View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5822_high_4 (Length: 513)

Name: NF5822_high_4
Description: NF5822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5822_high_4
NF5822_high_4
[»] chr8 (14 HSPs)
chr8 (21-502)||(12754001-12754483)
chr8 (374-466)||(45521178-45521270)
chr8 (381-459)||(30903352-30903430)
chr8 (374-435)||(11298275-11298336)
chr8 (386-448)||(583840-583902)
chr8 (374-448)||(44893286-44893360)
chr8 (399-464)||(20240581-20240647)
chr8 (399-464)||(20252420-20252486)
chr8 (376-465)||(10535414-10535503)
chr8 (371-448)||(10927634-10927711)
chr8 (374-435)||(11785956-11786017)
chr8 (374-434)||(15884564-15884624)
chr8 (376-448)||(23895596-23895668)
chr8 (386-465)||(35496275-35496355)
[»] scaffold0223 (1 HSPs)
scaffold0223 (371-449)||(16905-16983)
[»] chr2 (21 HSPs)
chr2 (374-448)||(10669616-10669690)
chr2 (374-448)||(18902538-18902612)
chr2 (374-448)||(34346295-34346369)
chr2 (371-448)||(33005775-33005852)
chr2 (374-448)||(16034961-16035035)
chr2 (386-448)||(34722704-34722766)
chr2 (374-448)||(37560197-37560271)
chr2 (374-466)||(12455315-12455408)
chr2 (371-448)||(15234066-15234143)
chr2 (375-464)||(31088342-31088431)
chr2 (381-449)||(3848929-3848997)
chr2 (376-448)||(34356230-34356302)
chr2 (375-450)||(5035310-5035385)
chr2 (389-448)||(45263690-45263749)
chr2 (374-436)||(2784968-2785030)
chr2 (374-448)||(10823084-10823158)
chr2 (374-448)||(25540412-25540486)
chr2 (378-432)||(29697563-29697617)
chr2 (374-452)||(44773283-44773361)
chr2 (371-448)||(42770656-42770733)
chr2 (377-445)||(19976818-19976886)
[»] chr1 (13 HSPs)
chr1 (376-445)||(34719804-34719873)
chr1 (372-448)||(15465990-15466066)
chr1 (374-452)||(5504052-5504130)
chr1 (390-448)||(18649377-18649435)
chr1 (374-428)||(38859125-38859179)
chr1 (371-448)||(10336541-10336618)
chr1 (375-448)||(16956491-16956564)
chr1 (374-449)||(14357779-14357854)
chr1 (374-452)||(2567297-2567375)
chr1 (371-441)||(41696604-41696674)
chr1 (371-448)||(5855547-5855624)
chr1 (371-448)||(32142852-32142929)
chr1 (375-447)||(33418125-33418197)
[»] chr3 (16 HSPs)
chr3 (374-466)||(24506657-24506749)
chr3 (374-449)||(50405612-50405687)
chr3 (371-466)||(29127924-29128020)
chr3 (376-448)||(30045845-30045917)
chr3 (371-465)||(4638160-4638255)
chr3 (374-448)||(3507542-3507616)
chr3 (374-448)||(26361976-26362050)
chr3 (374-448)||(55069688-55069762)
chr3 (390-459)||(35998596-35998665)
chr3 (374-434)||(10043720-10043780)
chr3 (374-446)||(23511593-23511665)
chr3 (374-448)||(26043836-26043910)
chr3 (378-448)||(52364813-52364883)
chr3 (372-429)||(31138102-31138159)
chr3 (374-459)||(45450456-45450541)
chr3 (389-449)||(43330756-43330816)
[»] chr5 (15 HSPs)
chr5 (377-448)||(24875370-24875441)
chr5 (374-447)||(14728109-14728182)
chr5 (371-448)||(19839352-19839429)
chr5 (377-448)||(41801002-41801073)
chr5 (371-433)||(2485236-2485298)
chr5 (374-448)||(13664285-13664359)
chr5 (376-448)||(20255394-20255466)
chr5 (388-448)||(26077166-26077226)
chr5 (375-466)||(38897728-38897819)
chr5 (399-453)||(7336640-7336694)
chr5 (386-448)||(23247371-23247433)
chr5 (371-417)||(38296735-38296781)
chr5 (374-448)||(42086352-42086426)
chr5 (401-466)||(24498989-24499054)
chr5 (371-466)||(15034081-15034177)
[»] chr4 (20 HSPs)
chr4 (374-448)||(3159477-3159551)
chr4 (374-466)||(10541026-10541118)
chr4 (374-442)||(14858745-14858813)
chr4 (374-449)||(36145223-36145298)
chr4 (374-448)||(38166056-38166130)
chr4 (374-448)||(55921063-55921137)
chr4 (371-448)||(8424583-8424660)
chr4 (374-435)||(21192682-21192743)
chr4 (374-502)||(43458587-43458716)
chr4 (376-440)||(14859328-14859392)
chr4 (374-449)||(24166478-24166553)
chr4 (391-464)||(3574471-3574545)
chr4 (374-448)||(7246654-7246728)
chr4 (374-448)||(40780869-40780943)
chr4 (376-449)||(5472858-5472931)
chr4 (374-435)||(21429343-21429404)
chr4 (371-436)||(31635752-31635817)
chr4 (375-448)||(36262776-36262849)
chr4 (375-448)||(47078487-47078560)
chr4 (371-435)||(31588728-31588792)
[»] chr6 (9 HSPs)
chr6 (376-448)||(10311479-10311551)
chr6 (374-448)||(9633633-9633707)
chr6 (374-448)||(5253231-5253305)
chr6 (374-448)||(30788861-30788935)
chr6 (375-448)||(2271312-2271385)
chr6 (371-448)||(30410473-30410550)
chr6 (376-448)||(5029845-5029917)
chr6 (374-434)||(8932703-8932763)
chr6 (374-434)||(8944169-8944229)
[»] scaffold0209 (1 HSPs)
scaffold0209 (386-448)||(12600-12662)
[»] scaffold0002 (1 HSPs)
scaffold0002 (374-448)||(597-671)
[»] chr7 (18 HSPs)
chr7 (374-448)||(21530775-21530849)
chr7 (374-448)||(37514948-37515022)
chr7 (371-445)||(41267929-41268003)
chr7 (371-451)||(42210267-42210347)
chr7 (374-448)||(8734694-8734768)
chr7 (374-448)||(13095885-13095959)
chr7 (386-448)||(19914723-19914785)
chr7 (374-448)||(34659253-34659327)
chr7 (374-448)||(38578875-38578949)
chr7 (399-464)||(44336903-44336969)
chr7 (374-448)||(45960011-45960085)
chr7 (371-448)||(17748387-17748464)
chr7 (375-448)||(29805449-29805522)
chr7 (419-464)||(48224784-48224829)
chr7 (374-466)||(24969334-24969425)
chr7 (371-466)||(29151948-29152044)
chr7 (398-450)||(34865909-34865961)
chr7 (377-445)||(41945503-41945571)
[»] scaffold0291 (1 HSPs)
scaffold0291 (374-448)||(6882-6956)
[»] scaffold0029 (1 HSPs)
scaffold0029 (374-448)||(41071-41145)
[»] scaffold0005 (1 HSPs)
scaffold0005 (411-448)||(271119-271156)


Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 21 - 502
Target Start/End: Complemental strand, 12754483 - 12754001
Alignment:
Q  21 actgcaaacagagtaaacaaacgaaataatgaaattaatccaatgaaggaacagtgaatcgtaatgccttgtctggaggggaccactgagcgtgctgagt 120  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12754483 actgcaaacagagtaaacaaaccaaataatgaaattaatccaatgaaggaacagtgaatcgtaatgccttgtctggaggggaccactgagcgtgctgagt 12754384  T
Q  121 tgtttcaatgcctttaaaataaaaattggatgacatagttgcacgaagtgtgtt--ta-ttacttgttactctttctctgatatttctgcctttaatttc 217  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||    
