View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5822-Insertion-4 (Length: 662)
Name: NF5822-Insertion-4
Description: NF5822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5822-Insertion-4 |
 | |
|
| [»] chr7 (3 HSPs) |
| |
|
| [»] chr5 (2 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 575; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 19 - 662
Target Start/End: Complemental strand, 14745045 - 14744402
Alignment:
| Q |
19 |
atatttgcacttcacagtgtataatgttacaaatgatattcgagcacagggatatcaatcatgagaagaataatgaacaaagcgccactgatcccaacga |
118 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14745045 |
atatttgcacttcacaatgtataatgttacaaatgatattcgagcacagggatatcaatcatgagaagaataatgaacaaagcgccactgatcccaacgg |
14744946 |
T |
|
| Q |
119 |
taatagagaaacattaaaagtggtcgcccaatttatcactgaagccgaacttgttcagaggcggacctaggtggcgacatgggaggaccatggcctcccc |
218 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14744945 |
taatatagaaacattaaaagtggtcgcccaatctatcactgaagttgaacttgttcggaggcggacctaggtggagacatgggaggaccatggcctcccc |
14744846 |
T |
|
| Q |
219 |
aaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttacattatacgtcactcgtttac |
318 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
14744845 |
aaagtctcaaaaacttcatttttaacaggtatataaacatatttttacctaaatgttatgttatatattgtaacgtttacgttatacgtcacttgtttac |
14744746 |
T |
|
| Q |
319 |
actccagcacagtggtaatgcatctcgcctttgagctttaggttgcttatttgatccttgattcgtccatttttatcctttcactagtgttttttgcatt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14744745 |
actccagcacagtggtaatgcatctcgcctttgagctttaggttgcttatttgatccttgattcgtccatttttatcctttcactagtgttttttgcatt |
14744646 |
T |
|
| Q |
419 |
tttaaacaaaagatgcgatgaaaatattgcacaatgcaagtattgaaccatgattagggttgcaaaatacaaacatcccaaccacttgacctacaccttt |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14744645 |
tttaaacaaaagatgcgatgaaaatattgcacaatgcaagtattgaaccatgattagggttgcaaaatacaaacatcccaaccacttgacctacaccttt |
14744546 |
T |
|
| Q |
519 |
agattttaattattttgatagattaaacatatatcttaaaattatggccccttcatnnnnnnnttattggctccgccattaaacttgttgaggaaaacat |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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|
| T |
14744545 |
agattttaattattttgatagattaaacatatatcttaaaattatggccccttcataaaataattattggctccgccattaaacttgttgaggaaaacat |
14744446 |
T |
|
| Q |
619 |
ggtcgaaaaaataaatgataaaaagtcgatgtagcacccttttg |
662 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14744445 |
ggtcgaaaaaataaatgataaaaagtcgatgtagcacccttttg |
14744402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 29099228 - 29099318
Alignment:
| Q |
207 |
catggcctccccaaagtctcaaaaacttct-tttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgttt |
296 |
Q |
| |
|
||||||||||||||||| | ||||| ||| ||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
29099228 |
catggcctccccaaagtttaaaaaaattccatttttaataggtatatagacacatttttaactaaatgttatgttatatatattaacgttt |
29099318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 41808764 - 41808841
Alignment:
| Q |
208 |
atggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatata |
285 |
Q |
| |
|
||||||||| |||||||||||| ||| ||||||| |||||| || | ||||||||||||||| ||||| ||||||| |
|
|
| T |
41808764 |
atggcctcctcaaagtctcaaagttttcatttttaataggtatgtatatacatttttacctaaaagttatattatata |
41808841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 494; Significance: 0; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 19 - 662
Target Start/End: Original strand, 17582291 - 17582918
Alignment:
| Q |
19 |
atatttgcacttcacagtgtataatgttacaaatgatattcgagcacagggatatcaatcatgagaagaataatgaacaaagcgccactgatcccaacga |
