View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5822_high_8 (Length: 392)

Name: NF5822_high_8
Description: NF5822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5822_high_8
NF5822_high_8
[»] chr5 (58 HSPs)
chr5 (1-377)||(43010595-43010964)
chr5 (190-258)||(29657965-29658033)
chr5 (281-353)||(11991281-11991354)
chr5 (192-258)||(15364109-15364175)
chr5 (190-243)||(2878742-2878795)
chr5 (290-347)||(22201982-22202039)
chr5 (294-351)||(42808959-42809016)
chr5 (290-365)||(2878722-2878797)
chr5 (268-351)||(30852150-30852233)
chr5 (202-253)||(42808965-42809016)
chr5 (294-351)||(6008329-6008387)
chr5 (290-328)||(6125289-6125327)
chr5 (186-243)||(15413955-15414012)
chr5 (188-258)||(26003105-26003175)
chr5 (188-258)||(29659168-29659238)
chr5 (270-347)||(1372019-1372096)
chr5 (290-347)||(17128261-17128318)
chr5 (204-241)||(22573634-22573671)
chr5 (190-235)||(29658130-29658175)
chr5 (206-258)||(2577354-2577406)
chr5 (202-253)||(6008335-6008387)
chr5 (294-342)||(10537269-10537317)
chr5 (206-258)||(13739337-13739389)
chr5 (260-328)||(17657244-17657312)
chr5 (202-258)||(28625588-28625644)
chr5 (190-254)||(32964457-32964521)
chr5 (195-243)||(35078704-35078752)
chr5 (206-253)||(17128261-17128308)
chr5 (206-253)||(29922245-29922292)
chr5 (300-363)||(43010712-43010775)
chr5 (261-339)||(12987031-12987109)
chr5 (261-339)||(13060619-13060697)
chr5 (261-347)||(24030198-24030284)
chr5 (206-240)||(41125687-41125721)
chr5 (290-331)||(1473355-1473396)
chr5 (206-258)||(16436286-16436339)
chr5 (181-253)||(26002955-26003027)
chr5 (270-319)||(32963788-32963837)
chr5 (290-339)||(33924827-33924876)
chr5 (202-242)||(43318981-43319022)
chr5 (190-253)||(2531293-2531356)
chr5 (181-253)||(12467222-12467294)
chr5 (294-365)||(15122510-15122581)
chr5 (190-253)||(15122512-15122575)
chr5 (294-365)||(15709941-15710012)
chr5 (190-249)||(15709951-15710010)
chr5 (190-253)||(20458613-20458676)
chr5 (202-258)||(29418674-29418730)
chr5 (206-258)||(29922115-29922167)
chr5 (190-222)||(30852300-30852332)
chr5 (294-365)||(33667442-33667513)
chr5 (190-253)||(33667448-33667511)
chr5 (190-253)||(33757055-33757118)
chr5 (214-258)||(33924716-33924760)
chr5 (202-258)||(40152798-40152854)
chr5 (206-258)||(41059715-41059767)
chr5 (190-258)||(42478934-42479002)
chr5 (214-258)||(42852129-42852173)
[»] chr3 (50 HSPs)
chr3 (188-258)||(47403670-47403740)
chr3 (199-241)||(27769622-27769664)
chr3 (263-349)||(11528872-11528958)
chr3 (186-251)||(21296729-21296794)
chr3 (290-347)||(10272105-10272162)
chr3 (188-242)||(10448739-10448793)
chr3 (191-258)||(17752042-17752109)
chr3 (191-258)||(19053362-19053429)
chr3 (292-351)||(32901196-32901255)
chr3 (294-351)||(2086741-2086799)
chr3 (261-347)||(34707730-34707816)
chr3 (207-253)||(40581133-40581179)
chr3 (294-366)||(20894467-20894539)
chr3 (290-347)||(24842153-24842210)
chr3 (220-253)||(24842163-24842196)
chr3 (280-365)||(37586434-37586519)
chr3 (300-357)||(47403678-47403735)
chr3 (202-258)||(3876185-3876241)
chr3 (261-353)||(7292657-7292749)
chr3 (190-253)||(10272089-10272152)
chr3 (300-352)||(17752052-17752104)
chr3 (300-352)||(19053372-19053424)
chr3 (206-258)||(32983217-32983269)
chr3 (190-258)||(40240488-40240555)
chr3 (294-342)||(40581127-40581175)
chr3 (294-364)||(3645269-3645339)
chr3 (261-351)||(10448752-10448843)
chr3 (270-368)||(10667359-10667458)
chr3 (188-242)||(28741281-28741335)
chr3 (294-352)||(29614171-29614230)
chr3 (191-253)||(30499934-30499996)
chr3 (206-253)||(30917550-30917597)
chr3 (294-364)||(36266210-36266280)
chr3 (294-351)||(4257351-4257409)
chr3 (192-253)||(4257357-4257418)
chr3 (261-347)||(53218057-53218143)
chr3 (225-258)||(2145607-2145640)
chr3 (206-243)||(22809260-22809297)
chr3 (190-251)||(26489088-26489148)
chr3 (220-253)||(28623290-28623323)
chr3 (290-347)||(29270344-29270401)
chr3 (190-243)||(30321796-30321849)
chr3 (202-243)||(32901214-32901255)
chr3 (202-243)||(33946608-33946649)
chr3 (225-258)||(42956124-42956157)
chr3 (225-258)||(45049319-45049352)
chr3 (186-258)||(20174846-20174918)
chr3 (270-354)||(27769622-27769705)
chr3 (214-258)||(34707647-34707691)
chr3 (206-258)||(40581002-40581054)
[»] chr8 (41 HSPs)
chr8 (270-351)||(19327846-19327926)
chr8 (190-258)||(16706010-16706078)
chr8 (190-258)||(4326122-4326190)
chr8 (202-253)||(19327846-19327897)
chr8 (188-254)||(19328002-19328068)
chr8 (198-258)||(18217196-18217256)
chr8 (190-253)||(34102742-34102806)
chr8 (190-253)||(16706156-16706219)
chr8 (188-258)||(14262434-14262504)
chr8 (294-351)||(14942402-14942460)
chr8 (294-340)||(16926782-16926828)
chr8 (290-347)||(13131413-13131470)
chr8 (202-258)||(24866873-24866929)
chr8 (202-258)||(28280817-28280873)
chr8 (183-258)||(10213803-10213878)
chr8 (190-241)||(36187254-36187305)
chr8 (188-263)||(37305258-37305333)
chr8 (190-243)||(2019715-2019768)
chr8 (261-363)||(16706117-16706219)
chr8 (302-364)||(18217187-18217249)
chr8 (206-252)||(32131423-32131469)
chr8 (228-258)||(36194333-36194363)
chr8 (190-251)||(38195454-38195515)
chr8 (294-362)||(218302-218370)
chr8 (294-362)||(694862-694930)
chr8 (294-362)||(699071-699139)
chr8 (294-362)||(731925-731993)
chr8 (294-362)||(855821-855889)
chr8 (302-351)||(12607194-12607243)
chr8 (187-251)||(16972263-16972327)
chr8 (290-347)||(16972403-16972460)
chr8 (294-351)||(26047006-26047063)
chr8 (214-258)||(9131062-9131106)
chr8 (294-365)||(12607045-12607116)
chr8 (190-258)||(29218161-29218229)
chr8 (221-253)||(32751136-32751168)
chr8 (270-365)||(34102712-34102808)
chr8 (290-322)||(34286609-34286641)
chr8 (294-365)||(38195452-38195523)
chr8 (294-365)||(42102072-42102143)
chr8 (190-253)||(42102074-42102137)
[»] chr2 (39 HSPs)
chr2 (190-258)||(1768737-1768805)
chr2 (190-243)||(37409610-37409663)
chr2 (188-243)||(21788422-21788477)
chr2 (261-347)||(33321329-33321415)
chr2 (190-243)||(23956318-23956371)
chr2 (294-351)||(15155791-15155849)
chr2 (290-347)||(4090472-4090529)
chr2 (294-342)||(735907-735955)
chr2 (189-258)||(23956177-23956242)
chr2 (291-347)||(29774728-29774784)
chr2 (290-342)||(34913436-34913488)
chr2 (202-258)||(35515417-35515473)
chr2 (206-253)||(4090472-4090519)
chr2 (190-253)||(9140785-9140848)
chr2 (310-365)||(23956318-23956373)
chr2 (206-253)||(33321368-33321415)
chr2 (214-253)||(33321459-33321498)
chr2 (206-244)||(2790136-2790174)
chr2 (186-243)||(7480968-7481025)
chr2 (214-252)||(29774736-29774774)
chr2 (190-243)||(38215990-38216043)
chr2 (189-242)||(38471858-38471911)
chr2 (294-366)||(446416-446488)
chr2 (290-351)||(21788436-21788497)
chr2 (189-253)||(22898412-22898476)
chr2 (290-347)||(27703504-27703561)
chr2 (206-243)||(27703524-27703561)
chr2 (189-253)||(32366116-32366180)
chr2 (294-350)||(32522095-32522152)
chr2 (208-253)||(34913446-34913491)
chr2 (290-319)||(41554626-41554655)
chr2 (290-319)||(43787849-43787878)
chr2 (190-253)||(2401677-2401740)
chr2 (190-258)||(12442910-12442978)
chr2 (202-258)||(15155921-15155977)
chr2 (186-234)||(22788141-22788189)
chr2 (290-350)||(29133713-29133773)
chr2 (206-258)||(33321238-33321290)
chr2 (190-253)||(40301319-40301382)
[»] scaffold0048 (1 HSPs)
scaffold0048 (270-365)||(58894-58989)
[»] chr1 (40 HSPs)
chr1 (270-365)||(46501027-46501122)
chr1 (291-351)||(46473073-46473133)
chr1 (188-258)||(16708907-16708976)
chr1 (214-258)||(20169372-20169416)
chr1 (186-258)||(46263505-46263577)
chr1 (190-251)||(17348847-17348908)
chr1 (191-253)||(20169232-20169294)
chr1 (261-351)||(20169243-20169333)
chr1 (192-258)||(22593319-22593385)
chr1 (261-351)||(36259308-36259398)
chr1 (188-252)||(6900625-6900689)
chr1 (298-347)||(35590113-35590162)
chr1 (214-251)||(35897681-35897718)
chr1 (294-365)||(15791349-15791420)
chr1 (206-258)||(37329338-37329390)
chr1 (206-253)||(10082233-10082280)
chr1 (179-253)||(35590086-35590160)
chr1 (188-258)||(37712175-37712245)
chr1 (220-254)||(3116116-3116150)
chr1 (261-347)||(4068098-4068184)
chr1 (180-222)||(36259205-36259247)
chr1 (189-242)||(49971217-49971270)
chr1 (206-243)||(391151-391188)
chr1 (261-322)||(6337773-6337834)
chr1 (213-258)||(8845330-8845375)
chr1 (294-347)||(10365154-10365207)
chr1 (185-253)||(16225471-16225539)
chr1 (290-347)||(35897669-35897726)
chr1 (300-363)||(3116117-3116180)
chr1 (190-253)||(5347122-5347185)
chr1 (202-258)||(13039055-13039111)
chr1 (186-258)||(14460947-14461019)
chr1 (202-258)||(15235083-15235139)
chr1 (190-253)||(18327491-18327554)
chr1 (294-365)||(19284861-19284932)
chr1 (271-319)||(22593434-22593482)
chr1 (190-258)||(25485856-25485924)
chr1 (206-258)||(28690112-28690164)
chr1 (217-253)||(41003381-41003417)
chr1 (206-258)||(47413480-47413532)
[»] chr6 (27 HSPs)
chr6 (270-357)||(30533953-30534040)
chr6 (190-258)||(22816495-22816563)
chr6 (190-253)||(4272351-4272412)
chr6 (193-253)||(30533950-30534010)
chr6 (190-253)||(9582512-9582574)
chr6 (190-253)||(34413432-34413495)
chr6 (208-258)||(21609977-21610027)
chr6 (270-319)||(10054392-10054441)
chr6 (294-339)||(21871333-21871378)
chr6 (290-342)||(2040232-2040284)
chr6 (208-243)||(6758612-6758647)
chr6 (206-253)||(21871339-21871386)
chr6 (208-243)||(29623543-29623578)
chr6 (200-258)||(2027096-2027154)
chr6 (189-242)||(6632625-6632678)
chr6 (294-366)||(715975-716047)
chr6 (202-243)||(29623400-29623441)
chr6 (209-258)||(32675818-32675867)
chr6 (294-365)||(1468141-1468212)
chr6 (261-333)||(4272379-4272451)
chr6 (222-258)||(7267890-7267926)
chr6 (221-253)||(17300794-17300826)
chr6 (190-253)||(17914913-17914976)
chr6 (206-258)||(20776462-20776514)
chr6 (290-350)||(23239227-23239287)
chr6 (294-365)||(32615464-32615535)
chr6 (290-322)||(34801095-34801127)
[»] chr7 (45 HSPs)
chr7 (191-253)||(12473174-12473236)
chr7 (190-243)||(23119986-23120039)
chr7 (214-258)||(9534016-9534060)
chr7 (290-357)||(9546430-9546497)
chr7 (186-253)||(9546440-9546507)
chr7 (206-253)||(21249139-21249186)
chr7 (190-249)||(38654228-38654287)
chr7 (270-333)||(41677371-41677434)
chr7 (188-253)||(22032727-22032792)
chr7 (271-365)||(23119947-23120041)
chr7 (300-350)||(27811458-27811508)
chr7 (263-333)||(34922928-34922998)
chr7 (219-253)||(41677370-41677404)
chr7 (281-350)||(12473186-12473255)
chr7 (270-339)||(29390576-29390645)
chr7 (206-243)||(29390616-29390653)
chr7 (190-253)||(16958783-16958846)
chr7 (206-258)||(20888682-20888734)
chr7 (202-258)||(22032870-22032926)
chr7 (190-245)||(35331109-35331164)
chr7 (187-253)||(19913909-19913975)
chr7 (261-351)||(22032740-22032831)
chr7 (189-243)||(38372524-38372578)
chr7 (302-352)||(1312228-1312278)
chr7 (193-251)||(10412869-10412927)
chr7 (201-243)||(48021713-48021755)
chr7 (228-258)||(49104316-49104346)
chr7 (201-258)||(1312221-1312278)
chr7 (294-347)||(16958799-16958852)
chr7 (202-251)||(18251418-18251467)
chr7 (300-368)||(19913907-19913975)
chr7 (190-258)||(29378753-29378821)
chr7 (220-253)||(35246669-35246702)
chr7 (290-347)||(38372541-38372598)
chr7 (188-241)||(38789558-38789611)
chr7 (261-342)||(44613490-44613571)
chr7 (190-242)||(14676026-14676077)
chr7 (190-253)||(16932985-16933048)
chr7 (190-253)||(16938368-16938431)
chr7 (294-365)||(22575551-22575622)
chr7 (190-253)||(22575553-22575616)
chr7 (206-258)||(25908402-25908454)
chr7 (294-365)||(35246637-35246708)
chr7 (290-351)||(39392627-39392690)
chr7 (214-258)||(44834917-44834961)
[»] chr4 (64 HSPs)
chr4 (188-258)||(14987508-14987578)
chr4 (294-366)||(10794959-10795031)
chr4 (294-366)||(10796350-10796422)
chr4 (261-362)||(27368169-27368270)
chr4 (189-253)||(9319022-9319086)
chr4 (208-253)||(40699341-40699386)
chr4 (271-363)||(43415316-43415408)
chr4 (191-243)||(27368218-27368270)
chr4 (290-342)||(31736432-31736484)
chr4 (214-254)||(34633390-34633430)
chr4 (207-258)||(4331438-4331489)
chr4 (261-319)||(896981-897039)
chr4 (220-258)||(43213455-43213493)
chr4 (290-347)||(3564203-3564260)
chr4 (294-366)||(15184511-15184583)
chr4 (220-253)||(19298190-19298223)
chr4 (290-347)||(29877622-29877679)
chr4 (294-347)||(34633382-34633435)
chr4 (201-258)||(52700464-52700521)
chr4 (208-248)||(213008-213048)
chr4 (190-253)||(9201618-9201681)
chr4 (190-253)||(22117321-22117384)
chr4 (206-254)||(31022385-31022433)
chr4 (209-253)||(31736442-31736486)
chr4 (300-352)||(52700464-52700516)
chr4 (190-249)||(10045896-10045955)
chr4 (200-251)||(11298697-11298748)
chr4 (294-364)||(22117320-22117390)
chr4 (206-253)||(29877622-29877669)
chr4 (190-241)||(39116985-39117036)
chr4 (206-252)||(1374420-1374466)
chr4 (290-347)||(948055-948112)
chr4 (206-251)||(3564203-3564248)
chr4 (190-258)||(3564314-3564382)
chr4 (294-343)||(4603381-4603430)
chr4 (220-253)||(4603387-4603420)
chr4 (225-258)||(5905200-5905233)
chr4 (302-363)||(11298697-11298758)
chr4 (290-350)||(12495692-12495753)
chr4 (290-347)||(18424323-18424380)
chr4 (190-250)||(22823763-22823823)
chr4 (290-347)||(23297421-23297478)
chr4 (206-243)||(29996705-29996742)
chr4 (283-328)||(39932793-39932838)
chr4 (214-243)||(42611934-42611963)
chr4 (270-319)||(46650282-46650331)
chr4 (190-258)||(2547957-2548025)
chr4 (202-258)||(9153504-9153560)
chr4 (202-253)||(10796364-10796416)
chr4 (206-258)||(12495570-12495622)
chr4 (190-253)||(15179785-15179848)
chr4 (206-258)||(17222937-17222989)
chr4 (202-258)||(18630817-18630873)
chr4 (294-334)||(19298184-19298224)
chr4 (202-258)||(25638368-25638424)
chr4 (270-322)||(29615382-29615434)
chr4 (207-243)||(31022523-31022559)
chr4 (205-237)||(33533910-33533942)
chr4 (190-253)||(38345877-38345940)
chr4 (214-258)||(38876056-38876100)
chr4 (186-253)||(43415345-43415412)
chr4 (190-258)||(46650383-46650450)
chr4 (225-253)||(54412103-54412131)
chr4 (190-222)||(55638154-55638186)
[»] scaffold0332 (2 HSPs)
scaffold0332 (180-258)||(14647-14724)
scaffold0332 (270-319)||(14772-14821)
[»] scaffold0191 (2 HSPs)
scaffold0191 (190-258)||(31236-31306)
scaffold0191 (304-366)||(31245-31309)
[»] scaffold0006 (2 HSPs)
scaffold0006 (202-248)||(40737-40784)
scaffold0006 (190-253)||(279047-279110)
[»] scaffold1367 (1 HSPs)
scaffold1367 (302-351)||(1173-1222)
[»] scaffold1130 (1 HSPs)
scaffold1130 (210-247)||(2236-2273)
[»] scaffold0157 (2 HSPs)
scaffold0157 (290-350)||(24724-24785)
scaffold0157 (206-258)||(24855-24907)
[»] scaffold1088 (1 HSPs)
scaffold1088 (200-243)||(1270-1314)


Alignment Details
Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 377
Target Start/End: Complemental strand, 43010964 - 43010595
Alignment:
Q  1 tgttgacgattttaccaactaaattcattagatttcgcatgactatacttaaagttgtagaattcattgaattttgatggtgagataagcctctcccatt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43010964 tgttgatgattttaccaactaaattcattagatttcgcatgactatacttaaagttgtagaaatcattgaattttgatggtgagataagcctctcccatt 43010865  T
Q  101 atctcaaacatgagaggatctaaatctcgccaacgttttcatccccaccatagcccataaactaattagcacctcaccattaagagtctgtttggattag 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43010864 atctcaaacatgataggatctaaatctcgccaacgttttcatccccaccatagcccataaactaattagcacctcaccattaagagtctgtttggattag 43010765  T
Q  201 acttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaattaatgttttattataaactacaattacaatcgtatgaataata 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||||||||||    
