View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5824-Insertion-13 (Length: 694)

Name: NF5824-Insertion-13
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5824-Insertion-13
NF5824-Insertion-13
[»] chr5 (35 HSPs)
chr5 (320-664)||(1759786-1760136)
chr5 (10-242)||(1759476-1759708)
chr5 (351-464)||(35653252-35653364)
chr5 (348-453)||(43414072-43414176)
chr5 (351-464)||(25017288-25017400)
chr5 (351-459)||(5151489-5151596)
chr5 (353-460)||(16315535-16315639)
chr5 (351-464)||(39567903-39568015)
chr5 (348-460)||(4421965-4422076)
chr5 (351-463)||(8410142-8410253)
chr5 (351-457)||(12068178-12068283)
chr5 (355-456)||(34546782-34546882)
chr5 (371-458)||(27823279-27823365)
chr5 (352-457)||(3639079-3639182)
chr5 (351-464)||(28143120-28143232)
chr5 (355-464)||(35945250-35945358)
chr5 (360-464)||(1479133-1479236)
chr5 (351-439)||(13951258-13951345)
chr5 (396-464)||(15915876-15915944)
chr5 (352-457)||(10017626-10017727)
chr5 (351-464)||(338761-338873)
chr5 (351-464)||(4962514-4962625)
chr5 (348-449)||(25568304-25568404)
chr5 (356-464)||(37243852-37243958)
chr5 (546-659)||(1738973-1739080)
chr5 (596-662)||(1744360-1744426)
chr5 (352-438)||(12914176-12914261)
chr5 (616-664)||(1724448-1724496)
chr5 (355-440)||(6823773-6823858)
chr5 (352-459)||(27535098-27535202)
chr5 (348-432)||(39693007-39693090)
chr5 (348-438)||(10406785-10406873)
chr5 (348-390)||(4838278-4838320)
chr5 (352-400)||(16899632-16899680)
chr5 (352-390)||(39335474-39335512)
[»] chr4 (38 HSPs)
chr4 (351-464)||(35808393-35808505)
chr4 (351-464)||(55669739-55669851)
chr4 (352-464)||(2362630-2362743)
chr4 (355-464)||(26040357-26040465)
chr4 (348-457)||(32131139-32131247)
chr4 (352-457)||(34016626-34016730)
chr4 (351-464)||(41956210-41956322)
chr4 (348-464)||(10100110-10100225)
chr4 (351-463)||(23765578-23765689)
chr4 (351-457)||(51266924-51267029)
chr4 (351-464)||(27839303-27839415)
chr4 (351-464)||(34316719-34316832)
chr4 (351-464)||(45688743-45688855)
chr4 (351-463)||(31754938-31755049)
chr4 (348-456)||(33951697-33951804)
chr4 (352-456)||(30475426-30475529)
chr4 (351-464)||(26831783-26831894)
chr4 (351-451)||(20811263-20811362)
chr4 (352-464)||(31168135-31168246)
chr4 (351-439)||(19328950-19329037)
chr4 (396-458)||(19876186-19876248)
chr4 (351-457)||(50514618-50514722)
chr4 (351-431)||(47188695-47188774)
chr4 (359-463)||(54339121-54339223)
chr4 (352-445)||(52341602-52341694)
chr4 (352-464)||(35675187-35675298)
chr4 (396-464)||(51290474-51290542)
chr4 (352-460)||(29462802-29462909)
chr4 (351-463)||(40436081-40436192)
chr4 (397-463)||(46695960-46696026)
chr4 (396-463)||(9693380-9693446)
chr4 (353-458)||(13498120-13498224)
chr4 (396-464)||(31487765-31487833)
chr4 (351-390)||(9693541-9693580)
chr4 (431-460)||(19328748-19328777)
chr4 (10-63)||(27469701-27469754)
chr4 (396-457)||(35511184-35511245)
chr4 (10-50)||(27474120-27474160)
[»] chr1 (42 HSPs)
chr1 (351-464)||(34874567-34874679)
chr1 (351-464)||(932151-932263)
chr1 (351-464)||(22346231-22346343)
chr1 (351-464)||(41147472-41147584)
chr1 (351-456)||(42607326-42607430)
chr1 (352-464)||(27209715-27209826)
chr1 (359-458)||(11385810-11385908)
chr1 (351-464)||(49508728-49508839)
chr1 (348-456)||(6170553-6170660)
chr1 (352-464)||(43433776-43433887)
chr1 (351-463)||(49901926-49902037)
chr1 (355-463)||(50295428-50295535)
chr1 (351-457)||(47655372-47655477)
chr1 (351-464)||(11385981-11386093)
chr1 (351-464)||(29966822-29966935)
chr1 (351-456)||(33929966-33930070)
chr1 (348-464)||(2125701-2125816)
chr1 (351-463)||(24140773-24140883)
chr1 (351-458)||(4940740-4940846)
chr1 (358-464)||(32213883-32213988)
chr1 (353-457)||(40845253-40845356)
chr1 (348-444)||(50154470-50154565)
chr1 (351-459)||(52396443-52396549)
chr1 (351-464)||(7190469-7190581)
chr1 (355-464)||(28850904-28851011)
chr1 (352-456)||(26469584-26469687)
chr1 (348-456)||(28277484-28277591)
chr1 (348-464)||(44286869-44286984)
chr1 (372-464)||(45721773-45721864)
chr1 (348-431)||(47895331-47895413)
chr1 (355-457)||(4656020-4656121)
chr1 (378-464)||(5945447-5945532)
chr1 (418-464)||(8244154-8244200)
chr1 (366-464)||(14331852-14331949)
chr1 (366-464)||(16691309-16691406)
chr1 (366-460)||(17402963-17403056)
chr1 (348-456)||(31975484-31975591)
chr1 (366-444)||(48938651-48938727)
chr1 (424-458)||(30222991-30223025)
chr1 (366-460)||(43168156-43168249)
chr1 (355-428)||(30222624-30222697)
chr1 (354-459)||(41492912-41493015)
[»] chr2 (29 HSPs)
chr2 (351-462)||(6999202-6999312)
chr2 (352-464)||(765147-765258)
chr2 (355-457)||(2966544-2966645)
chr2 (351-460)||(862589-862697)
chr2 (351-464)||(39401532-39401643)
chr2 (348-464)||(16361563-16361678)
chr2 (352-464)||(27495124-27495235)
chr2 (351-464)||(17603811-17603923)
chr2 (351-464)||(33726380-33726492)
chr2 (351-464)||(39085789-39085901)
chr2 (351-456)||(41436478-41436582)
chr2 (348-457)||(17118377-17118484)
chr2 (351-464)||(1321168-1321280)
chr2 (348-457)||(33864352-33864460)
chr2 (351-460)||(35445291-35445400)
chr2 (359-463)||(44299679-44299782)
chr2 (348-457)||(9201499-9201606)
chr2 (355-460)||(17095068-17095171)
chr2 (352-444)||(44173120-44173211)
chr2 (342-452)||(13997913-13998022)
chr2 (355-460)||(17056059-17056162)
chr2 (355-460)||(17068506-17068609)
chr2 (348-452)||(464792-464896)
chr2 (355-460)||(17074489-17074592)
chr2 (348-425)||(23685688-23685764)
chr2 (348-390)||(11445389-11445431)
chr2 (351-455)||(34334167-34334270)
chr2 (351-412)||(15004927-15004987)
chr2 (396-456)||(43140328-43140388)
[»] chr7 (33 HSPs)
chr7 (351-464)||(43567503-43567615)
chr7 (351-464)||(29034687-29034799)
chr7 (351-464)||(5240329-5240441)
chr7 (355-464)||(40763253-40763361)
chr7 (348-457)||(42222218-42222326)
chr7 (352-464)||(8380442-8380553)
chr7 (348-457)||(43958087-43958195)
chr7 (351-463)||(8292745-8292856)
chr7 (352-460)||(27053494-27053601)
chr7 (351-456)||(7322958-7323062)
chr7 (351-460)||(22521586-22521694)
chr7 (351-456)||(24359713-24359817)
chr7 (351-463)||(22707049-22707159)
chr7 (348-463)||(49069552-49069666)
chr7 (348-464)||(30538477-30538589)
chr7 (352-462)||(41188785-41188894)
chr7 (355-463)||(40066915-40067021)
chr7 (356-455)||(3681699-3681797)
chr7 (351-460)||(1910244-1910351)
chr7 (375-464)||(48454819-48454907)
chr7 (351-446)||(40194826-40194920)
chr7 (371-464)||(36279139-36279231)
chr7 (348-457)||(46478560-46478667)
chr7 (352-464)||(8258640-8258746)
chr7 (351-460)||(5347973-5348078)
chr7 (352-443)||(46042749-46042838)
chr7 (354-451)||(31626051-31626147)
chr7 (355-441)||(42291284-42291371)
chr7 (351-423)||(29687476-29687547)
chr7 (352-457)||(1907593-1907697)
chr7 (360-428)||(30388693-30388760)
chr7 (352-381)||(29959068-29959097)
chr7 (396-444)||(31360309-31360357)
[»] chr6 (18 HSPs)
chr6 (351-463)||(6866915-6867026)
chr6 (351-463)||(12191493-12191604)
chr6 (362-464)||(10855443-10855544)
chr6 (351-464)||(5578274-5578386)
chr6 (351-441)||(7875201-7875290)
chr6 (374-464)||(29692338-29692427)
chr6 (351-464)||(26572079-26572186)
chr6 (348-464)||(8324101-8324216)
chr6 (348-463)||(7274212-7274326)
chr6 (351-459)||(16437592-16437691)
chr6 (354-460)||(28014638-28014743)
chr6 (351-395)||(32786069-32786113)
chr6 (351-441)||(7880447-7880536)
chr6 (396-464)||(32786260-32786327)
chr6 (366-444)||(27127524-27127601)
chr6 (352-445)||(12175561-12175652)
chr6 (352-463)||(31220325-31220435)
chr6 (402-442)||(12769254-12769294)
[»] chr3 (33 HSPs)
chr3 (351-459)||(36730155-36730262)
chr3 (348-463)||(4759848-4759962)
chr3 (351-460)||(8715503-8715610)
chr3 (351-460)||(9067390-9067497)
chr3 (352-464)||(29915572-29915683)
chr3 (352-464)||(29964725-29964836)
chr3 (348-457)||(46317483-46317591)
chr3 (348-464)||(32415566-32415681)
chr3 (348-463)||(44695669-44695783)
chr3 (351-452)||(12905292-12905391)
chr3 (348-463)||(37509108-37509222)
chr3 (351-464)||(44570383-44570495)
chr3 (351-464)||(10854859-10854975)
chr3 (352-442)||(52570783-52570872)
chr3 (351-456)||(35306332-35306436)
chr3 (351-460)||(51817313-51817421)
chr3 (351-464)||(8847449-8847561)
chr3 (351-456)||(12051038-12051142)
chr3 (396-464)||(1803932-1804000)
chr3 (355-464)||(25102319-25102426)
chr3 (352-464)||(45899540-45899652)
chr3 (424-464)||(41346346-41346386)
chr3 (351-412)||(31647304-31647364)
chr3 (348-436)||(20227405-20227492)
chr3 (408-464)||(48136720-48136776)
chr3 (596-659)||(2022788-2022851)
chr3 (596-662)||(3156968-3157034)
chr3 (359-460)||(18788-18888)
chr3 (610-662)||(3167250-3167302)
chr3 (353-441)||(34060786-34060873)
chr3 (353-427)||(41345977-41346050)
chr3 (358-446)||(11675320-11675405)
chr3 (405-450)||(39436518-39436563)
[»] chr8 (25 HSPs)
chr8 (351-464)||(19389307-19389419)
chr8 (351-463)||(21016234-21016345)
chr8 (351-457)||(25249345-25249450)
chr8 (352-452)||(18068963-18069062)
chr8 (352-460)||(45338005-45338112)
chr8 (348-462)||(6939155-6939268)
chr8 (355-457)||(8018765-8018866)
chr8 (351-458)||(4989936-4990039)
chr8 (351-455)||(21016063-21016166)
chr8 (351-451)||(26195383-26195482)
chr8 (360-456)||(26672799-26672894)
chr8 (355-456)||(10694811-10694911)
chr8 (351-460)||(3174456-3174568)
chr8 (351-456)||(34713924-34714030)
chr8 (352-456)||(37433267-37433369)
chr8 (351-451)||(14855394-14855493)
chr8 (396-460)||(7532829-7532893)
chr8 (371-458)||(5129459-5129545)
chr8 (396-458)||(44874369-44874431)
chr8 (348-412)||(33741523-33741586)
chr8 (396-464)||(35930180-35930248)
chr8 (369-444)||(31596438-31596512)
chr8 (364-450)||(26892799-26892884)
chr8 (355-443)||(6433548-6433635)
chr8 (360-388)||(41689098-41689126)
[»] scaffold0062 (3 HSPs)
scaffold0062 (351-460)||(16773-16880)
scaffold0062 (351-460)||(26941-27048)
scaffold0062 (351-460)||(37107-37214)
[»] scaffold0002 (1 HSPs)
scaffold0002 (351-431)||(392162-392241)
[»] scaffold0809 (1 HSPs)
scaffold0809 (396-463)||(4268-4335)


Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 320 - 664
Target Start/End: Original strand, 1759786 - 1760136
Alignment:
Q  320 agtcacactattttgttaagggtcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatctt 419  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||| | |||| ||||||| ||||| |||| ||    
T  1759786 agtcacactattttgttaagtgtcttgctaacacatttgcattggttttaacaacattttgacttttaaaaagttaaa-tttatcacttttctccatttt 1759884  T
Q  420 ccaatactatatttctatttttatccccttatccaatgccccaagcattcaccttttgttaaatataaagaagaaaacagaagcaacagagagcggaaga 519  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1759885 tcaatactatatttctatttttatcctcttatccaatgccccaagcattctccttttgttaaatataaagaagaaaacaaaagcaacagagagcggaaga 1759984  T
Q  520 ggaagagagtaagaaagttggttcat-------ttttccaaataacaacaaagaagggaaagatgaaaattagaacaagaacaaagagaaaaatttggat 612  Q
    ||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1759985 ggaagagagtaagaaagttggttcatcatctggttttccaaataacaacaaagaagagaaagatgaaaattagaacaagaacaaagagaaaaatttggat 1760084  T
Q  613 tcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcacagg 664  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1760085 tcaaggtctttttcatgtttattttgcaagagaaaatttactacttcacagg 1760136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 1759476 - 1759708
Alignment:
Q  10 tttagtttcttaccttcaaaagatttttacttttcttgttacttgaatgtaaaacttcatatttctataattcttctctgattatctagcattgcagaat 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1759476 tttagtttcttaccttcaaaagatttttacttttcttgttacttggatgtaaaacttcatatttctataattcttctctgattatctagcattgcagaat 1759575  T
Q  110 gaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagacttaatcccatacttcaaacttcnnnnnnnattacaccaaccg 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||| |    
T  1759576 gaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagacttaagcccatacttcaaacttctttttttattacaccaactg 1759675  T
Q  210 ataatataagttgaattttaaaacacacaattg 242  Q
    |||||||||||| ||||||||||||||||||||    
T  1759676 ataatataagttaaattttaaaacacacaattg 1759708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 35653364 - 35653252
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||||| ||| |||| | |||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  35653364 catgtttgcattggtttcaacaacattttgattttcaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcccctta 35653266  T
Q  451 tccaatgccccaag 464  Q
    |||||||| |||||    
T  35653265 tccaatgcaccaag 35653252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 348 - 453
Target Start/End: Complemental strand, 43414176 - 43414072
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||| || ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  43414176 taacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-ttgatcatttttcaccattttccaatgctatatttctatttttatcccc 43414078  T
Q  448 ttatcc 453  Q
    ||||||    
T  43414077 ttatcc 43414072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 25017400 - 25017288
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||||||||| | |||||||||||||||| | |||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  25017400 catgtttgtattggtttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 25017302  T
Q  451 tccaatgccccaag 464  Q
    ||||||||| ||||    
T  25017301 tccaatgcctcaag 25017288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 459
Target Start/End: Original strand, 5151489 - 5151596
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  5151489 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcccctta 5151587  T
Q  451 tccaatgcc 459  Q
    || ||||||    
T  5151588 tcaaatgcc 5151596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 16315639 - 16315535
Alignment:
Q  353 tgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatc 452  Q
    ||||||||||||||||||||||||||||||| |||||| | ||   ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  16315639 tgtttgcattggtttcaacaacattttgactattaaaaagtta---tttatcacttttcaccattttccaatgctatatttctatttttatccccttatc 16315543  T
Q  453 caatgccc 460  Q
    | ||||||    
T  16315542 cgatgccc 16315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 39567903 - 39568015
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||  |||||| |||||||| | |||| |||||||||||||| ||| ||||||| |||||||| |||||||||||| |||    
