View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5825_low_12 (Length: 260)

Name: NF5825_low_12
Description: NF5825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5825_low_12
NF5825_low_12
[»] chr5 (29 HSPs)
chr5 (24-260)||(30454201-30454437)
chr5 (24-260)||(30459259-30459495)
chr5 (24-260)||(30444829-30445065)
chr5 (22-260)||(24422229-24422467)
chr5 (22-260)||(18568990-18569229)
chr5 (22-260)||(24412780-24413018)
chr5 (22-260)||(22489137-22489375)
chr5 (23-260)||(4635897-4636134)
chr5 (22-209)||(42732575-42732761)
chr5 (22-260)||(13815371-13815606)
chr5 (22-212)||(33955498-33955687)
chr5 (31-250)||(24244050-24244267)
chr5 (31-250)||(24290674-24290891)
chr5 (22-212)||(11223376-11223564)
chr5 (56-212)||(22118134-22118291)
chr5 (22-212)||(20035999-20036188)
chr5 (39-209)||(5600580-5600749)
chr5 (39-209)||(5610226-5610395)
chr5 (28-212)||(20834431-20834614)
chr5 (22-189)||(26652642-26652808)
chr5 (22-189)||(26924227-26924393)
chr5 (39-209)||(31150651-31150820)
chr5 (24-105)||(22448330-22448411)
chr5 (22-105)||(37514857-37514940)
chr5 (24-80)||(22457666-22457722)
chr5 (39-94)||(16111002-16111058)
chr5 (37-101)||(718954-719018)
chr5 (37-101)||(727934-727998)
chr5 (37-101)||(6331671-6331735)
[»] chr4 (18 HSPs)
chr4 (22-260)||(26812460-26812698)
chr4 (22-260)||(26821927-26822165)
chr4 (22-260)||(3242285-3242523)
chr4 (22-260)||(54689911-54690149)
chr4 (22-260)||(54699342-54699580)
chr4 (22-260)||(37059038-37059276)
chr4 (22-260)||(3918018-3918256)
chr4 (23-260)||(15842897-15843134)
chr4 (22-212)||(20884447-20884636)
chr4 (22-212)||(50516496-50516685)
chr4 (22-212)||(11482315-11482504)
chr4 (39-209)||(23622919-23623088)
chr4 (22-210)||(18125410-18125595)
chr4 (22-80)||(28256097-28256155)
chr4 (37-101)||(112634-112698)
chr4 (37-101)||(14917028-14917092)
chr4 (143-211)||(21667753-21667822)
chr4 (143-211)||(21676517-21676586)
[»] chr6 (12 HSPs)
chr6 (22-260)||(23895614-23895852)
chr6 (22-260)||(18420503-18420741)
chr6 (22-210)||(14102308-14102497)
chr6 (22-212)||(22066293-22066482)
chr6 (26-212)||(23884492-23884677)
chr6 (24-190)||(10259779-10259945)
chr6 (22-211)||(17512221-17512408)
chr6 (24-174)||(11421451-11421600)
chr6 (22-164)||(12173469-12173610)
chr6 (47-165)||(23110242-23110359)
chr6 (111-205)||(13218359-13218453)
chr6 (83-209)||(12415064-12415190)
[»] chr3 (21 HSPs)
chr3 (22-260)||(24794544-24794782)
chr3 (22-260)||(28367651-28367889)
chr3 (22-260)||(28375469-28375707)
chr3 (22-260)||(28383291-28383529)
chr3 (22-260)||(28351718-28351956)
chr3 (23-260)||(38529176-38529413)
chr3 (22-260)||(4951546-4951783)
chr3 (27-212)||(5385690-5385874)
chr3 (24-212)||(13328278-13328465)
chr3 (22-212)||(23487041-23487232)
chr3 (22-212)||(46305572-46305760)
chr3 (39-209)||(17529877-17530046)
chr3 (39-209)||(32877870-32878039)
chr3 (39-209)||(54624655-54624824)
chr3 (39-209)||(48978670-48978835)
chr3 (39-209)||(48988210-48988375)
chr3 (22-124)||(7783987-7784089)
chr3 (39-165)||(19388809-19388936)
chr3 (127-210)||(7784110-7784194)
chr3 (22-210)||(4361514-4361699)
chr3 (61-105)||(24285493-24285537)
[»] scaffold0028 (3 HSPs)
scaffold0028 (22-260)||(94429-94667)
scaffold0028 (22-260)||(103870-104108)
scaffold0028 (37-101)||(82272-82336)
[»] scaffold0040 (2 HSPs)
scaffold0040 (22-260)||(30821-31059)
scaffold0040 (23-260)||(9997-10230)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-260)||(408280-408518)
[»] chr7 (16 HSPs)
chr7 (22-260)||(7592958-7593196)
chr7 (22-260)||(15174492-15174730)
chr7 (22-212)||(14634776-14634965)
chr7 (22-212)||(14644476-14644665)
chr7 (22-212)||(33292175-33292364)
chr7 (31-250)||(11634337-11634554)
chr7 (22-212)||(15947371-15947560)
chr7 (22-211)||(32817997-32818185)
chr7 (22-212)||(9736946-9737135)
chr7 (24-210)||(19352589-19352775)
chr7 (24-175)||(13874423-13874572)
chr7 (22-138)||(48710005-48710121)
chr7 (39-206)||(4306573-4306739)
chr7 (144-212)||(48711401-48711469)
chr7 (37-101)||(607218-607282)
chr7 (37-101)||(616313-616377)
[»] scaffold0482 (1 HSPs)
scaffold0482 (22-260)||(3485-3723)
[»] chr8 (25 HSPs)
chr8 (22-260)||(7789076-7789314)
chr8 (22-260)||(20714021-20714259)
chr8 (22-260)||(18143427-18143662)
chr8 (24-209)||(31575411-31575595)
chr8 (24-260)||(25051063-25051296)
chr8 (22-212)||(42712176-42712365)
chr8 (27-250)||(18883163-18883384)
chr8 (24-260)||(25037026-25037259)
chr8 (31-250)||(18232890-18233107)
chr8 (31-250)||(18242341-18242558)
chr8 (22-212)||(20030179-20030368)
chr8 (22-212)||(20044818-20045007)
chr8 (22-211)||(12925355-12925543)
chr8 (31-250)||(18251792-18252009)
chr8 (22-212)||(12767631-12767822)
chr8 (22-259)||(4843720-4843956)
chr8 (24-175)||(33592134-33592284)
chr8 (24-175)||(33601773-33601923)
chr8 (22-171)||(12915500-12915648)