T  43010764 acttattttgagtttatgcaaaacaacttacgcaaataaataaatttttatgttaataaatattttattataaactacaatgacaaacgtatgaataata 43010665  T
Q  301 cataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacggatctgaatatat 377  Q
    |||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||    
T  43010664 cataaaagtttatttatttacataagttgttttacataagc-------aagtctaattcaaacggatctgaatatat 43010595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 29657965 - 29658033
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||    
T  29657965 gtttggattaggcttattttgagcttatgcaaaacaacttatgcaaaaaaataagcttttatgttaatt 29658033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 11991354 - 11991281
Alignment:
Q  281 ttacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagc-ttaaaataagtc 353  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  11991354 ttacaagcttataaataatacataaaagcttatttatttacataagttgttttgcataagcattaaaataagtc 11991281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 15364175 - 15364109
Alignment:
Q  192 ttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||  |||||||||||||||||  |||| |||||||||||||||||||  |||||||||||||    
T  15364175 ttggattcaacttattttgagtttataaaaaagaacttatgcaaataaataagcttttatgttaatt 15364109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 2878795 - 2878742
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||    
T  2878795 gtttggattaggcttattttgagcttatgctaaacagcttatgcaaataaataa 2878742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 22201982 - 22202039
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| ||||    
T  22201982 tatgaataatacataaaagcttatttatttacataagctgttttgcataagctcaaaa 22202039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 42808959 - 42809016
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||| || ||||||||    
T  42808959 aataatacataaaagtttatttatttatataagttgttttccataaactcaaaataag 42809016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 2878722 - 2878797
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    ||||||||||| ||||||| |||||||||| || ||| |||||  |||||||| |||||||| ||||| |||||||    
T  2878722 tatgaataatagataaaagcttatttatttgcataagctgtttagcataagctcaaaataagcctaatccaaacgg 2878797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 30852233 - 30852150
Alignment:
Q  268 ttataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    |||||||||||| |||| | | ||| |||||||||||||||||||||||||| || ||  ||||||||||| | | ||||||||    
T  30852233 ttataaactacatttacgaacttattaataatacataaaagtttatttatttgcataatctgttttacataggttcaaaataag 30852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 42809016 - 42808965
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||||||||| ||||||||||||  ||||||||||| ||||||||    
T  42809016 cttattttgagtttatggaaaacaacttatataaataaataaacttttatgt 42808965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 6008329 - 6008387
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataag 351  Q
    |||||||||||||||||||||||||| || ||||||||||| |||| || |||||||||    
T  6008329 aataatacataaaagtttatttatttgcataagttgttttatataaactctaaaataag 6008387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 6125327 - 6125289
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagtt 328  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  6125327 tatgaataatacataaaagtttatttatttacataagtt 6125289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 15413955 - 15414012
Alignment:
Q  186 gtctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  15413955 gtctgtttggatt-gacttattttagagcttatgcaaaacagcttatgcaaataaataa 15414012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 26003175 - 26003105
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||   ||||||||||| ||||| |||| |||||||| |||||||||| ||||||| ||||||    
T  26003175 ctgtttggattgagcttattttgagcttatgaaaaataacttatgtaaataaataagtttttattttaatt 26003105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 29659238 - 29659168
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||   ||||||||||| ||||| |||| | ||||||||||||||||| ||||||| ||||||    
T  29659238 ctgtttggattgagcttattttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaatt 29659168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 1372019 - 1372096
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||| ||| |||||| | ||| |||||||||||||||| |||||||||||| ||  |||||| |||||||| ||||    
T  1372019 ataaaccacatttacaagcttataaataatacataaaagtgtatttatttacataaactgttttgcataagctcaaaa 1372096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 17128318 - 17128261
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| |||||||||| || ||| |||||| |||||||| ||||    
T  17128318 tatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaaaa 17128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 22573634 - 22573671
Alignment:
Q  204 tattttgagtttatgcaaaacaacttatgcaaataaat 241  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  22573634 tattttgagcttatgcaaaacaacttatgcaaataaat 22573671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29658175 - 29658130
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaa 235  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||    
T  29658175 gtttggattagacttattttgagcttatacaagacaacttatgcaa 29658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 2577354 - 2577406
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| | |||||||||||||||||||| |||||||||||    
T  2577354 ttttgagcttatgaaaaatagcttatgcaaataaataaattgttatgttaatt 2577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 6008387 - 6008335
Alignment:
Q  202 cttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||| ||||||||  ||||||||||||||||||||||||| ||||||||    
T  6008387 cttattttagagtttatataaaacaacttatgcaaataaataaacttttatgt 6008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 10537269 - 10537317
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||||    
T  10537269 aataatacataaaagcttatttatttgcataagctgttttacataagct 10537317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 13739389 - 13739337
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||| |||| |||||||||||||||||||  ||||||| |||||    
T  13739389 ttttgagtttatgaaaaataacttatgcaaataaataagcttttatgataatt 13739337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 17657312 - 17657244
Alignment:
Q  260 atgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagtt 328  Q
    ||||||| | ||||||||||||  ||| | ||||||||||||||||||| |||||||||| || |||||    
T  17657312 atgttttttcataaactacaatggcaagcttatgaataatacataaaagcttatttatttgcataagtt 17657244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 28625644 - 28625588
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||| || ||||| |||| |||||||||||||||||||  |||||||||||||    
T  28625644 cttatttttagcttatgaaaaataacttatgcaaataaataagcttttatgttaatt 28625588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 32964521 - 32964457
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgtt 254  Q
    ||||||| ||| ||| ||||||| |||||||||||||| ||| |||||||||||  |||||||||    
T  32964521 gtttggaataggcttgttttgagcttatgcaaaacaacgtattcaaataaataagcttttatgtt 32964457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 35078704 - 35078752
Alignment:
Q  195 gattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||| |||||||||||  |||||||||||||||||| |||||||||||    
T  35078704 gattaaacttattttgaacttatgcaaaacaacttatacaaataaataa 35078752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 17128261 - 17128308
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| |||||||||||| |||||||||||||||||  ||||||||    
T  17128261 ttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgt 17128308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 29922292 - 29922245
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| ||||||||||||  |||||||||||||||| |||||||||    
T  29922292 ttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgt 29922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 43010712 - 43010775
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaac 363  Q
    |||||||| ||||||||||| |  |||||||||| ||||| || |||||||||||||| |||||    
T  43010712 acataaaaatttatttatttgcgtaagttgttttgcataaactcaaaataagtctaatccaaac 43010775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 12987031 - 12987109
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataa 339  Q
    |||||| | |||||||||  | |||| | |||||| |||||||||||| |||||||||| || ||||| ||||||||||    
T  12987031 tgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataagttcttttacataa 12987109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 13060619 - 13060697
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataa 339  Q
    |||||| | |||||||||  | |||| | |||||| |||||||||||| |||||||||| || ||||| ||||||||||    
T  13060619 tgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataagttcttttacataa 13060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 24030284 - 24030198
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||| | |||||||||  | |||| | ||||||||||||||||||| ||||||||||  | ||| ||||||  ||||||||||||    
T  24030284 tgttttttcataaactactttgacaagcttatgaataatacataaaagcttatttatttggataagctgttttgtataagcttaaaa 24030198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 41125687 - 41125721
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaa 240  Q
    ||||||| |||||||||||||||||||||||||||    
T  41125687 ttttgagcttatgcaaaacaacttatgcaaataaa 41125721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 1473396 - 1473355
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgtt 331  Q
    ||||||||||||||||||| |||||||||| || ||||||||    
T  1473396 tatgaataatacataaaagcttatttatttgcataagttgtt 1473355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 16436286 - 16436339
Alignment:
Q  206 ttttgagtttatgcaaa-acaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||||||| | || |||||||||||| |||| |||||||||||||    
T  16436286 ttttgagtttatgcaaatataatttatgcaaataactaaacttttatgttaatt 16436339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 26002955 - 26003027
Alignment:
Q  181 taagagtctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||| ||| |||||||||| ||||||||| ||| |||| |||||||  |||||||||||||||| |||||||||    
T  26002955 taagggtccgtttggatta-acttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgt 26003027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 32963837 - 32963788
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttattt 319  Q
    |||||||||| |||||| | || |||||||||||| ||||||||||||||    
T  32963837 ataaactacagttacaaacttaagaataatacatagaagtttatttattt 32963788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 33924827 - 33924876
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataa 339  Q
    ||||||| ||| | ||||||||||||||||||| ||||| ||||||||||    
T  33924827 tatgaatgatagagaaaagtttatttatttacataagttattttacataa 33924876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 43318981 - 43319022
Alignment:
Q  202 cttatttt-gagtttatgcaaaacaacttatgcaaataaata 242  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  43318981 cttattttagagcttatgcaaaacaacttatgcaaataaata 43319022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 2531293 - 2531356
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||| | ||||||| ||||||||  |||||||||||||||||||||||| || ||||||    
T  2531293 gtttggatta-atttattttagagtttatataaaacaacttatgcaaataaataagttgttatgt 2531356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 12467222 - 12467294
Alignment:
Q  181 taagagtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||| |||||||||||||| | |  |||||||||||| ||||| |  ||||||||||||||||  ||||||||    
T  12467222 taagtgtctgtttggattaaattatttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgt 12467294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 15122581 - 15122510
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||| ||| || ||||||||||| ||||||| ||||||||| ||||| |||||||    
T  15122581 aataatacataaaaacttatttctttgcataagttgttttatataagctctaaaataag-ctaatccaaacgg 15122510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 15122512 - 15122575
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  ||||||||||||||||| |||||| |||||||||    
T  15122512 gtttggattag-cttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgt 15122575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 15709941 - 15710012
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||| ||||  |||||||||| || ||||||||||| ||||||| ||||||||| ||||| |||||||    
T  15709941 aataatacagaaaaacttatttatttgcataagttgttttatataagctctaaaataag-ctaatccaaacgg 15710012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 15710010 - 15709951
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaattttt 249  Q
    ||||||||||| |||||||| ||| ||||  |||||||||||||||||||||||| |||||    
T  15710010 gtttggattag-cttattttagagcttatataaaacaacttatgcaaataaataagttttt 15709951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 20458676 - 20458613
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||||| |||||||||||||||| ||||||||||    
T  20458676 gtttggattag-cttattttagagcttatataaaacagcttatgcaaataaatacatttttatgt 20458613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 29418674 - 29418730
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| |  |||||||||||||||| ||||||| ||||||    
T  29418674 cttattttgagcttatgaaaaaaagtttatgcaaataaataagtttttatcttaatt 29418730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 29922115 - 29922167
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||| |||| | |||||||||||||||||  |||||| ||||||    
T  29922115 ttttgagtttatgaaaaatagcttatgcaaataaataagcttttatattaatt 29922167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 30852332 - 30852300
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaa 222  Q
    |||| ||||||||||||||||||||||||||||    
T  30852332 gtttagattagacttattttgagtttatgcaaa 30852300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 33667442 - 33667513
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||||||| || ||| ||||||| ||||||| ||||||||| ||||| |||||||    
T  33667442 aataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataag-ctaatccaaacgg 33667513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 33667511 - 33667448
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||||| ||||||||||||||||| |||||||||    
T  33667511 gtttggattag-cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgt 33667448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 33757055 - 33757118
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||||| ||||||||||||||||| |||||||||    
T  33757055 gtttggattag-cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgt 33757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 33924716 - 33924760
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| |||| |||||||||||||||||||  |||||||||||||    
T  33924716 ttatgaaaaataacttatgcaaataaataaccttttatgttaatt 33924760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 40152798 - 40152854