T  39567903 catgtttgcattggtttcaacaatgttttgatttttaaaaagttaaa-tttatcatttttcatcattttccaatgctatatttatatttttatcccatta 39568001  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  39568002 tccaatgccccaag 39568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 348 - 460
Target Start/End: Complemental strand, 4422076 - 4421965
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||  |||||||||||||||| || ||||| | |||| ||||||| |||||||||| ||||||| |||||||||||||||||||| |    
T  4422076 taacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcctc 4421978  T
Q  448 ttatccaatgccc 460  Q
    |||||||||||||    
T  4421977 ttatccaatgccc 4421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 8410142 - 8410253
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||||| || ||||||||||||||||||| | |||| |||||||||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  8410142 catgtttgtattggttttaataacattttgacttttaaaaagttaaa-tttatcattttttaccattttctaatactatatttttatttttatcccctta 8410240  T
Q  451 tccaatgccccaa 463  Q
    || ||| ||||||    
T  8410241 tctaataccccaa 8410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 457
Target Start/End: Complemental strand, 12068283 - 12068178
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||| |||| ||||||||||||||||||| | |||| ||||||| |||||||||| ||||||||||||||||||||||||||  ||| |    
T  12068283 catgtttgtattggtgtcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatatcctca 12068185  T
Q  451 tccaatg 457  Q
    |||||||    
T  12068184 tccaatg 12068178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 34546782 - 34546882
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||| |||||||||||||||| ||||||||||  || |||||||||| |||||||||| || ||||  ||||||||||||||||||||||||||||    
T  34546782 tttgcattagtttcaacaacattttaacttttaaaaa-attaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 34546880  T
Q  455 at 456  Q
    ||    
T  34546881 at 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 27823279 - 27823365
Alignment:
Q  371 caacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    ||||||||| | |||||||| | |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 3639182 - 3639079
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||| |||| |||||||||||  || |||||||||| | |||||||| |||||||  |||||||||||||||||||||||||    
T  3639182 atgtttgcattggtttcaacaatattt-gacttttaaaaa-attaaatttatcactcttcaccattttccaatgttatatttctatttttatccccttat 3639085  T
Q  452 ccaatg 457  Q
     |||||    
T  3639084 tcaatg 3639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 28143232 - 28143120
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| ||| |||||||||||||||||| |||||||| | |||| ||||| |||||||||||| | |||||  |||||||||||||||||| |||||    
T  28143232 catgtttgtattagtttcaacaacattttgatttttaaaaagttaaa-tttattatttttcaccatttcccaatgttatatttctatttttatctcctta 28143134  T
Q  451 tccaatgccccaag 464  Q
    | ||||| ||||||    
T  28143133 ttcaatgtcccaag 28143120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 464
Target Start/End: Original strand, 35945250 - 35945358
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||| |||||||||||||||| || ||||||| | |||| ||||||| ||||||| || |||||||  ||||||||||||||||| ||||||||||    
T  35945250 tttgcattagtttcaacaacattttaacatttaaaaagttaaa-tttatcacttttcactattttccaatgttatatttctatttttattcccttatcca 35945348  T
Q  455 atgccccaag 464  Q
    || |||||||    
T  35945349 ataccccaag 35945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 360 - 464
Target Start/End: Complemental strand, 1479236 - 1479133
Alignment:
Q  360 attggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgcc 459  Q
    ||||||||||| ||||||||||||||||||| | |||| ||||||| ||||||  || || |||| |||||||||||||||||||||||||| |||||||    
T  1479236 attggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatgcc 1479138  T
Q  460 ccaag 464  Q
     ||||    
T  1479137 tcaag 1479133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 13951345 - 13951258
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattt 439  Q
    |||| |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||| || |||| ||||||||||||||    
T  13951345 catgcttgcattggtttcaacaacattttgacttttaaaaaaat-aaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 15915876 - 15915944
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15915876 aaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaag 15915944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 10017727 - 10017626
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||| ||||||||||| |||||||||| | |   |||||||| |||||||||| ||||| |||||||||||||||||||||| |||||    
T  10017727 atgtttgcattggttttaacaacattttaacttttaaaaagtt---atttatcaattttcaccat-ttccagtactatatttctatttttatcctcttat 10017632  T
Q  452 ccaatg 457  Q
    | ||||    
T  10017631 caaatg 10017626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 338873 - 338761
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| |||||||||| ||||||| |||||||| | |||| ||||||| |||| | ||| || |||||  |||||| |||||||||||| |||    
T  338873 catgtttgcatttgtttcaacaatattttgatttttaaaaagttaaa-tttatcactttttatcatttttcaatatcatatttttatttttatcccttta 338775  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  338774 tccaatgccccaag 338761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 4962625 - 4962514
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| ||| |||||||||||||||||||||| |||| | |||| ||||||| |||||| ||| |||||||  |||||||||||||||||  |||||    
T  4962625 catgtttgtattagtttcaacaacattttgactttaaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttat-tcctta 4962528  T
Q  451 tccaatgccccaag 464  Q
    ||||||| ||||||    
T  4962527 tccaatgtcccaag 4962514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 348 - 449
Target Start/End: Complemental strand, 25568404 - 25568304
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||| |||||||||| |||||||| | | |||| ||||| |||||| ||| || |||| |||||||| |||||||||||||    
T  25568404 taacatgtttgcattggtttcaataacattttgatttttaaaaag-ttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccc 25568306  T
Q  448 tt 449  Q
    ||    
T  25568305 tt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 464
Target Start/End: Original strand, 37243852 - 37243958
Alignment:
Q  356 ttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaa 455  Q
    |||||||| ||||||||||||||| | |||||||| | |||| ||||||| |||||||||| |||||||| ||||||| ||||||||| || ||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttttatttttat-cctttatccaa 37243949  T
Q  456 tgccccaag 464  Q
    |||| ||||    
T  37243950 tgcctcaag 37243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 659
Target Start/End: Original strand, 1738973 - 1739080
Alignment:
Q  546 ttttccaaataacaacaaagaagggaaagatgaaaattagaacaagaacaaagagaaaaatttggattcaaggtctttttcatgtttattttgcaagaga 645  Q
    ||||||||||||||||||  |||||||||||||      |||||||||  | ||||||||  ||||||||||| |||||||||| |||||||||||| ||    
T  1738973 ttttccaaataacaacaataaagggaaagatga------gaacaagaatgaggagaaaaaaatggattcaaggactttttcatgcttattttgcaaggga 1739066  T
Q  646 aaatttgctacttc 659  Q
    |||||| |||||||    
T  1739067 aaattttctacttc 1739080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 662
Target Start/End: Original strand, 1744360 - 1744426
Alignment:
Q  596 aagagaaaaatttggattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcaca 662  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  1744360 aagagaaaaaaatggattcaaggtctttttcatgcttattttgcaagggaaaattttctacttcaca 1744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 438
Target Start/End: Original strand, 12914176 - 12914261
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatt 438  Q
    |||||||||||||||||||||| ||||||| ||||||||  || |||||||||| |||||||||| || |||| |||||||||||||    
T  12914176 atgtttgcattggtttcaacaatattttgatttttaaaa-aattaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 616 - 664
Target Start/End: Original strand, 1724448 - 1724496
Alignment:
Q  616 aggtctttttcatgtttattttgcaagagaaaatttgctacttcacagg 664  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  1724448 aggtctttttcatgcttattttgcaagagaaaattttctacttcacagg 1724496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 440
Target Start/End: Complemental strand, 6823858 - 6823773
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttt 440  Q
    |||||||||| |||||||| ||||| |||||||||| | |||||||||| | ||| |||| | |||| |||| |||||||||||||    
T  6823858 tttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 27535098 - 27535202
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    ||||||||||||| |||||||   |||| ||||||||||   ||||||| |||| |||||||||| || |||||| |||||| |||||||||||  ||||    
T  27535098 atgtttgcattggattcaaca---ttttaacttttaaaaacttaaaattcatcacttttcaccatttttcaatacaatatttatatttttatccttttat 27535194  T
Q  452 ccaatgcc 459  Q
     |||||||    
T  27535195 tcaatgcc 27535202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 432
Target Start/End: Original strand, 39693007 - 39693090
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatt 432  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||| ||| ||||||||||||||| ||||  || |||| |||||||    
T  39693007 taacatgtttgtattgatttcaacaatattttaacttttaaaaagat-aaatttatcattttttaccacttttcaatgctatatt 39693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 10406785 - 10406873
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatt 438  Q
    |||||| |||||||||| |||||||| ||||||| ||| ||||  || |||||||||| ||||| |||| || |||||| |||||||||||    
T  10406785 taacatttttgcattggattcaacaatattttgaatttaaaaa--attaaatttatcacttttctccatttttcaatacaatatttctatt 10406873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 4838278 - 4838320
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaa 390  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  4838278 taacatgtttgcattagtttcaacaatattttgacttttaaaa 4838320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 16899680 - 16899632
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatt 400  Q
    ||||||| ||||| ||||||||||||||||||||||||| | |||||||    
T  16899680 atgtttgtattggattcaacaacattttgacttttaaaaagttaaaatt 16899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 39335474 - 39335512
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaa 390  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  39335474 atgtttgtattggattcaacaacattttgacttttaaaa 39335512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 9e-41; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 35808505 - 35808393
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  35808505 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcacaattttccaatgctatatttctatttttatcccctta 35808407  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  35808406 tccaatgccccaag 35808393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 55669739 - 55669851
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| ||| |||||||||||||||||||||| | |||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  55669739 catgtttgcattgtttttaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatgctatatttctatttttatcccctta 55669837  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  55669838 tccaatgccccaag 55669851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 2362630 - 2362743
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaagga-taaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||| ||||||||||||||||||||||  | | |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  2362630 atgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttatttttatcccctta 2362729  T
Q  451 tccaatgccccaag 464  Q
    ||| ||||||||||    
T  2362730 tccgatgccccaag 2362743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 355 - 464
Target Start/End: Complemental strand, 26040465 - 26040357
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||||| |||||||| |||||||||||||||| | |||| || |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  26040465 tttgcattggcttcaacaatattttgacttttaaaaagttaaactt-atcacttttcaccattttccaatactatatttctatttttatccccttatcca 26040367  T
Q  455 atgccccaag 464  Q
    ||||||||||    
T  26040366 atgccccaag 26040357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 32131139 - 32131247
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | |||| ||||||| || ||||||| ||||||||||||||||||||||||||| |     
T  32131139 taacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaa-tttatcacttatcaccattttccaatactatatttctatttttatctct 32131237  T
Q  448 ttatccaatg 457  Q
    ||||||||||    
T  32131238 ttatccaatg 32131247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 457
Target Start/End: Original strand, 34016626 - 34016730
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||| |||||||||||||||||||||||||| | |||| || |||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  34016626 atgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-ttcatcacttttcaccattttccaatgctatatttctatttttatccccttat 34016724  T
Q  452 ccaatg 457  Q
    ||||||    
T  34016725 ccaatg 34016730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 41956322 - 41956210
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||| ||| |||||||  ||||||||||||||||||| ||||    
T  41956322 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcctctta 41956224  T
Q  451 tccaatgccccaag 464  Q
    ||| ||||||||||    
T  41956223 tccgatgccccaag 41956210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 10100225 - 10100110
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||||||| | |||||||||| ||| |||| ||||||| |||||||||||||    
T  10100225 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttataacttttcaccattttctaatattatatttatatttttatcccc 10100127  T
Q  448 ttatccaatgccccaag 464  Q
    |||||| ||| ||||||    
T  10100126 ttatccgatgtcccaag 10100110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 23765578 - 23765689
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||||| ||||||| ||||||||| |||||||||||||||    