118 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17582291 |
atatttgcacttcacaatgtataatgttacaaatgatattcgagcacagggatatcaatcatgagaagaataatgaacaaagcgccactgatcccaacag |
17582390 |
T |
|
| Q |
119 |
taatagagaaacattaaaagtggtcgcccaatttatcactgaagccgaacttgttcagaggcggacctaggtggcgacatgggaggaccatggcctcccc |
218 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17582391 |
taatatagaaacattaaaagtggtcgcccaatctatcactaaagccgaacttgttcagaggtggacctaggtggagacatgggaggaccatggcctcccc |
17582490 |
T |
|
| Q |
219 |
aaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttacattatacgtcactcgtttac |
318 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17582491 |
aaagtctcaaaaacttcatttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttacattatacatcactcgtttac |
17582590 |
T |
|
| Q |
319 |
actccagcacagtggtaatgcatctcgcctttgagctttaggttgcttatttgatccttgattcgtccatttttatcctttcactagtgttttttgcatt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17582591 |
actccagcacagtggtaatgcatctcgcctttgagctttaggttgcttctttgatccttgattcgtccacttttatcctttcactagtgttttttgcatt |
17582690 |
T |
|
| Q |
419 |
tttaaacaaaagatgcgatgaaaatattgcacaatgcaagtattgaaccatgattagg---gttgcaaaatacaaacatcccaaccacttgacctacacc |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17582691 |
tttaaacaaaagatgcgatgaaaatattgcacaatgcaagtattgaaccatgattagggttgttgcaaaatacaaacatcccaaccacttgacctacacc |
17582790 |
T |
|
| Q |
516 |
tttagattttaattattttgatagattaaacatatatcttaaaattatggccccttcatnnnnnnnttattggctccgccattaaacttgttgaggaaaa |
615 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
17582791 |
tt-------------------tagattaaacatatatctaaaaattatggccccttcataaaaaaattattggctccgccattaaacttgttgaggaaaa |
17582871 |
T |
|
| Q |
616 |
catggtcgaaaaaataaatgataaaaagtcgatgtagcacccttttg |
662 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17582872 |
catggtcgaaaaaataaatgataaaaagtcgatgtagcgcccttttg |
17582918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 199 - 574
Target Start/End: Complemental strand, 34515580 - 34515205
Alignment:
| Q |
199 |
gggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttac |
298 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| ||| |||||| || |||||||||||||||| | |||| |||||| |||||||| |||||||||| |
|
|
| T |
34515580 |
gggagggccagggcctccccaaagtctcaaaaatttcatttttagtagatatataaacacatttt-atctaattgttatattatatatactaacgtttac |
34515482 |
T |
|
| Q |
299 |
attatacgtcactcgtttacactccagcacagtggtaatgcatctcgcctttgagctttaggttgcttatttgatccttga-ttcgtccatttttatcct |
397 |
Q |
| |
|
|| | | || || | | | ||| || ||||||| ||||| ||| | | | |||||||||| | | | |||||| | || | |||||||| ||| |
|
|
| T |
34515481 |
ataacatatccatcatatgtagtccggcgcagtggtcatgcaactcacatataagctttaggtcgtgtgtccgatcctccagtttggtcatttttagcct |
34515382 |
T |
|
| Q |
398 |
ttcactagtgttttttgcatttttaaacaaaagatgcgatgaaaatattgcacaatgcaagtattgaaccatgattagggttgcaaaatacaaacatccc |
497 |
Q |
| |
|
||| ||| ||||||| ||||||| |||||| |||| |||||||| || | | |||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
34515381 |
atcagcagtattttttgtatttttatacaaaaaatgccatgaaaatgctgtaaattgcaagtattgaaccatggtttgggttgcaaaatacaaacatcca |
34515282 |
T |
|
| Q |
498 |
aaccacttgacctacacctttagattttaattattttgatagattaaacatatatcttaaaattatggccccttcat |
574 |
Q |
| |
|
||||||||||| | | || |||||| |||||| ||| | |||||| |||||| |||||||||||||||| |||| |
|
|
| T |
34515281 |
aaccacttgacatgtagctgtagattaaaattatagtgacatattaaatatatattttaaaattatggccccctcat |
34515205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 177 - 363
Target Start/End: Complemental strand, 51766732 - 51766548
Alignment:
| Q |
177 |
aggcggacctaggtggcgacatgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgtta |
