View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5824-Insertion-6 (Length: 830)
Name: NF5824-Insertion-6
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5824-Insertion-6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 690; Significance: 0; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 690; E-Value: 0
Query Start/End: Original strand, 7 - 819
Target Start/End: Original strand, 36221056 - 36221872
Alignment:
| Q |
7 |
caggtacaaaacatctgctatgatgctgaagatggatttgagttgcaagacaagnnnnnnncaatttgtgaaagcttctggcagcactcgaatgaaggta |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36221056 |
caggtacaaaacatctgctatgatgctgaagatggatttgagttgcaagacaagaaaaaataaaattgtgaaagcttctggcagcactcgaatgaaggta |
36221155 |
T |
|
| Q |
107 |
tgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaagagattagaaatagattgaataaggtggcagctgacg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
36221156 |
tgccacttgttttcttcctcaaatccactagctttccgttttaggatgtcacataaaatcaaagagattagagatagattgaataaggtggcagctgacg |
36221255 |
T |
|
| Q |
207 |
ggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaattcactcattcatacgttgacgcttcaagtgttattgg |
306 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36221256 |
ggacaaggtttggacttgtgagaatcgatgttgcacctgatcctgttgtgcagaggagagaattcactcattcatacgttgatgcttcaagtgttattgg |
36221355 |
T |
|
| Q |
307 |
gagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaatt--cgtgttattcccatagtt |
404 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36221356 |
gagggagaatgacagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaatttgtgtgttattcccatagtt |
36221455 |
T |
|
| Q |
405 |
ggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatttgg--atgtgtctcaa |
502 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
36221456 |
ggaattggtggcttggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatttgggtgtgtgtctcca |
36221555 |
T |
|
| Q |
503 |
atgattttgatattaggcgcattattatcaaaattatcaactcagcttttgcttcagcatcaactccactaagtgttgctatggctaaccaagaagacat |
602 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36221556 |
atgattttgatattaggcgcattattatcaaaattatcaactctgcttttgcttcagcatcaactccaccaagtgttgctatggctaaccaagaagacat |
36221655 |
T |
|
| Q |
603 |
taaccattttgatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgt |
702 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36221656 |
taaccattttgatattgagcaactacaaattcgtctaagacataaactttctggtcaaaagtttatcctcatcctagatgatatatggaatgatgaccgt |
36221755 |
T |
|
| Q |
703 |
gcaaaatggattgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggta |
802 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
36221756 |
gcaaaatggattgagttgttaaatttgatcaaagttggtggagaagaaagtaaagtcatagtgacgacatgtagtaactcaattgcttccatgatgagta |
36221855 |
T |
|
| Q |
803 |
ttgttccttcgtatatt |
819 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
36221856 |
ctgttccttcgtatatt |
36221872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 816
Target Start/End: Original strand, 36217069 - 36217878
Alignment:
| Q |
13 |
caaaacatctgctatgatgctgaagatg---------gatttgagttgcaagacaagnnnnnnncaatttgtgaaagcttctggcagcactcgaatgaag |
103 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| |||||||||| ||||| || ||||| |
|
|
| T |
36217069 |
caaaacatctgctatgatgctgaagatgtattggatggatttgagttgcaagaca-ggagaaagcaatttgttgaagcttctggaagcacacggttgaag |
36217167 |
T |
|
| Q |
104 |
gtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaagagattagaaatagattgaataaggtggcagctg |
203 |
Q |
| |
|
||||||||||| ||||||||||| ||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
36217168 |
gtatgccacttcttttcttcctctaatccgcttgctttccgttttaggatgtcacgtcaaatcaaagagattagagatagattggataaagtggcagctg |
36217267 |
T |
|
| Q |
204 |
acgggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaattcactcattcatacgttgacgcttcaagtgttat |
303 |
Q |
| |
|
| ||||| | ||||||||||| |||||| |||||| || | | | |||||| | ||||| |||| |||| | |||| | |||||||||||| |
|
|
| T |
36217268 |
atgggaccaagtttggacttgtgagaattcatgttgagcccggactttctgtgcacaatagagaaatcacctattcccatattgatgtttcaagtgttat |
36217367 |
T |
|
| Q |
304 |
tgggagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaattc--gtgttattcccata |
401 |