T  23765578 catgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttcaatttttatcccctta 23765676  T
Q  451 tccaatgccccaa 463  Q
    || ||||| ||||    
T  23765677 tctaatgcaccaa 23765689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 457
Target Start/End: Original strand, 51266924 - 51267029
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||| |||||||||||||||||||||||||| | |||| ||||||| |||||||||| || |||||||||||||||||||||||| |||||    
T  51266924 catgtttgtattgatttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatctcctta 51267022  T
Q  451 tccaatg 457  Q
    |||||||    
T  51267023 tccaatg 51267029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 27839415 - 27839303
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||| || |||||||||||||||||||   |||| |||||||||||||| ||| || |||| |||||||||||||||||| ||||||    
T  27839415 catgtttgcattggttttaataacattttgacttttaaaaacttaaa-tttatcatttttcatcatttttcaatgctatatttctatttttattccctta 27839317  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  27839316 tccaatgccccaag 27839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 34316832 - 34316719
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||| ||||||| ||||||| || || ||||  ||||||| |||||||||| |||||    
T  34316832 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatatttttatctcctta 34316733  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  34316732 tccaatgccccaag 34316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 45688743 - 45688855
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||| ||||||| |||||| ||| || |||| |||| ||||||||||||||||||||    
T  45688743 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatgctatgtttctatttttatcccctta 45688841  T
Q  451 tccaatgccccaag 464  Q
    |||||| |||||||    
T  45688842 tccaataccccaag 45688855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 31754938 - 31755049
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||| ||||||| |||||| ||| || |||| |||||||| ||||||||||||||||    
T  31754938 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaattctatatttatatttttatcccctta 31755036  T
Q  451 tccaatgccccaa 463  Q
    |||||| ||||||    
T  31755037 tccaataccccaa 31755049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 348 - 456
Target Start/End: Original strand, 33951697 - 33951804
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||| |||||||||||||||||||| | |||||||| | |||| ||||||| ||||||| || ||||||||||||||||||||||||||||||    
T  33951697 taacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccc 33951795  T
Q  448 ttatccaat 456  Q
    |||| ||||    
T  33951796 ttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 30475426 - 30475529
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||| |||||||| ||||||| | |||| ||||||| |||||||||| || ||||||||||||| |||||||||| ||||||    
T  30475426 atgtttgcattggtttcaacaatattttgacatttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttttatttttatctccttat 30475524  T
Q  452 ccaat 456  Q
    |||||    
T  30475525 ccaat 30475529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 26831894 - 26831783
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| ||||||||||||||| | |||||||| |||||| ||||||| |||| ||||| || ||||| ||||||||||||||||||| ||||    
T  26831894 catgtttgcattg-tttcaacaacattttaatttttaaaaagataaa-tttatcactttttaccattttacaatattatatttctatttttatcctctta 26831797  T
Q  451 tccaatgccccaag 464  Q
    | ||||||||||||    
T  26831796 ttcaatgccccaag 26831783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 451
Target Start/End: Original strand, 20811263 - 20811362
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| ||| |||||||||||||||||||||| | |||| ||||||| |||||||||  |||||||  ||||||||||||||||||||||||    
T  20811263 catgtttgcattgattttaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccaatttccaatgttatatttctatttttatcccctta 20811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 31168135 - 31168246
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||| ||||||||||||||||||||||||||| ||||  || |||||||||| |||||||||| ||||||| ||| | |||||||||||||||||| |    
T  31168135 atgtttacattggtttcaacaacattttgactttaaaaaa-attaaatttatcacttttcaccattttccaatgctaaaattctatttttatccccttgt 31168233  T
Q  452 ccaatgccccaag 464  Q
    | ||||| |||||    
T  31168234 ctaatgctccaag 31168246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 19329037 - 19328950
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattt 439  Q
    ||||||||||||||||||||||| |||||||||||||||| | | ||||||||||  ||||||||| ||||||| ||||||||||||||    
T  19329037 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 19876248 - 19876186
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  19876248 aaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgc 19876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 457
Target Start/End: Complemental strand, 50514722 - 50514618
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||| |||||||||| | | |||||||||| |||| ||||| || ||||  |||||||||| |||||||| ||||    
T  50514722 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttatcactttttaccatttttcaatgttatatttcta-ttttatcctctta 50514625  T
Q  451 tccaatg 457  Q
    |||||||    
T  50514624 tccaatg 50514618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 351 - 431
Target Start/End: Complemental strand, 47188774 - 47188695
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatat 431  Q
    |||||||||||||||||||||||||||||||||||| | | | | |||||||||| |||||||||| ||||||||||||||    
T  47188774 catgtttgcattggtttcaacaacattttgactttttagaag-ttaaatttatcacttttcaccattttccaatactatat 47188695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 463
Target Start/End: Original strand, 54339121 - 54339223
Alignment:
Q  359 cattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    |||||||||||| || ||||||||||||||||  || |||||||||||||| |||||| || ||||  ||||||| |||||||||||| |||||||||||    
T  54339121 cattggtttcaaaaatattttgacttttaaaaa-attaaatttatcatttt-caccatttttcaatgttatatttatatttttatccctttatccaatgc 54339218  T
Q  459 cccaa 463  Q
    |||||    
T  54339219 cccaa 54339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 52341602 - 52341694
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcc 445  Q
    ||||||||||||| ||||||||||||||||||||||||| | | ||||| ||||||||||| ||| |||||| |  |||||||||||| |||||    
T  52341602 atgtttgcattggattcaacaacattttgacttttaaaaag-ttaaattcatcatttttcatcattttccaacataatatttctatttgtatcc 52341694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 35675298 - 35675187
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    ||||||||||||  |||||||| ||||| |||||||||| | |||| || |||| ||||||| || | ||||||| |||||||||||||||||  ||||     
T  35675298 atgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcactatttcccaatacaatatttctatttttatcgtcttaa 35675200  T
Q  452 ccaatgccccaag 464  Q
    |||||||||||||    
T  35675199 ccaatgccccaag 35675187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 51290474 - 51290542
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||| |||||| ||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  51290474 aaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaag 51290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 29462802 - 29462909
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||| |||||| |||||||||||||||||||| ||||  ||||||||  |||||||||| ||| || |||||  |||||| ||||||||||| ||||     
T  29462802 atgtttacattggattcaacaacattttgactttgaaaa-aataaaattcctcatttttcatcatttttcaatataatatttttatttttatcctcttaa 29462900  T
Q  452 ccaatgccc 460  Q
     ||||||||    
T  29462901 acaatgccc 29462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 40436081 - 40436192
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||| ||||||||||||| |||||||  ||||||| | |||| ||||| |||||||| ||| ||  ||| |||| |||  |||||||||||||||    
T  40436081 catgtttgctttggtttcaacaatattttgatatttaaaaagttaaa-tttattatttttcatcattttttaatgctattttttcatttttatcccctta 40436179  T
Q  451 tccaatgccccaa 463  Q
    ||||||| |||||    
T  40436180 tccaatgtcccaa 40436192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 46696026 - 46695960
Alignment:
Q  397 aatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaa 463  Q
    ||||||||| |||||||||| || |||| |||||||| ||||||||||| |||||||||| ||||||    
T  46696026 aatttatcacttttcaccatttttcaatcctatatttttatttttatccacttatccaataccccaa 46695960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 9693446 - 9693380
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaa 463  Q
    ||||||||||||||||||| | ||| |||| ||||| | |||||||||||||||||||||||| ||||    
T  9693446 aaatttatcatttttcacctttttc-aatattatatctttatttttatccccttatccaatgcgccaa 9693380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 458
Target Start/End: Complemental strand, 13498224 - 13498120
Alignment:
Q  353 tgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatc 452  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||| || ||| || || || || ||||||||| |||||||||||||||||  |||| |    
T  13498224 tgtttacattggattcaacaaagttttgacttttaaaaagttaaa-ttcatcgttctttactattttccaatacaatatttctatttttatcatcttaac 13498126  T
Q  453 caatgc 458  Q
    ||||||    
T  13498125 caatgc 13498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 31487765 - 31487833
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||| |||| || || || |||| |||||||| ||||||||||||||||| |||||| |||||    
T  31487765 aaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaag 31487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 390
Target Start/End: Complemental strand, 9693580 - 9693541
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaa 390  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  9693580 catgtttgcattggtttcaacaatatttcgacttttaaaa 9693541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 460
Target Start/End: Complemental strand, 19328777 - 19328748
Alignment:
Q  431 tttctatttttatccccttatccaatgccc 460  Q
    ||||||||||||||||||||||||||||||    
T  19328777 tttctatttttatccccttatccaatgccc 19328748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 27469701 - 27469754
Alignment:
Q  10 tttagtttcttaccttcaaaagatttttacttttcttgttacttgaatgtaaaa 63  Q
    ||||||||| ||||||||||||||||| |||||| |||| | ||| ||||||||    
T  27469701 tttagtttcataccttcaaaagattttcacttttgttgtaatttggatgtaaaa 27469754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 457
Target Start/End: Complemental strand, 35511245 - 35511184
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatg 457  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||| |||  |||| ||||||    
T  35511245 aaattcatcacttttcaccattttccaatacaatatttctattttcatctacttaaccaatg 35511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 27474120 - 27474160
Alignment:
Q  10 tttagtttcttaccttcaaaagatttttacttttcttgtta 50  Q
    |||||||||| |||||||||||||||| |||||| ||||||    
T  27474120 tttagtttctaaccttcaaaagattttcacttttgttgtta 27474160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 9e-41; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 34874567 - 34874679
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  34874567 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgctatatttctatttttatcccctta 34874665  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  34874666 tccaatgccccaag 34874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 932263 - 932151
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| |||||||||||||||||||||||||||  || |||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||    
T  932263 catgtttgcattagtttcaacaacattttgacttttaaaaa-attaaatttataatttttcatcattttccaatgctatatttctatttttatcccctta 932165  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  932164 tccaatgccccaag 932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 22346343 - 22346231
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| ||||||||||||||||  || |||||||||| |||||||||| || ||||||||||||||||||||||| ||||||    
T  22346343 catgtttgcattggtttcaacaatattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaatactatatttctatttttattccctta 22346245  T
Q  451 tccaatgccccaag 464  Q
    ||||| ||||||||    
T  22346244 tccaaagccccaag 22346231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 41147584 - 41147472
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||| || ||||||||| ||||| || |||| |||||||||||||||||||||||||    
T  41147584 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-ttaatcattttttaccatttttcaatgctatatttctatttttatcccctta 41147486  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  41147485 tccaatgccccaag 41147472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 42607430 - 42607326
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| || |||| |||||||| ||||||||||||||||    
T  42607430 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatgctatatttttatttttatcccctta 42607332  T
Q  451 tccaat 456  Q
    ||||||    
T  42607331 tccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 27209826 - 27209715
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||||||||| |||||||||| | |||| ||||||| |||||||||| |||||||  |||||||||||||||||||| ||||    
T  27209826 atgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcaattttcaccattttccaatgttatatttctatttttatccctttat 27209728  T
Q  452 ccaatgccccaag 464  Q
    |||||||||||||    
T  27209727 ccaatgccccaag 27209715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 458
Target Start/End: Complemental strand, 11385908 - 11385810
Alignment:
Q  359 cattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    |||||||||||||||||||||||||||||||| | |||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11385908 cattggtttcaacaacattttgacttttaaaaagttaaa-tttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 11385810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 49508839 - 49508728
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||| |||| |||||||||||||||| | |||| ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||    