276 |
Q |
| |
|
||||||| |||||||| || | |||| | ||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
51766732 |
aggcggagctaggtggggaaaggggatggtcatggcctccccaaagtctcaaaaatttcatttttaataggtata--aacacatttttagctaaatgtta |
51766635 |
T |
|
| Q |
277 |
tgttatatattgtaacgtttacattatacgtcactcgtttacactccagcacagtggtaatgcatctcgcctttgagctttaggttg |
363 |
Q |
| |
|
| |||||||| |||| |||||||| ||| |||| | |||||| |||||||||| ||||| ||||||||||||||||||| ||||| |
|
|
| T |
51766634 |
tattatatatagtaatgtttacatcataagtcatacatttacagtccagcacagcagtaatccatctcgcctttgagcttttggttg |
51766548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 51766495 - 51766400
Alignment:
| Q |
479 |
tgcaaaatacaaacatcccaaccacttgacctacacctttagattttaattattttgatagattaaacatatatcttaaaattatggccccttcat |
574 |
Q |
| |
|
||||| |||||||||||||| ||| |||||||| ||||||||| |||||| | ||| | |||||| |||||| ||||||||||||| |||||| |
|
|
| T |
51766495 |
tgcaatatacaaacatcccagccatttgacctagggctttagattgtaattactgtgacatattaaatatatatagtaaaattatggcctcttcat |
51766400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 50731540 - 50731448
Alignment:
| Q |
194 |
gacatgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatat |
286 |
Q |
| |
|
||||||||||| ||||| |||||| | ||||||||| || ||||||| |||||| || | ||||||||||||||| ||||| |||||||| |
|
|
| T |
50731540 |
gacatgggagggccatgacctcccgagagtctcaaagtttttatttttaataggtatgtatatacatttttacctaaaagttatattatatat |
50731448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 50781314 - 50781406
Alignment:
| Q |
194 |
gacatgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatat |
286 |
Q |
| |
|
||||||||||| ||||| |||||| | ||||||||| || ||||||| |||||| || | ||||||||||||||| ||||| |||||||| |
|
|
| T |
50781314 |
gacatgggagggccatgacctcccgagagtctcaaagtttttatttttaataggtatgtatatacatttttacctaaaagttatattatatat |
50781406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 46173746 - 46173614
Alignment:
| Q |
172 |
ttcagaggcggacctaggtggcgacatgggaggaccatggcctccccaaagtctc-aaaaacttcttttttaacagg--tatataaacacatttttacct |
268 |
Q |
| |
|
|||||||||||| |||||||| ||| |||| ||||||||| |||||||| |||| ||||| || ||||||| ||| |||||||||||| |||||||| |
|
|
| T |
46173746 |
ttcagaggcggatctaggtggggactggggatgaccatggcgtccccaaaatctcaaaaaaaatcatttttaataggtatatataaacaca-ttttacct |
46173648 |
T |
|
| Q |
269 |
aaatgttatgttatatattgtaacgtttacatta |
302 |
Q |
| |
|
|||| |||| |||||||| || ||| |||||||| |
|
|
| T |
46173647 |
aaatattatattatatatagtgacgcttacatta |
46173614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 47476421 - 47476372
Alignment:
| Q |
237 |
tttttaacaggtatataaacacatttttacctaaatgttatgttatatat |
286 |
Q |
| |
|
||||||| ||||||||| ||||||||||| |||||| ||||||| ||||| |
|
|
| T |
47476421 |
tttttaataggtatatatacacatttttaactaaatattatgttgtatat |
47476372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 304
Target Start/End: Complemental strand, 36148876 - 36148779
Alignment:
| Q |
207 |
catggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttacattata |
304 |
Q |
| |
|
||||||||||||||||| | ||||| | ||||||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
36148876 |
catggcctccccaaagtttaaaaaaaaacatttttaataggtatatatacacagttttaattaaatgttatgttatatatattaacgtttgcattata |
36148779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 36264863 - 36264775
Alignment:
| Q |
196 |
catgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatat |
284 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||| || ||||||| ||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
36264863 |
catgggagggtcatggcctccccaaagtatccaaaattttatttttaataggtatatattaacatttttagctaaatgttatgttatat |