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||  ||||| |||||| |||||||||||||||||  |||||| ||||||    
T  40152798 cttattttgaacttatgaaaaacatcttatgcaaataaataatcttttatattaatt 40152854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 41059715 - 41059767
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| ||||||  ||||||||||||||||  |||||||||||||    
T  41059715 ttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgttaatt 41059767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 42479002 - 42478934
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||| ||||||||| |  ||||  || | ||||||||||||||||||| ||||||| ||||||    
T  42479002 gtttggattaaacttattttaaacttataaaagagaacttatgcaaataaataagtttttatattaatt 42478934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 42852173 - 42852129
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||| ||||||||| |||||||  |||||||||||||    
T  42852173 ttatgcaaaacagcttatgcaactaaataagcttttatgttaatt 42852129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 47403670 - 47403740
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  47403670 ctgtttagattagacttattttaagtttatggaaaataacttatgcaaataaataaatttttatgttaatt 47403740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 27769622 - 27769664
Alignment:
Q  199 agacttattttgagtttatgcaaaacaacttatgcaaataaat 241  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27769622 agacttattttgagtttatgcaaaacaacttatgcaaataaat 27769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 11528958 - 11528872
Alignment:
Q  263 ttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaata 349  Q
    |||||| |||||||||| | ||||   ||||||||||||||||||| ||||||| ||||| |||||||||| |||||| | ||||||    
T  11528958 ttttatcataaactacattaacaaatttatgaataatacataaaagcttatttacttacataagttgttttgcataagttcaaaata 11528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 21296729 - 21296794
Alignment:
Q  186 gtctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||||||| |||||||    
T  21296729 gtctgtttggatt-gacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttat 21296794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 10272162 - 10272105
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||||||||||||||||||||||||||| ||  ||||||||| |||||||| ||||    
T  10272162 tatgaataatacataaaagtttatttatttgcatgagttgttttgcataagctaaaaa 10272105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 10448739 - 10448793
Alignment:
Q  188 ctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaata 242  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  10448739 ctgtttggattag-cttattttagagcttatgcaaaacaacttatgcaaataaata 10448793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 17752042 - 17752109
Alignment:
Q  191 tttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||  |||||||||||| ||||| |||| | |||||| ||||||||||| |||||||||||||    
T  17752042 tttggattgaacttattttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatt 17752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 19053362 - 19053429
Alignment:
Q  191 tttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||  |||||||||||| ||||| |||| | |||||| ||||||||||| |||||||||||||    
T  19053362 tttggattgaacttattttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatt 19053429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 351
Target Start/End: Original strand, 32901196 - 32901255
Alignment:
Q  292 tgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| ||||  |||||||||||    
T  32901196 tgaataataaataaaagcttatttatttacataagttgttttgcatatacttaaaataag 32901255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 2086741 - 2086799
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataag 351  Q
    ||||||||||||||||||||||||||||| ||| |||||  |||||||| |||||||||    
T  2086741 aataatacataaaagtttatttatttacataagctgtttagcataagctctaaaataag 2086799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 34707730 - 34707816
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||| | |||||||||  | |||| | ||||||||||||||||||| |||| |||||||  |||||||||| |||||||| ||||    
T  34707730 tgttttttcataaactaccttaacaagcttatgaataatacataaaagcttatatatttacgtaagttgttttgcataagctcaaaa 34707816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 40581179 - 40581133
Alignment:
Q  207 tttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||    
T  40581179 tttgagcttatgcaaaacaacttatgcaaataaataagcttttatgt 40581133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 20894539 - 20894467
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgga 366  Q
    ||||||||||||||  ||||||||||||| ||| ||||||| ||||||| ||||||||| ||||| ||||||||    
T  20894539 aataatacataaaaacttatttatttacataagctgttttatataagctctaaaataag-ctaatccaaacgga 20894467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 24842153 - 24842210
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||||||||||||||| ||||||||||| || ||||||||||  |||| |||||||    
T  24842153 tatgaataatacataaaaatttatttatttgcataagttgttttttataaccttaaaa 24842210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 24842196 - 24842163
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||||||||||||||||||||||||||    
T  24842196 aaaacaacttatgcaaataaataaatttttatgt 24842163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 365
Target Start/End: Original strand, 37586434 - 37586519
Alignment:
Q  280 attacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    ||||||| | |||||||| ||| ||||| || ||||||||||| || |||||||  ||||||| |||||||  |||||||||||||    
T  37586434 attacaaacttatgaatagtacctaaaaattaatttatttacataatttgttttgtataagctcaaaataaacctaattcaaacgg 37586519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 47403735 - 47403678
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaat 357  Q
    |||||||| ||||||||||| || ||||| |||| ||||| |||||||||||||||||    
T  47403735 acataaaaatttatttatttgcataagttattttccataaacttaaaataagtctaat 47403678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 3876185 - 3876241
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | ||||||||||||||||| ||||||| ||||||    
T  3876185 cttattttgagcttatgaaaaatagcttatgcaaataaataagtttttatattaatt 3876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 353
Target Start/End: Complemental strand, 7292749 - 7292657
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtc 353  Q
    |||||| | |||||||| | | |||| | |||||||||||||||| || |||| ||||| || |||||| |||||||||| | ||||||||||    
T  7292749 tgttttttcataaactatattgacaaacttatgaataatacataagagcttatgtatttgcataagttgctttacataagttcaaaataagtc 7292657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 10272089 - 10272152
Alignment:
Q  190 gtttggattagacttattttg-agtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| ||||||||||  || ||||||||||||||| ||||||||||||||| ||||||||    
T  10272089 gtttggatt-gacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgt 10272152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 17752104 - 17752052
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagcttaaaataagt 352  Q
    ||||||||||||||||||||||| ||| | |||| |||||||| |||||||||    
T  17752104 acataaaagtttatttatttacataagctatttttcataagctcaaaataagt 17752052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 19053424 - 19053372
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagcttaaaataagt 352  Q
    ||||||||||||||||||||||| ||| | |||| |||||||| |||||||||    
T  19053424 acataaaagtttatttatttacataagctatttttcataagctcaaaataagt 19053372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 32983217 - 32983269
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||  |||| | ||||||||||||||||||||||||||||||||    
T  32983217 ttttgagcttataaaaaatagcttatgcaaataaataaatttttatgttaatt 32983269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 40240488 - 40240555
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||| ||||||||||||| ||||| |||| | |||||||||||||||||  |||||| ||||||    
T  40240488 gtttggatt-gacttattttgagcttatgaaaaatagcttatgcaaataaataagcttttatcttaatt 40240555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 40581127 - 40581175
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    ||||||||||||||| |||||||||| || |||||||||| ||||||||    
T  40581127 aataatacataaaagcttatttatttgcataagttgttttgcataagct 40581175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 3645339 - 3645269
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacg 364  Q
    ||||||||||||||  ||||||||||||| ||| ||||||| ||||||| ||||||||| ||||| ||||||    
T  3645339 aataatacataaaaacttatttatttacataagctgttttatataagctctaaaataag-ctaatccaaacg 3645269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 10448843 - 10448752
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataag 351  Q
    |||||| | |||||||||| | |||| | ||| ||||||||||||| |  ||||||||| || |||||||||| |||||||| |||||||||    
T  10448843 tgttttttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataagctctaaaataag 10448752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 368
Target Start/End: Complemental strand, 10667458 - 10667359
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagctt-aaaataagtctaattcaaacggatc 368  Q
    |||||||||| | |||| | ||||||||||||||| ||| |||||||||| |  ||||| ||||| |||| ||| |||||||||||| | |||| |||||    
T  10667458 ataaactacattgacaagcttatgaataatacatataagcttatttatttgcgtaagttattttatataaacttcaaaataagtctattccaaatggatc 10667359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 28741335 - 28741281
Alignment:
Q  188 ctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaata 242  Q
    ||||||||||||| |||||||| ||||| |||||||||| ||||||||||||||||    
T  28741335 ctgtttggattag-cttattttagagttcatgcaaaacagcttatgcaaataaata 28741281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 29614230 - 29614171
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagt 352  Q
    ||||||||||||||  ||||||||||||| ||| ||||||| ||||||| ||||||||||    
T  29614230 aataatacataaaaacttatttatttacataagctgttttatataagctctaaaataagt 29614171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 30499934 - 30499996
Alignment:
Q  191 tttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| ||||||||| ||| |||| |||||||  ||||||||||||||||||||||||||    
T  30499934 tttggatta-acttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgt 30499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 30917597 - 30917550
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||| |||||| | ||||||| ||||||||||||||||||||||||||    
T  30917597 tttttagtttaagtaaaacaatttatgcaaataaataaatttttatgt 30917550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 36266280 - 36266210
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacg 364  Q
    |||||||||||||||||||||||||| || ||  ||||||| ||||||| ||||||||| ||||| ||||||    
T  36266280 aataatacataaaagtttatttatttgcataaactgttttatataagctctaaaataag-ctaatccaaacg 36266210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 4257351 - 4257409
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataag 351  Q
    ||||||||||||||  |||||||||| || ||||||||||| ||||||| |||||||||    
T  4257351 aataatacataaaaacttatttatttgcataagttgttttatataagctctaaaataag 4257409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 4257418 - 4257357
Alignment:
Q  192 ttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| |||||||| ||| ||||  |||||||||||||||||||||||| |||||||||    
T  4257418 ttggattag-cttattttagagcttatataaaacaacttatgcaaataaataagtttttatgt 4257357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 53218057 - 53218143
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||| | |||||||||  | |||| | ||||||||||||||||||  |||||||||  || |||||||||| |||||||| ||||    
T  53218057 tgttttttcataaactaccttgacaagcttatgaataatacataaaatcttatttattcgcataagttgttttgcataagctaaaaa 53218143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 2145607 - 2145640
Alignment:
Q  225 aacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||||||||| ||||||||||||||    
T  2145607 aacttatgcaaataaataagtttttatgttaatt 2145640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 22809297 - 22809260
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  22809297 ttttgaggttatgcaaaacagcttatgcaaataaataa 22809260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 26489088 - 26489148
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    |||| ||||||  |||||||||||||| | |||| |||||||| ||||||||||||||||||    
T  26489088 gtttagattaggtttattttgagtttaagtaaaataacttatg-aaataaataaatttttat 26489148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 28623323 - 28623290
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||||||||||||| |||||||||    
T  28623323 aaaacaacttatgcaaataaataagtttttatgt 28623290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 29270401 - 29270344
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| |||||||||   | |||||||||| |||||||| ||||    
T  29270401 tatgaataatacataaaagcttatttattcctataagttgttttgcataagctcaaaa 29270344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30321849 - 30321796
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||| || | ||||||||||||||||||||||| || |||||| ||||||    
T  30321849 gtttggataaggcatattttgagtttatgcaaaacaaattttgcaaacaaataa 30321796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 32901255 - 32901214
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||| ||| |||||||||||||||||| ||||||||||    
T  32901255 cttattttaagtatatgcaaaacaacttatgtaaataaataa 32901214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 33946649 - 33946608
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  33946649 cttattttgagcttatgcaaaatagcttatgcaaataaataa 33946608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 42956124 - 42956157
Alignment:
Q  225 aacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||||||||| ||||||||||||||    
T  42956124 aacttatgcaaataaataagtttttatgttaatt 42956157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 45049319 - 45049352
Alignment:
Q  225 aacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||| |||||||||||||||||||||||||    
T  45049319 aacttatgtaaataaataaatttttatgttaatt 45049352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 20174846 - 20174918
Alignment:
Q  186 gtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||||   ||| ||||||| ||||| |||| | |||||||||||||||||  ||||||| |||||    
T  20174846 gtctgtttggattgagcttcttttgaggttatgaaaaagagcttatgcaaataaataagcttttatgctaatt 20174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 27769705 - 27769622
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtct 354  Q
    |||||||||| | |||| | ||| ||||||| | ||||||| |||||||| || |||||||||| ||||| || |||||||||||    
T  27769705 ataaactacattgacaagcttataaataatata-aaaagttcatttatttgcataagttgttttgcataaactcaaaataagtct 27769622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 34707647 - 34707691
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| |||| |||||| |||||||||||| ||||||||||||||    
T  34707647 ttatgaaaaataacttaagcaaataaataagtttttatgttaatt 34707691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 40581002 - 40581054