T  49508839 catgtttgcattggtttcgacaatattttgacttttaaaaagttaaa-tttatcacttt-caccattttccaatgctatatttctatttttatcccctta 49508742  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  49508741 tccaatgccccaag 49508728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 348 - 456
Target Start/End: Complemental strand, 6170660 - 6170553
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| | || ||||||| ||||||||||||||||||| |     
T  6170660 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttctctattttccaatgctatatttctatttttatctct 6170562  T
Q  448 ttatccaat 456  Q
    |||||||||    
T  6170561 ttatccaat 6170553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 43433776 - 43433887
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    ||||||| |||||||||||||||||||| | |||||||| | |||| ||||||| |||||||||| ||  ||||||||||||||||||||||||||||||    
T  43433776 atgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttttaatactatatttctatttttatccccttat 43433874  T
Q  452 ccaatgccccaag 464  Q
    |||||||||||||    
T  43433875 ccaatgccccaag 43433887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 49901926 - 49902037
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||| |||| || ||||||| | |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  49901926 catgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcctctta 49902024  T
Q  451 tccaatgccccaa 463  Q
    |||||| ||||||    
T  49902025 tccaataccccaa 49902037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 355 - 463
Target Start/End: Complemental strand, 50295535 - 50295428
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    ||||||||| ||||||||| |||||||||||||||| | |||| ||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||    
T  50295535 tttgcattgatttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatactatatttctatttttacccccttatcca 50295437  T
Q  455 atgccccaa 463  Q
    |||||||||    
T  50295436 atgccccaa 50295428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 457
Target Start/End: Complemental strand, 47655477 - 47655372
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||||| || |||| ||||| |||||||||||||||||||    
T  47655477 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaattttcaccatttttcaatgctatacttctatttttatcccctta 47655379  T
Q  451 tccaatg 457  Q
    | |||||    
T  47655378 ttcaatg 47655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 11385981 - 11386093
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||| ||||| ||||||| ||||||||||||||||||||  |||    
T  11385981 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaatttttaccattttccaatgctatatttctatttttatccaatta 11386079  T
Q  451 tccaatgccccaag 464  Q
    || |||| ||||||    
T  11386080 tctaatgtcccaag 11386093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 29966822 - 29966935
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| ||||||||||| ||||  || |||||||||||||||  |||| || |||| |||||||| ||||||||||||||||    
T  29966822 catgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttttatcccctta 29966921  T
Q  451 tccaatgccccaag 464  Q
    |||||||| |||||    
T  29966922 tccaatgctccaag 29966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 33929966 - 33930070
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| ||||||| || || |||| |||||||| ||||||||||||||||    
T  33929966 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcagttttcactatttttcaatgctatatttatatttttatcccctta 33930064  T
Q  451 tccaat 456  Q
    ||||||    
T  33930065 tccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 2125816 - 2125701
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||| ||| ||| |||||| |||||||||||||||||||| | |||| ||||||| ||||||| || || |||| ||||||||||||||||||||||    
T  2125816 taacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaa-tttatcacttttcacaatttttcaatgctatatttctatttttatcccc 2125718  T
Q  448 ttatccaatgccccaag 464  Q
    |||||||||||||||||    
T  2125717 ttatccaatgccccaag 2125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 24140773 - 24140883
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||  |||||||  ||||||||| |||||||| ||||||||||||||||||||||||    
T  24140773 catgtttgcattggtttcaacaacattttgactttaaaaaagttaag-tttatcacgtttcaccattttccaatagtatatttctatttttatcccctta 24140871  T
Q  451 tccaatgccccaa 463  Q
    | |||||||||||    
T  24140872 t-caatgccccaa 24140883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 4940846 - 4940740
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||||| ||||| |||||||||||||||| | |||| ||||||| |||| ||||| ||||||| |||||||||||||||||||||||||    
T  4940846 catgtttgtattggttttaacaatattttgacttttaaaaagttaaa-tttatcacttttaaccattttccaatgctatatttctatttttatcccctta 4940748  T
Q  451 tccaatgc 458  Q
    ||||||||    
T  4940747 tccaatgc 4940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 358 - 464
Target Start/End: Complemental strand, 32213988 - 32213883
Alignment:
Q  358 gcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatg 457  Q
    |||||||||||||||||||||||||||||||||  || |||||||||| |||||||||| |||||||  | |||||||||||||||||||||||| ||||    
T  32213988 gcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatg 32213890  T
Q  458 ccccaag 464  Q
     ||||||    
T  32213889 tcccaag 32213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 353 - 457
Target Start/End: Original strand, 40845253 - 40845356
Alignment:
Q  353 tgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatc 452  Q
    ||||||| ||||||||||||| ||||||| |||||||| | |||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||     
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccccttatt 40845351  T
Q  453 caatg 457  Q
    |||||    
T  40845352 caatg 40845356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 348 - 444
Target Start/End: Original strand, 50154470 - 50154565
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatc 444  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| | ||| || |||| |||||||| ||||||||||    
T  50154470 taacatgtttgcattggtttcaacaacattttaacttttaaaagg-ttaaatttatcattttttatcatttttcaatgctatatttatatttttatc 50154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 459
Target Start/End: Original strand, 52396443 - 52396549
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| ||||||| || |||||||||||||||| | |||| ||||||| |||| | ||| || ||||||||||||||||||||||||||||||    
T  52396443 catgtttgcatttgtttcaataatattttgacttttaaaaagttaaa-tttatcactttt-atcatttttcaatactatatttctatttttatcccctta 52396540  T
Q  451 tccaatgcc 459  Q
    |||||||||    
T  52396541 tccaatgcc 52396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 7190581 - 7190469
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| ||||||||| |||||| |||||||||| | |||| ||||||| |||||| ||| ||  ||| |||||||||||||||||||| ||||    
T  7190581 catgtttgcattagtttcaacaccattttaacttttaaaaagttaaa-tttatcacttttcatcatttttgaatgctatatttctatttttatcctctta 7190483  T
Q  451 tccaatgccccaag 464  Q
     |||||||||||||    
T  7190482 accaatgccccaag 7190469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 464
Target Start/End: Complemental strand, 28851011 - 28850904
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||||||||||||||  ||||||||||||||| | |||| ||||||| |||||||||| |||||||  ||||||||||||||||| | |||||| |    
T  28851011 tttgcattggtttcaacaat-ttttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttatatttctatttttattctcttatcta 28850914  T
Q  455 atgccccaag 464  Q
    ||||||||||    
T  28850913 atgccccaag 28850904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 456
Target Start/End: Complemental strand, 26469687 - 26469584
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||| |||||||||||| || |||||||||||||||| | |||| ||||||||||||||  || || |||| |||||||| |||||||||||| ||||    
T  26469687 atgttttcattggtttcaataatattttgacttttaaaaagttaaa-tttatcatttttcattatttttcaatgctatatttttatttttatccctttat 26469589  T
Q  452 ccaat 456  Q
    |||||    
T  26469588 ccaat 26469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 348 - 456
Target Start/End: Complemental strand, 28277591 - 28277484
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||||||||||||| ||||||||||||||| | |||||||| | | |||||||||| |||| | ||| || ||||  ||||||||||||||||||| |    
T  28277591 taacatgtttgcattgttttcaacaacattttaatttttaaaaag-ttaaatttatcactttttatcatttttcaatgttatatttctatttttatcctc 28277493  T
Q  448 ttatccaat 456  Q
    |||||||||    
T  28277492 ttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 348 - 464
Target Start/End: Original strand, 44286869 - 44286984
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||||||||||||||||| || || ||||| | |||||||| | |||| ||||||||||||||| ||  || |||||| ||||| |||||||||||      
T  44286869 taacatgtttgcattggttttaataatattttaatttttaaaaagttaaa-tttatcatttttcactattctctaatactgtatttttatttttatcctt 44286967  T
Q  448 ttatccaatgccccaag 464  Q
    ||||  |||||||||||    
T  44286968 ttatataatgccccaag 44286984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 372 - 464
Target Start/End: Original strand, 45721773 - 45721864
Alignment:
Q  372 aacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||| |||||||| | |||| ||||||| |||| ||||| |||||||  ||||||| |||||||||| ||||||||||||| |||||    
T  45721773 aacattttgatttttaaaaagttaaa-tttatcagtttttaccattttccaatgttatatttttatttttatcaccttatccaatgctccaag 45721864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 348 - 431
Target Start/End: Original strand, 47895331 - 47895413
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatat 431  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | ||||||||||  ||||||||| || |||||||||||    
T  47895331 taacatgtttgcattagtttcaacaatattttgacatttaaaaag-ttaaatttatcacctttcaccatttttcaatactatat 47895413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 457
Target Start/End: Original strand, 4656020 - 4656121
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||| |||||||||||||||| | |||||||| | |||| ||||||| |||| || || |||||||  ||||||| |||||||||  |||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaa-tttatcactttttactattttccaatgttatatttttatttttatttccttatcca 4656118  T
Q  455 atg 457  Q
    |||    
T  4656119 atg 4656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 5945447 - 5945532
Alignment:
Q  378 ttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    ||||||||||||| | |||||||||||| |||||||||| || ||||   ||||||||||||||||  | ||||||||||| |||||    
T  5945447 ttgacttttaaaaag-taaaatttatcacttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaag 5945532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 418 - 464
Target Start/End: Original strand, 8244154 - 8244200
Alignment:
Q  418 ttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  8244154 ttccaatgttatatttctatatttatccccttatccaatgccccaag 8244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 464
Target Start/End: Original strand, 14331852 - 14331949
Alignment:
Q  366 ttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    ||||||||  ||||||||||||||| | |||| | | |||||||||||||| | ||||||| || ||||||||||||||   ||| |||||||||||||    
T  14331852 ttcaacaatgttttgacttttaaaaagttaaattct-tcatttttcaccatttcccaatacaatgtttctatttttatcattttaaccaatgccccaag 14331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 464
Target Start/End: Original strand, 16691309 - 16691406
Alignment:
Q  366 ttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    ||||||||  ||||||||||||||| | |||| | | |||||||| ||||| | ||||||| || ||||||||||||||  |||| |||||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattct-tcattttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaag 16691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 17402963 - 17403056
Alignment:
Q  366 ttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccc 460  Q
    |||||||| |||||||||||||||| | |||| || |||| |||| ||||| ||  ||||| ||||||  ||||||||||||||| |||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaa-ttcatcactttttaccattttttaatacaatattttaatttttatccccttaaccaatgccc 17403056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 456
Target Start/End: Original strand, 31975484 - 31975591
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||| |||| ||||| ||||||| |||||||| | | ||||||| || |||| | ||| || ||||  ||||||||||||| |||| |     
T  31975484 taacatgtttgcattagttttaacaatattttgatttttaaaaag-ttaaatttaccactttttatcatttttcaatgttatatttctatttatatctct 31975582  T
Q  448 ttatccaat 456  Q
    |||||||||    
T  31975583 ttatccaat 31975591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 48938651 - 48938727
Alignment:
Q  366 ttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatc 444  Q
    ||||||||  ||||||||||||||| |   |||||| ||| |||||||||| ||| ||||| |||||||||||||||||    
T  48938651 ttcaacaatgttttgacttttaaaaagt--aaatttttcacttttcaccattttctaatacaatatttctatttttatc 48938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 458
Target Start/End: Original strand, 30222991 - 30223025
Alignment:
Q  424 tactatatttctatttttatccccttatccaatgc 458  Q
    |||||||||| ||||||||||||||||||||||||    
T  30222991 tactatatttatatttttatccccttatccaatgc 30223025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 43168156 - 43168249
Alignment:
Q  366 ttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccc 460  Q
    ||||||||  ||||||||||||||| | |||| | | ||| |||||||||| | ||||||| || ||||||||||||||  |||| |||||||||    
T  43168156 ttcaacaatgttttgacttttaaaaagttaaactct-tcacttttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccc 43168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 30222624 - 30222697
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatacta 428  Q
    ||||||||||||||||||| ||||| |||||| |||  || |||||||||| ||| || ||| ||| |||||||    
T  30222624 tttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcactttccatcattttctaatacta 30222697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 41492912 - 41493015
Alignment:
Q  354 gtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcc 453  Q