T  12754383 tgtttcaatgcctttaaaataaaaatcggatgacatagttgcacgaagtgtgttgttacttacttgttaccctttctctgatatttctgcctttaatttc 12754284  T
Q  218 gtgctcacacacatttttattttccggtttgggtggagaaaagtctttggaatattgtacagaaaaagagtatttggaatattcttccgtcattatttta 317  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12754283 gtgcacacacacatttttattttccggtttgggtggagaaaagtctttggaatattgtacaaaaaaagagtatttggaatattcttccgtcattatttta 12754184  T
Q  318 tggtgacttatggagtagggcacatatgttttgtannnnnnnnnnnnnnnnnncatcggtttccgactcatcaaaggtgagcgattaatctgactcgtgc 417  Q
    ||||||||||||||| |||||||| ||||||||||                  | |||||||||||  |||||||| ||||||| |||||||||| ||||    
T  12754183 tggtgacttatggaggagggcacacatgttttgtatttttttttcttttttcacgtcggtttccgatccatcaaagatgagcgactaatctgacttgtgc 12754084  T
Q  418 atagagacatgcgcactgatcaagcgttgttttcctggaaattgaaccctattccccaaatatacatctttggaatgagcttctt 502  Q
    |||||| ||||||||||| || |  ||||||   |||| ||| |||| | |||| ||||||||   |||||||||||||||||||    
T  12754083 atagaggcatgcgcactggtctaatgttgttcctctgggaatggaactcgattctccaaatat--gtctttggaatgagcttctt 12754001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 45521270 - 45521178
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaaccc 466  Q
    ||||||||||| |||||||||||||||| ||||| | ||| ||| ||||| ||||||||||||||||| ||||||  ||||| ||| ||||||    
T  45521270 cggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaaccc 45521178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 459
Target Start/End: Complemental strand, 30903430 - 30903352
Alignment:
Q  381 cgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaat 459  Q
    |||||||||||||| ||||||||||||||||| |||  ||| | ||||||||||| |||||| |||||| |||| ||||    
T  30903430 cgactcatcaaaggcgagcgattaatctgacttgtgtgtagcggcatgcgcactggtcaagcattgtttccctgaaaat 30903352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 11298275 - 11298336
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactg 435  Q
    ||||||||||| || |||||||||||||||||| || ||| ||||||||| |||||||||||    
T  11298275 cggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactg 11298336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 583902 - 583840
Alignment:
Q  386 catcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| |||| ||||| ||||| ||| ||||| ||||||||||| ||||||||||||    
T  583902 catcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt 583840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 44893286 - 44893360
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| |||||| ||||||||||||||| | ||||||| ||||| ||||| |||||  ||||| |||||    
T  44893286 cggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgtt 44893360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 20240647 - 20240581
Alignment:
Q  399 cgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt-gttttcctggaaattgaac 464  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||| ||||  ||||||||||||| ||||    
T  20240647 cgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 20240581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 20252420 - 20252486
Alignment:
Q  399 cgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt-gttttcctggaaattgaac 464  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||| ||||  ||||||||||||| ||||    
T  20252420 cgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 20252486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 465
Target Start/End: Original strand, 10535414 - 10535503
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaacc 465  Q
    |||||||||| | ||||||||| ||| ||||  | ||| ||| | ||||||||||||||| ||||||| ||||  |||| ||||||||||    
T  10535414 gtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactggtcaagcggtgttcccctgaaaattgaacc 10535503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 10927711 - 10927634
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| ||  |||||||| ||| ||||| | ||| ||| ||||| |||||||||||  |||||||||||    
T  10927711 catcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 10927634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 11786017 - 11785956
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactg 435  Q
    ||||||||||  |||||||| ||||||||||||||| ||| ||| ||||| ||||| |||||    
T  11786017 cggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactg 11785956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 434
Target Start/End: Original strand, 15884564 - 15884624
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcact 434  Q
    ||||||||||| || |||||||| |||| ||||| | ||||||| ||||| ||||||||||    
T  15884564 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact 15884624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 23895668 - 23895596
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||| |||||||||||  |||||||||   ||||||| |||||  ||||||||||  |||||||||||    
T  23895668 gtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgtt 23895596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 35496275 - 35496355
Alignment:
Q  386 catcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttc-ctggaaattgaacc 465  Q
    ||||||||||| ||||||||||   ||||| | ||||| |||||||||||| |||| ||||||| | ||| ||||||||||    
T  35496275 catcaaaggtgggcgattaatccagctcgtacgtagaggcatgcgcactgaccaagtgttgtttcctctgaaaattgaacc 35496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 16983 - 16905
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    ||||||||||| || || ||||||||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||||||    
T  16983 catcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgttt 16905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 10669690 - 10669616
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||| ||||||||| ||||||||| |||||||||||||||||  |||||||||||    
T  10669690 cggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgtt 10669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 18902538 - 18902612