36264775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 662
Target Start/End: Original strand, 22829745 - 22829796
Alignment:
| Q |
611 |
gaaaacatggtcgaaaaaataaatgataaaaagtcgatgtagcacccttttg |
662 |
Q |
| |
|
||||||||||| |||||||||||||| |||| |||||| |||||||||||| |
|
|
| T |
22829745 |
gaaaacatggttaaaaaaataaatgatgaaaaatcgatgcagcacccttttg |
22829796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 40877754 - 40877801
Alignment:
| Q |
237 |
tttttaacaggtatataaacacatttttacctaaatgttatgttatat |
284 |
Q |
| |
|
||||||| || |||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
40877754 |
tttttaatagttatatatacacatttttagctaaatgttatgttatat |
40877801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 10675154 - 10675054
Alignment:
| Q |
227 |
aaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttacattatacgtcactcgtttacactccagc |
326 |
Q |
| |
|
||||| ||| ||||||| |||| || | ||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||| ||||||||| ||| |
|
|
| T |
10675154 |
aaaaaattcatttttaataggtgtaaatacacatttttaactaaatgttatgttatatatattaacgtttgcattataagtcacgtctttacactctagc |
10675055 |
T |
|
| Q |
327 |
a |
327 |
Q |
| |
|
| |
|
|
| T |
10675054 |
a |
10675054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 12145892 - 12145962
Alignment:
| Q |
207 |
catggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttat |
277 |
Q |
| |
|
|||||| |||||||||| | ||||| ||| ||||||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
12145892 |
catggcatccccaaagttttaaaaaattcatttttaataggtatatatacacatttttaattaaatgttat |
12145962 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 7076494 - 7076407
Alignment:
| Q |
174 |
cagaggcggacctaggtggcgacatgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacattt |
262 |
Q |
| |
|
|||||||||| |||||||| ||| || ||| ||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||| |
|
|
| T |
7076494 |
cagaggcggagctaggtgg-gactgggaagggacatggcctccccaaagtctcaaaaatttcatttttaacatgtacataaacacattt |
7076407 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 26141926 - 26142017
Alignment:
| Q |
195 |
acatgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatat |
286 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||| | ||| |||||| ||||||||| ||||||||| || |||||||||||||||| |
|
|
| T |
26141926 |
acatgggagggccatggcctcccgaaagtctcaaacatttcaattttaataggtatatactgacatttttagttatatgttatgttatatat |
26142017 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 44278818 - 44278756
Alignment:
| Q |
240 |
ttaacaggtatataaacacatttttacctaaatgttatgttatatattgtaacgtttacatta |
302 |
Q |
| |
|
|||| ||||||||||| ||||||||| ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
44278818 |
ttaataggtatataaatacatttttaactaaatgttatattatatatattaacgtttgcatta |
44278756 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 32573463 - 32573539
Alignment:
| Q |
208 |
atggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatat |
286 |
Q |
| |
|
|||||||||| ||||||||||||| ||| ||||||| | |||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
32573463 |
atggcctccctaaagtctcaaaaatttcatttttaata--tatatatcgacattttgagctaaatgttatgttatatat |
32573539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 26001843 - 26001934
Alignment:
| Q |
194 |
gacatgggaggaccatggcctccccaaagtctcaaaaacttcttttttaacaggtatataaacacatttttacctaaatgttatgttatatat |
286 |
Q |
| |
|
|||||| || |||||| || ||||||| ||||||||| ||| | ||||| ||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
26001843 |
gacatgagatgaccatcgctcccccaaaatctcaaaaatttcatatttaataggtatatattgacatttt-agctaaatgttatgttatatat |
26001934 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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