || ||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
10914300 |
atgataattgtagcaattcatggacttcttatggtacatcagttagttatcccaagggaccaacctgatctctttctggttcttggttgaattacatttt |
10914201 |
T |
 |
| Q |
406 |
-catattgttggtaccaagcattaatataa |
434 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
10914200 |
agatattattggtaccaagcattaatataa |
10914171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 11 - 450
Target Start/End: Original strand, 11028710 - 11029145
Alignment:
| Q |
11 |
tagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtga--cga |
108 |
Q |
| |
|
|||||||| ||| | ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | | |
|
|
| T |
11028710 |
tagaaggaagaattagaatgcattggctgaacaatctagccaaatttatttccctttctggatttatgatcgattacatgatggaagggaagtatatcta |
11028809 |
T |
 |
| Q |
109 |
ttgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatgga |
208 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||| || || |||||||||||||| |
|
|
| T |
11028810 |
ttgaaaatgacacagatcaggaaatgaaattggcaaagaaaatgatgactgcggctttgtggtgtatacaaacaaaaccagaggatcgtccttcaatgga |
11028909 |
T |
 |
| Q |
209 |
taaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggagat |
308 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
11028910 |
taaagttttggagatgcttgaagaagaagatggagacttgcaaattcctaataagccttacttttgtccgcaagatccactagtagaggatgttggagtc |
11029009 |
T |
 |
| Q |
309 |
gattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatatcat |
408 |
Q |
| |
|
||| ||| ||| |||||||||| ||| ||||||||||||||||| ||| ||||| |||||| || || | || |||||| |||||||||||| |
|
|
| T |
11029010 |
gataatagtagcaactcatggacttcctatggtacatcagttagcgatcccaagtgaccaa-------tcagttagctttgtggttgtattacatatcat |
11029102 |
T |
 |
| Q |
409 |
attgttggtaccaagcattaatataagta-gcagtttttatct |
450 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11029103 |
attgttggtaccaagcattaatataagtatgcagtttttatct |
11029145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 118 - 448
Target Start/End: Complemental strand, 10932870 - 10932539
Alignment:
| Q |
118 |
acacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatggataaagtgtt |
217 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||| || |
|
|
| T |
10932870 |
acacagatcaggaaatgaaattggcaaagaaaatgatgatcgtggctttgtggtgtatacaaacaaatcccgaggatcgtccttcaatggaaaaagtttt |
10932771 |
T |
 |
| Q |
218 |
-ggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggagatgattataa |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || |
|
|
| T |
10932770 |
aggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtccacaagatccaccagtagaggatgttggagataatagtag |
10932671 |
T |
 |
| Q |
317 |
tagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatatcatattgttgg |
416 |
Q |
| |
|
||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
10932670 |
tagcaactcatggacttcctatggtacatcagttagtgatcccaagggaccaacctaatctctttttggttcttggttgaagtacatttaatattgttgg |
10932571 |
T |
 |
| Q |
417 |
taccaagcattaatataagtagcagtttttat |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
10932570 |
taccaagcattaatataagtagcagtttttat |
10932539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 7 - 428
Target Start/End: Complemental strand, 11010901 - 11010490
Alignment:
| Q |
7 |
caagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgac |
106 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||||| ||| ||||||||||| ||||| || |
|
|
| T |
11010901 |
caagtagaaggaagaacttgaatgcattggctgagcaatccagccaaatttattttcctttttggatttatgataaatttcatgatggaagtgaagtaac |
11010802 |
T |
 |
| Q |
107 |
gattgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatg |
206 |
Q |
| |
|