chr8 (26-211)||(24096077-24096262)
chr8 (25-212)||(15833950-15834137)
chr8 (34-171)||(24634009-24634145)
chr8 (22-89)||(20714417-20714484)
chr8 (49-175)||(42896174-42896299)
chr8 (27-85)||(26194048-26194106)
[»] chr2 (13 HSPs)
chr2 (22-260)||(31710464-31710702)
chr2 (22-258)||(24022740-24022976)
chr2 (22-260)||(14273157-14273394)
chr2 (22-212)||(35877516-35877705)
chr2 (22-212)||(35885005-35885194)
chr2 (22-212)||(36724718-36724907)
chr2 (39-209)||(1800493-1800662)
chr2 (26-212)||(3396923-3397108)
chr2 (39-209)||(22632402-22632571)
chr2 (39-209)||(1790999-1791164)
chr2 (22-197)||(18578700-18578875)
chr2 (36-105)||(16446670-16446739)
chr2 (22-94)||(29911278-29911350)
[»] chr1 (11 HSPs)
chr1 (22-212)||(5378422-5378613)
chr1 (24-260)||(15809976-15810217)
chr1 (22-212)||(14272016-14272205)
chr1 (23-212)||(40999034-40999224)
chr1 (28-212)||(14281888-14282071)
chr1 (22-209)||(26906244-26906431)
chr1 (22-198)||(21633594-21633769)
chr1 (24-175)||(21919431-21919581)
chr1 (36-212)||(3470949-3471124)
chr1 (25-212)||(30676788-30676976)
chr1 (27-168)||(28310018-28310155)
[»] scaffold0010 (1 HSPs)
scaffold0010 (27-250)||(256921-257142)
[»] scaffold0206 (1 HSPs)
scaffold0206 (22-212)||(2109-2298)
[»] scaffold0021 (3 HSPs)
scaffold0021 (22-212)||(124047-124236)
scaffold0021 (39-198)||(99994-100152)
scaffold0021 (144-212)||(143169-143237)
[»] scaffold0269 (1 HSPs)
scaffold0269 (39-209)||(14830-14999)
[»] scaffold0247 (1 HSPs)
scaffold0247 (39-209)||(24593-24762)
[»] scaffold0334 (1 HSPs)
scaffold0334 (24-175)||(12548-12698)
[»] scaffold0053 (1 HSPs)
scaffold0053 (22-175)||(2259-2411)
[»] scaffold0233 (1 HSPs)
scaffold0233 (212-260)||(26309-26357)
[»] scaffold0223 (1 HSPs)
scaffold0223 (49-212)||(27078-27246)
[»] scaffold0096 (1 HSPs)
scaffold0096 (37-101)||(49501-49565)


Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 30454201 - 30454437
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30454201 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 30454300  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  30454301 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaa 30454400  T
Q  224 agaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30454401 agaaaggttggaattttctatctcaaaactattaagc 30454437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 30459259 - 30459495
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30459259 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 30459358  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  30459359 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattatcaacctcggcaggcttatacaattctttgcacactagcaaa 30459458  T
Q  224 agaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30459459 agaaaggttggaattttctatctcaaaactattaagc 30459495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 30444829 - 30445065
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30444829 aataacacaggagagttatcctgattcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 30444928  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  30444929 ttctgactagcactacaatttcttgatcacaccagatcagtccataacacctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaa 30445028  T
Q  224 agaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30445029 agaaaggttggaattttctatctcaaaactattaagc 30445065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 24422467 - 24422229
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24422467 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 24422368  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  24422367 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 24422268  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  24422267 aaagaaaggttggaattttctatctcaaaactattaagc 24422229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 18569229 - 18568990
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18569229 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 18569130  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  18569129 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 18569030  T
Q  222 aaagaaaggatggaattttctatctc-aaaactattaagc 260  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  18569029 aaagaaaggttggaattttctatctcaaaaactattaagc 18568990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 24413018 - 24412780
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24413018 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 24412919  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  24412918 acttctgactagcactacaatttcttgatcacaccagatcagtctgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 24412819  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  24412818 aaagaaaggttggaattttctatctcaaaactattaagc 24412780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 22489375 - 22489137
