View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5824_high_51 (Length: 220)
Name: NF5824_high_51
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5824_high_51 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 31786620 - 31786755
Alignment:
| Q |
85 |
tttacaatacactttggtgaagtacttcaaatatgtataacttttattactttttaatgaaagaaacttctattacaccactcaaagtaactttacacat |
184 |
Q |
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| T |
31786620 |
tttacactacactttggtgaagtacttcaaatatgtataacttttattactttttaatgaaagaaacttctattacaccactcaaagtaactttacacat |
31786719 |
T |
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| Q |
185 |
gcccctccactaatacaacatacatattttattcat |
220 |
Q |
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| T |
31786720 |
gcccctccactaatacaacatacatattttattcat |
31786755 |
T |
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