Q |
| |
|
|| ||||||||||| | ||||| ||||||| | ||||||||| | | ||||||| || ||||| ||||| | | || || |||||||||||||| |
|
|
| T |
36217368 |
aggaagggagaatgacaaggaagcaattatcgagcttttgatggattccgatcctcaaggttatggaaatggtcatagaagtttatgtgttattcccata |
36217467 |
T |
|
| Q |
402 |
gttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatttgg--atgtgtct |
499 |
Q |
| |
|
|| |||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||| ||| |||||||| |
|
|
| T |
36217468 |
gtgggaattggaggattggggaagaccacacttgcaaaattggtgtacaatgataagaggatagatgaagtttttcaattgaagatgtgggcatgtgtct |
36217567 |
T |
|
| Q |
500 |
caaatgattttgatattaggcgcattattatcaaaattatcaactcagcttttgcttcagcatcaactccactaagtgttgctatggctaaccaagaaga |
599 |
Q |
| |
|
| |||||||||||| || | || ||||||||||||||||||| | |||||||||||| | ||| ||||||| |||| ||| ||||||||| |
|
|
| T |
36217568 |
ctgttgattttgatataagacagatcgttatcaaaattatcaactccgtttttgcttcagc------tgcaccaagtgttcctattgctccccaagaaga |
36217661 |
T |
|
| Q |
600 |
cattaaccattttgatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgac |
699 |
Q |
| |
|
| |||||| | ||| |||||||||||||||||| |||||||| |||||| ||||| |||||||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
36217662 |
tagtaaccactgtgacattgagcaactacaaattcatctaagacgtaaactatctggccaaaagtttatcctcgtgctagatgatgtatggaatgatgat |
36217761 |
T |
|
| Q |
700 |
cgtgcaaaatggattgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgg |
799 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||| || |||||||||| | |||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
36217762 |
cgtgcaaaatggattgagttggaagatttgatcaaagttggtgcagtaggaagtaaaattatagtgaccacacgtagcaactcagttgcttccatgatgg |
36217861 |
T |
|
| Q |
800 |
gtattgttccttcgtat |
816 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
36217862 |
gtactgttccttcgtat |
36217878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 72 - 520
Target Start/End: Complemental strand, 36226446 - 36225994
Alignment:
| Q |
72 |
ttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaaga |
171 |
Q |
| |
|
||||| ||||||| |||||||| | ||||||||| |||| || ||||||||||| | ||||| ||||||||||||| |||| || | ||||||||| |
|
|
| T |
36226446 |
ttgtggaagcttcatgcagcactaggatgaaggtacgccaatttttttcttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaaga |
36226347 |
T |
|
| Q |
172 |
gattagaaatagattgaataaggtggcagctgacgggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaattc |
271 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||||| | | || |||||||| | ||||| | |
|
|
| T |
36226346 |
gattagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatg |
36226247 |
T |
|
| Q |
272 |
actcattcatacgttgacgcttcaagtgttattgggagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggag |
371 |
Q |
| |
|
|||||||| ||||||| |||||| ||| || || ||||||||||| ||| | || |||||||| ||||||||||| || |||||||| || |||| | |
|
|
| T |
36226246 |
actcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctg |
36226147 |
T |
|
| Q |
372 |
atggtgacaaaaattcgtgt--tattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatga |
469 |
Q |
| |
|
||||||| |||| || |||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| | ||||| |
|
|
| T |
36226146 |
atggtgataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgttcaacgataagagggttgatga |
36226047 |
T |
|
| Q |
470 |
tattttccaattgaagatttggatgtg--tctcaaatgattttgatattaggc |
520 |
Q |
| |
|
| |||||||||||||||| ||| |||| |||| |||||||||||||||||| |
|
|
| T |
36226046 |
tcttttccaattgaagatgtgggtgtgtatctctgatgattttgatattaggc |
36225994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 550 - 815
Target Start/End: Complemental strand, 32727642 - 32727377
Alignment:
| Q |
550 |
tttgcttcagcatcaactccactaagtgttgctatggctaaccaagaagacattaaccattttgatattgagcaactacaaatttgtctaagacataaac |
649 |
Q |
| |
|
|||||| |||| ||| ||||| ||||||| || | ||| |||||||| |||| ||| | |||||||||||||| ||||||| | || ||||||||||| |
|
|
| T |
32727642 |
tttgctccagcttcagttccaccaagtgtttctcttgctcaccaagaaaacatcaacaactttgatattgagcagctacaaagtcgttaaagacataaac |
32727543 |
T |
|
| Q |
650 |
tttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatggattgagttgttaaatttgatcaaagttggtggagaagg |
749 |
Q |
| |
|