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||||| ||||||| |||||||| |||||||| ||||||||||||    
T  18902538 cggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgtt 18902612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 34346295 - 34346369
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||||||||||||||| ||| ||||| ||||| |||||  |||| ||||||    
T  34346295 cggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgtt 34346369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 33005852 - 33005775
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| ||  |||||||||||||||||||| ||| ||| ||||| |||||||||||  |||| ||||||    
T  33005852 catcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttgtt 33005775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 16035035 - 16034961
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||||||| ||||||||| ||||| | ||||| | || || ||||| ||||| ||||||||||||    
T  16035035 cggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgtt 16034961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 34722766 - 34722704
Alignment:
Q  386 catcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| |||| ||||| | ||||||| |||||||||| ||||||| |||||||||||    
T  34722766 catcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgtt 34722704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 37560271 - 37560197
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||| |||| |||||||||||  ||||||||| | ||||||| ||||| |||||||||||| ||| |||||||    
T  37560271 cggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgtt 37560197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 12455408 - 12455315
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt-tcctggaaattgaaccc 466  Q
    ||||||||||| || ||| ||||||||| ||||| | ||||||| ||||| |||||||||||   |||||||||||  ||||||||| ||||||    
T  12455408 cggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaaccc 12455315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 15234066 - 15234143
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||||||  ||||||| ||| ||| |||||| ||| |||| ||||| ||||||||||| ||||| ||||||    
T  15234066 catcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgtt 15234143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 464
Target Start/End: Complemental strand, 31088431 - 31088342
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaac 464  Q
    |||||||||| |||||| |||| | |  ||||||||||| ||| ||||| |||||  |||| ||||||||||||||||||| ||| ||||    
T  31088431 ggtttccgacccatcaatggtgggtggctaatctgactcatgcgtagaggcatgcatactgttcaagcgttgttttcctgggaatcgaac 31088342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 3848929 - 3848997
Alignment:
Q  381 cgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    |||| |||||||||||| ||| ||||| ||||||||| ||||||||||||| |||  ||| ||||||||    
T  3848929 cgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgttt 3848997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 34356302 - 34356230
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||| |||||| ||||  ||||||||| | ||| ||||||||| |||||||||||| |||| ||||||    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgtt 34356230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 450
Target Start/End: Complemental strand, 5035385 - 5035310
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtttt 450  Q
    |||||||||| ||| |||||||   |||||||| |  |||||| ||||||||||||||||| |||||| |||||||    
T  5035385 ggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgtttt 5035310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 45263690 - 45263749
Alignment:
Q  389 caaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||| ||||||||||||| | ||||||| ||||| |||||||||||  |||||||||||    
T  45263690 caaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 45263749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 436
Target Start/End: Complemental strand, 2785030 - 2784968
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactga 436  Q
    |||||||||||||||||| | ||  ||| ||||||||||| ||| ||||| ||||||||||||    
T  2785030 cggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactga 2784968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 10823158 - 10823084
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| ||  ||||||| |||| ||||| | ||||||| ||||| |||||||||||  |||||||||||    
T  10823158 cggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 10823084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 25540412 - 25540486
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||  ||| ||||| | ||||||| ||||| |||||||||||  |||||||||||    
T  25540412 cggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 25540486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 432
Target Start/End: Complemental strand, 29697617 - 29697563
Alignment:
Q  378 ttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgca 432  Q
    ||||||| || ||||||||||||| |||||| |||| ||| ||||||||||||||    
T  29697617 ttccgacccagcaaaggtgagcgactaatctaactcatgcgtagagacatgcgca 29697563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 452
Target Start/End: Complemental strand, 44773361 - 44773283
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcc 452  Q
    ||||||||||| |||||||||||||||| ||||| | |||  ||| |||| ||||| |||||  ||| |||||||||||    
T  44773361 cggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgttttcc 44773283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 42770656 - 42770733
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||| |||| || ||||||||  ||||||||| | |||||||  |||| |||||||||||  |||||||||||    
T  42770656 catcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgtt 42770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 19976818 - 19976886
Alignment:
Q  377 tttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt 445  Q