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22489375 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 22489276  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    |||| |||||||||||| ||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||  ||| ||||||||||||||||||||||    
T  22489275 acttatgactagcactataagatcttgatcacaccagatcagtccgttacacctgtattatcaacctcagcagacttctacaattctttgcacactagca 22489176  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  22489175 aaagaaaggttggaattttctatctcaaaactattaagc 22489137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 4636134 - 4635897
Alignment:
Q  23 gaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaa 122  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  4636134 gaataacacatgagagttatcctggttcaccaaacccggctattttcagtccccacacctcacgtgagattatccactatagttgtcttgctaacagaaa 4636035  T
Q  123 cttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaa 222  Q
    |||||||| ||||||| ||  |||||||||||||| |||||||||| |||||||| || |||||||||||| |||| |||||||||||||||||||||||    
T  4636034 cttctgaccagcactataagatcttgatcacaccatatcagtccgttacacctgttttatcaacctcagcaggcttctacaattctttgcacactagcaa 4635935  T
Q  223 aagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||| | |||||||||||||||||||||||||||||    
T  4635934 aagaaatgttggaattttctatctcaaaactattaagc 4635897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 42732575 - 42732761
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||  ||||  ||||    
T  42732575 agaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agctagtagaa 42732673  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctt 209  Q
    |||||| |||||||||| ||  |||||||||||||||||||||||  ||| |||||||| ||||||||| || |||| ||||||||||    
T  42732674 acttctaactagcactataaggtcttgatcacaccagatcagtccagaacccctgtattatcaacctcaacaggcttctacaattctt 42732761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 13815371 - 13815606
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| |||  ||| |   ||    
T  13815371 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggt---ag 13815467  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacacta 218  Q
    |||||||| || | ||||| ||  ||||||||||||||||||| || ||||| | |||||| ||||||||| || ||||  ||||||||||||  |||||    
T  13815468 aaacttctaaccaacactataaggtcttgatcacaccagatcattctgtaacccttgtattatcaacctcaacaggcttcttacaattctttg--cacta 13815565  T
Q  219 gcaaaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||||||||| |||||||||||||||  ||||||||||||    
T  13815566 gcaaaagaaaggttggaattttctatct-taaactattaagc 13815606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 33955498 - 33955687
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  33955498 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 33955594  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||| ||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  33955595 aaacttctaaccaacactataaggtcttgatcacaccagatcagtacgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 33955687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 24244050 - 24244267
Alignment:
Q  31 caggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgac 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |  ||||||||||| |     
T  24244050 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agttggcagaaacttctaat 24244148  T
Q  131 tagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaaagaaag 229  Q
     | ||||||||  ||||||||||||| |||||||  |||||  ||||||| |||||||||||| | ||  ||||||||||||  ||||||||||||||||    
T  24244149 caacactacaacgtcttgatcacacccgatcagtttgtaacctctgtattatcaacctcagcaggattcttacaattctttg--cactagcaaaagaaag 24244246  T
Q  230 gatggaattttctatctcaaa 250  Q
    | |||||||||||||||||||    
T  24244247 gttggaattttctatctcaaa 24244267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 24290674 - 24290891
Alignment:
Q  31 caggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgac 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |  ||||||||||| |     
T  24290674 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agttggcagaaacttctaat 24290772  T
Q  131 tagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaaagaaag 229  Q
     | ||||||||  ||||||||||||| |||||||  |||||  ||||||| |||||||||||| | ||  ||||||||||||  ||||||||||||||||    
T  24290773 caacactacaacgtcttgatcacacccgatcagtttgtaacctctgtattatcaacctcagcaggattcttacaattctttg--cactagcaaaagaaag 24290870  T
Q  230 gatggaattttctatctcaaa 250  Q
    | |||||||||||||||||||    
T  24290871 gttggaattttctatctcaaa 24290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 11223564 - 11223376