|| ||||||| ||||| | || |||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||| |||| || ||| |
|
|
| T |
32727542 |
ttgctggtcagaagtttttgcttgtcctagacgatatatggaatgatgatcgtgcaaaatggattgagttgatagatttgataaaagtcggtgcagcagg |
32727443 |
T |
|
| Q |
750 |
aagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttccttcgta |
815 |
Q |
| |
|
||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||| | |||| ||||| |
|
|
| T |
32727442 |
aagcaaaatcatagtgacgacacgtagcaactcatttgcttcaatgatgggtactattccctcgta |
32727377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 78 - 463
Target Start/End: Complemental strand, 35982561 - 35982180
Alignment:
| Q |
78 |
aagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaagagattag |
177 |
Q |
| |
|
||||||||||||||||||| | ||||||| ||||||| ||||||||||| ||||||| ||||| ||| |||||||| ||||| ||||||||| ||||| |
|
|
| T |
35982561 |
aagcttctggcagcactcggacgaaggtacgccacttcttttcttcctctaatccacttgcttttcgtcttaggatggcacatcgaatcaaagaaattag |
35982462 |
T |
|
| Q |
178 |
aaatagattgaataaggtggcagctgacgggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaattcactcat |
277 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| | |||||||||| |||||| ||||||| |||| | | ||||||| | ||||||| |||||| |
|
|
| T |
35982461 |
gaatagattagataaggtggcagctgatgggactaagtttggacttatgagaattgatgttgatcctggacatattgtgcaaaaaagagaattgactcat |
35982362 |
T |
|
| Q |
278 |
tcatacgttgacgcttcaagtgttattgggagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtg |
377 |
Q |
| |
|
|| | ||||| |||| ||| || || || ||||| |||||||| ||||||||||| |||||||||| ||| |||||||| || ||||| ||| |
|
|
| T |
35982361 |
tcccatgttgatgctttggatgtgataggaagagagaaggatagggatgaaattatcaagcttttgatgctaccacatcctcaaggtgatggtgat---- |
35982266 |
T |
|
| Q |
378 |
acaaaaattcgtgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggat |
463 |
Q |
| |
|
| || | ||||||||||||| || |||||||| || |||| ||||| |||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
35982265 |
aaaagcttatgtgttattcccattgtgggaattggaggtttgggaaagactacacttgcaaaattggttttcaatgatgagaggat |
35982180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 78 - 463
Target Start/End: Complemental strand, 36003973 - 36003592
Alignment:
| Q |
78 |
aagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaagagattag |
177 |
Q |
| |
|
||||||||||||||||||| | ||||||| ||||||| ||||||||||| ||||||| ||||| ||| |||||||| ||||| ||||||||| ||||| |
|
|
| T |
36003973 |
aagcttctggcagcactcggacgaaggtacgccacttcttttcttcctctaatccacttgcttttcgtcttaggatggcacatcgaatcaaagaaattag |
36003874 |
T |
|
| Q |
178 |
aaatagattgaataaggtggcagctgacgggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaattcactcat |
277 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| | |||||||||| |||||| ||||||| |||| | | ||||||| | ||||||| |||||| |
|
|
| T |
36003873 |
gaatagattagataaggtggcagctgatgggactaagtttggacttatgagaattgatgttgatcctggacatattgtgcaaaaaagagaattgactcat |
36003774 |
T |
|
| Q |
278 |
tcatacgttgacgcttcaagtgttattgggagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtg |
377 |
Q |
| |
|
|| | ||||| |||| ||| || || || ||||| |||||||| ||||||||||| |||||||||| ||| |||||||| || ||||| ||| |
|
|
| T |
36003773 |
tcccatgttgatgctttggatgtgataggaagagagaaggatagggatgaaattatcaagcttttgatgctaccacatcctcaaggtgatggtgat---- |
36003678 |
T |
|
| Q |
378 |
acaaaaattcgtgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggat |
463 |
Q |
| |
|
| || | ||||||||||||| || |||||||| || |||| ||||| |||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
36003677 |
aaaagcttatgtgttattcccattgtgggaattggaggtttgggaaagactacacttgcaaaattggttttcaatgatgagaggat |
36003592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 69 - 383
Target Start/End: Complemental strand, 35973868 - 35973554
Alignment:
| Q |
69 |
aatttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaa |
168 |
Q |
| |
|
|||||||| | |||||||||||||| | ||||||||| || |||| ||||| ||||| ||||||| | |||||||| ||| ||| ||| | ||||| |
|
|
| T |
35973868 |
aatttgtggatgcttctggcagcacgagcatgaaggtaagctacttcttttcctcctccaatccacttgttttccgttctagaatggaccatcagatcaa |
35973769 |
T |
|
| Q |
169 |
agagattagaaatagattgaataaggtggcagctgacgggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaa |
268 |
Q |
| |
|