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||| ||| |||| | |||||||||||||||||  |||||||||||||    
T  40581002 ttttgagttgatgaaaaatatcttatgcaaataaataagattttatgttaatt 40581054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 19327926 - 19327846
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||    
T  19327926 ataaactaca-ttacaaacttatgaataatacataaaagtttatttatttgcataagttgttttgcataagctaaaaataag 19327846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 16706010 - 16706078
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||||||   |||||||||||||    
T  16706010 gtttggattaggcttattttgagcttatgcaaaacagcttatgcaaataaatacgcttttatgttaatt 16706078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 4326122 - 4326190
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||| ||||||  ||||||||| || |||||| |||||||||||||||||||||| |||||||||||||    
T  4326122 gtttcgattaggtttattttgaattaatgcaatacaacttatgcaaataaataaacttttatgttaatt 4326190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 19327846 - 19327897
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  19327846 cttatttttagcttatgcaaaacaacttatgcaaataaataaacttttatgt 19327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 19328068 - 19328002
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgtt 254  Q
    ||||||||| ||| ||||||||||| ||||||||||||  |||||||||||||| | ||||||||||    
T  19328068 ctgtttggactagtcttattttgagcttatgcaaaacattttatgcaaataaattagtttttatgtt 19328002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 18217196 - 18217256
Alignment:
Q  198 tagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||||||||||||  ||| || ||||||||||||||||| |||||| ||||||    
T  18217196 tagacttattttgagtttatgttaaataatttatgcaaataaataaacttttatattaatt 18217256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 34102806 - 34102742
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatg-caaataaataaatttttatgt 253  Q
    |||||||||||||||||||||| ||||||||||| || ||||| |||||||||||  ||||||||    
T  34102806 gtttggattagacttattttgaatttatgcaaaataatttatgccaaataaataagcttttatgt 34102742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 16706219 - 16706156
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||||  |||||||||    
T  16706219 gtttggattaggtttattttgagcttatgcaaaacggcttatgcaaataaatatgtttttatgt 16706156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 14262504 - 14262434
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||   ||||||||||| ||||  |||| |||||||||||| |||||| ||||||||||||||    
T  14262504 ctgtttggattgagcttattttgagcttataaaaaagaacttatgcaaaaaaataagtttttatgttaatt 14262434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 14942460 - 14942402
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataag 351  Q
    ||||||||| ||||| |||||||| |||| ||||||||||||||||||| |||||||||    
T  14942460 aataatacacaaaagcttatttatatacataagttgttttacataagctctaaaataag 14942402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 16926782 - 16926828
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataag 340  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||    
T  16926782 aataatacattaaagtttatttatttacctaagttgttttacataag 16926828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 13131470 - 13131413
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| |||||||||| || || ||||||| |||||||| ||||    
T  13131470 tatgaataatacataaaagcttatttatttgcataatttgttttgcataagctaaaaa 13131413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 24866873 - 24866929
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | ||||||||||||||||| ||||||| ||||||    
T  24866873 cttattttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaatt 24866929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 28280873 - 28280817
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | ||||||||||||||||| ||||||| ||||||    
T  28280873 cttattttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaatt 28280817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 10213878 - 10213803
Alignment:
Q  183 agagtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||||||| || |  ||||||| ||||| |||| | |||||||||||||||||  || ||||||||||    
T  10213878 agagtctgtttggattggattatttttgagcttatgaaaaatagcttatgcaaataaataagcttgtatgttaatt 10213803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 36187305 - 36187254
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaat 241  Q
    |||||||| |||||||||||||| |||| ||||||| |||||| ||||||||    
T  36187305 gtttggataagacttattttgagcttatacaaaacagcttatgtaaataaat 36187254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 37305333 - 37305258
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaattaatgt 263  Q
    |||||||||||   |||||||| || ||||| |||| ||||||| ||||||| |||| ||||||||||||| ||||    
T  37305333 ctgtttggattgagcttattttaagcttatgaaaaagaacttatacaaataattaaacttttatgttaatttatgt 37305258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 2019768 - 2019715
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  2019768 gtttggatt-gacttattttagagcttatgcaaaacatcttatgcaaataaataa 2019715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 16706117 - 16706219
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattca 360  Q
    |||||| | |||||||||| || ||| | ||||||||||||||||||   ||||||||| || |||  ||||| |||||||| |||||||  ||||| ||    
T  16706117 tgttttttcataaactacattttcaaacttatgaataatacataaaaacatatttatttgcataagccgttttgcataagctcaaaataaacctaatcca 16706216  T
Q  361 aac 363  Q
    |||    
T  16706217 aac 16706219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 18217249 - 18217187
Alignment:
Q  302 ataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacg 364  Q
    |||||||||||||||||| || || || ||| |||||| || |||||||||||| ||||||||    
T  18217249 ataaaagtttatttatttgcataaattatttaacataaactcaaaataagtctatttcaaacg 18217187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 32131423 - 32131469
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatg 252  Q
    ||||||| |||||||||||| |||||||||||||||||  |||||||    
T  32131423 ttttgagcttatgcaaaacagcttatgcaaataaataagcttttatg 32131469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 258
Target Start/End: Original strand, 36194333 - 36194363
Alignment:
Q  228 ttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||||||||||||||||||||||    
T  36194333 ttatgcaaataaataaatttttatgttaatt 36194363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 38195454 - 38195515
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    ||||||||||| |||||||| ||| ||||  |||||||||||||||||||||||| |||||||    
T  38195454 gtttggattag-cttattttagagcttatataaaacaacttatgcaaataaataagtttttat 38195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 218302 - 218370
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaa 362  Q
    |||||||||||||| |||||||||||||| ||   |||||| ||||||| |||||||||| |||||||||    
T  218302 aataatacataaaaatttatttatttacataaaccgttttatataagctataaaataagt-taattcaaa 218370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 694862 - 694930
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaa 362  Q
    |||||||||||||| |||||||||||||| ||   |||||| ||||||| |||||||||| |||||||||    
T  694862 aataatacataaaaatttatttatttacataaaccgttttatataagctataaaataagt-taattcaaa 694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 699071 - 699139
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaa 362  Q
    |||||||||||||| |||||||||||||| ||   |||||| ||||||| |||||||||| |||||||||    
T  699071 aataatacataaaaatttatttatttacataaaccgttttatataagctataaaataagt-taattcaaa 699139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 731925 - 731993
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaa 362  Q
    |||||||||||||| |||||||||||||| ||   |||||| ||||||| |||||||||| |||||||||    
T  731925 aataatacataaaaatttatttatttacataaaccgttttatataagctataaaataagt-taattcaaa 731993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 855821 - 855889
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaa 362  Q
    |||||||||||||| |||||||||||||| ||   |||||| ||||||| |||||||||| |||||||||    
T  855821 aataatacataaaaatttatttatttacataaaccgttttatataagctataaaataagt-taattcaaa 855889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 351
Target Start/End: Original strand, 12607194 - 12607243
Alignment:
Q  302 ataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||| ||||||||||||| ||| | |||| |||||||||||||||||    
T  12607194 ataaaagcttatttatttacataagctatttttcataagcttaaaataag 12607243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 16972263 - 16972327
Alignment:
Q  187 tctgtttggattagactta-ttttgagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    |||||||||||| |||||| ||||||| |||| ||||| | |||||||||||||||||| ||||||    
T  16972263 tctgtttggatt-gacttaattttgagcttattcaaaatagcttatgcaaataaataaacttttat 16972327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 16972403 - 16972460
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||| ||| |||||||||| || || ||||||| |||||||| ||||    
T  16972403 tatgaataatacatacaagcttatttatttgcaaaaattgttttgcataagctaaaaa 16972460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 26047006 - 26047063
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||| ||||||| ||| || ||| || ||||||||||||||||||| ||||||||    
T  26047006 aataataaataaaagcttacttttttgcataagttgttttacataagctcaaaataag 26047063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 9131062 - 9131106
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| |||| | |||||||||||||||||| |||||||||||||    
T  9131062 ttatgaaaaatagcttatgcaaataaataaacttttatgttaatt 9131106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 12607116 - 12607045
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||||||| || | | ||||||| ||||||| ||||||||| |||||||||||||    
T  12607116 aataatacataaaaacttatttatttgcatatgctgttttatataagctctaaaataag-ctaattcaaacgg 12607045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 29218161 - 29218229
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||  |||||||||||| ||||| |||| | |||||| ||||| |||| ||||||| ||||||    
T  29218161 gtttggattgaacttattttgaggttatgaaaaatagcttatgtaaatacataagtttttattttaatt 29218229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 32751136 - 32751168
Alignment:
Q  221 aaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||| ||||||||||||||||||||||||||    
T  32751136 aaacaatttatgcaaataaataaatttttatgt 32751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 34102712 - 34102808
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttattt-acacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    |||||||||| ||| || |  |||||||||||||||||| ||||||||||  || || || |||| |||||  | |||||||||||||| |||||||    
T  34102712 ataaactacatttaaaaactcatgaataatacataaaagcttatttatttggcataaattattttgcataaattcaaaataagtctaatccaaacgg 34102808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 34286609 - 34286641
Alignment:
Q  290 tatgaataatacataaaagtttatttatttaca 322  Q
    ||||||||||||||||||| |||||||||||||    
T  34286609 tatgaataatacataaaagcttatttatttaca 34286641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 38195523 - 38195452
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||| ||||||  |||||||||| || ||||||||||| ||||||| ||||||||| ||||| |||||||    
T  38195523 aataatatataaaaacttatttatttgcataagttgttttatataagctctaaaataag-ctaatccaaacgg 38195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 42102143 - 42102072
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||||||| || ||| ||||||| ||||||| |||||||||| |||| |||||||    
T  42102143 aataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagt-taatccaaacgg 42102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 42102074 - 42102137
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||| ||||||||| ||| ||||  |||||| ||||||||||||||||| |||||||||    
T  42102074 gtttggatta-acttattttagagcttatataaaacagcttatgcaaataaataagtttttatgt 42102137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 1768737 - 1768805
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  1768737 gtttgaattaggcttattttgagtttatgcaaaacagcttatgcaaataaataagtttttaggttaatt 1768805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 37409610 - 37409663
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  37409610 gtttggattagtcttattttgagcgtatgcaaaacaacttatgcaaataaataa 37409663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 21788422 - 21788477
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||||||   |||||||||||||||||||||||| |||||||||||||||||    
T  21788422 ctgtttggattgagcttattttgagtttatgcaaaacatcttatgcaaataaataa 21788477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 33321329 - 33321415
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||| | |||||||||  | |||| | ||||||||| ||||||||| |||||||||| ||||||||||||| |||||||| ||||    
T  33321329 tgttttttcataaactaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgcataagctcaaaa 33321415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 23956371 - 23956318
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||| |||||||| || |||||||||||| |||||||||||||||||    
T  23956371 gtttggattaggcttattttaagcttatgcaaaacagcttatgcaaataaataa 23956318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 15155849 - 15155791
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataag-cttaaaataag 351  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||| |||||||||||    
T  15155849 aataatacataaaagcatatttattttcataagttgttttacataagccttaaaataag 15155791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 4090529 - 4090472
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||||||||||| ||||||||||||||| || ||| |||||| |||||||| ||||    
T  4090529 tatgaataatacatcaaagtttatttatttgcataagctgttttgcataagctcaaaa 4090472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 735955 - 735907
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    ||||||||||||||| |||||| |||||||||||| |||| ||||||||    
T  735955 aataatacataaaagcttatttgtttacacaagttattttgcataagct 735907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 23956177 - 23956242
Alignment:
Q  189 tgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||| ||||| ||||||||||| ||||||||     ||||||||||||||||| ||||||||||||||    
T  23956177 tgtttgcattaggcttattttgagcttatgcaag----cttatgcaaataaataagtttttatgttaatt 23956242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 29774784 - 29774728
Alignment:
Q  291 atgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||| ||||||||||||||||||| || |||||||| | |||||||| ||||    
T  29774784 atgaataatgcataaaagtttatttatttgcataagttgttatgcataagctaaaaa 29774728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 34913436 - 34913488
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    ||||||||||||||||||| |||||||||| || ||| |||||| ||||||||    
T  34913436 tatgaataatacataaaagcttatttatttgcataagctgttttgcataagct 34913488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 35515417 - 35515473
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||| |||||||| |||| | ||||| ||||||||||||||||||| ||||||    
