View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5824_low_55 (Length: 205)
Name: NF5824_low_55
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5824_low_55 |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 1810408 - 1810586
Alignment:
| Q |
20 |
cacatcgagtctgtattattcctcttcatcttctttattatcaaccctaaccctaattctaactcttttctatctatctatctatt-tttcagcttcgcg |
118 |
Q |
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| T |
1810408 |
cacatcgagtctgtattattcctcttcatcttctttattatcaatcctcaccctaattctaactcttttctatctatctatctattgtttcagcttcgcg |
1810507 |
T |
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| Q |
119 |
gagttgatggattatgatcctcgcattgctcgcctcatcttttctcaatccaatacatatctccaatattttgatgatg |
197 |
Q |
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| T |
1810508 |
gagttgatggattatgatcctcgcattgctcgcctcatcttttctcaatccaatacatatctccaatattttgatgatg |
1810586 |
T |
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