|| ||| | |||| ||| ||||||| ||||| || |||| | |||||| ||||||| |||||| || ||||| | |||| |||| ||| ||||| |
|
|
| T |
35973768 |
aggcattcgggataggttggataaggtagcagccgatgggaacaagtttggtcttgcgaaaatcgacaatggtcctgaacttgttttgcataggagagaa |
35973669 |
T |
|
| Q |
269 |
ttcactcattcatacgttgacgcttcaagtgttattgggagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatg |
368 |
Q |
| |
|
|| ||| |||| | || || ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||| || |||| |
|
|
| T |
35973668 |
ttgactaattcccatgtcgatgcttcaagtgttattgggagggagaatgatagggaagaaattatcaagcttctgatgcaaccacgtcctcaaggtgatg |
35973569 |
T |
|
| Q |
369 |
gagatggtgacaaaa |
383 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
35973568 |
gagacggtgataaaa |
35973554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 69 - 383
Target Start/End: Complemental strand, 35995280 - 35994966
Alignment:
| Q |
69 |
aatttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaa |
168 |
Q |
| |
|
|||||||| | |||||||||||||| | ||||||||| || |||| ||||| ||||| ||||||| | |||||||| ||| ||| ||| | ||||| |
|
|
| T |
35995280 |
aatttgtggatgcttctggcagcacgagcatgaaggtaagctacttcttttcctcctccaatccacttgttttccgttctagaatggaccatcagatcaa |
35995181 |
T |
|
| Q |
169 |
agagattagaaatagattgaataaggtggcagctgacgggacaaggtttggacttgcgagaatcgatgttgcacctgatcctgttgtgcagaggtgagaa |
268 |
Q |
| |
|
|| ||| | |||| ||| ||||||| ||||| || |||| | |||||| ||||||| |||||| || ||||| | |||| |||| ||| ||||| |
|
|
| T |
35995180 |
aggcattcgggataggttggataaggtagcagccgatgggaacaagtttggtcttgcgaaaatcgacaatggtcctgaacttgttttgcataggagagaa |
35995081 |
T |
|
| Q |
269 |
ttcactcattcatacgttgacgcttcaagtgttattgggagggagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatg |
368 |
Q |
| |
|
|| ||| |||| | || || ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||| || |||| |
|
|
| T |
35995080 |
ttgactaattcccatgtcgatgcttcaagtgttattgggagggagaatgatagggaagaaattatcaagcttctgatgcaaccacgtcctcaaggtgatg |
35994981 |
T |
|
| Q |
369 |
gagatggtgacaaaa |
383 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
35994980 |
gagacggtgataaaa |
35994966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 613 - 816
Target Start/End: Complemental strand, 35982017 - 35981814
Alignment:
| Q |
613 |
gatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatgga |
712 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||| | |||||||| | || || | |||||| | |||||||||| ||||||||||||| |
|
|
| T |
35982017 |
gatattgagcaactacaaactcgtctaagacataaactttccagacaaaagtttttacttgtgttggatgatgtgcggaatgatgatcgtgcaaaatgga |
35981918 |
T |
|
| Q |
713 |
ttgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttccttc |
812 |
Q |
| |
|
|||||||| | |||||||||||||||| | || ||||| ||| | | ||||| |||||||||||||||||| |||| ||||||||| ||||||| | |
|
|
| T |
35981917 |
ttgagttgaaagatttgatcaaagttggcgcagctggaagcaaaattttggtgactacacgtagtaactcaatttcttcgatgatgggtgatgttcctcc |
35981818 |
T |
|
| Q |
813 |
gtat |
816 |
Q |
| |
|
|||| |
|
|
| T |
35981817 |
gtat |
35981814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 613 - 816
Target Start/End: Complemental strand, 36003429 - 36003226
Alignment:
| Q |
613 |
gatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatgga |
712 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||| | |||||||| | || || | |||||| | |||||||||| ||||||||||||| |
|
|
| T |
36003429 |
gatattgagcaactacaaactcgtctaagacataaactttccagacaaaagtttttacttgtgttggatgatgtgcggaatgatgatcgtgcaaaatgga |
36003330 |
T |
|
| Q |
713 |
ttgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttccttc |
812 |
Q |
| |
|
|||||||| | |||||||||||||||| | || ||||| ||| | | ||||| |||||||||||||||||| |||| ||||||||| ||||||| | |
|
|
| T |
36003329 |
ttgagttgaaagatttgatcaaagttggcgcagctggaagcaaaattttggtgactacacgtagtaactcaatttcttcgatgatgggtgatgttcctcc |
36003230 |
T |
|
| Q |
813 |
gtat |
816 |
Q |
| |
|
|||| |
|
|
| T |
36003229 |
gtat |
36003226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 342 - 545
Target Start/End: Complemental strand, 35939622 - 35939415
Alignment:
| Q |
342 |
tgatgcaaccgcatcctcatggagatggagatggtgacaaaaattc--gtgttattcccatagttggaattggtggcctggggaagaccacacttgcaag |
439 |
Q |
| |
|
|||||||||| |||||||| || ||||| |||||||| |||| || ||||||||||||| || |||||||| || | ||||||||||||||||||| |
