View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5824_low_45 (Length: 242)
Name: NF5824_low_45
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5824_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 25046843 - 25047083
Alignment:
| Q |
1 |
tagtagtatttatttgtatcatgtgatactactagaaaccaaattgtgcaaggaagcttttcttattgctatttgagcatctcccatcaaaagaaaataa |
100 |
Q |
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| T |
25046843 |
tagtagtatttatttgtatcatgtgatactactagaaaccaaattgtgcaaggaagcttttcttattgctatttgagcatctcccatcaaaagaaaataa |
25046942 |
T |
|
| Q |
101 |
gaaatctaaagttgattttacaagtgatgcaatgtcactcataaacaatcaaagttactacttttaggaacatttttagcattttccttaattaaattat |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
25046943 |
gaaatctaaagttgattttacaactgatgcaatgtcactcataaacaatcaaagttactacttttaggaacatttttagcatttttcttaattaaattag |
25047042 |
T |
|
| Q |
201 |
aaaatttcaaacaacctcttaaggtatactcattttcattt |
241 |
Q |
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||||||| ||||||||||||||||||||||||||||||||| |
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| T |
25047043 |
aaaattttaaacaacctcttaaggtatactcattttcattt |
25047083 |
T |
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