||||| || ||||||||||||||||| || | ||||||||||||||||||||||| || |||||||||||||||||||| || || |||||||||||| |
|
|
| T |
11010801 |
aattgagaacgacacagatcaggaaatgaagctagcaaagaaaatgatgattgtggcgttatggtgtatacagacaaaacctgatgatcgtccttcaatg |
11010702 |
T |
 |
| Q |
207 |
gataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggag |
306 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||| ||| |||||| |
|
|
| T |
11010701 |
gataaagttttggagatgcttgaagaagaagatggagacttgcagattcctaataagccttacttttgtccacaagattcaccaatagcggatgt----- |
11010607 |
T |
 |
| Q |
307 |
atgattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttcttggttgaattacatatc |
406 |
Q |
| |
|
||| | ||| |||||||||| ||| |||||||||||||||||| |||||||||||||| |||||||| |||||||||| | |||||||||||||| |
|
|
| T |
11010606 |
----ttacagtagcaactcatggacttccgatggtacatcagttagtggttccaagggaccaaactgatctc-ttttggttctcgtttgaattacatatc |
11010512 |
T |
 |
| Q |
407 |
atattgttggtaccaagcatta |
428 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
11010511 |
atattgttgtcaccaagcatta |
11010490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 7 - 389
Target Start/End: Original strand, 11005121 - 11005503
Alignment:
| Q |
7 |
caagtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgac |
106 |
Q |
| |
|
|||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||| ||||| || |
|
|
| T |
11005121 |
caagtagaaggaagaacttgaatccattggctgagcaatcttgccaaatttatttccctttttggatttatggtcagttacatgatggaagtgaagtaac |
11005220 |
T |
 |
| Q |
107 |
gattgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatg |
206 |
Q |
| |
|
||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| | || |||||||||||| |
|
|
| T |
11005221 |
aattgagaatgacacagatgaagaaatgaaattggcaaagaaaatgatgattgtggctttatggtgtatacagacaaaaccaggtgatcgtccttcaatg |
11005320 |
T |
 |
| Q |
207 |
gataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggag |
306 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| || |||||||| ||||| |||||| || ||| |
|
|
| T |
11005321 |
gataaagtgattgagatgcttgaagaagaagatggggatttgcaaatgcctaataagccttacctttatccacaagatctaccagctgaggattttagag |
11005420 |
T |
 |
| Q |
307 |
atgattataatagaaactcatggagttcgtatggtacatcagttagtgattccaagggaccaacctgatctctttttggttct |
389 |
Q |
| |
|
||| | ||| ||||| || ||| ||| | || ||||||| | | ||||| || || |||||||||||||| | |||||||| |
|
|
| T |
11005421 |
atggtaatactagaagttcttggtcttcctctgatacatcaataaatgatttcatggaaccaacctgatctcgtgttggttct |
11005503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 20 - 311
Target Start/End: Original strand, 10993818 - 10994109
Alignment:
| Q |
20 |
gaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgacgattgaaaatgac |
119 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||| || ||||| |||||| |
|
|
| T |
10993818 |
gaacttgaatgcattagctgagcaatctagccaaatttattttcctttttggatttatgatcagttacatgatggaagtgaagtaacaattgagaatgac |
10993917 |
T |
 |
| Q |
120 |
acagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatggataaagtgttgg |
219 |
Q |
| |
|
|||||| | ||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || ||||||||||||||||||||| | | |
|
|
| T |
10993918 |
acagatgaagaaatgaaattggcaaagaaaatgatgattgtggcattatggtgtattcagacaaaacctagtgatcgtccttcaatggataaagtgattg |
10994017 |
T |
 |
| Q |
220 |
agatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggagatgat |
311 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| || ||||||| ||||| ||| |||||| |||||||| |
|
|
| T |
10994018 |
agatgcttgaagaagaagatggggatttgcaaatgcctaataagccttacctttatccacaagatataccagcagacgatgttagagatgat |
10994109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 11033188 - 11032915
Alignment:
| Q |