|
|
| T |
35939622 |
tgatgcaaccacatcctcacggtgatggtgatggtgataaaagtttatgtgttattcccattgtgggaattggaggattagggaagaccacacttgcaaa |
35939523 |
T |
|
| Q |
440 |
gttggtgttcaatgataagaggatagatgatattttccaattgaagatttgg--atgtgtctcaaatgattttgatattaggcgcattattatcaaaatt |
537 |
Q |
| |
|
|||||||||||||||||||||| | || | |||||||||||||||| ||| |||||||| ||||| |||||||| |||| || ||||| ||||| |
|
|
| T |
35939522 |
gttggtgttcaatgataagagggtgaatcaacttttccaattgaagatgtggttgtgtgtctccaatgagtttgatatcaggcagataattattaaaata |
35939423 |
T |
|
| Q |
538 |
atcaactc |
545 |
Q |
| |
|
|||||||| |
|
|
| T |
35939422 |
atcaactc |
35939415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 613 - 810
Target Start/End: Complemental strand, 35977451 - 35977254
Alignment:
| Q |
613 |
gatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatgga |
712 |
Q |
| |
|
||||||| ||||||| || | |||| ||||| |||||||||||||||||||| | |||| ||||||| ||||||||||||| |||||||| ||| |
|
|
| T |
35977451 |
gatattgtgcaactagtaagtcgtctcagacaaaaactttctggtcaaaagtttttagtcgtgttagatgacgtatggaatgatgatcgtgcaaagtggc |
35977352 |
T |
|
| Q |
713 |
ttgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttcct |
810 |
Q |
| |
|
|||| ||| | ||||||| |||||||||| | |||||| ||| | || ||||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
35977351 |
ttgaattgaaagatttgataaaagttggtgcaccaggaagcaaaattatcgtgacaacacgtagtaactcaattgcttcgatgatgggtgatgttcct |
35977254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 613 - 810
Target Start/End: Complemental strand, 35998863 - 35998666
Alignment:
| Q |
613 |
gatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatgga |
712 |
Q |
| |
|
||||||| ||||||| || | |||| ||||| |||||||||||||||||||| | |||| ||||||| ||||||||||||| |||||||| ||| |
|
|
| T |
35998863 |
gatattgtgcaactagtaagtcgtctcagacaaaaactttctggtcaaaagtttttagtcgtgttagatgacgtatggaatgatgatcgtgcaaagtggc |
35998764 |
T |
|
| Q |
713 |
ttgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttcct |
810 |
Q |
| |
|
|||| ||| | ||||||| |||||||||| | |||||| ||| | || ||||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
35998763 |
ttgaattgaaagatttgataaaagttggtgcaccaggaagcaaaattatcgtgacaacacgtagtaactcaattgcttcgatgatgggtgatgttcct |
35998666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 613 - 819
Target Start/End: Complemental strand, 35946788 - 35946582
Alignment:
| Q |
613 |
gatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatgga |
712 |
Q |
| |
|
||||||| ||||||| || | |||||||||| |||||||||||||||||||| | |||| ||||||| ||||||||||||| |||||||| ||| |
|
|
| T |
35946788 |
gatattgtgcaactagtaagtcgtctaagacaaaaactttctggtcaaaagtttttagtcgtgttagatgacgtatggaatgatgatcgtgcaaagtggc |
35946689 |
T |
|
| Q |
713 |
ttgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttccttc |
812 |
Q |
| |
|
|||| ||| | ||||||| |||||||||| | |||||| ||| | || ||||| ||||| |||||| |||||||||| ||||||||| ||||||| | |
|
|
| T |
35946688 |
ttgaattgaaagatttgataaaagttggtgcaccaggaagcaaaattatggtgacaacacgcagtaacgcaattgcttcgatgatgggtgatgttcctcc |
35946589 |
T |
|
| Q |
813 |
gtatatt |
819 |
Q |
| |
|
|||||| |
|
|
| T |
35946588 |
atatatt |
35946582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 35977999 - 35977867
Alignment:
| Q |
72 |
ttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaaga |
171 |
Q |
| |
|
|||||||||||||| | |||| || |||||||| ||||||| ||||||||||| ||||||| | |||||||||||||||| ||| | |||||||||| |
|
|
| T |
35977999 |
ttgtgaaagcttctcgaagcagacgggtgaaggtacgccacttcttttcttcctctaatccacttgttttccgttttaggatggcacgtcaaatcaaaga |
35977900 |
T |
|
| Q |
172 |
gattagaaatagattgaataaggtggcagctga |
204 |
Q |
| |
|
|||||| ||||| || |||||||||||||||| |
|
|
| T |
35977899 |
gattagggatagaatggataaggtggcagctga |
35977867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 35999411 - 35999279
Alignment:
| Q |
72 |
ttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaaga |
171 |
Q |
| |
|
|||||||||||||| | |||| || |||||||| ||||||| ||||||||||| ||||||| | |||||||||||||||| ||| | |||||||||| |
|
|
| T |
35999411 |
ttgtgaaagcttctcgaagcagacgggtgaaggtacgccacttcttttcttcctctaatccacttgttttccgttttaggatggcacgtcaaatcaaaga |
35999312 |
T |
|
| Q |
172 |
