View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5823-Insertion-6 (Length: 680)
Name: NF5823-Insertion-6
Description: NF5823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5823-Insertion-6 |
 |  |
|
| [»] scaffold0531 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 320; Significance: 1e-180; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 9 - 348
Target Start/End: Complemental strand, 7971911 - 7971572
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7971911 |
gcaaatggttgagatgcatgagatggttccaggaaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
7971812 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggtacaggtcggctcggacattgtctacatggtcaccggaggtgcatcattacaaaaatttcacaatacagtctgtccaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
7971811 |
gtgatgcctcaacaacttgtggtacaggtcgggtcggacattgtctacatggtcaccggaggtgcatcattgcaaaaatttcacaatacagtctgtccaa |
7971712 |
T |
 |
| Q |
209 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcactttgtattgtctcatctaccgaacttgaactccatttccggtgtatc |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7971711 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcattttgtattgtctcatctaccaaacttgaactccatttccggtgtatc |
7971612 |
T |
 |
| Q |
309 |
tttggtggcagccgtcatgtccatgaggtatatcgacatc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7971611 |
tttggtggcagccgtcatgtccatgaggtatatcgacatc |
7971572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 9 - 348
Target Start/End: Original strand, 8041777 - 8042116
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8041777 |
gcaaatggttgagatgcatgagatggttccaggaaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
8041876 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggtacaggtcggctcggacattgtctacatggtcaccggaggtgcatcattacaaaaatttcacaatacagtctgtccaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8041877 |
gtgatgcctcaacaacttgtggtacaggtcgggtcggacattgtctacatggtcaccggaggtgcatcattgcaaaaatttcacaatacagtctgtccaa |
8041976 |
T |
 |
| Q |
209 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcactttgtattgtctcatctaccgaacttgaactccatttccggtgtatc |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8041977 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcattttgtattgtctcatctaccaaacttgaactccatttccggtgtatc |
8042076 |
T |
 |
| Q |
309 |
tttggtggcagccgtcatgtccatgaggtatatcgacatc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8042077 |
tttggtggcagccgtcatgtccatgaggtatatcgacatc |
8042116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 409 - 680
Target Start/End: Complemental strand, 7971511 - 7971240
Alignment:
| Q |
409 |
catcactctttataagtaacttgtggattgaaacaagctaatttaaatcttttatgtttgtgtttcagttactctacaattgcttgggctggtagtatac |
508 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7971511 |
catcactctttataagtaacttgtggaatgaaacaagctaatttaaatcttttatgtttgtgtttcagttactctacaattgcttgggctggtagtatac |
7971412 |
T |
 |
| Q |
509 |
acaagggagtactagaaaatgtacaatatagtagcaaggctacaactactgcaggatctgtctttaatttctttaatgcacttggctctgttgcatttgc |
608 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7971411 |
acaagggagtactagaaaatgtacaatatagtagcaaagctacaactactgcaggatctgtctttaatttctttaatgcacttggctctgttgcatttgc |
7971312 |
T |
 |
| Q |
609 |
ctttgccggacacaacgtggtgcttgagatccaagcaacaattccgtctacaccggagaaaccatctaaggg |
680 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7971311 |
ctttgccggacacaacgtggtgctggagatccaagcaacaattccgtctacacctgagaaaccatctaaggg |
7971240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 437 - 680
Target Start/End: Original strand, 8042230 - 8042473
Alignment:
| Q |
437 |
tgaaacaagctaatttaaatcttttatgtttgtgtttcagttactctacaattgcttgggctggtagtatacacaagggagtactagaaaatgtacaata |