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc-ttgctaacaga 120  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| | |  || |   |||    
T  11223564 agaataacacaaaagagttatcctggttcaccaaactcggctacttccagtccccacacttcgtgtgagattatccattatagtatacagtggt---aga 11223468  T
Q  121 aacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    ||||||| || | ||||| ||  |||||||||||||||||||||| ||||| |||||||| |||||||||||| |||| |||||||||||||    
T  11223467 aacttctaaccaacactataaggtcttgatcacaccagatcagtctgtaacccctgtattatcaacctcagcaggcttctacaattctttgc 11223376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 212
Target Start/End: Original strand, 22118134 - 22118291
Alignment:
Q  56 acccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttcttgatcacac 155  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||| ||  ||||||||||||    
T  22118134 acccgactacttccagtccccacacctcgtgtgagattatccattatagttgtcttgctaacagaaacttctgaataacactataaggtcttgatcacac 22118233  T
Q  156 cagatcagtccgtaaca-cctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||||| || ||| |||||||| ||||| |||||| |||| ||||||| |||||    
T  22118234 cagatcagtctgttacatcctgtattatcaacatcagcatgcttctacaattatttgc 22118291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 20036188 - 20035999
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| | |  ||| |   ||    
T  20036188 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagtatacagttggt---ag 20036092  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||| ||||  || |||| ||||||| |||| |||| |||||||||||||    
T  20036091 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccataaccactatattatcaaccttagcaggcttctacaattctttgc 20035999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 5600749 - 5600580
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||| |||||||||||||||||||||| | || ||||| ||||||||||||| ||||||||    
T  5600749 ttatcctggttcgcctaacc-ggctacgtccagtccccacaccacgtgtgagattatccactatag-tatcctgctatcagaaacttctgaatagcacta 5600652  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  5600651 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 5600580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 5610395 - 5610226
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||| |||||||||||||||||||||| | || ||||| ||||||||||||| ||||||||    
T  5610395 ttatcctggttcgcctaacc-ggctacgtccagtccccacaccacgtgtgagattatccactatag-tatcctgctatcagaaacttctgaatagcacta 5610298  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  5610297 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 5610226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 20834614 - 20834431
Alignment:
Q  28 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaactt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |  ||| |   ||||||||    
T  20834614 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagtatgcagttggt---agaaactt 20834518  T
Q  126 ctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    || || | ||||| ||  ||||||||| ||||||||||| ||||||  ||||||  |||||||||||| |||| | |||||||||||    
T  20834517 ctaaccaacactataaggtcttgatcataccagatcagttcgtaaccactgtataatcaacctcagcaggcttctccaattctttgc 20834431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 26652808 - 26652642
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||| |||  ||||| ||||    
T  26652808 agaataacacaggagagttatgctggttcaccaaacctgactacttccagtccccacacttcgtgtgagataatccactatagtattc-agctaatagaa 26652710  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctc 189  Q
    |||||| ||||||||||  |  |||||||||||||| |||||| |  ||| | |||||| ||||||||    
T  26652709 acttctaactagcactattaggtcttgatcacaccatatcagttcagaacccttgtattatcaacctc 26652642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 26924393 - 26924227
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||| |||  ||||| ||||    
T  26924393 agaataacacaggagagttatgctggttcaccaaacctgactacttccagtccccacacttcgtgtgagataatccactatagtattc-agctaatagaa 26924295  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctc 189  Q
    |||||| ||||||||||  |  |||||||||||||| |||||| |  ||| | |||||| ||||||||    
T  26924294 acttctaactagcactattaggtcttgatcacaccatatcagttcagaacccttgtattatcaacctc 26924227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 31150651 - 31150820
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | || |||| ||||||||||||| ||||||||    
T  31150651 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcacta 31150748  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  31150749 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 31150820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 22448330 - 22448411