gattagaaatagattgaataaggtggcagctga |
204 |
Q |
| |
|
|||||| ||||| || |||||||||||||||| |
|
|
| T |
35999311 |
gattagggatagaatggataaggtggcagctga |
35999279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 37 - 201
Target Start/End: Complemental strand, 35958578 - 35958415
Alignment:
| Q |
37 |
gatggatttgagttgcaagacaagnnnnnnncaatttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccacca |
136 |
Q |
| |
|
||||||||||| |||||||||||| ||| ||||| |||||||||| ||||| || |||||||| ||||||||||||||||||| ||| ||| |
|
|
| T |
35958578 |
gatggatttgacttgcaagacaagcgaaaa-caagttgtggaagcttctggaagcacacgggtgaaggtacgccacttgttttcttcctctaattcactt |
35958480 |
T |
|
| Q |
137 |
gctttccgttttaggatgtcacataaaatcaaagagattagaaatagattgaataaggtggcagc |
201 |
Q |
| |
|
||||||||||||| ||| | || |||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
35958479 |
gctttccgttttaaaatggcgcaccaaatcaaagagattagggatagattggataaggtggcagc |
35958415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 327 - 497
Target Start/End: Complemental strand, 35958295 - 35958123
Alignment:
| Q |
327 |
aaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaat-tc-gtgttattcccatagttggaattggtggcctggggaa |
424 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||| |||||||| |||||||| || | | || |||| ||||| ||||| |||||||| || |||| || |
|
|
| T |
35958295 |
aaattatcaatcttttgatgcagccacatcctcgcggagatggtgatggtgataatagtctctgtgtcattccaatagtgggaattggaggtttgggaaa |
35958196 |
T |
|
| Q |
425 |
gaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatttggatgtgt |
497 |
Q |
| |
|
||| |||||||||| || ||||||||||||||||||||| ||| | ||||||| |||||||| ||| ||||| |
|
|
| T |
35958195 |
gacaacacttgcaaagtcggtgttcaatgataagaggatggatcaacttttccagttgaagatgtgggtgtgt |
35958123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 459
Target Start/End: Complemental strand, 35965738 - 35965669
Alignment:
| Q |
390 |
gttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataaga |
459 |
Q |
| |
|
|||||||||||| | |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35965738 |
gttattcccatactaggaattggtggcttggggaagaccacacttgcaaacttggtgttcaatgataaga |
35965669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 35947339 - 35947207
Alignment:
| Q |
72 |
ttgtgaaagcttctggcagcactcgaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaaga |
171 |
Q |
| |
|
|||||||||||||| | ||||| || ||||| || |||||| ||||||||||| ||||||| | ||| |||||||||||| ||| | |||||||||| |
|
|
| T |
35947339 |
ttgtgaaagcttctcgaagcacacgggtgaagttagtccacttcttttcttcctctaatccacttgtttttcgttttaggatggcacgtcaaatcaaaga |
35947240 |
T |
|
| Q |
172 |
gattagaaatagattgaataaggtggcagctga |
204 |
Q |
| |
|
|||||| ||||| || |||||||||||||||| |
|
|
| T |
35947239 |
gattagggatagaatggataaggtggcagctga |
35947207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 333 - 497
Target Start/End: Complemental strand, 35947084 - 35946918
Alignment:
| Q |
333 |
tcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaat-tc-gtgttattcccatagttggaattggtggcctggggaagaccac |
430 |
Q |
| |
|
|||| ||||||||||| || |||||||| || ||||| |||||||| || | | || |||| ||||| ||||| |||||||| || || |||||||||| |
|
|
| T |
35947084 |
tcaatcttttgatgcagccacatcctcacggcgatggtgatggtgataatagtctctgtgtcattccaatagtgggaattggaggtttgtggaagaccac |
35946985 |
T |
|
| Q |
431 |
acttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatttggatgtgt |
497 |
Q |
| |
|
|||||| | || |||||||||||||||||||||| || | ||||||| |||||||| ||| ||||| |
|
|
| T |
35946984 |
acttgcgaagtcggtgttcaatgataagaggatacatcaacttttccagttgaagatgtgggtgtgt |
35946918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 801
Target Start/End: Complemental strand, 35957963 - 35957808
Alignment:
| Q |
646 |
aaactttctggtcaaaagttcatcctcgtcctagatgatatatggaatgatgaccgtgcaaaatggattgagttgttaaatttgatcaaagttggtggag |
745 |
Q |
| |
|
|||||||||||||||||||| | | || ||||||| ||||||||||||| |||||||| ||| |||| ||| | | ||||| |||||||||| | |
|
|
| T |
35957963 |
aaactttctggtcaaaagtttttagttgtgttagatgacgtatggaatgatgatcgtgcaaagtggcttgaattgatcgaattgataaaagttggtgcac |
35957864 |
T |
|
| Q |
746 |
aaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggt |
801 |
Q |
| |
|
|||||| ||| | || ||||| ||||| ||||||||||||||||| ||||||||| |