T  35515417 cttattttaagtttatgaaaaagagcttatacaaataaataaatttttatcttaatt 35515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 4090472 - 4090519
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| |||||||||||| |||||||||||||||||| ||| ||||    
T  4090472 ttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgt 4090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 9140848 - 9140785
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||| || ||||||||||| |||| ||||||| | |||||||||||||||  ||||||||    
T  9140848 gtttggatcaggcttattttgagcttatacaaaacatcgtatgcaaataaataaccttttatgt 9140785  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 23956318 - 23956373
Alignment:
Q  310 ttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    |||||||||| || ||| |||||| ||||||||||||||||| ||||| |||||||    
T  23956318 ttatttatttgcataagctgttttgcataagcttaaaataagcctaatccaaacgg 23956373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 33321415 - 33321368
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| |||||||||||||||| |||||||||||||  ||||||||    
T  33321415 ttttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgt 33321368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 33321498 - 33321459
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  33321498 ttatgcaaaacaacttatgcaaataattaagtttttatgt 33321459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 2790174 - 2790136
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaa 244  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  2790174 ttttgagcttatgcaaaacagcttatgcaaataaataaa 2790136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 7481025 - 7480968
Alignment:
Q  186 gtctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||||  |||||||||| ||  ||||||||||||||||||||||||||||||    
T  7481025 gtctgtttggatc-gacttatttttgaacttatgcaaaacaacttatgcaaataaataa 7480968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 29774736 - 29774774
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatg 252  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  29774736 ttatgcataacaacttatgcaaataaataaacttttatg 29774774  T

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Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 38215990 - 38216043
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  38215990 gtttggatt-gacttatttttgagcttatgcaaaacagcttatgcaaataaataa 38216043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 38471911 - 38471858
Alignment:
Q  189 tgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaata 242  Q
    |||||||||||| |||||||| ||| |||||||||||| ||||||||||||||||    
T  38471911 tgtttggattag-cttattttcgagcttatgcaaaacagcttatgcaaataaata 38471858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 446488 - 446416
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgga 366  Q
    ||||||| ||||||  |||||||||| || ||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  446488 aataatatataaaaacttatttatttgcataagttgttttatataagctataaaataag-ctaatccaaacgga 446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 351
Target Start/End: Complemental strand, 21788497 - 21788436
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||||||| ||||||| |||||||||| || ||| |||||| ||||| || ||||||||    
T  21788497 tatgaataataaataaaagcttatttatttgcataagatgttttgcataaactcaaaataag 21788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 22898476 - 22898412
Alignment:
Q  189 tgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||| |||||||| ||| ||||  |||| |||||||||||||||||| ||||||||||    
T  22898476 tgtttggattag-cttattttagagcttatataaaataacttatgcaaataaatacatttttatgt 22898412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 27703504 - 27703561
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||| ||||||| |||||||||| || ||| |||||| |||||||| ||||    
T  27703504 tatgaataatatataaaagcttatttatttgcataagctgttttgcataagctcaaaa 27703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 27703561 - 27703524
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  27703561 ttttgagcttatgcaaaacagcttatgcaaataaataa 27703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 32366116 - 32366180
Alignment:
Q  189 tgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||| |||||||| ||| ||||  |||| ||||||||||||||||||| |||||||||    
T  32366116 tgtttggattag-cttattttagagcttatataaaataacttatgcaaataaataagtttttatgt 32366180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 32522095 - 32522152
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataa 350  Q
    ||||||||||||||  ||||||||||||| ||| ||||||| ||||||| ||||||||    
T  32522095 aataatacataaaaacttatttatttacataagctgttttatataagctctaaaataa 32522152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 34913491 - 34913446
Alignment:
Q  208 ttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||| |||||||||||| |||||||||||||||||  ||||||||    
T  34913491 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgt 34913446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 41554626 - 41554655
Alignment:
Q  290 tatgaataatacataaaagtttatttattt 319  Q
    ||||||||||||||||||||||||||||||    
T  41554626 tatgaataatacataaaagtttatttattt 41554655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 43787849 - 43787878
Alignment:
Q  290 tatgaataatacataaaagtttatttattt 319  Q
    ||||||||||||||||||||||||||||||    
T  43787849 tatgaataatacataaaagtttatttattt 43787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 2401740 - 2401677
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||||| |||||||||||||||| ||||||||||    
T  2401740 gtttggattag-cttattttagagcttatataaaacagcttatgcaaataaatatatttttatgt 2401677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 12442978 - 12442910
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||  | |||||||| ||||| |||||| |||||||| ||||||||  ||||| |||||||    
T  12442978 gtttggattagcttaattttgagcttatgaaaaacagcttatgcagataaataagcttttaagttaatt 12442910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 15155977 - 15155921
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | |||||| |||||||||| ||||||| ||||||    
T  15155977 cttattttgagcttatgaaaaagagcttatgaaaataaataagtttttatcttaatt 15155921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 22788189 - 22788141
Alignment:
Q  186 gtctgtttggattagacttattttgagtttatgcaaaacaacttatgca 234  Q
    |||||||||||| ||||||| ||||| | |||| |||||||||||||||    
T  22788189 gtctgtttggataagacttactttgaatctatgtaaaacaacttatgca 22788141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 29133713 - 29133773
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataa 350  Q
    ||||||||||||||||||| |||||||||| || ||  | ||||| ||||||| |||||||    
T  29133713 tatgaataatacataaaagattatttatttgcataaactattttatataagctcaaaataa 29133773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 33321238 - 33321290
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| | ||||||||||||||||||  ||||||||||||    
T  33321238 ttttgagcttatgtaaaatagcttatgcaaataaataaacctttatgttaatt 33321290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 40301319 - 40301382
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||||| ||||||||||||||||| |||||||||    
T  40301319 gtttggattag-cttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgt 40301382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 58894 - 58989
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    |||||||||| | |||| | || |||||||||||||| |||||||||||| |||||| | |||| |||||||| |||||||| |||||||||||||    
T  58894 ataaactacattgacaaacttaagaataatacataaacgtttatttatttccacaaggttttttgcataagctcaaaataagcctaattcaaacgg 58989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 46501027 - 46501122
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    |||||||||||| |||| | ||| ||||||||| ||||| | ||||||||||| || |||||||| ||||||| ||||||||||| ||||||||||    
T  46501027 ataaactacaatgacaagcttataaataatacaaaaaagctcatttatttacataaattgttttatataagctcaaaataagtcttattcaaacgg 46501122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 351
Target Start/End: Complemental strand, 46473133 - 46473073
Alignment:
Q  291 atgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    |||||||||| ||||||| ||||||||||||||||| |||||| |||||||| ||||||||    
T  46473133 atgaataataaataaaagcttatttatttacacaagctgttttgcataagctcaaaataag 46473073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 16708976 - 16708907
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||  ||||||||||| ||||| |||| |  |||||||||||||||||||||||||||||||    
T  16708976 ctgtttggattaagcttattttgagcttatgaaaaagat-ttatgcaaataaataaatttttatgttaatt 16708907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 20169416 - 20169372
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  20169416 ttatgcaaaacagcttatgcaaataaataagtttttatgttaatt 20169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 46263577 - 46263505
Alignment:
Q  186 gtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||||  |||||||||||||||| | ||||   ||||| ||||||||||||||||||| ||||||    
T  46263577 gtctgtttggattgaacttattttgagtttacgaaaaaatgcttatacaaataaataaatttttatattaatt 46263505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 17348847 - 17348908
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||||||||||||| |||||||    
T  17348847 gtttggattag-cttattttagagtttatataaaacaacttatgcaaataaataagtttttat 17348908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 20169232 - 20169294
Alignment:
Q  191 tttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||  ||||||||||| ||||| |||||| |||||||||||||||||  ||||||||    
T  20169232 tttggattaagcttattttgagcttatgaaaaacagcttatgcaaataaataagcttttatgt 20169294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 20169333 - 20169243
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    |||||| | |||||||| | ||| || | ||| ||||||||||||||| |||||||||| || ||| |||||| |||||||| ||||||||    
T  20169333 tgttttttcataaactatatttaaaaacttataaataatacataaaagcttatttatttgcataagctgtttttcataagctcaaaataag 20169243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 22593319 - 22593385
Alignment:
Q  192 ttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||  ||||| | ||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  22593319 ttggattaagcttatctggagcttatgcaaaacagcttatgcaaataaataagcttttatgttaatt 22593385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 36259308 - 36259398
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    |||||| | |||||||||| ||||||   || ||||||||||||||| |||||||||||||| || ||||  | |||||| ||||||||||    
T  36259308 tgttttttcataaactacacttacaaagttaagaataatacataaaaatttatttatttacataaattgtactgcataagtttaaaataag 36259398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 6900689 - 6900625
Alignment:
Q  188 ctgtttggattagactta-ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatg 252  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||| | |||||||    
T  6900689 ctgtttggatt-gacttacttttgagattatgcaaaacgacttatgcaaataaatacacttttatg 6900625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 35590162 - 35590113
Alignment:
Q  298 atacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||| |||||||||| || ||||||||||||||||||| ||||    
T  35590162 atacataaaagcttatttatttgcataagttgttttacataagctaaaaa 35590113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 35897718 - 35897681
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    |||||||||||||||||||||||||||||| |||||||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttat 35897681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 15791420 - 15791349
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  ||||||||||||| ||| ||||||| ||||||| |||||||||| |||| |||||||    
T  15791420 aataatacataaaaacttatttatttacataagctgttttatataagctctaaaataagt-taatccaaacgg 15791349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 37329338 - 37329390
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| |||||||||||||||||||  |||||||||||||    
T  37329338 ttttgagcttatgaaaaataacttatgcaaataaataagcttttatgttaatt 37329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 10082233 - 10082280
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||    
T  10082233 ttttgagtttttgtgaaacaacttatgcaaataaataagtttttatgt 10082280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 35590086 - 35590160
Alignment:
Q  179 attaagagtctgtttggattagacttattttg-agtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||| ||||| ||||||| ||||||||||  || ||||| ||||||||||||||||||||||||  ||||||||    
T  35590086 attaagggtctggttggatt-gacttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgt 35590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 37712245 - 37712175
Alignment:
Q  188 ctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| |||||||||| ||| ||| | |||| | |||||||||||||||||| |||||||||||||    
T  37712245 ctgtttggatt-gacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgttaatt 37712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 3116150 - 3116116
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgtt 254  Q
    |||||| ||||||||||||||||||||||||||||    
T  3116150 aaaacagcttatgcaaataaataaatttttatgtt 3116116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 4068184 - 4068098
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||| | |||||||||  | |||| | ||||||||||||||||||| |||||||||| |||||| | |||| || ||||| ||||    
T  4068184 tgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcacaagctattttgcaaaagctaaaaa 4068098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 36259205 - 36259247
Alignment:
Q  180 ttaagagtctgtttggattagacttattttgagtttatgcaaa 222  Q
    |||||||||||||||||||||  |||||||||| |||||||||    
T  36259205 ttaagagtctgtttggattaggtttattttgagcttatgcaaa 36259247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 49971217 - 49971270
Alignment:
Q  189 tgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaata 242  Q
    ||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  49971217 tgtttagattag-cttattttagagcttatgcaaaacaacttatgcaaataaata 49971270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 391151 - 391188
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  391151 ttttgaggttatgcaaaacagcttatgcaaataaataa 391188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 6337773 - 6337834
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttaca 322  Q
    |||||| | |||||||||  | |||| | ||||||||||||||||||| |||||||||||||    
T  6337773 tgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttaca 6337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 8845330 - 8845375
Alignment:
Q  213 tttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||| |||| |||||| | |||||||||||||||||||||||||    
T  8845330 tttatgaaaaataacttacgtaaataaataaatttttatgttaatt 8845375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 10365207 - 10365154
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||||| |||| || || || ||||||||||||| ||||    
T  10365207 aataatacataaaagtttattcatttgcataaattattttacataagctgaaaa 10365154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 16225471 - 16225539