    ||||||| |||||||||||| |||| ||||  ||||  ||| |||||||||||||||||| ||| ||||    
T  19976818 tttccgattcatcaaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgtt 19976886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 376 - 445
Target Start/End: Complemental strand, 34719873 - 34719804
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt 445  Q
    ||||||||| || ||||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||    
T  34719873 gtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgtt 34719804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 15466066 - 15465990
Alignment:
Q  372 atcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||||| || |||||||||||||  |||| ||||||||| ||||| |||| ||||||| |||||||||||    
T  15466066 atcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgtt 15465990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 452
Target Start/End: Complemental strand, 5504130 - 5504052
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcc 452  Q
    ||||||||||| |||||||||||  ||| ||||| | ||| ||| ||||| |||| ||||| |||||||||||||||||    
T  5504130 cggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttcc 5504052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 448
Target Start/End: Original strand, 18649377 - 18649435
Alignment:
Q  390 aaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||| |||||||||||| ||||| | ||||| ||||||||||| ||||||||||||    
T  18649377 aaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgtt 18649435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 38859125 - 38859179
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatg 428  Q
    |||||| |||| ||||||||||| |||||||||||||||||||| ||||| ||||    
T  38859125 cggttttcgacccatcaaaggtgggcgattaatctgactcgtgcgtagaggcatg 38859179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 10336618 - 10336541
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||| |||  |||||||||||  ||||||||| | ||| ||| ||||| ||||||||||| ||||||||||||    
T  10336618 catcggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 10336541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 16956564 - 16956491
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||| || |||||||||| || ||||| | ||||||| ||||| ||||||||||| |||| |||||||    
T  16956564 ggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 16956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 449
Target Start/End: Complemental strand, 14357854 - 14357779
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    ||||||||||| |||||| ||| | ||||||||| |  |||||| ||||| ||||||||||| |||| ||||||||    
T  14357854 cggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgttt 14357779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 452
Target Start/End: Complemental strand, 2567375 - 2567297
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcc 452  Q
    ||||||||||| || ||||| ||  ||  ||||||||||||||  ||||| |||||||||||  |||||||||||||||    
T  2567375 cggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttcc 2567297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 41696604 - 41696674
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaag 441  Q
    |||| ||||||||  |||||||||||||||| |||||||| |||||| ||||| ||| | ||||| |||||    
T  41696604 catcagtttccgatccatcaaaggtgagcgactaatctgattcgtgcgtagaggcatacacactggtcaag 41696674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 5855624 - 5855547
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| ||  |||||||| ||| ||||| | ||| ||| ||||| |||||||||||  |||||||||||    
T  5855624 catcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgtt 5855547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 32142852 - 32142929
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| |||||||||||||||| ||||  | ||| ||| || || |||||||||||  |||| ||||||    
T  32142852 catcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgtt 32142929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 447
Target Start/End: Original strand, 33418125 - 33418197
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgt 447  Q
    ||||||||||  | ||||||||  ||| ||||| | ||||||||||||| |||||||||||  ||||||||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgt 33418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 24506657 - 24506749
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaaccc 466  Q
    ||||||||||| || ||| ||||||||| ||||||||||| ||| ||||| |||| |||||| ||||||||||||| |||| |||| ||||||    
T  24506657 cggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttccctgaaaatcgaaccc 24506749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 50405612 - 50405687
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    ||||||||||| || ||| |||| |||| ||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  50405612 cggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgttt 50405687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 29128020 - 29127924
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt-ttcctggaaattgaaccc 466  Q
    |||||||||||||| || |||||||| |||| ||||| | ||| ||| ||||| |||||||||||| |||| |||||| | ||||||||| ||||||    
T  29128020 catcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaaccc 29127924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 30045917 - 30045845
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||| |||| |||||||||||  ||| ||||| ||||||||| |||||||||||||||||  |||||||||||    
T  30045917 gtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgtt 30045845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 465
Target Start/End: Complemental strand, 4638255 - 4638160
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt-tcctggaaattgaacc 465  Q
    |||||||||||||| ||| ||||||| || | ||||| | ||||||| |||||  |||||||||| ||||||||||||| |||||| ||| |||||    
T  4638255 catcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 3507542 - 3507616