    |||||||| || |||| ||| ||||| |||||||||| | ||||||| |||| |||||||||  | ||||| | ||||||||| |||||||| |||| ||    
T  41492912 gtttgcatgggattcatcaatattttaacttttaaaatg-taaaattcatcacttttcaccacttcccaatgcaatatttcta-ttttatcctcttaacc 41493009  T
Q  454 aatgcc 459  Q
    ||||||    
T  41493010 aatgcc 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 351 - 462
Target Start/End: Original strand, 6999202 - 6999312
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  6999202 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatactatatttctatttttatctcctta 6999300  T
Q  451 tccaatgcccca 462  Q
    |||| |||||||    
T  6999301 tccattgcccca 6999312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 765258 - 765147
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||| || |||||||  |||||||||||||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatccccttat 765160  T
Q  452 ccaatgccccaag 464  Q
    |||||||||||||    
T  765159 ccaatgccccaag 765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 355 - 457
Target Start/End: Original strand, 2966544 - 2966645
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||    
T  2966544 tttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttatatttctatttttatccccttatcca 2966642  T
Q  455 atg 457  Q
    |||    
T  2966643 atg 2966645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 460
Target Start/End: Original strand, 862589 - 862697
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| ||||||||| |||||| | |||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  862589 catgtttgcattggtttcaacaagattttgactcttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcccatta 862687  T
Q  451 tccaatgccc 460  Q
    | ||||||||    
T  862688 ttcaatgccc 862697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 39401643 - 39401532
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||||||||||| |||||||||||||||| | ||||  |||||| |||||||||| || ||||  ||||||||||||||||||||||||    
T  39401643 catgtttgtattggtttcaacaaaattttgacttttaaaaagttaaa--ttatcacttttcaccatttttcaatgttatatttctatttttatcccctta 39401546  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  39401545 tccaatgccccaag 39401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 348 - 464
Target Start/End: Original strand, 16361563 - 16361678
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||| |||||||||||||||||| || | |||| ||||||| |||| ||||| |||||||  ||||||||||||||||| |||    
T  16361563 taacatgtttgcattggtttcgacaacattttgacttttataaagttaaa-tttatcaatttttaccattttccaatgttatatttctatttttattccc 16361661  T
Q  448 ttatccaatgccccaag 464  Q
    ||||||||||| |||||    
T  16361662 ttatccaatgctccaag 16361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 27495124 - 27495235
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||||| ||| |||  ||||||| |||||||||||||||||    
T  27495124 atgtttgcattggtttcaacaacattttgatttttaaaatgttaaa-tttatcacttttcaccattttctaatgttatatttttatttttatccccttat 27495222  T
Q  452 ccaatgccccaag 464  Q
     ||||||||||||    
T  27495223 tcaatgccccaag 27495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 17603811 - 17603923
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| |||||| ||||||||||||||||||| | |||| |||||||||||| | ||| || |||| ||||||||||||||||||| | |||    
T  17603811 catgtttgcattgatttcaataacattttgacttttaaaaagttaaa-tttatcattttttatcatttttcaatgctatatttctatttttatcgcgtta 17603909  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  17603910 tccaatgccccaag 17603923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 33726380 - 33726492
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||| ||||||||| ||||| ||||||| || | |||| ||||| |||||||||||| || ||||||||||||| ||||||||||||||||    
T  33726380 catgtttgtattgatttcaacaatattttaacttttagaaagttaaa-tttattatttttcaccatttttcaatactatatttttatttttatcccctta 33726478  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  33726479 tccaatgccccaag 33726492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 39085901 - 39085789
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||| ||||||| |||| | ||| |||||||  |||||||||||||||||||| |||    
T  39085901 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttatcattttccaatgttatatttctatttttatcccttta 39085803  T
Q  451 tccaatgccccaag 464  Q
    ||||||| ||||||    
T  39085802 tccaatgtcccaag 39085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 41436478 - 41436582
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | || ||||||| |||||| ||| || ||||||||||||| ||||||||||||||||    
T  41436478 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaagtttatcacttttcatcatttttcaatactatatttttatttttatcccctta 41436576  T
Q  451 tccaat 456  Q
    | ||||    
T  41436577 ttcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 17118484 - 17118377
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||| |||||||||||||||||||||||| || |||||||| | |||| |||||||||||||| ||| ||||| || ||||||||||||||||||||     
T  17118484 taacatatttgcattggtttcaacaacattt-gagttttaaaaagttaaa-tttatcatttttcaacattttccagtattatatttctatttttatccct 17118387  T
Q  448 ttatccaatg 457  Q
    ||||||||||    
T  17118386 ttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 1321168 - 1321280
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||| ||||| ||||||||||||||||| |||||||  | |||| ||||| |||||| ||||| |||||||  ||||||||||||||||||| ||||    
T  1321168 catgtttacattgatttcaacaacattttgatttttaaagagttaaa-tttattattttttaccattttccaatgttatatttctatttttatcctctta 1321266  T
Q  451 tccaatgccccaag 464  Q
    |||||||| |||||    
T  1321267 tccaatgctccaag 1321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 33864352 - 33864460
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | | |||||||| | |||||||||| ||||||| | |||||| ||||||||||| |    
T  33864352 taacatatttgcattggtttcaacaatattttgacttttaaaatg-ttaaatttattacttttcaccattttccaatgcgatatttttatttttatcctc 33864450  T
Q  448 ttatccaatg 457  Q
    |||| |||||    
T  33864451 ttattcaatg 33864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 35445400 - 35445291
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||||||||||| |||||||||||| |||   | |||||||||| |||||||||| || ||||  ||||||| ||||||||||||||||    
T  35445400 catgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttttatcccctta 35445301  T
Q  451 tccaatgccc 460  Q
    | ||||||||    
T  35445300 ttcaatgccc 35445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 359 - 463
Target Start/End: Complemental strand, 44299782 - 44299679
Alignment:
Q  359 cattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    ||||||||||||||| |||||||||||||||| | |||| ||||||| |||||||||| || | |  |||||||||||||||||||| |||| |||||||    
T  44299782 cattggtttcaacaatattttgacttttaaaatgttaaa-tttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgc 44299684  T
Q  459 cccaa 463  Q
    |||||    
T  44299683 cccaa 44299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 9201606 - 9201499
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| | |||| ||||||| |||||||||| ||  |||| |||||| ||||||||||| |     
T  9201606 taacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttttaatattatattcctatttttatctca 9201509  T
Q  448 ttatccaatg 457  Q
    ||||||||||    
T  9201508 ttatccaatg 9201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 17095171 - 17095068
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||||| ||  |    |||||||||||||||||||| |||||||    
T  17095171 tttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccat-ttttagagttatatttctatttttatccctttatcca 17095074  T
Q  455 atgccc 460  Q
    ||||||    
T  17095073 atgccc 17095068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 444
Target Start/End: Original strand, 44173120 - 44173211
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatc 444  Q
    ||||||| |||||||||||||||||||| | ||||||||  || ||||||||||||||||| ||| || |||| |||||||||||||||||||    
T  44173120 atgtttgtattggtttcaacaacattttaatttttaaaaa-attaaatttatcatttttcatcatttttcaatgctatatttctatttttatc 44173211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 342 - 452
Target Start/End: Complemental strand, 13998022 - 13997913
Alignment:
Q  342 tcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattttt 441  Q
    ||||| || |||||||| |||| ||||||||| ||||| | |||||||| | |||| ||||||||||||||| || || |||| ||||||||||||||||    
T  13998022 tcttgttagcatgtttgtattgatttcaacaatattttaatttttaaaaagttaaa-tttatcatttttcacaatttttcaatgctatatttctattttt 13997924  T
Q  442 atccccttatc 452  Q
    || ||||||||    
T  13997923 attcccttatc 13997913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 17056162 - 17056059
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||||||||||||||||||||| ||||||||| | | |||||||||| |||||||||| ||  | |  ||||||||| |||||||||| |||||||    
T  17056162 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccat-ttttagtgttatatttctttttttatccctttatcca 17056065  T
Q  455 atgccc 460  Q
    ||||||    
T  17056064 atgccc 17056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 17068609 - 17068506
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||||||||||||||||||||| ||||||||| | | |||||||||| |||||||||| ||  | |  ||||||||| |||||||||| |||||||    
T  17068609 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccat-ttttagtgttatatttctttttttatccctttatcca 17068512  T
Q  455 atgccc 460  Q
    ||||||    
T  17068511 atgccc 17068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 452
Target Start/End: Original strand, 464792 - 464896
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatca-tttttcaccatcttccaatactatatttctatttttatccc 446  Q
    ||||||||||| |||| |||||| |||||||| |||||||||| | ||||| |||||| ||||| ||||| || ||||  ||||||||||||||||||||    
T  464792 taacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaa-ttatcatttttttaccatttttcaatgttatatttctatttttatccc 464890  T
Q  447 cttatc 452  Q
     |||||    
T  464891 tttatc 464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 17074592 - 17074489
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||| ||||||||||||||||| ||||||||| | | |||||||||| |||||||||| ||  | |  |||||||||||||||||||| ||||| |    
T  17074592 tttgcattagtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccat-ttttagtgttatatttctatttttatccctttatcta 17074495  T
Q  455 atgccc 460  Q
    ||||||    
T  17074494 atgccc 17074489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 23685764 - 23685688
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaata 425  Q
    |||||||||||||||| |||||| ||||||||||||||||||| | | |||||||||| ||||| |||| ||||||||    
T  23685764 taacatgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcacttttccccattttccaata 23685688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 11445431 - 11445389
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaa 390  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  11445431 taacatgtttgcattggtttcaacaacattttgacatttaaaa 11445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 351 - 455
Target Start/End: Complemental strand, 34334270 - 34334167
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| ||||| |||||||| ||||| | || ||||| | | || ||| |||||||| ||||| ||| ||||| |||||||||||||||||  ||||    
T  34334270 catgtttgtattggattcaacaatattttaatttgtaaaaagtttaa-tttgtcattttttaccattttcaaatacaatatttctatttttatcatctta 34334172  T
Q  451 tccaa 455  Q
    |||||    
T  34334171 tccaa 34334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 15004927 - 15004987
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttca 412  Q
    |||||||| |||||||||||||||||||| | |||||||| | | |||||||||| ||||||    
T  15004927 catgtttgtattggtttcaacaacattttaatttttaaaaag-ttaaatttatcacttttca 15004987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 396 - 456
Target Start/End: Complemental strand, 43140388 - 43140328
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaat 456  Q
    ||||||||||||||||  ||| || ||||  ||||||| ||||||||||| ||||||||||    
T  43140388 aaatttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaat 43140328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 43567615 - 43567503
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||| ||||||||||||| ||||||||||||| |||||    
T  43567615 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactataattctatttttatctcctta 43567517  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  43567516 tccaatgccccaag 43567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 29034687 - 29034799
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||| ||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  29034687 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttatatttttatcccctta 29034785  T
Q  451 tccaatgccccaag 464  Q
    ||||||||| ||||    
T  29034786 tccaatgcctcaag 29034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 5240441 - 5240329
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||||||| || |||||||||||||||||||||||||| |||    
T  5240441 catgtttgcattggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatcccttta 5240343  T
Q  451 tccaatgccccaag 464  Q
    ||||||||| ||||    
T  5240342 tccaatgcctcaag 5240329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 464
Target Start/End: Original strand, 40763253 - 40763361
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    ||||||||||||||||||||||||| |||||||||| | |||| ||||||| |||||||||| || ||||  ||||||||||||||||||||||||||||    
T  40763253 tttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 40763351  T
Q  455 atgccccaag 464  Q
    ||||||||||    
T  40763352 atgccccaag 40763361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 42222218 - 42222326
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||| |||||||||||||| |||||||||||||||| | |||| ||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  42222218 taacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaataccatatttctatttttatcccc 42222316  T
Q  448 ttatccaatg 457  Q
    ||||| ||||    
T  42222317 ttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 8380442 - 8380553