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagt 105  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22448330 aataacacaagagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 22448411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 37514857 - 37514940
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagt 105  Q
    ||||||||||| |||| |||| |||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37514857 agaataacacatgagatttatactggttcatcaaagccggctacttctagtccccacaccttgtgtgagattatccactatagt 37514940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 22457666 - 22457722
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacac 80  Q
    |||||||||| ||||||||||| ||||||| || |||||||||||||||||||||||    
T  22457666 aataacacagaagagttatccttgttcacccaatccggctacttccagtccccacac 22457722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 16111058 - 16111002
Alignment:
Q  39 ttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagatta 94  Q
    ||||| ||||||||||||  |||||||||||||||||| |||| |||||||||||||    
T  16111058 ttatcatggttcaccaaaagccggctacttccagtcccgacacttcgtgtgagatta 16111002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 718954 - 719018
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  718954 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 719018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 727934 - 727998
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  727934 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 6331671 - 6331735
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  6331671 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 6331735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 26812698 - 26812460
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26812698 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 26812599  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  26812598 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacacctgtattatcaacctcagcaggcttatacaattctttgcacactagca 26812499  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26812498 aaagaaaggttggaattttctatctcaaaactattaagc 26812460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 26822165 - 26821927
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26822165 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 26822066  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  26822065 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacacctgtattatcaacctcagcaggcttatacaattctttgcacactagca 26821966  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26821965 aaagaaaggttggaattttctatctcaaaactattaagc 26821927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 3242285 - 3242523
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3242285 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 3242384  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3242385 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 3242484  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  3242485 aaagaaaggttggaattttctatctcaaaactattaagc 3242523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 54689911 - 54690149
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54689911 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 54690010  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  54690011 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 54690110  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  54690111 aaagaaaggttggaattttctatctcaaaactattaagc 54690149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 54699342 - 54699580
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54699342 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 54699441  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  54699442 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 54699541  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  54699542 aaagaaaggttggaattttctatctcaaaactattaagc 54699580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 37059276 - 37059038
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37059276 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 37059177  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  37059176 acttctgactagcactacaagatcttgatcacaccagatcagtccgttacacctgtattatcaacctcagcaggcttatacaattctttgcacactagca 37059077  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  37059076 aaagaaaggttggaattttctatctcaaaactattaagc 37059038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 3918256 - 3918018
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3918256 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 3918157  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3918156 acttctgactagcattacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 3918057  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  3918056 aaagaaaggttggaattttctttctcaaaactattaagc 3918018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 23 - 260