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||| ||||| | ||||||| ||||| |||||||||||  |||| ||||||    
T  3507542 cggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 3507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 26361976 - 26362050
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| ||||||||||| |||| ||||| | ||||||| ||||| ||||| |||||| ||| |||||||    
T  26361976 cggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgtt 26362050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 55069688 - 55069762
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||||||||| | ||||||| ||||| |||| ||||||  ||| |||||||    
T  55069688 cggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgtt 55069762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 35998596 - 35998665
Alignment:
Q  390 aaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaat 459  Q
    |||||||  |||||||||  |||||||| ||||| |||| |||||||||||||||||||| ||| |||||    
T  35998596 aaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtttccctcgaaat 35998665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 434
Target Start/End: Complemental strand, 10043780 - 10043720
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcact 434  Q
    ||||||||||| || ||| ||||||||||||||||| ||||||| ||||| |||| |||||    
T  10043780 cggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcatgtgcact 10043720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 446
Target Start/End: Complemental strand, 23511665 - 23511593
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttg 446  Q
    |||||| |||| |||||||||||  ||||||||| ||||| ||| ||||| ||||||||||| |||| |||||    
T  23511665 cggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttg 23511593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 26043910 - 26043836
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||| |||||| ||||||||||||| ||||| | ||| ||| ||||| |||||||||||  |||| ||||||    
T  26043910 cggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 26043836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 52364813 - 52364883
Alignment:
Q  378 ttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||| ||||||||||   |||||||||   ||||||| ||||| ||||||||||| ||||||||||||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 52364883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 31138102 - 31138159
Alignment:
Q  372 atcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgc 429  Q
    |||||||||||||||||||| | ||  ||||||||||||||  ||||||||| |||||    
T  31138102 atcggtttccgactcatcaatgatggacgattaatctgacttatgcatagaggcatgc 31138159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 45450456 - 45450541
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaat 459  Q
    |||||||| ||||||||||||||  ||| ||||||  ||  ||| ||||| ||||||||||| |||||| |||||  |||||||||    
T  45450456 cggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttcccctggaaat 45450541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 43330756 - 43330816
Alignment:
Q  389 caaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    |||||||| |||| ||||| | ||||||| ||||| ||||||||||| ||||| |||||||    
T  43330756 caaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttt 43330816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 448
Target Start/End: Complemental strand, 24875441 - 24875370
Alignment:
Q  377 tttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||| |||||||||||  ||||||||| | ||||||| ||||||||||||||||| |||| |||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgtt 24875370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 447
Target Start/End: Complemental strand, 14728182 - 14728109
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgt 447  Q
    ||||||||||| |||||||||||||| | ||||| | ||| ||| ||||| |||||||||||| ||||||||||    
T  14728182 cggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgt 14728109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 19839429 - 19839352
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||| |||||||||||  ||||||  |||| |||||||||||||   ||||| ||||||||||||||||||||||||    
T  19839429 catcgatttccgactcactaaaggtaggcgactaatctgactcgtatgtagaggcatgcgcactgatcaagcgttgtt 19839352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 448
Target Start/End: Complemental strand, 41801073 - 41801002
Alignment:
Q  377 tttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||| |||||||| ||| ||| ||||| | ||||||| |||||||||||||| || ||||||||||||    
T  41801073 tttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgtt 41801002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 2485298 - 2485236
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcac 433  Q
    |||||||||||||| |||||||||||||||| ||||| ||||| | | ||||| |||||||||    
T  2485298 catcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcac 2485236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 13664359 - 13664285
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||| ||||||||||| ||| ||| ||||| |||||||||||  |||| ||||||    
T  13664359 cggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgtt 13664285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 20255466 - 20255394
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||| ||||||||  ||| ||||| ||||| ||| ||||| ||||||||||| ||||| ||||||    
T  20255466 gtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgtt 20255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 26077226 - 26077166
Alignment:
Q  388 tcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||| ||||||||||||||| ||||||| ||||| |||| ||||||  |||||||||||    
T  26077226 tcaaagatgagcgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgtt 26077166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 38897728 - 38897819
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaaccc 466  Q