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||| |||||||||||||||||||||||||||||||| | |||| ||||||| |||||| ||| ||||||| |||||||| |||||||||||||||||    
T  8380442 atgttttcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgctatatttttatttttatccccttat 8380540  T
Q  452 ccaatgccccaag 464  Q
    ||||| |||||||    
T  8380541 ccaataccccaag 8380553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 43958195 - 43958087
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||  || ||||||||||||||||  || |||||||||||||||||| || ||| ||||||||||||||||||||||| ||    
T  43958195 taacatgtttgcattggtttcagtaatattttgacttttaaaaa-attaaatttatcatttttcacaattttctaatactatatttctatttttatcgcc 43958097  T
Q  448 ttatccaatg 457  Q
    ||||||||||    
T  43958096 ttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 8292745 - 8292856
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||| |||||||||||||||||||||||||| |  ||| ||||| | |||||||||| ||||||| |||||||||||||||||||||||||    
T  8292745 catgtttggattgatttcaacaacattttgacttttaaaaaggcaaa-tttataacttttcaccattttccaatgctatatttctatttttatcccctta 8292843  T
Q  451 tccaatgccccaa 463  Q
    |||||||| ||||    
T  8292844 tccaatgctccaa 8292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 27053601 - 27053494
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||| |||||||||||||||| | |||| ||||||| |||||||||| |||  || ||||||||||||||||||||| ||||    
T  27053601 atgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttctgatgctatatttctatttttatccctttat 27053503  T
Q  452 ccaatgccc 460  Q
    |||||||||    
T  27053502 ccaatgccc 27053494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 7323062 - 7322958
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||| || |||   ||||||||||||||||||| ||||    
T  7323062 catgtttgcattggtttcaacaacattttgacttttaaaa-aattaaatttatcacttttcaccatttttcaaggttatatttctatttttatcctctta 7322964  T
Q  451 tccaat 456  Q
    ||||||    
T  7322963 tccaat 7322958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 460
Target Start/End: Original strand, 22521586 - 22521694
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||| | | | |||||||||| || ||| ||| ||||||| ||||||||||| |||||||| ||||    
T  22521586 catgtttgcattggtttcaacaacattttgacttttaagaag-ttaaatttatcacttctcatcattttccaatgctatatttctagttttatcctctta 22521684  T
Q  451 tccaatgccc 460  Q
    ||||||||||    
T  22521685 tccaatgccc 22521694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 24359817 - 24359713
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||| ||||||  |||| ||||| ||||| | |||||||||||||||||||||||||    
T  24359817 catgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatccctttttaccattttccattgctatatttctatttttatcccctta 24359719  T
Q  451 tccaat 456  Q
    ||||||    
T  24359718 tccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 22707049 - 22707159
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||||  || ||||||| |||||||||||||||||| || |||    
T  22707049 catgtttgcattggtttcaacaacatgttaacttttaaaaag-taaaatttatcatttttcattattttccaatgctatatttctatttttat-ccttta 22707146  T
Q  451 tccaatgccccaa 463  Q
    | |||||||||||    
T  22707147 ttcaatgccccaa 22707159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 49069552 - 49069666
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||| |||||||||||||| || |||| |||||||| | || | ||||||| |||||||||| || ||||||||||||||||||||||||  |    
T  49069552 taacatgtttgtattggtttcaacaatatattgatttttaaaaagttaga-tttatcacttttcaccatttttcaatactatatttctatttttatcttc 49069650  T
Q  448 ttatccaatgccccaa 463  Q
    ||||||||||||||||    
T  49069651 ttatccaatgccccaa 49069666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 30538589 - 30538477
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||||||||||||| ||||||||   |||||| |||||||| | |||| ||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  30538589 taacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaa-tttatcatttttcactattttctaatactatatttctatttttatcccc 30538494  T
Q  448 ttatccaatgccccaag 464  Q
    ||||| |||| ||||||    
T  30538493 ttatctaatgtcccaag 30538477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 352 - 462
Target Start/End: Complemental strand, 41188894 - 41188785
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||| |||||||| ||||||||||||||||| | |||| |||||||  ||||||||| ||||||| |||||||| ||||||||||| |||||    
T  41188894 atgtttgcattgatttcaacagcattttgacttttaaaaagttaaa-tttatcacctttcaccattttccaatgctatatttatatttttatcctcttat 41188796  T
Q  452 ccaatgcccca 462  Q
    | |||||||||    
T  41188795 caaatgcccca 41188785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 463
Target Start/End: Complemental strand, 40067021 - 40066915
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||| |||||||| ||||||||||| | |||||||| | |||| |||||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  40067021 tttgtattggttttaacaacatttt-atttttaaaaagttaaa-tttatcatttttcaccatttttcaatattatatttctatttttatccccttatcca 40066924  T
Q  455 atgccccaa 463  Q
    |||| ||||    
T  40066923 atgcaccaa 40066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 356 - 455
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  356 ttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaa 455  Q
    |||||||||||||||||||||||| |||||||||| | |||| ||||||| |||||||||| |||||||  | ||||| |||||||||||||||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 460
Target Start/End: Original strand, 1910244 - 1910351
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||| |||| |||||||||||||||| |||||||||| | |||| |||||||||||||||||| ||| |||  ||||||||||||||||| ||||||    
T  1910244 catgtttacatttgtttcaacaacattttaacttttaaaaagttaaa-tttatcatttttcaccattttctaatgttatatttctatttttat-ccctta 1910341  T
Q  451 tccaatgccc 460  Q
    || |||||||    
T  1910342 tcaaatgccc 1910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 464
Target Start/End: Complemental strand, 48454907 - 48454819
Alignment:
Q  375 attttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||||||||| | |||| ||||||| |||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||    
T  48454907 attttgacttttaaaaagttaaa-tttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaag 48454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 40194826 - 40194920
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccc 446  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||| ||  ||  |||||||||||| ||||||||||||    
T  40194826 catgtttgcattggtttcaacaacattttgacttttaaaa-aattaaatttatcacttttcatcaatttataatactatatttatatttttatccc 40194920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 371 - 464
Target Start/End: Original strand, 36279139 - 36279231
Alignment:
Q  371 caacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    ||||||||||| |||||||| | |||| ||||||| |||||||||| ||||||| |||||||| |||||||||||  |||||||||||||||||    
T  36279139 caacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaag 36279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 348 - 457
Target Start/End: Complemental strand, 46478667 - 46478560
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||| |||||||| |||||||||| ||||| |||||||||| | |||| ||||||||||| ||| || || ||||  |||||||||||||||||||||    
T  46478667 taacatatttgcattagtttcaacaatattttaacttttaaaaagttaaa-tttatcatttt-cactatttttcaatgatatatttctatttttatcccc 46478570  T
Q  448 ttatccaatg 457  Q
    ||||||||||    
T  46478569 ttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 8258746 - 8258640
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||| ||| ||||| |||||| | | |||||||||| |||||||||| || ||     ||||||||||||||||||||||||    
T  8258746 atgtttgcattggtttcaacaaaattatgactattaaaaag-ttaaatttatcacttttcaccatttttca-----atatttctatttttatccccttat 8258653  T
Q  452 ccaatgccccaag 464  Q
    || ||||||||||    
T  8258652 ccgatgccccaag 8258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 5348078 - 5347973
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||   ||||||||||||||| | |||| ||||||| |||||| ||| |||||||  ||||||||||||| ||| ||||||    
T  5348078 catgtttgcattggtttcaaca---ttttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttatattccctta 5347983  T
Q  451 tccaatgccc 460  Q
    | ||||||||    
T  5347982 ttcaatgccc 5347973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 46042749 - 46042838
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttat 443  Q
    ||||||||||||||||||||||||||| |||||| |||| | | |||||||| | |||||||||| || |||||||||||||||||||||||    
T  46042749 atgtttgcattggtttcaacaacatttagactttaaaaaag-ttaaatttataacttttcaccat-tttcaatactatatttctatttttat 46042838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 354 - 451
Target Start/End: Complemental strand, 31626147 - 31626051
Alignment:
Q  354 gtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||||||||| |||||||| | | |||||||||| |||||| ||| ||  |||| ||||||| |||||||||| ||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaag-ttaaatttatcacttttcatcattttttaatattatatttttatttttatctccttat 31626051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 441
Target Start/End: Original strand, 42291284 - 42291371
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcacca-tcttccaatactatatttctattttt 441  Q
    |||||||||| |||||||| ||||| ||||||||||  ||||||||||| ||||||||| | | ||||||||| ||||||||||||||    
T  42291284 tttgcattggattcaacaatattttaacttttaaaaaaataaaatttattatttttcactatttttccaatacaatatttctattttt 42291371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 29687476 - 29687547
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaa 423  Q
    ||||||||||||||||||||||||||||| |||||||||| | | ||||| |||| |||||||||| ||||||    
T  29687476 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 1907697 - 1907593
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    ||||||||||||  |||||||| ||||||| | ||||||  || ||||| || |||||| ||||| || |||||| |||||||| |||||||||  ||||    
T  1907697 atgtttgcattgcattcaacaatattttgattattaaaa-aattaaattcattattttttaccatttttcaatacaatatttctctttttatccttttat 1907599  T
Q  452 ccaatg 457  Q
    ||||||    
T  1907598 ccaatg 1907593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 30388760 - 30388693
Alignment:
Q  360 attggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatacta 428  Q
    |||| |||||| || |||||||||||||||| | |||| |||||||||||||||||| || ||||||||    
T  30388760 attgatttcaataatattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatacta 30388693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 381
Target Start/End: Original strand, 29959068 - 29959097
Alignment:
Q  352 atgtttgcattggtttcaacaacattttga 381  Q
    ||||||||||||||||||||||||||||||    
T  29959068 atgtttgcattggtttcaacaacattttga 29959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 31360357 - 31360309
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatc 444  Q
    |||||||||| |||| ||||| | ||||||| |||||||||||||||||    
T  31360357 aaatttatcactttttaccatttcccaatacaatatttctatttttatc 31360309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 6866915 - 6867026
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||| ||| ||| |||||||| ||||||||||||||||    
T  6866915 catgtttgcattgatttcaacaacattttgacttttaaaaggttaaa-tttatcacttttcaccattttcaaatgctatatttttatttttatcccctta 6867013  T
Q  451 tccaatgccccaa 463  Q
    |||||||||||||    
T  6867014 tccaatgccccaa 6867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 12191493 - 12191604
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||| ||||||||||||||||||||||||||  || |||||||||| |||||||||| | ||||| |||||||||||||||||||| ||||    
T  12191493 catgtttgtattgatttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttaccaatgctatatttctatttttatccactta 12191591  T
Q  451 tccaatgccccaa 463  Q
    |||||||| ||||    
T  12191592 tccaatgcgccaa 12191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 10855443 - 10855544
Alignment:
Q  362 tggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgcccc 461  Q
    ||||||||||||||||||||||||||||| | |||| ||||||| |||||| ||| || ||||| |||||||||||||||||||||||||| ||||||||    
T  10855443 tggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgcccc 10855541  T
Q  462 aag 464  Q
    |||    
T  10855542 aag 10855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 5578274 - 5578386
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| |||||||||| |||||||||||||||| | |||| ||||||| || |||  || || |||| ||||||||||||||||||||||| |    
T  5578274 catgtttgcatttgtttcaacaatattttgacttttaaaaagttaaa-tttatcaattctcattatttttcaatgctatatttctatttttatcccctca 5578372  T
Q  451 tccaatgccccaag 464  Q
    ||||||||| ||||    
T  5578373 tccaatgcctcaag 5578386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 7875290 - 7875201
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattttt 441  Q
    ||||| ||||||||||||||||| |||||||||||||||| | | |||||||||| |||||| ||| ||||||| ||||||||||||||||    
T  7875290 catgtctgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacttttcatcattttccaatgctatatttctattttt 7875201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 374 - 464
Target Start/End: Complemental strand, 29692427 - 29692338
Alignment:
Q  374 cattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||| |||||| | |||| ||||||| |||||||||| || |||||||||||||||||||||||||  |||||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaag 29692338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 26572186 - 26572079
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||| ||||| ||||| ||||||||||  || |||||||||| |||| | ||| ||||     ||||||||||||||||||||||||    
T  26572186 catgtttgcattggttttaacaatattttaacttttaaaat-attaaatttatcactttttatcattttcc-----tatatttctatttttatcccctta 26572093  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  26572092 tccaatgccccaag 26572079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 8324216 - 8324101
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||  |||||||||||||||||||| | |||||||| | |||| ||||||||||||||| || |  |||| |||| ||||||||||||||  |    
T  8324216 taacatgtttatattggtttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcacaatttctcaatgctatgtttctatttttatcttc 8324118  T