Target Start/End: Original strand, 15842897 - 15843134
Alignment:
Q  23 gaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaa 122  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15842897 gaataacacaggagagttatcttggttcaccaaactcggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaa 15842996  T
Q  123 cttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaa 222  Q
    |||||||||||||||| ||  ||||||||||| |||||||||| || ||||||||||| ||||||| |||| |||| |||||||||||||||||||||||    
T  15842997 cttctgactagcactataagatcttgatcacatcagatcagtctgttacacctgtattatcaacctaagcaggcttctacaattctttgcacactagcaa 15843096  T
Q  223 aagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||||| || ||||||||||||||||||||||||||    
T  15843097 aagaaaggttgaaattttctatctcaaaactattaagc 15843134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 20884447 - 20884636
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  20884447 agaataacacaggagagttatcctggttccccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 20884543  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  | ||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  20884544 aaacttctaaccaacactataaggttttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 20884636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 50516496 - 50516685
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||  ||| |   ||    
T  50516496 agaataacacaggagagttatcctggttccccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtattccgttggt---ag 50516592  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    ||| |||| || | ||||| ||  |||||||||||||||||||||||||||| | |||||| |||||||||||| |||  |||||||||||||    
T  50516593 aaatttctaaccaacactataaggtcttgatcacaccagatcagtccgtaacccttgtattatcaacctcagcaggctgttacaattctttgc 50516685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 11482504 - 11482315
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||  ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  11482504 agaataacgtaggagagttatcctggttgtccaaacccggctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggt---ag 11482408  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  |||| ||||||||| ||||||||||||| |||||||| |||||||||||  |||| |||||||||||||    
T  11482407 aaacttctaaccaacactataaggtctttatcacaccatatcagtccgtaacccctgtattatcaacctcagccggcttctacaattctttgc 11482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 23623088 - 23622919
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  |||||||||||||||||||||| | || ||||| ||||||||||||| ||||||||    
T  23623088 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatag-tatcctgctatcagaaacttctgaatagcacta 23622991  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | |||||||||||||||||||| || |||| ||||||| |||||||||||| |||| ||| ||||||    
T  23622990 taatatgttgatcacaccagatcagtctgttacactctgtattatcaacctcagcaggcttctacgattctt 23622919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 18125410 - 18125595
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||| ||||| |||| |||||||||||||  ||| |||| || || | ||| |||||||||||||||||||||||| ||||| | || |||||||| ||    
T  18125410 agaatgacacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatag-tatcctgctaacaaaa 18125508  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacc-tgtattgtcaacctcagcaagcttatacaattcttt 210  Q
    |||||| || |||| |  ||    ||||||||| ||||||| || || ||||| |||||| ||||||||||||  ||| | |||||||||    
T  18125509 acttcttaccagcattgaaa---attgatcacaacagatcattctgttacaccttgtattatcaacctcagcagacttcttcaattcttt 18125595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 28256097 - 28256155
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacac 80  Q
    |||||||||||||||| ||||| ||||||| ||||   |||||||| ||||||||||||    
T  28256097 agaataacacaggagatttatcgtggttcatcaaagttggctactttcagtccccacac 28256155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 112698 - 112634
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  112698 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 112634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 14917092 - 14917028
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  14917092 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 14917028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 21667753 - 21667822
Alignment:
Q  143 ttcttgatcacaccagatcagtccgtaacacct-gtattgtcaacctcagcaagcttatacaattctttg 211  Q
    ||||||||||||| |||||||||  | |||| | ||||||||||| |||| |||||| ||||||||||||    
T  21667753 ttcttgatcacactagatcagtctattacacattgtattgtcaacttcagtaagcttctacaattctttg 21667822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 21676517 - 21676586