|
|
| T |
35957863 |
caggaagcaaaattatcgtgacaacacgcagtaactcaattgcttcaatgatgggt |
35957808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 35977687 - 35977578
Alignment:
| Q |
388 |
gtgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagat |
487 |
Q |
| |
|
|||| ||||| ||||| |||||||| || ||||||||||||| |||||| || ||||||||||||||||||||| ||| | ||||||| |||||||| |
|
|
| T |
35977687 |
gtgtcattccaatagtgggaattggaggtttggggaagaccaccattgcaaagtcggtgttcaatgataagaggatggatcaacttttccagttgaagat |
35977588 |
T |
|
| Q |
488 |
ttggatgtgt |
497 |
Q |
| |
|
||| ||||| |
|
|
| T |
35977587 |
gtgggtgtgt |
35977578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 35999099 - 35998990
Alignment:
| Q |
388 |
gtgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagat |
487 |
Q |
| |
|
|||| ||||| ||||| |||||||| || ||||||||||||| |||||| || ||||||||||||||||||||| ||| | ||||||| |||||||| |
|
|
| T |
35999099 |
gtgtcattccaatagtgggaattggaggtttggggaagaccaccattgcaaagtcggtgttcaatgataagaggatggatcaacttttccagttgaagat |
35999000 |
T |
|
| Q |
488 |
ttggatgtgt |
497 |
Q |
| |
|
||| ||||| |
|
|
| T |
35998999 |
gtgggtgtgt |
35998990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 816
Target Start/End: Complemental strand, 35939306 - 35939131
Alignment:
| Q |
645 |
taaactttctggtcaaaagttcatcctcgtcctagatgatatatggaat----gatgaccgtgcaaaatggattgagttgttaaatttgatcaaagttgg |
740 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||||||| ||||||||| ||||| ||| ||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
35939306 |
taaactttctggtcaaaagtttttactcgtgttagatgacatatggaatgatggatgatcgttcaaaatggattgagttgaaagatttgataaaagttgg |
35939207 |
T |
|
| Q |
741 |
tggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgcttccatgatgggtattgttccttcgtat |
816 |
Q |
| |
|
|| || | | ||| |||| ||||| ||||| ||||| || |||||||| |||| ||| | |||||| |||||| |
|
|
| T |
35939206 |
cacagtagaatgcaaaatcattgtgacaacacgcagtaaatcgattgcttcaatgacgggcactgttccctcgtat |
35939131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 29602987 - 29602879
Alignment:
| Q |
389 |
tgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatt |
488 |
Q |
| |
|
||||||||| || ||||||||||| ||| |||| ||||| |||||||||| | |||||||||||||||||| |||| || | ||||| ||| ||||| |
|
|
| T |
29602987 |
tgttattcctattgttggaattggaggcttgggaaagactacacttgcaaagacggtgttcaatgataagagtttagacgagactttcccattaaagatg |
29602888 |
T |
|
| Q |
489 |
tggatgtgt |
497 |
Q |
| |
|
||| ||||| |
|
|
| T |
29602887 |
tgggtgtgt |
29602879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 389 - 460
Target Start/End: Original strand, 29750307 - 29750378
Alignment:
| Q |
389 |
tgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagag |
460 |
Q |
| |
|
||||||||| || ||||||||||| ||| |||| ||||| |||||||||| | |||||||||||||||||| |
|
|
| T |
29750307 |
tgttattcctattgttggaattggaggcttgggaaagactacacttgcaaagacggtgttcaatgataagag |
29750378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 388 - 487
Target Start/End: Complemental strand, 35955281 - 35955182
Alignment:
| Q |
388 |
gtgttattcccatagttggaattggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagat |
487 |
Q |
| |
|
|||||||||||||| | || ||||| || |||| |||||||||||||||| ||| |||||||||||| | ||| | ||| | |||||| |||||||||| |
|
|
| T |
35955281 |
gtgttattcccataataggtattggaggattgggaaagaccacacttgcaaagttagtgttcaatgatgaaagggtggatcaaattttcaaattgaagat |
35955182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 590 - 809
Target Start/End: Complemental strand, 18118086 - 18117867
Alignment:
| Q |
590 |
accaagaagacattaaccattttgatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatg |
689 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| ||||||| | |||| |||| |||||||| |||| ||| ||| | || || ||||||||||||| |
|
|
| T |
18118086 |
accaagaaaacataaaccattttgatattgagcagctacaaagtcgtctgagacgtaaactttatggtaaaaggtttttacttgtgttagatgatatatg |
18117987 |
T |
|
| Q |
690 |
gaatgatgaccgtgcaaaatggattgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgct |
789 |
Q |
| |
|
||||||||| ||| ||||||||| |||||| | ||||||| |||||||| || |||||| |||||||| | ||| ||||| || ||||||||||| |
|
|
| T |
18117986 |