Q  448 ttatccaatgccccaag 464  Q
    |||| ||||||||||||    
T  8324117 ttattcaatgccccaag 8324101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 7274326 - 7274212
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| | | |||||||||| |||||  ||| |||||||  ||||||||||| ||||| |||    
T  7274326 taacatgtttgtattgatttcaacaacattttaacttttaaaatg-ttaaatttatcacttttcgtcattttccaatgttatatttctatatttattccc 7274228  T
Q  448 ttatccaatgccccaa 463  Q
    || ||||||| |||||    
T  7274227 ttgtccaatgtcccaa 7274212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 351 - 459
Target Start/End: Complemental strand, 16437691 - 16437592
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| ||||| |||||||||| | ||||         |||||||||| |||||||  ||||||||||||||||||| ||||    
T  16437691 catgtttgcattggtttcaacaatatttttacttttaaaaagttaaa---------ttttcaccattttccaatgttatatttctatttttatccactta 16437601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 460
Target Start/End: Original strand, 28014638 - 28014743
Alignment:
Q  354 gtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcc 453  Q
    ||||||||||| |||||||| ||||| |||||||||| | | ||| | ||||||||||||||| | ||||||| ||||||||| ||||| || |||| ||    
T  28014638 gtttgcattggattcaacaatattttaacttttaaaaag-tcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaacc 28014736  T
Q  454 aatgccc 460  Q
    |||||||    
T  28014737 aatgccc 28014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 351 - 395
Target Start/End: Original strand, 32786069 - 32786113
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggata 395  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  32786069 catgtttgcattggtttcaacaacattttgacttttaaaaagata 32786113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 7880536 - 7880447
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattttt 441  Q
    ||||| || ||| |||||||||| |||||||||||||||| | |||| ||||||| |||||| ||| ||| ||| ||||||||||||||||    
T  7880536 catgtctgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcattttctaatgctatatttctattttt 7880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 32786260 - 32786327
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||  |||||||||| |||||||  ||||||||||||||||| |||||||||||| |||||||    
T  32786260 aaatttatctcttttcaccattttccaatgttatatttctatttttat-cccttatccaataccccaag 32786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 27127601 - 27127524
Alignment:
Q  366 ttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatc 444  Q
    |||||||| || ||||||||||||| | |||| || ||||||||||||||| |  |||||| |||||||||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaa-ttcatcatttttcaccatttctcaatacaatatttctatttttatc 27127524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 12175561 - 12175652
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcc 445  Q
    |||||||||||||||| || ||| |||| |||||||||| | |||| ||||||| |||| | ||| || ||||||||||||| |||||||||||    
T  12175561 atgtttgcattggttttaataac-ttttaacttttaaaaagttaaa-tttatcagtttttatcatttttcaatactatatttatatttttatcc 12175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 463
Target Start/End: Complemental strand, 31220435 - 31220325
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||   ||||| |||||||| |||||||||| | |||| || |||| |||| ||||| || ||| || ||||||| ||||  |||| |||||    
T  31220435 atgtttgcattttattcaataacattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaaaacgatatttccatttccatcctcttat 31220337  T
Q  452 ccaatgccccaa 463  Q
    ||||||||||||    
T  31220336 ccaatgccccaa 31220325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 12769254 - 12769294
Alignment:
Q  402 atcatttttcaccatcttccaatactatatttctattttta 442  Q
    ||||||||||||||| || ||||| ||||||||||||||||    
T  12769254 atcatttttcaccatttttcaatattatatttctattttta 12769294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 459
Target Start/End: Complemental strand, 36730262 - 36730155
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||| || ||||||||||||| ||||||||||||||||    
T  36730262 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttatatttttatcccctta 36730164  T
Q  451 tccaatgcc 459  Q
    |||||||||    
T  36730163 tccaatgcc 36730155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 4759962 - 4759848
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||| || |||| |||||||||||||||||||||     
T  4759962 taacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgctatatttctatttttatccct 4759864  T
Q  448 ttatccaatgccccaa 463  Q
    ||||||||||| ||||    
T  4759863 ttatccaatgctccaa 4759848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 8715610 - 8715503
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||    
T  8715610 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 8715513  T
Q  451 tccaatgccc 460  Q
    ||||||||||    
T  8715512 tccaatgccc 8715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 9067497 - 9067390
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||    
T  9067497 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 9067400  T
Q  451 tccaatgccc 460  Q
    ||||||||||    
T  9067399 tccaatgccc 9067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 29915683 - 29915572
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||| |||||||||||||||||| | |||| ||||| |||||| ||||| |||||||||||||||| |||||||||||||||||    
T  29915683 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29915585  T
Q  452 ccaatgccccaag 464  Q
    |||| ||||||||    
T  29915584 ccaacgccccaag 29915572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 29964836 - 29964725
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||| |||||||||||||||||| | |||| ||||| |||||| ||||| |||||||||||||||| |||||||||||||||||    
T  29964836 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29964738  T
Q  452 ccaatgccccaag 464  Q
    |||| ||||||||    
T  29964737 ccaacgccccaag 29964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 46317483 - 46317591
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| ||| |||||||  ||||||||||||||||||  |    
T  46317483 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttcatcattttccaatgttatatttctatttttatctac 46317581  T
Q  448 ttatccaatg 457  Q
    ||||||||||    
T  46317582 ttatccaatg 46317591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 348 - 464
Target Start/End: Original strand, 32415566 - 32415681
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||||||| | ||||||| || || |||| |||||||||||||||||||||     
T  32415566 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatgacttttcacaatttttcaatgctatatttctatttttatccct 32415664  T
Q  448 ttatccaatgccccaag 464  Q
    |||||||||||| ||||    
T  32415665 ttatccaatgcctcaag 32415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 44695783 - 44695669
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||||||||||||| ||||||||||||||| | |||||||| | |||| |||||||||||||||||| |||||| | ||||||| |||||||||||||    
T  44695783 taacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcaccattttccaagattatatttatatttttatcccc 44695685  T
Q  448 ttatccaatgccccaa 463  Q
    |||||||||| |||||    
T  44695684 ttatccaatgtcccaa 44695669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 452
Target Start/End: Complemental strand, 12905391 - 12905292
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||| || ||||  ||||||||||||||||||||||||    
T  12905391 catgtttgcattggtttcaacaacattttgacttttaaaatg-ttaaatttatcatttttcaccat-tttcaatgttatatttctatttttatcccctta 12905294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 37509108 - 37509222
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | |||| ||||||| ||||||| || ||||||| ||  ||||| ||||||||||||    
T  37509108 taacatatttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatgctgcatttcaatttttatcccc 37509206  T
Q  448 ttatccaatgccccaa 463  Q
    ||||||||||||||||    
T  37509207 ttatccaatgccccaa 37509222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 44570495 - 44570383
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||| || |||| |||||||||| |||||||  |||||||||||||| ||||| |||    
T  44570495 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaagtt-atcacttttcaccattttccaatgttatatttctattttgatcccttta 44570397  T
Q  451 tccaatgccccaag 464  Q
    || |||||||||||    
T  44570396 tcgaatgccccaag 44570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 10854859 - 10854975
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattttt----atccc 446  Q
    ||||||||||||||||||||||||||||| |||||||||| | | |||||||| | |||||||||| ||||||| ||||||||||| ||||    |||||    
T  10854859 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttattagttttcaccattttccaatgctatatttctacttttatccatccc 10854957  T
Q  447 cttatccaatgccccaag 464  Q
    ||||||||||||||||||    
T  10854958 cttatccaatgccccaag 10854975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 52570783 - 52570872
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattttta 442  Q
    |||||||||||||||||||||| |||||||||||||||| | || | ||||||| |||||||||| |||||||||||||||||||||||||    
T  52570783 atgtttgcattggtttcaacaatattttgacttttaaaaagttata-tttatcacttttcaccattttccaatactatatttctattttta 52570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 35306332 - 35306436
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| |||||| |||||||| |||||||||| | |||| ||||||| |||||| ||| |||||||  ||||||||||||||||||||||||    
T  35306332 catgtttgcattgatttcaataacattttaacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttatcccctta 35306430  T
Q  451 tccaat 456  Q
    ||||||    
T  35306431 tccaat 35306436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 51817421 - 51817313
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| ||| |||||||||| |||||||||||||||| | |||| ||||||| |||||||||| ||||||| |||||||| ||||||||||| ||||    
T  51817421 catgtttgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttatcctctta 51817323  T
Q  451 tccaatgccc 460  Q
    | ||||||||    
T  51817322 ttcaatgccc 51817313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 8847561 - 8847449
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||| ||||| ||||||||| ||||| |||||||||| | |||| || |||| |||| ||||| |||||||  ||||||||||||||||||||||||    
T  8847561 catgtttacattgttttcaacaatattttaacttttaaaaagttaaa-ttaatcactttttaccattttccaatgttatatttctatttttatcccctta 8847463  T
Q  451 tccaatgccccaag 464  Q
    ||||||| ||||||    
T  8847462 tccaatgtcccaag 8847449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 456
Target Start/End: Original strand, 12051038 - 12051142
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| ||||||||||||||| | |||||||| | |||| ||||||||||||||  || || |||||||||||||||||||||||  |||||    
T  12051038 catgtttgcattgttttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcattattttacaatactatatttctatttttatttcctta 12051136  T
Q  451 tccaat 456  Q
    ||||||    
T  12051137 tccaat 12051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 1803932 - 1804000
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    ||||||||||||||| ||| | || ||||| ||||||||||||||||||||||||||||||||||||||    
T  1803932 aaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaag 1804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 464
Target Start/End: Complemental strand, 25102426 - 25102319
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    ||||||||||||||||||| ||||| ||||| ||||   |||  ||||||| |||| ||||| ||||||| ||||||||||||||||||| | |||||||    
T  25102426 tttgcattggtttcaacaatattttaactttaaaaaaattaa--tttatcactttttaccattttccaatgctatatttctatttttatctcattatcca 25102329  T
Q  455 atgccccaag 464  Q
    ||| ||||||    
T  25102328 atgtcccaag 25102319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 45899652 - 45899540
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatca-tttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||| |||||  |||||||| ||||||||||||||||   |||| || |||| ||||||| ||| ||||||||  |||||||||||||||| | ||||    
T  45899652 atgtttacattgaattcaacaatattttgacttttaaaaatttaaa-ttcatcactttttcatcattttccaatataatatttctatttttattctctta 45899554  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  45899553 tccaatgccccaag 45899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 41346346 - 41346386
Alignment:
Q  424 tactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41346346 tactatatttctatttttatccccttatccaatgccccaag 41346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 31647304 - 31647364
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttca 412  Q
    ||||||||||||| |||||| ||||||||||||||||||| | | |||||||||||||||||    
T  31647304 catgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcatttttca 31647364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 436
Target Start/End: Complemental strand, 20227492 - 20227405
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttcta 436  Q
    ||||||||||| ||||||||||| |||||||| |||||||| | | | |||||||||| |||||| ||| || |||| |||||||||||    
T  20227492 taacatgtttgtattggtttcaataacattttaacttttaagaag-ttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 48136776 - 48136720
Alignment:
Q  408 tttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||| || ||||||| |||||||||||||||||| |||||||||||| |||||||    
T  48136776 tttcacaattttccaatgctatatttctatttttattcccttatccaataccccaag 48136720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 659
Target Start/End: Original strand, 2022788 - 2022851
Alignment:
Q  596 aagagaaaaatttggattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttc 659  Q
    ||||||| ||||  ||||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  2022788 aagagaagaattcagattcaaagtctttttcatgttgtttttgcaagagaaaattttctacttc 2022851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 662
Target Start/End: Complemental strand, 3157034 - 3156968
Alignment:
Q  596 aagagaaaaatttggattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcaca 662  Q
    ||||||| |||| ||||||||||||||||||||| |  ||||| |||||| ||||| ||||||||||    