Alignment:
Q  185 agtctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||| ||||||||| |||||||||| ||| ||||||||||||  ||||| |||||||||| |||||||||    
T  16225471 agtccgtttggatt-gacttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgt 16225539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 35897669 - 35897726
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||| ||||||  |||||||||| || |||||||||| ||||| |||||||    
T  35897669 tatgaataataaataaaaacttatttatttgcataagttgttttgcataaccttaaaa 35897726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 3116117 - 3116180
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaac 363  Q
    |||||||| ||||||||||| || ||| ||||||| ||||||| ||||||||| |||||||||||    
T  3116117 acataaaaatttatttatttgcataagctgttttatataagctataaaataag-ctaattcaaac 3116180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 5347122 - 5347185
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||| |||||||||||||||||| ||||||||||    
T  5347122 gtttggattag-cttattttagagcttatataaaataacttatgcaaataaatacatttttatgt 5347185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 13039111 - 13039055
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||  ||||| |||| | |||||||||||||||||| |||||| ||||||    
T  13039111 cttattttgaacttatgaaaaatagcttatgcaaataaataaacttttatattaatt 13039055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 14460947 - 14461019
Alignment:
Q  186 gtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||| |||||||   ||||||||||  ||||||||| |  ||| ||||||||| |||||||||||||||||    
T  14460947 gtctgtctggattaagtttattttgagcctatgcaaaatagtttacgcaaataaacaaatttttatgttaatt 14461019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 15235083 - 15235139
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | |||||| |||||||||| ||||||| ||||||    
T  15235083 cttattttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatt 15235139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 18327491 - 18327554
Alignment:
Q  190 gtttggattagacttattttg-agtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| ||||||||||| | ||||| ||||||| |||||||||||||||||  ||||||||    
T  18327491 gtttggatt-gacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgt 18327554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 19284932 - 19284861
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    |||||||||||| || ||||||||||| | ||| ||||||| ||||||| |||| ||||| ||||||||||||    
T  19284932 aataatacataatagcttatttatttatataagctgttttatataagctctaaagtaagt-taattcaaacgg 19284861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 22593434 - 22593482
Alignment:
Q  271 taaactacaattacaatcgtatgaataatacataaaagtttatttattt 319  Q
    |||||| || |||||| | |||||||||||||||||| |||||||||||    
T  22593434 taaactgcatttacaagcttatgaataatacataaaaatttatttattt 22593482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 25485924 - 25485856
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||  | ||||||||  |||||  ||| | ||||||||||||||||||||||||| ||||||    
T  25485924 gtttggattaagcatattttgaacttatgagaaagagcttatgcaaataaataaatttttatattaatt 25485856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 28690164 - 28690112
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| | |||||||||||||||||  |||||||||||||    
T  28690164 ttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaatt 28690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 41003381 - 41003417
Alignment:
Q  217 tgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  41003381 tgcaaaaaaacttatgcaaataaataagtttttatgt 41003417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 47413532 - 47413480
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| | |||||||||||||||||  |||||||||||||    
T  47413532 ttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaatt 47413480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 357
Target Start/End: Complemental strand, 30534040 - 30533953
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaat 357  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||||||| || ||| |||||| || ||||| |||||||| |||||    
T  30534040 ataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgcacaagctcaaaataagcctaat 30533953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 22816495 - 22816563
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||  ||||||||||| ||| ||||||||  |||||||||||||||| ||||||||||||||    
T  22816495 gtttggattatgcttattttgagcttaagcaaaacagtttatgcaaataaataagtttttatgttaatt 22816563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 4272351 - 4272412
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||| |||||  |||||||| |||||||| |||||||||||||||| |||||||||    
T  4272351 gtttggattagatttatt--gagtttatacaaaacaatttatgcaaataaataactttttatgt 4272412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 30533950 - 30534010
Alignment:
Q  193 tggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||| ||||||||||| || ||||||||| |||||||||||||||||  ||||||||    
T  30533950 tggattaggcttattttgagcttgtgcaaaacagcttatgcaaataaataagcttttatgt 30534010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 9582574 - 9582512
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| ||| |||||| || ||||||| || |||||||||||||||||||||||||||||    
T  9582574 gtttggatt-gacatatttttagcttatgcagaataacttatgcaaataaataaatttttatgt 9582512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 34413495 - 34413432
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||| | ||||||||||||||||||||||||||||||   ||||| ||||| ||||||||    
T  34413495 gtttggataaaacttattttgagtttatgcaaaacaacttagataaatagataaacttttatgt 34413432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 21609977 - 21610027
Alignment:
Q  208 ttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  21609977 ttgagcttatgcaaaacaatttatgcaaataaataagtttttattttaatt 21610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 10054441 - 10054392
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttattt 319  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||||||||    
T  10054441 ataaactacatttacaaacttatgaataatacataaaagcttatttattt 10054392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 21871333 - 21871378
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataa 339  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||    
T  21871333 aataatacataaaagtttacttatttgcataagttgttttacataa 21871378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 2040232 - 2040284
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    ||||||||||| ||||||| ||||||||||| | |||||||||| ||||||||    
T  2040232 tatgaataataaataaaagcttatttatttatataagttgttttgcataagct 2040284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 6758612 - 6758647
Alignment:
Q  208 ttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6758612 ttgagcttatgcaaaacaacttatgcaaataaataa 6758647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 21871386 - 21871339
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||| |||||||| |||||||||||||||||||| |||| ||||||||    
T  21871386 tttttagtttatgtaaaacaacttatgcaaataagtaaacttttatgt 21871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 29623578 - 29623543
Alignment:
Q  208 ttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||| ||||||||||||||||||||||||||||||    
T  29623578 ttgagcttatgcaaaacaacttatgcaaataaataa 29623543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 2027096 - 2027154
Alignment:
Q  200 gacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||| || ||||| |||| | |||||||||||| ||||| |||||||||||||    
T  2027096 gacttatttttagcttatgaaaaatagcttatgcaaatagataaacttttatgttaatt 2027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 6632625 - 6632678
Alignment:
Q  189 tgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaata 242  Q
    |||||||||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  6632625 tgtttggattag-cttattttagagcttattcaaaacaacttatgcaaataaata 6632678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 715975 - 716047
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagc-ttaaaataagtctaattcaaacgga 366  Q
    ||||||||||| ||  ||||||||||||| |||||| ||| ||||||| |||||||||||| ||| ||||||||    
T  715975 aataatacatagaaacttatttatttacataagttgatttgcataagctttaaaataagtc-aatccaaacgga 716047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 29623400 - 29623441
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||||||||| |||| | |||||||||||||||||    
T  29623400 cttattttgagtttatgaaaaatagcttatgcaaataaataa 29623441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 32675818 - 32675867
Alignment:
Q  209 tgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||| ||||| |||| ||||||||||||||||||| ||||||| ||||||    
T  32675818 tgagcttatgaaaaataacttatgcaaataaataagtttttatattaatt 32675867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 1468212 - 1468141
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||||||| || ||| | ||||| ||||||| ||||||||| |||||||||||||    
T  1468212 aataatacataaaaacttatttatttgcataagctattttatataagctctaaaataag-ctaattcaaacgg 1468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 4272451 - 4272379
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgtttt 333  Q
    |||||| |||||||||||| ||| || | |||| |||||||||||||  |||||||||| || || |||||||    
T  4272451 tgtttttttataaactacatttataaacttatgtataatacataaaaagttatttatttgcataaattgtttt 4272379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 7267926 - 7267890
Alignment:
Q  222 aacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||||||||||||  |||||||||||||    
T  7267926 aacaacttatgcaaataaataagcttttatgttaatt 7267890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 17300826 - 17300794
Alignment:
Q  221 aaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||||||||||||||| |||||||||    
T  17300826 aaacaacttatgcaaataaataagtttttatgt 17300794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 17914913 - 17914976
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||| ||||||||| ||| ||||  |||||| |||||||||||||||| ||||||||||    
T  17914913 gtttggatta-acttattttagagcttatataaaacagcttatgcaaataaatacatttttatgt 17914976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 20776514 - 20776462
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||  |||| |||| |||||||||||||||||||| ||||||| |||||    
T  20776514 ttttgagcatatgaaaaataacttatgcaaataaataaacttttatgataatt 20776462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 23239287 - 23239227
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataa 350  Q
    ||||||||||| ||||||| ||||||||||  | ||||| |||| |||||||| |||||||    
T  23239287 tatgaataataaataaaagcttatttatttgtataagttatttttcataagctcaaaataa 23239227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 32615464 - 32615535
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||||||| || ||| ||||||| ||||||| |||||||||| |||| |||||||    
T  32615464 aataatacataaaaacttatttatttgcataagctgttttatataagctataaaataagt-taatccaaacgg 32615535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 34801095 - 34801127
Alignment:
Q  290 tatgaataatacataaaagtttatttatttaca 322  Q
    ||||||||||| |||||||||||||||||||||    
T  34801095 tatgaataataaataaaagtttatttatttaca 34801127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 12473174 - 12473236
Alignment:
Q  191 tttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  12473174 tttggattaggtttattttgagcttatgcaaaacaacttatgcaaacaaataagtttttatgt 12473236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 23120039 - 23119986
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||| || ||||||||||| |||||||||||||| |||||||||||||||    
T  23120039 gtttggataaggcttattttgagcttatgcaaaacaacctatgcaaataaataa 23119986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 9534016 - 9534060
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  9534016 ttatgcaaaacaatttatgcaaataaataagtttttatgttaatt 9534060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 9546430 - 9546497
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaat 357  Q
    |||||||||||||||||| ||||||||||| || || || |||||||||| ||  |||||||||||||    
T  9546430 tatgaataatacataaaactttatttatttgcataaattattttacataacctcgaaataagtctaat 9546497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 9546507 - 9546440
Alignment:
Q  186 gtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||| || ||||||||||||| ||| ||||| |||| || ||||||||||||||||| ||||||||    
T  9546507 gtctgtatgtattagacttatttcgaggttatgtaaaataatttatgcaaataaataaagttttatgt 9546440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 21249139 - 21249186
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  21249139 ttttgcgtttatgcaaaactacttatgcaaataaataagtttttatgt 21249186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 38654287 - 38654228
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaattttt 249  Q
    |||||||| ||||||||| ||||||||| || ||||||||||| |||||||||| |||||    
T  38654287 gtttggataagacttattatgagtttatacagaacaacttatgaaaataaataagttttt 38654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 41677434 - 41677371
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgtttt 333  Q
    |||||||||| | |||| | |||||||||||||||||| ||||||||||| || ||||||||||    
T  41677434 ataaactacattgacaaacttatgaataatacataaaaatttatttatttgcataagttgtttt 41677371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 22032727 - 22032792
Alignment:
Q  188 ctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||  |||||||||    
T  22032727 ctgtttggattag-cttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgt 22032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 23119947 - 23120041
Alignment:
Q  271 taaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaacgg 365  Q
    ||||||||| | |||| | |||||||||||| | |||| |||||||||| || | |||||||| |||||||| |||||||| || || |||||||    
T  23119947 taaactacattgacaaacttatgaataatactttaaagattatttatttgcataggttgttttgcataagctcaaaataagccttatccaaacgg 23120041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 27811458 - 27811508
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagcttaaaataa 350  Q
    |||||||| |||| ||||||||| ||||| |||||||||||||||||||||    
T  27811458 acataaaattttaattatttacataagttattttacataagcttaaaataa 27811508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 34922998 - 34922928
Alignment:
Q  263 ttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgtttt 333  Q
    |||| |||||||||||  | |||| | ||||||||||||||||||| |||||||||| || ||||||||||    
T  34922998 tttttttataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagttgtttt 34922928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 41677370 - 41677404
Alignment:
Q  219 caaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||||||||||||||||||||||||    
T  41677370 caaaacaacttatgcaaataaataaatttttatgt 41677404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 12473255 - 12473186
Alignment:
Q  281 ttacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataa 350  Q