gaatgatgattgtgtaaaatggatcgagttgaaagatttgattaaagttggcacagtaggaagcaaagtcatggcgacaacacgcagcaactcaattgca |
18117887 |
T |
|
| Q |
790 |
tccatgatgggtattgttcc |
809 |
Q |
| |
|
|| |||||||||| |||||| |
|
|
| T |
18117886 |
tcgatgatgggtactgttcc |
18117867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 311 - 497
Target Start/End: Complemental strand, 18126019 - 18125831
Alignment:
| Q |
311 |
gagaatgatagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaat---tcgtgttattcccatagttgga |
407 |
Q |
| |
|
|||| |||||||||||| |||||||| |||||||||||| | ||||||||||| ||||| |||||||| |||| | || |||||||||||| || ||| |
|
|
| T |
18126019 |
gagagtgatagggaagagattatcaagcttttgatgcaagcacatcctcatggtgatggtgatggtgataaaagtctatc-tgttattcccatggtggga |
18125921 |
T |
|
| Q |
408 |
attggtggcctggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagatttggatgtgt |
497 |
Q |
| |
|
||||||||| |||||||||||||| | |||| | | || |||||||||||||| |||||||| | || ||||||||||| ||| ||||| |
|
|
| T |
18125920 |
attggtggcttggggaagaccacattggcaaagcttgttttcaatgataagagaatagatgaactctttcaattgaagatgtgggtgtgt |
18125831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 418 - 544
Target Start/End: Complemental strand, 18118266 - 18118138
Alignment:
| Q |
418 |
tggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttccaattgaagattt--ggatgtgtctcaaatgattttgatat |
515 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||| ||||||||||| ||||| |||| ||||||||||| | | |||||||| ||| ||||| |||| |
|
|
| T |
18118266 |
tggggaagaccacacttgcaaagttggtattcaacgataagaggatcgatgaattttttcaattgaagatgtgagtctgtgtctccaattatttttatat |
18118167 |
T |
|
| Q |
516 |
taggcgcattattatcaaaattatcaact |
544 |
Q |
| |
|
|| || ||| ||||||||||| ||||||| |
|
|
| T |
18118166 |
tatgcacataattatcaaaataatcaact |
18118138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 677 - 809
Target Start/End: Complemental strand, 18125652 - 18125520
Alignment:
| Q |
677 |
tagatgatatatggaatgatgaccgtgcaaaatggattgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtag |
776 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| ||||| |||||| | ||||||| |||||||| | |||||| ||| | || ||||| ||||||| |
|
|
| T |
18125652 |
tagatgatgtatggaatgatgatcgtgcaaagtggatcgagttgaaagatttgataaaagttggcacaagaggaagcaaaattatggtgacaacacgtaa |
18125553 |
T |
|
| Q |
777 |
taactcaattgcttccatgatgggtattgttcc |
809 |
Q |
| |
|
||||||||||||||| |||||||||| |||||| |
|
|
| T |
18125552 |
taactcaattgcttcgatgatgggtaatgttcc |
18125520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 18126234 - 18126105
Alignment:
| Q |
96 |
gaatgaaggtatgccacttgttttcttcctcaaatccaccagctttccgttttaggatgtcacataaaatcaaagagattagaaatagattgaataaggt |
195 |
Q |
| |
|
||||||||||| ||||||| || | |||||| ||| ||| ||||| ||| |||||||| || | |||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
18126234 |
gaatgaaggtacgccacttcttctgttcctccaattcacttgcttttcgtcttaggatggcaaaacaaattaaagatattagggatagattggataaggt |
18126135 |
T |
|
| Q |
196 |
ggcagctgacgggacaaggtttggacttgc |
225 |
Q |
| |
|
||| | || ||||| | |||||||||||| |
|
|
| T |
18126134 |
agcaaccgatgggactaagtttggacttgc |
18126105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 590 - 800
Target Start/End: Original strand, 26328685 - 26328895
Alignment:
| Q |
590 |
accaagaagacattaaccattttgatattgagcaactacaaatttgtctaagacataaactttctggtcaaaagttcatcctcgtcctagatgatatatg |
689 |
Q |
| |
|
|||||||| ||||| | || ||||||||||||||| || | | |||| |||||||| ||||| ||| ||||||| | |||||| ||||||||||||| |
|
|
| T |
26328685 |
accaagaaaacattgaacactttgatattgagcaattagtgagtcgtcttagacataagctttcaggtaaaaagtttgtactcgtcttagatgatatatg |
26328784 |
T |
|
| Q |
690 |
gaatgatgaccgtgcaaaatggattgagttgttaaatttgatcaaagttggtggagaaggaagtaaagtcatagtgacgacacgtagtaactcaattgct |
789 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||| | || |||| |||||||||| || || ||| ||| || ||||||| ||||||||||||| |||||| |
|
|
| T |
26328785 |
ggatgataaccgttcaaaatggattgagttgaaagatctgataaaagttggtgcagtagaaagcaaaatcttagtgacaacacgtagtaacttgattgct |
26328884 |
T |
|
| Q |
790 |
tccatgatggg |
800 |
Q |
| |
|
|| |||||||| |
|
|
| T |
26328885 |
tcgatgatggg |
26328895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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