    |||||||||  || |||||||| || | ||||| | ||||||| ||||| |||||||||||  |||||||||||  ||||||||| ||||||    
T  38897728 ggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaaccc 38897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 7336694 - 7336640
Alignment:
Q  399 cgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcct 453  Q
    ||||||||| | ||||||| ||||| ||||||||||||| |||||||||| ||||    
T  7336694 cgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctcct 7336640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 23247371 - 23247433
Alignment:
Q  386 catcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||  ||| ||||||| ||||||| ||||| |||||  |||||||||||||||||    
T  23247371 catcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgtt 23247433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 38296735 - 38296781
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgc 417  Q
    |||||||||||||| ||||||||||| |||| ||||| |||||||||    
T  38296735 catcggtttccgacccatcaaaggtgggcgactaatccgactcgtgc 38296781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 42086426 - 42086352
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||  ||| ||||| | ||| ||| ||||| ||||||||||| ||||||||||||    
T  42086426 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgtt 42086352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 466
Target Start/End: Complemental strand, 24499054 - 24498989
Alignment:
Q  401 attaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaaccc 466  Q
    ||||||| | ||||| | ||||| ||||||||||||||||||||| ||||| | ||||| ||||||    
T  24499054 attaatccggctcgtacgtagaggcatgcgcactgatcaagcgttattttcttagaaatcgaaccc 24498989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 15034177 - 15034081
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcc-tggaaattgaaccc 466  Q
    |||||||||||||  |||||||||||  | | ||||| | ||| ||| ||||| ||||| |||||| |||| ||||||| || ||||||||||||||    
T  15034177 catcggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaaccc 15034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 3159477 - 3159551
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||| ||||||||| ||||||| ||||||| ||||| |||||||||||  |||||||||||    
T  3159477 cggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 3159551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 10541118 - 10541026
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt-tcctggaaattgaaccc 466  Q
    ||||||||||  ||||||||||| |||||||||||| ||||||| ||||| ||||| |||||  ||||||||||||  ||||||||| ||||||    
T  10541118 cggtttccgatccatcaaaggtg-gcgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaaccc 10541026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 442
Target Start/End: Complemental strand, 14858813 - 14858745
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagc 442  Q
    ||||||| ||| |||||||||||  ||| ||||||||||||| | ||||||||||||||||| ||||||    
T  14858813 cggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagc 14858745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 36145223 - 36145298
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    |||||||||| ||||||||||||  ||| ||||| | ||| ||  ||||| |||||||||||||||||||||||||    
T  36145223 cggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgttt 36145298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 38166130 - 38166056
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||| | ||||||| ||||| |||||||||||  |||||||||||    
T  38166130 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgtt 38166056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 55921137 - 55921063
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||||||||| | ||| | | ||||| |||||||||||| |||| ||||||    
T  55921137 cggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgtt 55921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 8424660 - 8424583
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||| ||| |||| || ||||| |||||||||||| || ||||||||||||| |||||||||||  ||| |||||||    
T  8424660 catcgattttcgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgttgtt 8424583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 21192743 - 21192682
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactg 435  Q
    |||||| ||||||| |||| ||| |||||||||| ||||||||| ||||| |||||||||||    
T  21192743 cggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactg 21192682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 502
Target Start/End: Complemental strand, 43458716 - 43458587
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt-ttcctggaaattgaaccc--tatt 470  Q
    |||||||||||||||||||||||  ||| ||||| | ||||| | ||||| |||||||||||  |||||||| ||  |||||| ||| ||| ||  ||||    
T  43458716 cggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtatt 43458617  T
Q  471 ccccaaatatacatctttggaatgagcttctt 502  Q
    ||||||  |||| || ||||||||||||||||    
T  43458616 ccccaa--atacgtccttggaatgagcttctt 43458587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 14859392 - 14859328
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaa 440  Q
    ||||||||| |||||||||||   || ||||||| ||||||| ||||||||||||||||| ||||    
T  14859392 gtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaa 14859328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 449
Target Start/End: Complemental strand, 24166553 - 24166478
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    ||||||||||  ||||||||||| | || ||||||| ||||||| ||||| |||||||||||  ||| ||||||||    
T  24166553 cggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgttt 24166478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 3574471 - 3574545
Alignment:
Q  391 aaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt-ttcctggaaattgaac 464  Q
    ||||||||||| ||||| ||||||||| ||||| |||||||||||  |||| |||||| | ||||| ||||||||    