    |||||| | ||||||||||||||||||  |||||| ||| || |||||||||| |||||||| |||||||    
T  12473255 ttacaaacttatgaataatacataaaaacttatttgtttgcataagttgttttgcataagctcaaaataa 12473186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 29390576 - 29390645
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataa 339  Q
    |||||||||  |||||| | |||||||||||||| |||| |||||||||| || |||||||||| |||||    
T  29390576 ataaactacctttacaagcttatgaataatacatcaaagattatttatttgcataagttgttttccataa 29390645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 29390653 - 29390616
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  29390653 ttttgagtttatggaaaacaacttatgcaaataaataa 29390616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 16958783 - 16958846
Alignment:
Q  190 gtttggattagactta-ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||| ||||||| ||||  |||||||||||||||| |||||||||||||||||    
T  16958783 gtttggattag-cttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgt 16958846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 20888734 - 20888682
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| ||||||||||||||| ||| ||||||||||||||    
T  20888734 ttttgagcttatgaaaaataacttatgcaaataagtaagtttttatgttaatt 20888682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 22032926 - 22032870
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | ||||||||||||||||| ||||||| ||||||    
T  22032926 cttattttgagcttatgaaaaaaagcttatgcaaataaataagtttttatcttaatt 22032870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 35331109 - 35331164
Alignment:
Q  190 gtttggattagacttattttg-agtttatgcaaaacaacttatgcaaataaataaat 245  Q
    ||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||    
T  35331109 gtttggatt-gacttattttgtagcttatgcaaaacagcttatgcaaataaataaat 35331164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 19913909 - 19913975
Alignment:
Q  187 tctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||| |||||||| ||| ||||  |||| |||||||| ||||||||||||||||||||    
T  19913909 tctgtttggattag-cttattttagagcttatataaaataacttatgtaaataaataaatttttatgt 19913975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 22032831 - 22032740
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataag 351  Q
    |||||| | |||||||||| | |||  | ||| ||||||||||||||   ||||||||| || ||||||||||||||||||| |||||||||    
T  22032831 tgttttttcataaactacattaacatgcttataaataatacataaaaacatatttatttgcataagttgttttacataagctctaaaataag 22032740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 38372524 - 38372578
Alignment:
Q  189 tgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||    
T  38372524 tgtttggatt-gacttatttttgagcttatgcaaaacagcttatgcaaataaataa 38372578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 1312228 - 1312278
Alignment:
Q  302 ataaaagtttatttatttacacaagttgttttacataagcttaaaataagt 352  Q
    ||||||||||||||||||||| ||| | |||| |||||||| |||||||||    
T  1312228 ataaaagtttatttatttacataagctatttttcataagctcaaaataagt 1312278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 10412927 - 10412869
Alignment:
Q  193 tggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    |||||||  ||||||||||  ||||| ||||||| |||||||||||||||| |||||||    
T  10412927 tggattatgcttattttgaacttatgtaaaacaatttatgcaaataaataagtttttat 10412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 48021755 - 48021713
Alignment:
Q  201 acttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||||||| |||| |||||||| ||||||||||||||||    
T  48021755 acttattttgagcttatacaaaacaatttatgcaaataaataa 48021713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 258
Target Start/End: Original strand, 49104316 - 49104346
Alignment:
Q  228 ttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||||||||||||||||||||||    
T  49104316 ttatgcaaataaataaatttttatgttaatt 49104346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 1312278 - 1312221
Alignment:
Q  201 acttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||| ||||| |||| | |||||| ||||||||||| |||||| ||||||    
T  1312278 acttattttgagcttatgaaaaatagcttatgtaaataaataaacttttattttaatt 1312221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 16958852 - 16958799
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||||||||||| |||||||| || || ||||||||||| ||||||| ||||    
T  16958852 aataatacataaaaatttatttagttgcataagttgttttatataagctcaaaa 16958799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 18251418 - 18251467
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    ||||||||||||||||| |||| ||| ||| ||||||||||| |||||||    
T  18251418 cttattttgagtttatgaaaaaaaacatatacaaataaataagtttttat 18251467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 19913975 - 19913907
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacggatc 368  Q
    |||||||| |||||||||||||| ||||| ||||| ||||||| ||||||||| ||||| ||||| ||||    
T  19913975 acataaaaatttatttatttacataagttattttatataagctctaaaataag-ctaatccaaacagatc 19913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 29378821 - 29378753
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||| |||||||||| ||||||||| |||| | |||||||||||||||||  ||||| |||||||    
T  29378821 gtttggatt-gacttatttttgagtttatgaaaaatagcttatgcaaataaataagcttttacgttaatt 29378753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 35246669 - 35246702
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||||||||||||| |||||||||    
T  35246669 aaaacaacttatgcaaataaataagtttttatgt 35246702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 38372598 - 38372541
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    |||||||||||||||| || |||||||||| || ||| |||||| |||||||| ||||    
T  38372598 tatgaataatacataagagcttatttatttgcataagctgttttgcataagctcaaaa 38372541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 38789558 - 38789611
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaat 241  Q
    |||||||||||||  | |||||||||||||| ||||||| ||||| ||||||||    
T  38789558 ctgtttggattagtataattttgagtttatgtaaaacaatttatgtaaataaat 38789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 342
Target Start/End: Original strand, 44613490 - 44613571
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    |||||| | |||||||||  | |||| | ||||||||||| ||||||| |||||||||| || ||| |||||| ||||||||    
T  44613490 tgttttttcataaactaccttaacaagcttatgaataataaataaaagcttatttatttgcataagctgttttgcataagct 44613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 14676077 - 14676026
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaata 242  Q
    ||||||||||| ||||||| ||| ||||  |||||||||||||||||||||||    
T  14676077 gtttggattag-cttatttagagcttatataaaacaacttatgcaaataaata 14676026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 16933048 - 16932985
Alignment:
Q  190 gtttggattagactta-ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||| ||||||| ||||  |||| ||||||||||| |||||||||||||||||    
T  16933048 gtttggattag-cttatttttgagcttatataaaataacttatgcaactaaataaatttttatgt 16932985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 16938431 - 16938368
Alignment:
Q  190 gtttggattagactta-ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||| ||||||| ||||  |||| ||||||||||| |||||||||||||||||    
T  16938431 gtttggattag-cttatttttgagcttatataaaataacttatgcaactaaataaatttttatgt 16938368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 22575622 - 22575551
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||   ||||||||| || ||| ||||||||||||||| |||||||||| |||| |||||||    
T  22575622 aataatacataaaaacgtatttatttgcataagatgttttacataagctctaaaataagt-taatccaaacgg 22575551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 22575553 - 22575616
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||  |||||||||    
T  22575553 gtttggatta-acttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgt 22575616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 25908454 - 25908402
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| ||||   ||||||||||||||||| ||||||||||||||    
T  25908454 ttttgaggttatgaaaaatggcttatgcaaataaataagtttttatgttaatt 25908402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 35246708 - 35246637
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgg 365  Q
    ||||||||||||||  |||||||||| || ||||||||||| ||| ||| ||||||||| ||||| |||||||    
T  35246708 aataatacataaaaacttatttatttgcataagttgttttatataggctctaaaataag-ctaatccaaacgg 35246637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 351
Target Start/End: Complemental strand, 39392690 - 39392627
Alignment:
Q  290 tatgaataatacataaaagttta--tttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||||||| |||||||||||  ||| ||| || ||||||||||||||| ||| ||||||||    
T  39392690 tatgaataataaataaaagtttatttttttttgcataagttgttttacataggctcaaaataag 39392627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 44834917 - 44834961
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| |||| |||||||||||||||||||| ||| |||||||||    
T  44834917 ttatgaaaaataacttatgcaaataaataaactttaatgttaatt 44834961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 14987508 - 14987578
Alignment:
Q  188 ctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||| ||||||| ||||||    
T  14987508 ctgtttggattggacttattttgagtttatgaaaaacagcttatataaataaataagtttttatattaatt 14987578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 366
Target Start/End: Original strand, 10794959 - 10795031
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgga 366  Q
    ||||||||||||||  ||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||    
T  10794959 aataatacataaaaacttatttatttacacaagctgttttgcataagctctaaaataagtc-aattcaaacgga 10795031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 10796422 - 10796350
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgga 366  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||||    
T  10796422 aataatacataaaaacttatttatttacacaagttgttttgcataagctctaaaataag-ccaattcaaacgga 10796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 27368169 - 27368270
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattca 360  Q
    |||||| | |||| ||||| | |||| | ||||||||||| ||||||| |||||||||| || ||||||||||||||||| | |||||||| ||||| ||    
T  27368169 tgttttttcataagctacattgacaaacttatgaataatatataaaagcttatttatttgcataagttgttttacataagttcaaaataagcctaatcca 27368268  T
Q  361 aa 362  Q
    ||    
T  27368269 aa 27368270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 9319022 - 9319086
Alignment:
Q  189 tgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| || | ||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  9319022 tgtttgggttcggcttattttgagcttatgcaaaacaacttatacaaataaataagtttttatgt 9319086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 40699341 - 40699386
Alignment:
Q  208 ttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  40699341 ttgagcttatgcaaaacagcttatgcaaataaataaatttttatgt 40699386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 43415316 - 43415408
Alignment:
Q  271 taaactacaattacaatcgtatgaataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaac 363  Q
    ||||||||| | |||| | ||||||||||||||||||  |||||||||| || |||||||||||| ||||||  |||||||||| |||||||||    
T  43415316 taaactacattaacaaccttatgaataatacataaaaacttatttatttgcagaagttgttttacttaagctcaaaaataagtc-aattcaaac 43415408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 27368270 - 27368218
Alignment:
Q  191 tttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  27368270 tttggattaggcttattttgaacttatgtaaaacaacttatgcaaataaataa 27368218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 31736432 - 31736484
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagct 342  Q
    |||||||| ||||||||| |||||||||||||| |||||||||| ||||||||    
T  31736432 tatgaatagtacataaaattttatttatttacataagttgttttgcataagct 31736484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 34633390 - 34633430
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgtt 254  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  34633390 ttatgcaaaacaacttatgcaaataaataaacttttatgtt 34633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 4331489 - 4331438
Alignment:
Q  207 tttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||||||    
T  4331489 tttgagtttatgaaaaataacttatgtaaataaataagtttttatgttaatt 4331438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 897039 - 896981
Alignment:
Q  261 tgttttattataaactacaattacaatcgtatgaataatacataaaagtttatttattt 319  Q
    |||||| | |||||||||| | |||| | ||||||||||||||||||||||||||||||    
T  897039 tgttttttcataaactacattgacaagcttatgaataatacataaaagtttatttattt 896981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 43213455 - 43213493
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  43213455 aaaataacttatgcaaataaataaatttttatgttaatt 43213493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 3564260 - 3564203
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||| |||||||||||||||||| || ||| |||||| |||||||| ||||    
T  3564260 tatgaataatatataaaagtttatttattttcataagctgttttgcataagctcaaaa 3564203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 15184583 - 15184511
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacgga 366  Q
    ||||||||||||||  ||||||||||||| ||| ||||||| ||||||| |||||||||| |||| ||||||||    
T  15184583 aataatacataaaaacttatttatttacataagctgttttatataagctctaaaataagt-taatccaaacgga 15184511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 19298223 - 19298190
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||||||||||||||||||||||||||    
T  19298223 aaaacaacttatgcaaataaataaatttttatgt 19298190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 29877679 - 29877622
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| |||||||||| || || ||||||| |||||||| ||||    
T  29877679 tatgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaaaa 29877622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 34633435 - 34633382
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||| |||||||||||||||||||| || |||||||||| |||||||| ||||    
T  34633435 aataaaacataaaagtttatttatttgcataagttgttttgcataagctaaaaa 34633382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 52700464 - 52700521
Alignment:
Q  201 acttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||||||| ||||| |||| |||||||| ||||||||||  |||||||||||||    
T  52700464 acttattttgagcttatgaaaaagaacttatgtaaataaataatcttttatgttaatt 52700521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 213048 - 213008
Alignment:
Q  208 ttgagtttatgcaaaacaacttatgcaaataaataaatttt 248  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  213048 ttgagcttatgcaaaacaacttatgcaaataaataagtttt 213008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 9201618 - 9201681
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||||||||  |||| ||||||||||||||||||| |||||||||    
T  9201618 gtttggattag-cttattttagagtttatataaaataacttatgcaaataaataagtttttatgt 9201681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 22117321 - 22117384
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  ||||||||||||||||||||||| ||||||||||    