11 |
tagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgacgatt |
110 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||||||||| | ||||||| ||||| |||||||||||| |||| ||| |
|
|
| T |
11033188 |
tagaaggaagaacttgaatgcattggctgatcaatcaagccagatttatttccctttttgggtttatgatcagttacaagatggaagggaaatgacaatt |
11033089 |
T |
 |
| Q |
111 |
gaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatggata |
210 |
Q |
| |
|
||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||| | ||||| || |||||| ||||||||| |
|
|
| T |
11033088 |
ctgaatgatacaaatcatgaaatgaaattggcaaagaaaatgatgatagtggctttgtggtgtattcaggcgaaacctagtgatcgtcctccaatggata |
11032989 |
T |
 |
| Q |
211 |
aagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagat |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||| || | |||||||| |
|
|
| T |
11032988 |
aagtgttggagatgcttgaagaagaagatgaagatttgcaaatgcctaataagcctgactattatgtacaagat |
11032915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 11007735 - 11007480
Alignment:
| Q |
11 |
tagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgacgatt |
110 |
Q |
| |
|
|||||||| ||||||| ||| | |||||| ||||||||||| ||||||||||||||||| | ||||||| ||||| |||||||| ||| | || ||| |
|
|
| T |
11007735 |
tagaaggaagaacttggatgtattggctggtcaatctagccaggtttatttccctttttgggtttatgatcagttacaagatggaagagaaataacaatt |
11007636 |
T |
 |
| Q |
111 |
gaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatggata |
210 |
Q |
| |
|
|| |||| ||| |||| || || ||||||||||||||||||||||| ||||||||||||||||| || | ||||| || |||||| ||||||||| |
|
|
| T |
11007635 |
gagaatgctacaaatcatgagatgaaattggcaaagaaaatgatgatagtggctttgtggtgtattcaagcgaaacctagtgatcgtcctccaatggata |
11007536 |
T |
 |
| Q |
211 |
aagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagcct |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||| |||||| ||||| |
|
|
| T |
11007535 |
aagtgttggagatgcttgaagaagaagatgaagatttgcaaatgcctaatcagcct |
11007480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 108 - 321
Target Start/End: Complemental strand, 10901563 - 10901350
Alignment:
| Q |
108 |
attgaaaatgacacagatcaggaaataaaattggcaaagaaaatgatgattgtggctttgtggtgtatacagacaaaacccgacgaccgtccttcaatgg |
207 |
Q |
| |
|
||||| |||||||||||| | ||||| |||||||||||||||| |||||||||||| || ||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
10901563 |
attgagaatgacacagatgaagaaatgaaattggcaaagaaaacgatgattgtggcattatggtgtactcagacaaaacctagtgatcgtccttcaatgg |
10901464 |
T |
 |
| Q |
208 |
ataaagtgttggagatgcttgaagaagaagatggggacttgcaaattcctaataagccttacttttgtctacaagatccaccagtagaggatgttggaga |
307 |
Q |
| |
|
|||||||| | |||||||||| | ||||||||||||| |||||||| ||||| ||||||||| ||| || |||||||| ||||| |||||| || |||| |
|
|
| T |
10901463 |
ataaagtgattgagatgcttgcataagaagatggggatttgcaaatgcctaagaagccttacctttatccacaagatctaccagctgaggatttttgaga |
10901364 |
T |
 |
| Q |
308 |
tgattataatagaa |
321 |
Q |
| |
|
|||| ||| ||||| |
|
|
| T |
10901363 |
tgataatactagaa |
10901350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 10974255 - 10974142
Alignment:
| Q |
9 |
agtagaaggaggaacttgaatgcaatggctgagcaatctagccaaatttatttccctttttggatatatgatcgattacatgatggaagggaagtgacga |
108 |
Q |
| |
|
|||||||||| ||| ||||||||| |||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | | |
|
|
| T |
10974255 |
agtagaaggaagaatttgaatgcattggccgatcaatctagccaaatttatttccctttctggatttatgatcgattacatgatggaagggaagtatcta |
10974156 |
T |
 |
| Q |
109 |
ttgaaaatgacaca |
122 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10974155 |
ttgaaaatgacaca |
10974142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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