T  3574471 aaggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaac 3574545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 7246654 - 7246728
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||| | ||| ||| ||||| |||||||||||  |||||||||||    
T  7246654 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 7246728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 40780869 - 40780943
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||  ||| ||||| | ||| ||| ||||| |||||||||||| |||||||||||    
T  40780869 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtt 40780943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 5472858 - 5472931
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttt 449  Q
    |||| |||| || |||||||| |||| ||||| | ||||||| ||||| |||||||||||  ||||||||||||    
T  5472858 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttt 5472931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 21429404 - 21429343
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactg 435  Q
    ||||||||||| || ||||||||  ||| || |||||||||||| ||||| |||||||||||    
T  21429404 cggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactg 21429343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 31635752 - 31635817
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactga 436  Q
    ||||| |||| ||| |||||||| || ||||||||||  |||| ||| ||||||||||||||||||    
T  31635752 catcgatttctgacccatcaaagatgggcgattaatccaactcatgcgtagagacatgcgcactga 31635817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 36262776 - 36262849
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||| ||| || |||||||| |||| ||||| ||||||||| ||||| |||| ||||||  |||||||||||    
T  36262776 ggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt 36262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 47078560 - 47078487
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||| || ||| ||||||||| ||||| | ||||||| ||||| |||| ||||||  |||||||||||    
T  47078560 ggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgtt 47078487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 435
Target Start/End: Complemental strand, 31588792 - 31588728
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactg 435  Q
    |||||||||||||  || |||| |||||||| ||||| | ||| ||| |||||||||||||||||    
T  31588792 catcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactg 31588728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 10311479 - 10311551
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||| |||| || ||| ||||||||| |||||| |||||||| |||||||||||||||||  |||||||||||    
T  10311479 gttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgtt 10311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 9633633 - 9633707
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||| | ||||||| ||||| |||||||||||  |||||||||||    
T  9633633 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 9633707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 5253231 - 5253305
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||||||||| | ||| ||| ||||| |||||||||||  |||| ||||||    
T  5253231 cggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 5253305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 30788861 - 30788935
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||| | ||||||| ||||| |||||||||||  ||| |||||||    
T  30788861 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt 30788935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 2271312 - 2271385
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||| ||| |||||||||||  ||| ||||| | ||||||| |||||||||||||||||   ||||||||||    
T  2271312 ggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt 2271385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 30410550 - 30410473
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| || ||||| |||||||||||||   ||| ||| ||||| ||||||||||| | ||| ||||||    
T  30410550 catcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggttaagtgttgtt 30410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 5029917 - 5029845
Alignment:
Q  376 gtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||| |||||||| || |||| |||||  |||| ||| ||||| |||||||||||| ||| |||||||    
T  5029917 gtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgtt 5029845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 434
Target Start/End: Complemental strand, 8932763 - 8932703
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcact 434  Q
    ||||||||||| ||||||||||| | |||||||| | ||| ||| ||||| ||||||||||    
T  8932763 cggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcact 8932703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 434
Target Start/End: Complemental strand, 8944229 - 8944169
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcact 434  Q
    ||||||||||| ||||||||||| | |||||||| | ||| ||| ||||| ||||||||||    
T  8944229 cggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcact 8944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 12662 - 12600
Alignment:
Q  386 catcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| |||| ||||| ||||| ||| ||||| ||||||||||| ||||||||||||    
T  12662 catcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt 12600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 671 - 597
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||| ||||||| ||| | | ||||| ||||| ||||||||||| ||||||    
T  671 cggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgtt 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 21530849 - 21530775
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||||||||  | ||||||| ||||| |||| ||||||| |||| ||||||    
T  21530849 cggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgtt 21530775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 37515022 - 37514948
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| ||  || ||||| ||||||||| | ||||||| |||||||||||||||||| ||| |||||||    