536 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8042230 |
tgaaacaagctaatttaaatcttttatgtttgtgtttcagttactctacaattgcttgggctggtagtatacacaagggagtactagaaaatgtacaata |
8042329 |
T |
 |
| Q |
537 |
tagtagcaaggctacaactactgcaggatctgtctttaatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgcttgag |
636 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |
|
|
| T |
8042330 |
tagtagcaaagctacaactactgcaggatctgtcttttatttctttaatgcacttggctctgttgcatttgcctttgctggacacattgtggtgctggag |
8042429 |
T |
 |
| Q |
637 |
atccaagcaacaattccgtctacaccggagaaaccatctaaggg |
680 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8042430 |
atccaagcaacaattccgtctacaccggagaaaccatctaaggg |
8042473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 9 - 348
Target Start/End: Original strand, 8031898 - 8032237
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
||||||||||||||||||||| ||| |||| || |||||| |||||| ||| |||||||||| |||||||| ||||| ||||||||||| | | ||| |
|
|
| T |
8031898 |
gcaaatggttgagatgcatgaaatgattccgggaaaacgttttgatagataccatgaattaggtcaacatgcgtttggcgaaaagttaggcctttatatt |
8031997 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggtacaggtcggctcggacattgtctacatggtcaccggaggtgcatcattacaaaaatttcacaatacagtctgtccaa |
208 |
Q |
| |
|
||| | |||||||||||| | ||| | || || ||||||||||||||||||||||||||||||||||| | || || ||||||||||| ||| ||| |
|
|
| T |
8031998 |
gtggttcctcaacaacttatagtagaagttgggggcgacattgtctacatggtcaccggaggtgcatcattgcggaagttccacaatacagtgtgttcaa |
8032097 |
T |
 |
| Q |
209 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcactttgtattgtctcatctaccgaacttgaactccatttccggtgtatc |
308 |
Q |
| |
|
|||||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8032098 |
gttgcaaaaatatcaaattgacctatttcattatgatctttgcctctgctcaatttgtattgtgtcatctaccaaacttgaactccatttccggtgtatc |
8032197 |
T |
 |
| Q |
309 |
tttggtggcagccgtcatgtccatgaggtatatcgacatc |
348 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
8032198 |
cttggttgcagcagtcatgtccatttggtatatcgacatc |
8032237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 474 - 680
Target Start/End: Original strand, 8032363 - 8032569
Alignment:
| Q |
474 |
cagttactctacaattgcttgggctggtagtatacacaagggagtactagaaaatgtacaatatagtagcaaggctacaactactgcaggatctgtcttt |
573 |
Q |
| |
|
|||||| ||||||||||||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||| |
|
|
| T |
8032363 |
cagttattctacaattgcttggactactagtgtacacaagggagtacaagaaaatgtacaatatagtagcaaggctacaaatactgcagaatcagtcttt |
8032462 |
T |
 |
| Q |
574 |
aatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgcttgagatccaagcaacaattccgtctacaccggagaaaccat |
673 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
8032463 |
aatttctttaatgcactcggctctgttgcatttgcctatgctggacataatgtggtgctcgagatccaagcaacaattccatctacacctgagaaaccat |
8032562 |
T |
 |
| Q |
674 |
ctaaggg |
680 |
Q |
| |
|
||||||| |
|
|
| T |
8032563 |
ctaaggg |
8032569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 679
Target Start/End: Complemental strand, 7978294 - 7978174
Alignment:
| Q |
559 |
gcaggatctgtctttaatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgcttgagatccaagcaacaattccgtcta |
658 |
Q |
| |
|
|||||| | |||||| | |||||||||||||||||| || |||| ||||||| ||| |||||||| |||||| | ||||||||||||||||||||||| | |
|
|
| T |
7978294 |
gcaggaacagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcga |
7978195 |
T |
 |
| Q |
659 |
caccggagaaaccatctaagg |
679 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
7978194 |
caccggagaaaccatccaagg |
7978174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 7979479 - 7979356
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
||||||||||||||||||||| |||||||| || ||||| |||||| ||| |||||||||| |||||||||||||| |||| ||||| | | ||| |
|
|
| T |
7979479 |