T  3157034 aagagaagaattcggattcaaggtctttttcatgctccttttgtaagagacaattttctacttcaca 3156968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 460
Target Start/End: Complemental strand, 18888 - 18788
Alignment:
Q  359 cattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    |||||| |||||||| ||||| | |||||||| | |||| || |||| |||||||| | | ||||| | |||||||||||||||||| |||| |||||||    
T  18888 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgc 18790  T
Q  459 cc 460  Q
    ||    
T  18789 cc 18788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 610 - 662
Target Start/End: Original strand, 3167250 - 3167302
Alignment:
Q  610 gattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcaca 662  Q
    ||||||| ||||||||||||||  |||||||||||||||||| |||| |||||    
T  3167250 gattcaaagtctttttcatgttgtttttgcaagagaaaattttctacatcaca 3167302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 441
Target Start/End: Complemental strand, 34060873 - 34060786
Alignment:
Q  353 tgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctattttt 441  Q
    |||||||||||  |||||||| ||||| |||||||||| | | ||||| |||| |||||||||| || |||||| |||||| |||||||    
T  34060873 tgtttgcattgaattcaacaatattttaacttttaaaaag-ttaaattcatcacttttcaccatttttcaatacaatatttttattttt 34060786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 41345977 - 41346050
Alignment:
Q  353 tgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatact 427  Q
    ||||||||||||||||||||| ||||| ||||||||||  || |||||||| | ||||||| || || |||||||    
T  41345977 tgtttgcattggtttcaacaatattttaacttttaaaa-aattaaatttattacttttcactatttttcaatact 41346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 11675320 - 11675405
Alignment:
Q  358 gcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccc 446  Q
    ||||||| |||||||| |||||||| ||||||| | |||| ||  |||||||  ||||| || |||||| |||||||||||||||||||    
T  11675320 gcattggattcaacaatattttgacatttaaaaagttaaa-ttcgtcatttt--accatttttcaatacaatatttctatttttatccc 11675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 39436518 - 39436563
Alignment:
Q  405 atttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| || |||||| |||||||||||||||||| ||||    
T  39436518 atttttcaccatttttcaatacaatatttctatttttatcctctta 39436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 19389419 - 19389307
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||| ||||||| | |||||||||||||||| | |||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  19389419 catgtttgcattgttttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 19389321  T
Q  451 tccaatgccccaag 464  Q
    ||||||||||||||    
T  19389320 tccaatgccccaag 19389307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 21016234 - 21016345
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||| | ||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  21016234 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tctatcacttttcaccatttttcaatattatatttctatttttatcccctta 21016332  T
Q  451 tccaatgccccaa 463  Q
    ||||| |||||||    
T  21016333 tccaaagccccaa 21016345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 457
Target Start/End: Complemental strand, 25249450 - 25249345
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||| ||||||| |||||||||| ||||||| |||||||| |||||||| |||||||    
T  25249450 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttaccccctta 25249352  T
Q  451 tccaatg 457  Q
    |||||||    
T  25249351 tccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 352 - 452
Target Start/End: Original strand, 18068963 - 18069062
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    ||||||||||| ||||||||||||||||||| ||||||| | |||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  18068963 atgtttgcattagtttcaacaacattttgacctttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatccccttat 18069061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 45338005 - 45338112
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||| |||| |||||||||| |||||||| | |||| |||||||||||||||||| || ||||  |||||||||||||||||||||||||    
T  45338005 atgtttgcattggtctcaataacattttgatttttaaaaagttaaa-tttatcatttttcaccatttttcaatgttatatttctatttttatccccttat 45338103  T
Q  452 ccaatgccc 460  Q
    |||||||||    
T  45338104 ccaatgccc 45338112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 348 - 462
Target Start/End: Original strand, 6939155 - 6939268
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||||||||| || ||||||| || ||||  |||||||||||||||||| |     
T  6939155 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatctca 6939253  T
Q  448 ttatccaatgcccca 462  Q
    |||| ||||||||||    
T  6939254 ttattcaatgcccca 6939268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 355 - 457
Target Start/End: Original strand, 8018765 - 8018866
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    |||||||| |||| ||||||||||||| |||||||| | |||| ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8018765 tttgcattagttttaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttctatttttatccccttatcca 8018863  T
Q  455 atg 457  Q
    |||    
T  8018864 atg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 4989936 - 4990039
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||   ||||||| ||||||| | |||| ||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  4989936 catgtttgcattggtttcaaca---ttttgacatttaaaaagttaaa-tttatcatttttcactattttccaatgctatatttctatttttatcccctta 4990031  T
Q  451 tccaatgc 458  Q
    ||||||||    
T  4990032 tccaatgc 4990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 455
Target Start/End: Complemental strand, 21016166 - 21016063
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||||| ||||||||||||||||||||||||| | | |||| ||||| |||| ||||| || ||||  ||||||||||||||||||||||||    
T  21016166 catgtttgcattggcttcaacaacattttgacttttaaaaag-ttaaatctatcacttttaaccatttttcaatgttatatttctatttttatcccctta 21016068  T
Q  451 tccaa 455  Q
    |||||    
T  21016067 tccaa 21016063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 451
Target Start/End: Complemental strand, 26195482 - 26195383
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||| |||||||||||||||||||| |||||||||| | |||| ||||||| ||||||| || |||||||  ||||||||||||||||||||||||    
T  26195482 catgtttgtattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatcccctta 26195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 26672799 - 26672894
Alignment:
Q  360 attggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaat 456  Q
    |||||||||||||||||||||||||||||||  || ||||||||| ||||| | ||| ||||||| ||||||||||||||||||||| |||||||||    
T  26672799 attggtttcaacaacattttgacttttaaaaa-attaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 10694811 - 10694911
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatcca 454  Q
    ||||||||| |||||||||||||||||||||||||| | |||| ||||||| |||| ||||| ||  |||||||||||| |||||| |||||||||||||    
T  10694811 tttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttaccatttttaaatactatatttttattttaatccccttatcca 10694909  T
Q  455 at 456  Q
    ||    
T  10694910 at 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 351 - 460
Target Start/End: Original strand, 3174456 - 3174568
Alignment:
Q  351 catgtttgcattggtttcaacaacattt----tgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccc 446  Q
    |||||||| |||||||||||||||||||    |||||||||||| | | |||||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  3174456 catgtttgtattggtttcaacaacatttattttgacttttaaaaag-tcaaatttataatttttcaccattttccaatataatatttctatttttatccc 3174554  T
Q  447 cttatccaatgccc 460  Q
    || |||||| ||||    
T  3174555 ctcatccaacgccc 3174568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 34714030 - 34713924
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatac--tatatttctatttttatcccct 448  Q
    |||||||||||||||||||||||||||||||||||||| | | | |||||||||| ||| |||||| || ||||||  ||||| ||||||||||||||||    
T  34714030 catgtttgcattggtttcaacaacattttgacttttaagaag-tgaaatttatcactttgcaccatttttcaatactatatatatctatttttatcccct 34713932  T
Q  449 tatccaat 456  Q
    ||| ||||    
T  34713931 tattcaat 34713924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 37433267 - 37433369
Alignment:
Q  352 atgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttat 451  Q
    |||||||||||||||||||||||||||| ||||| |||||  | |||||||||| |||||| ||| || ||||  ||||| || ||||||||||||||||    
T  37433267 atgtttgcattggtttcaacaacattttaactttaaaaag--ttaaatttatcacttttcatcatttttcaatgttatatgtcgatttttatccccttat 37433364  T
Q  452 ccaat 456  Q
    |||||    
T  37433365 ccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 351 - 451
Target Start/End: Complemental strand, 14855493 - 14855394
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    |||||||||||| |||| ||||||||||| |||||||||| | |||| ||||||  ||||||| || ||  |||||||||||||||||||||||||||||    
T  14855493 catgtttgcattagttttaacaacattttaacttttaaaatgttaaa-tttatctcttttcactattttttaatactatatttctatttttatcccctta 14855395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 7532829 - 7532893
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccc 460  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  7532829 aaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgccc 7532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 5129545 - 5129459
Alignment:
Q  371 caacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    ||||||||||||||||||||  || |||||||||| |||||| ||| || |||| ||||||||| ||||||||||||||||| |||||    
T  5129545 caacattttgacttttaaaaa-attaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgc 5129459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 44874369 - 44874431
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgc 458  Q
    |||||||||| |||||||||| || ||||  ||||||| ||||||||||||||||||||||||    
T  44874369 aaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttatccaatgc 44874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 33741586 - 33741523
Alignment:
Q  348 taacatgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttca 412  Q
    |||||| ||||||||||||||||||| ||||| |||||||||| | | |||||||||||||||||    
T  33741586 taacatatttgcattggtttcaacaatattttaacttttaaaaag-ttaaatttatcatttttca 33741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 35930180 - 35930248
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaag 464  Q
    |||||||| |||||||| ||| || ||||||||||||| ||||||||||  |||||||||||| |||||    
T  35930180 aaatttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaag 35930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 369 - 444
Target Start/End: Complemental strand, 31596512 - 31596438
Alignment:
Q  369 aacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatc 444  Q
    ||||| |||||||||||||||| | ||||||| ||||||||||||||| ||  || || |||||||||||||||||    
T  31596512 aacaatattttgacttttaaaaag-taaaattcatcatttttcaccattttttaacacaatatttctatttttatc 31596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 450
Target Start/End: Original strand, 26892799 - 26892884
Alignment:
Q  364 gtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||| || ||||| |||||||||| | |||| |||||||||||| || || || ||||| ||||||||||||||||||| ||||    
T  26892799 gtttcaataatattttaacttttaaaaagttaaa-tttatcattttttacaatttttcaatattatatttctatttttatcctctta 26892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 6433548 - 6433635
Alignment:
Q  355 tttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttat 443  Q
    ||||||||||||| ||||| ||||| |||||||||| | | |||||||| | |||| ||||| || |||| |||||||| |||||||||    
T  6433548 tttgcattggttttaacaatattttaacttttaaaaag-ttaaatttataactttttaccatttttcaatgctatatttttatttttat 6433635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 41689098 - 41689126
Alignment:
Q  360 attggtttcaacaacattttgacttttaa 388  Q
    |||||||||||||||||||||||||||||    
T  41689098 attggtttcaacaacattttgacttttaa 41689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 66; Significance: 8e-29; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 16880 - 16773
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | || | ||||||||||||||| || ||| ||| |||||||||||||||||||||||||    
T  16880 catgtttgcattggtttcaacaatattttgacttttaaaaagttaca-tttatcatttttcactattttc-aatgctatatttctatttttatcccctta 16783  T
Q  451 tccaatgccc 460  Q
    ||||||||||    
T  16782 tccaatgccc 16773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 27048 - 26941
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | || | ||||||||||||||| || ||| ||| |||||||||||||||||||||||||    
T  27048 catgtttgcattggtttcaacaatattttgacttttaaaaagttaca-tttatcatttttcactattttc-aatgctatatttctatttttatcccctta 26951  T
Q  451 tccaatgccc 460  Q
    ||||||||||    
T  26950 tccaatgccc 26941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 37214 - 37107
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatatttctatttttatcccctta 450  Q
    ||||||||||||||||||||||| |||||||||||||||| | || | ||||||||||||||| || ||| ||| |||||||||||||||||||||||||    
T  37214 catgtttgcattggtttcaacaatattttgacttttaaaaagttaca-tttatcatttttcactattttc-aatgctatatttctatttttatcccctta 37117  T
Q  451 tccaatgccc 460  Q
    ||||||||||    
T  37116 tccaatgccc 37107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 351 - 431
Target Start/End: Complemental strand, 392241 - 392162
Alignment:
Q  351 catgtttgcattggtttcaacaacattttgacttttaaaaggataaaatttatcatttttcaccatcttccaatactatat 431  Q
    ||||||||||| |||||||||||||||||||||||||||| | | |||||||||| |||| ||||| || |||| ||||||    
T  392241 catgtttgcatcggtttcaacaacattttgacttttaaaaag-ttaaatttatcactttttaccatttttcaatgctatat 392162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 4335 - 4268
Alignment:
Q  396 aaatttatcatttttcaccatcttccaatactatatttctatttttatccccttatccaatgccccaa 463  Q
    |||||||||| ||||||| || ||||||| |||||||| ||||||||||||  ||||||||| |||||    
T  4335 aaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaa 4268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University