T  37515022 cggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgtt 37514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 41267929 - 41268003
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt 445  Q
    |||||||||||||| |||||||||||  ||| |||||| |||| ||| ||||| ||||| |||| ||||||||||    
T  41267929 catcggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatgcacactaatcaagcgtt 41268003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 451
Target Start/End: Original strand, 42210267 - 42210347
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttc 451  Q
    |||||||||||||| || ||| |||| | |||||||| | ||||||| ||||| |||||||||||  ||| ||||||||||    
T  42210267 catcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttc 42210347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 8734694 - 8734768
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||||| ||||||| | ||| |||||||||||  ||||| |||||    
T  8734694 cggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgtt 8734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 13095959 - 13095885
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||| ||||| | ||| ||| ||||| |||||||||||  |||| ||||||    
T  13095959 cggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 13095885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 19914723 - 19914785
Alignment:
Q  386 catcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| |||||||||||| ||| ||| ||||| |||||||| ||  |||||||||||    
T  19914723 catcaaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgtt 19914785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 34659327 - 34659253
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||| |||| || ||| |||| |||| ||||| | ||||||| ||||| ||||||||||| ||||||||||||    
T  34659327 cggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 34659253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 38578875 - 38578949
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || |||||||| |||| ||||| | ||| ||| ||||| |||||||||||  |||||||||||    
T  38578875 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgtt 38578949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 44336969 - 44336903
Alignment:
Q  399 cgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt-gttttcctggaaattgaac 464  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||| ||||  ||||||||||||| ||||    
T  44336969 cgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 44336903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 45960011 - 45960085
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||  |||||||||||||||| ||||| | ||  ||| ||||| |||||||||||| |||| ||||||    
T  45960011 cggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgtt 45960085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Original strand, 17748387 - 17748464
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| || ||||||||  ||| ||||| | ||||| | ||||| |||||||||||  |||||||||||    
T  17748387 catcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgtt 17748464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 29805449 - 29805522
Alignment:
Q  375 ggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||  ||||||   |||||||| || ||| ||| |||||||||||||||||| ||| |||||||    
T  29805449 ggtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgtt 29805522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 48224784 - 48224829
Alignment:
Q  419 tagagacatgcgcactgatcaagcgttgttttcctggaaattgaac 464  Q
    |||| |||||||||||||||||||||||||  | ||||||||||||    
T  48224784 tagatacatgcgcactgatcaagcgttgttcccatggaaattgaac 48224829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 24969334 - 24969425
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgttttcctggaaattgaaccc 466  Q
    ||||||||||  |||||||| ||||||||||||| |||| || | ||||| || ||||||||  |||| |||| || ||||||||| ||||||    
T  24969334 cggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttg-ttccctggaaatcgaaccc 24969425  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 29152044 - 29151948
Alignment:
Q  371 catcggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt-ttcctggaaattgaaccc 466  Q
    |||||||||||||| |||||| |||   ||||||||| |  |||||  ||||| ||||||||||| |||| ||||||| ||||||| ||| ||||||    
T  29152044 catcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaaccc 29151948  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 34865909 - 34865961
Alignment:
Q  398 gcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtttt 450  Q
    |||| ||||||| ||||||||||||| |||| |||||||||||| ||| ||||    
T  34865909 gcgactaatctggctcgtgcatagaggcatgtgcactgatcaagtgttatttt 34865961  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 41945571 - 41945503
Alignment:
Q  377 tttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgtt 445  Q
    ||||||||||| ||||||||  ||| ||||| | ||||||| ||||| |||||||||||  ||||||||    
T  41945571 tttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 41945503  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 6956 - 6882
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||||||| || ||||||||||||| ||||| | ||| ||| ||||| |||||||||||  |||| ||||||    
T  6956 cggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 6882  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 41145 - 41071
Alignment:
Q  374 cggtttccgactcatcaaaggtgagcgattaatctgactcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    |||||||||||||| ||||| || |||| ||||| | ||||||| ||||| ||||| |||||| |||| ||||||    
T  41145 cggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgtt 41071  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 271119 - 271156
Alignment:
Q  411 ctcgtgcatagagacatgcgcactgatcaagcgttgtt 448  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  271119 ctcgtgcgtagagacatgcgcactgaccaagcgttgtt 271156  T

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