gcaaatggttgagatgcatgaaatggttccgggaaaacgctttgatagataccatgaattaggtcaacatgcttttgggaaaaaattaggtctttatatt |
7979380 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggta |
132 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
7979379 |
gtggtgcctcaacaacttgtggta |
7979356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 9 - 330
Target Start/End: Complemental strand, 41382310 - 41381989
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
41382310 |
gcaaatggttgagatgcatgagatggttccgggaaaacgtcttgatacatataatgaattgggccaacatgcgtttggtgaaaagttagggttgtggatt |
41382211 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggtacaggtcggctcggacattgtctacatggtcaccggaggtgcatcattacaaaaatttcacaatacagtctgtccaa |
208 |
Q |
| |
|
|||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
41382210 |
gtgatgcctcaacaacttgtggtacaagttggggtggacattgtctacatggtcaccggaggtgcatcattgcaaaaatttcacaatacagtttgtccaa |
41382111 |
T |
 |
| Q |
209 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcactttgtattgtctcatctaccgaacttgaactccatttccggtgtatc |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | |||||| |||| ||||||| |
|
|
| T |
41382110 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcaatttgtattgtgtcatctacccaacctcaactccctttctagtgtatc |
41382011 |
T |
 |
| Q |
309 |
tttggtggcagccgtcatgtcc |
330 |
Q |
| |
|
||| || ||||| || |||||| |
|
|
| T |
41382010 |
ttttgttgcagcagttatgtcc |
41381989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 469 - 680
Target Start/End: Complemental strand, 41381888 - 41381677
Alignment:
| Q |
469 |
tgtttcagttactctacaattgcttgggctggtagtatacacaagggagtactagaaaatgtacaatatagtagcaaggctacaactactgcaggatctg |
568 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||| ||||||||||||||| || |||||||||||||| |||||| || || |||| ||||||||||| |
|
|
| T |
41381888 |
tgtttcagttactctgcaattgcttgggttggtagtgtacacaagggagtacaagcaaatgtacaatatactagcaaagccacgactagtgcaggatctg |
41381789 |
T |
 |
| Q |
569 |
tctttaatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgcttgagatccaagcaacaattccgtctacaccggagaa |
668 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||| |||||| | || || ||| | ||||| || |||||||| ||||| |
|
|
| T |
41381788 |
tctttaatttctttaatgcacttggttctgttgcttttgcctatgcaggacacaatgtggtgttggaaattcaatctacaatcccatctacacctgagaa |
41381689 |
T |
 |
| Q |
669 |
accatctaaggg |
680 |
Q |
| |
|
|||||||||||| |
|
|
| T |
41381688 |
accatctaaggg |
41381677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 680
Target Start/End: Original strand, 43854448 - 43854531
Alignment:
| Q |
597 |
tgttgcatttgcctttgccggacacaacgtggtgcttgagatccaagcaacaattccgtctacaccggagaaaccatctaaggg |
680 |
Q |
| |
|
|||||||||||||| ||| |||||||| |||||| | ||||| ||||||||||| || || ||||| ||||||||||| ||||| |
|
|
| T |
43854448 |
tgttgcatttgcctatgctggacacaatgtggtgttggagattcaagcaacaatcccttccacaccagagaaaccatccaaggg |
43854531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0531 (Bit Score: 142; Significance: 4e-74; HSPs: 2)
Name: scaffold0531
Description:
Target: scaffold0531; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 9 - 342
Target Start/End: Complemental strand, 3434 - 3101
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
||||||||||||||||||||| |||||||| || |||||| |||||| || ||||| | || ||||| || ||||| ||||||||||| | | ||| |
|
|
| T |
3434 |
gcaaatggttgagatgcatgaaatggttcctggaaaacgttttgataggtaccatgaactgggacaacacgcgtttggcgaaaagttaggcctttatatt |
3335 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggtacaggtcggctcggacattgtctacatggtcaccggaggtgcatcattacaaaaatttcacaatacagtctgtccaa |
208 |
Q |
| |
|
||| |||||||||||||||| ||| | || || | ||||||| |||||||||||||||||||||||| | | ||| || ||||||||||| ||||||| |
|
|
| T |
3334 |
