View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5822_high_22 (Length: 238)
Name: NF5822_high_22
Description: NF5822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5822_high_22 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 13911428 - 13911208
Alignment:
| Q |
18 |
ggacttaccttaaaatacaaaatctcggatattatcactgcttttgtttatgtggatgtaatgctcttgccgttgtgttaattagagacactattaagtg |
117 |
Q |
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| T |
13911428 |
ggacttagcttaaaatacaaaatctcggatattatcactgcttttgtttatgtggatgtaatgctcttgccgttgtgttaattagagatactattaagtg |
13911329 |
T |
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| Q |
118 |
ttaatgcttctttaatttgtctcacattaatggaaccacacatgtgaaatctagttgcaccaaatgcaagaggggaaccacccacaaaaaatcttgtcga |
217 |
Q |
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| T |
13911328 |
ttaatgcttctttaatttgtctcacattaatggaaccacacatgtgaaatctagttgcaccaaatgcaagaggggaaccacccacaaaaaatcttgtcga |
13911229 |
T |
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| Q |
218 |
cagttagcatatatatcaaac |
238 |
Q |
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| T |
13911228 |
cagttagcatatatatcaaac |
13911208 |
T |
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