T  22117321 gtttggattag-cttattttagagcttatataaaacaacttatgcaaataaatacatttttatgt 22117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 31022385 - 31022433
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgtt 254  Q
    ||||||| |||||||||||| || |||||||||||||| ||||||||||    
T  31022385 ttttgagcttatgcaaaacatctcatgcaaataaataagtttttatgtt 31022433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 31736486 - 31736442
Alignment:
Q  209 tgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||    
T  31736486 tgagcttatgcaaaacaacttatgtaaataaataaaattttatgt 31736442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 52700516 - 52700464
Alignment:
Q  300 acataaaagtttatttatttacacaagttgttttacataagcttaaaataagt 352  Q
    ||||||||| ||||||||||||| ||||| |||| |||||||| |||||||||    
T  52700516 acataaaagattatttatttacataagttctttttcataagctcaaaataagt 52700464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 10045896 - 10045955
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaattttt 249  Q
    |||||||  |||| ||||||||| |||| |||||||||||| || |||||||||||||||    
T  10045896 gtttggagaagacatattttgagcttatacaaaacaacttacgcgaataaataaattttt 10045955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 11298748 - 11298697
Alignment:
Q  200 gacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    ||||||||||||| ||||| |||| | |||||||||||||||||| ||||||    
T  11298748 gacttattttgagcttatgaaaaatagcttatgcaaataaataaacttttat 11298697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 22117390 - 22117320
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataagtctaattcaaacg 364  Q
    |||||||||||||| | ||||||||| || ||||||||||| ||||||| ||||||||| ||||| ||||||    
T  22117390 aataatacataaaaatgtatttatttgcataagttgttttatataagctctaaaataag-ctaatccaaacg 22117320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 29877622 - 29877669
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||| ||||||||||||| ||||||||||||||||  ||||||||    
T  29877622 ttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgt 29877669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 39117036 - 39116985
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaat 241  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| || |||||    
T  39117036 gtttggtttatacttattttgagcttatgcaaaacaacttatgtaactaaat 39116985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 1374466 - 1374420
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatg 252  Q
    ||||||| |||||||||| |||||||||||||||| || ||||||||    
T  1374466 ttttgagcttatgcaaaaaaacttatgcaaataaaaaagtttttatg 1374420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 948112 - 948055
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| |||||||||| || ||| | |||| |||||||| ||||    
T  948112 tatgaataatacataaaagcttatttattttcataagctattttgcataagctaaaaa 948055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 3564203 - 3564248
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttat 251  Q
    ||||||| |||||||||||| |||||| ||||||||||| ||||||    
T  3564203 ttttgagcttatgcaaaacagcttatgaaaataaataaacttttat 3564248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 3564382 - 3564314
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||| |||||||||| ||| ||||| |||| | |||||||||||||||||  |||||||||||||    
T  3564382 gtttggatt-gacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgttaatt 3564314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 4603381 - 4603430
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgttttacataagctt 343  Q
    ||||||||||||||  |||||||||| || ||||||||||| ||||||||    
T  4603381 aataatacataaaaacttatttatttgcataagttgttttatataagctt 4603430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 4603420 - 4603387
Alignment:
Q  220 aaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||||||||||||| |||||||||    
T  4603420 aaaacaacttatgcaaataaataagtttttatgt 4603387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 5905233 - 5905200
Alignment:
Q  225 aacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||||||||||||||||||| ||||||    
T  5905233 aacttatgcaaataaataaatttttatattaatt 5905200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 11298697 - 11298758
Alignment:
Q  302 ataaaagtttatttatttacacaagttgttttacataagcttaaaataagtctaattcaaac 363  Q
    |||||||||||||||||| || ||| | |||| |||||||| |||||||||| | |||||||    
T  11298697 ataaaagtttatttatttgcataagctatttttcataagctcaaaataagtccatttcaaac 11298758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 12495692 - 12495753
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataa 350  Q
    ||||||||||||||||||| |||||||||| || ||| |||||| | |||||| ||||||||    
T  12495692 tatgaataatacataaaagcttatttatttgcataagctgttttgcttaagctataaaataa 12495753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 18424323 - 18424380
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| ||||||||||  | || ||||||| |||||||| ||||    
T  18424323 tatgaataatacataaaagcttatttatttgtataaattgttttgcataagctcaaaa 18424380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 22823763 - 22823823
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaattttta 250  Q
    ||||||||||| |||||||| ||| ||||  |||||||||||||||||||||||| ||||||    
T  22823763 gtttggattag-cttattttagagcttatataaaacaacttatgcaaataaataagttttta 22823823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 23297478 - 23297421
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagcttaaaa 347  Q
    ||||||||||||||||||| |||||||||| || ||| | |||| |||||||| ||||    
T  23297478 tatgaataatacataaaagcttatttatttgcataagctattttgcataagctcaaaa 23297421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 29996742 - 29996705
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  29996742 ttttgagtttttgcaaaacaatttatgcaaataaataa 29996705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 39932793 - 39932838
Alignment:
Q  283 acaatcgtatgaataatacataaaagtttatttatttacacaagtt 328  Q
    |||||| ||| |||||||||||||||||||||||||| || |||||    
T  39932793 acaatcttataaataatacataaaagtttatttatttgcataagtt 39932838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 243
Target Start/End: Complemental strand, 42611963 - 42611934
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataa 243  Q
    ||||||||||||||||||||||||||||||    
T  42611963 ttatgcaaaacaacttatgcaaataaataa 42611934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 46650331 - 46650282
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttattt 319  Q
    |||||||||||||||||   |||||||||||||| |||| ||||||||||    
T  46650331 ataaactacaattacaaatttatgaataatacatgaaagcttatttattt 46650282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 2547957 - 2548025
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||  | ||||||||| |||||  ||| | ||||||||||||||||| ||||||| ||||||    
T  2547957 gtttggattaagcatattttgagcttatgagaaagagcttatgcaaataaataagtttttatattaatt 2548025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 9153504 - 9153560
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| | ||  |||| | |||||||||||||||||| |||||||||||||    
T  9153504 cttattttgagctaattaaaaatagcttatgcaaataaataaacttttatgttaatt 9153560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 10796364 - 10796416
Alignment:
Q  202 cttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    |||||||| ||| |||||||||||||||| || |||||||||| |||||||||    
T  10796364 cttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgt 10796416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 12495570 - 12495622
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||  | ||||||||||||||||| ||||||||||||||    
T  12495570 ttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatt 12495622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 15179785 - 15179848
Alignment:
Q  190 gtttggattagacttattttg-agtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| ||||| ||| |||||||  |||||| |||||||||||||||| ||||||||||    
T  15179785 gtttggattag-cttatattggagtttatataaaacagcttatgcaaataaatatatttttatgt 15179848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 17222989 - 17222937
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||| | ||||| ||||||||||| ||||||||||||||    
T  17222989 ttttgagcttatgaaaaatagcttattcaaataaataagtttttatgttaatt 17222937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 18630817 - 18630873
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||| |||| | |||||||||||||||||  |||||| ||||||    
T  18630817 cttattttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaatt 18630873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 19298184 - 19298224
Alignment:
Q  294 aataatacataaaagtttatttatttacacaagttgtttta 334  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  19298184 aataatacataaaaatttatttatttgcataagttgtttta 19298224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 25638424 - 25638368
Alignment:
Q  202 cttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    |||||||| | |||||| |||| |  |||||||||||||||||||||||| ||||||    
T  25638424 cttattttaaatttatgaaaaatagtttatgcaaataaataaatttttatattaatt 25638368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 29615434 - 29615382
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttatttaca 322  Q
    ||||||||| | ||||| | ||||||||||||||| ||| |||||||||||||    
T  29615434 ataaactaccactacaagcttatgaataatacatataagcttatttatttaca 29615382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 31022559 - 31022523
Alignment:
Q  207 tttgagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  31022559 tttgagattatgaaaaacaacttatgcaaataaataa 31022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 33533910 - 33533942
Alignment:
Q  205 attttgagtttatgcaaaacaacttatgcaaat 237  Q
    ||||||||||||| |||||||||||||||||||    
T  33533910 attttgagtttatacaaaacaacttatgcaaat 33533942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 38345940 - 38345877
Alignment:
Q  190 gtttggattagacttat-tttgagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| ||||||| |||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  38345940 gtttggatt-gacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgt 38345877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 38876056 - 38876100
Alignment:
Q  214 ttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| |||| | |||||||||||||||||| |||||||||||||    
T  38876056 ttatgaaaaatagcttatgcaaataaataaacttttatgttaatt 38876100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 43415412 - 43415345
Alignment:
Q  186 gtctgtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||| ||| |||||||||| ||| ||| | |||||||||| ||||||||||||| |||||||||    
T  43415412 gtctgtttgaatt-gacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgt 43415345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 46650450 - 46650383
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||  ||||||||||   || |||||||| |||||| |||||||||| ||||||||||||||    
T  46650450 gtttggattaagcttattttgaacgtaggcaaaacagcttatg-aaataaataagtttttatgttaatt 46650383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 54412131 - 54412103
Alignment:
Q  225 aacttatgcaaataaataaatttttatgt 253  Q
    |||||||||||||||||||||||||||||    
T  54412131 aacttatgcaaataaataaatttttatgt 54412103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 55638186 - 55638154
Alignment:
Q  190 gtttggattagacttattttgagtttatgcaaa 222  Q
    |||||||||||||||||||| ||||||||||||    
T  55638186 gtttggattagacttattttaagtttatgcaaa 55638154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 14647 - 14724
Alignment:
Q  180 ttaagagtctgtttggattagacttattttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||| ||| ||||||||||| |||||| |||| ||||||||||| ||||||||||||||||||  ||| |||||||||    
T  14647 ttaagggtccgtttggattaggcttattatgagcttatgcaaaac-acttatgcaaataaataagctttcatgttaatt 14724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 14772 - 14821
Alignment:
Q  270 ataaactacaattacaatcgtatgaataatacataaaagtttatttattt 319  Q
    |||||||||| ||| || | ||||||||||||||||||| ||||||||||    
T  14772 ataaactacatttaaaaacttatgaataatacataaaagcttatttattt 14821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 31306 - 31236
Alignment:
Q  190 gtttggattagacttatttt--gagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||||||| ||||||||  ||| ||||| ||||||||||||||||||||||||  |||| ||||||||    
T  31306 gtttggattaggcttattttttgagcttatgtaaaacaacttatgcaaataaataagcttttttgttaatt 31236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 31245 - 31309
Alignment:
Q  304 aaaagtttatttatttacacaagttgttttacataagct--taaaataagtctaattcaaacgga 366  Q
    ||||| |||||||||| || |||||||||||||||||||   |||||||| ||||| ||||||||    
T  31245 aaaagcttatttatttgcataagttgttttacataagctcaaaaaataagcctaatccaaacgga 31309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 40784 - 40737
Alignment:
Q  202 cttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttt 248  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||    
T  40784 cttattttagagtttatataaaacaacttatgcaaataaataaatttt 40737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 279110 - 279047
Alignment:
Q  190 gtttggattagacttatttt-gagtttatgcaaaacaacttatgcaaataaataaatttttatgt 253  Q
    ||||||||||| |||||||| ||| ||||  |||| |||||||||||||| ||||||||||||||    
T  279110 gtttggattag-cttattttagagattatataaaataacttatgcaaatacataaatttttatgt 279047  T

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Target: scaffold1367 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 351
Target Start/End: Original strand, 1173 - 1222
Alignment:
Q  302 ataaaagtttatttatttacacaagttgttttacataagcttaaaataag 351  Q
    ||||||| |||||||||| || ||||| |||| |||||||||||||||||    
T  1173 ataaaagcttatttatttgcataagttatttttcataagcttaaaataag 1222  T

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Target: scaffold1130 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 2236 - 2273
Alignment:
Q  210 gagtttatgcaaaacaacttatgcaaataaataaattt 247  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  2236 gagtttatataaaacaacttatgcaaataaataaattt 2273  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 24785 - 24724
Alignment:
Q  290 tatgaataatacataaaagtttatttatttacacaagttgttttacataagct-taaaataa 350  Q
    ||||||||||||||||||| |||||||||| || ||| |||||| | |||||| ||||||||    
T  24785 tatgaataatacataaaagcttatttatttgcataagctgttttgcttaagctataaaataa 24724  T

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Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 24907 - 24855
Alignment:
Q  206 ttttgagtttatgcaaaacaacttatgcaaataaataaatttttatgttaatt 258  Q
    ||||||| ||||| |||  | ||||||||||||||||| ||||||||||||||    
T  24907 ttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatt 24855  T

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Target: scaffold1088 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 1270 - 1314
Alignment:
Q  200 gacttatttt-gagtttatgcaaaacaacttatgcaaataaataa 243  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||    
T  1270 gacttattttagagcttatgcaaaacaacttatgcaaatgaataa 1314  T

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