gtggtgcctcaacaacttgtagtagaagttggggtgaacattgtttacatggtcaccggaggtgcatcactgcgaaagttccacaatacagtgtgtccaa |
3235 |
T |
 |
| Q |
209 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcactttgtattgtctcatctaccgaacttgaactccatttccggtgtatc |
308 |
Q |
| |
|
|||||||| |||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
3234 |
gttgcaaaaatatcaaattgacatatttcattatgatctttgcctctgctcaatttgtattgtgtcatctaccaaacttgaactccatttctggtgtatc |
3135 |
T |
 |
| Q |
309 |
tttggtggcagccgtcatgtccatgaggtatatc |
342 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||| |
|
|
| T |
3134 |
tttggtggcagcagtcatgtccatttggtatatc |
3101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0531; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 474 - 680
Target Start/End: Complemental strand, 2744 - 2538
Alignment:
| Q |
474 |
cagttactctacaattgcttgggctggtagtatacacaagggagtactagaaaatgtacaatatagtagcaaggctacaactactgcaggatctgtcttt |
573 |
Q |
| |
|
|||||||||||| ||||||||| ||| || ||||||||||||| |||||||||||||||||||||| || ||||| || | |||| ||| |||||| |
|
|
| T |
2744 |
cagttactctactattgcttggactgccggtgcacacaagggagtaatagaaaatgtacaatatagtagaaacgctacgacggccgcagaatcagtcttt |
2645 |
T |
 |
| Q |
574 |
aatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgcttgagatccaagcaacaattccgtctacaccggagaaaccat |
673 |
Q |
| |
|
|||||||||||||||||||||||| | || ||||||| |||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2644 |
aatttctttaatgcacttggctctatcgcgtttgcctatgccggacacaatgtggtactggagatccaagcaacaattccgtctacacctgagaaaccat |
2545 |
T |
 |
| Q |
674 |
ctaaggg |
680 |
Q |
| |
|
||||||| |
|
|
| T |
2544 |
ctaaggg |
2538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 9 - 311
Target Start/End: Complemental strand, 14198876 - 14198574
Alignment:
| Q |
9 |
gcaaatggttgagatgcatgagatggttccagggaaacgtcttgatacatataatgaattagggcaacatgcttttggtgaaaagttagggttgtggatt |
108 |
Q |
| |
|
||||||||||||||||||||| ||||| || ||||||||| | |||| |||| ||||| | || ||| ||||||||||||||||||| || ||| ||| |
|
|
| T |
14198876 |
gcaaatggttgagatgcatgaaatggtacccgggaaacgtttcgatagatatcatgaactgggtcaatatgcttttggtgaaaagttgggtctgtatatt |
14198777 |
T |
 |
| Q |
109 |
gtgatgcctcaacaacttgtggtacaggtcggctcggacattgtctacatggtcaccggaggtgcatcattacaaaaatttcacaatacagtctgtccaa |
208 |
Q |
| |
|
|| |||| ||||||||| | || | |||||| |||||||||||||||| |||||||| ||| || || || ||||| |||| || ||| | |
|
|
| T |
14198776 |
gttgtgccacaacaacttattgttgaagtcggcgttaacattgtctacatggtaaccggaggaaaatctttgcagaagtttcatgataccgtgtgttccg |
14198677 |
T |
 |
| Q |
209 |
gttgcaaaccaatcaaattgagctttttcattatgatctttgcctctgctcactttgtattgtctcatctaccgaacttgaactccatttccggtgtatc |
308 |
Q |
| |
|
||||||| ||||||||||| | ||| || ||||| |||||||||| ||||||||| |||||||| || || ||||||||||| ||||| ||||| || |
|
|
| T |
14198676 |
attgcaaaaaaatcaaattgacttattttataatgatttttgcctctgttcactttgtcttgtctcacctccctaacttgaactctatttctggtgtctc |
14198577 |
T |
 |
| Q |
309 |
ttt |
311 |
Q |
| |
|
||| |
|
|
| T |
14198576 |
ttt |
14198574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 547 - 680
Target Start/End: Complemental strand, 14198257 - 14198124
Alignment:
| Q |
547 |
gctacaactactgcaggatctgtctttaatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgcttgagatccaagcaa |
646 |
Q |
| |
|
||||| ||||| ||||| |||||||| |||||| ||||| ||||| ||| || ||||| | ||||||||||||||||||| | || |||||||||| |
|
|
| T |
14198257 |
gctacgactaccccaggaactgtctttggtttcttcaatgcccttggagatgtggcttttgcttatgccggacacaacgtggtgttagaaatccaagcaa |
14198158 |
T |
 |
| Q |
647 |
caattccgtctacaccggagaaaccatctaaggg |
680 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| |
|
|
| T |
14198157 |
caattccatctacaccggaaaaaccatctaaggg |
14198124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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