Alignment:
Q  143 ttcttgatcacaccagatcagtccgtaacacct-gtattgtcaacctcagcaagcttatacaattctttg 211  Q
    ||||||||||||| |||||||||  | |||| | ||||||||||| |||| |||||| ||||||||||||    
T  21676517 ttcttgatcacactagatcagtctattacacattgtattgtcaacttcagtaagcttctacaattctttg 21676586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 23895614 - 23895852
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895614 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 23895713  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  23895714 acttctgactagcactacaatatcttgatcacaccagatcagtccgttacacctgtattatcaacctcagcaggcttatacaattctttgcacactagca 23895813  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  23895814 aaagaaaggttggaattttctatctcaaaactattaagc 23895852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 18420741 - 18420503
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  18420741 agaataacacaggatagttatcctggttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagttttcttgctaacagaa 18420642  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  18420641 acttctgactagcactaacaaatcttgatcacaccagatcagtccgttacacctgtattatcaacctcagcaggcttatacaattctttgcacaatagca 18420542  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  18420541 aaagaaaggttggaattttctatctccaaactattaagc 18420503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 210
Target Start/End: Complemental strand, 14102497 - 14102308
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  14102497 agaataacactgaagaattatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagttgtcttgctaacagaa 14102398  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattgtcaacctcagcaagcttatacaattcttt 210  Q
    |||| |||||||||||  ||  ||||||||||| |||||||| | || ||| |||||||| | ||||||||||  ||| |||||||||||    
T  14102397 acttttgactagcactgtaaggtcttgatcacaacagatcagcctgttacaccctgtattattaacctcagcagacttctacaattcttt 14102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 22066482 - 22066293
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  22066482 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 22066386  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  |||||||||||| |||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  22066385 aaacttctaaccaacactataaggtcttgatcacactagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 22066293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 23884677 - 23884492
Alignment:
Q  26 taacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaac 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |  ||| |   ||||||    
T  23884677 taacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagtatgcagttggt---agaaac 23884581  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  23884580 ttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 23884492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 10259779 - 10259945
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||||||| ||||| ||||||| |||| |||||||||| | || |||||| ||||||    
T  10259779 aataacacaggagaattattctggttcaccaaatccagctacttccagtcctcacacttcgtgtgggattctccactatag-tatcctgctaagagaaac 10259877  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattgtcaacctca 190  Q
    ||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||| | |||||||    
T  10259878 ttctgactagcactataaattcttgatcacaccagatcagtccgttacaccctgtattataaacctca 10259945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 17512221 - 17512408
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||| | |  ||| |   ||    
T  17512221 agaataacacagaagagttatcctggttcaccaaactcggctactttcagtccccacacttcttgtgagattatccactatagtatacagttggt---ag 17512317  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttg 211  Q
    |||||||| || | ||||| ||  |||||||||||| ||||||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||    
T  17512318 aaacttctaaccaacactataaagtcttgatcacactagatcagtctgtaac-cctgtattatcaaccttagcaggcttctacaattctttg 17512408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 11421451 - 11421600
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||||| || | ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||| |||     
T  11421451 aataacacaagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatag-tatcatgttaacaaaaaa 11421549  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacc 174  Q
    ||||||||| ||||| ||  |||||||||||||||||||||| || |||||    
T  11421550 ttctgactaacactataagatcttgatcacaccagatcagtctgttacacc 11421600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 12173610 - 12173469
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||  |||| ||||| | ||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||| | || |||||||||||    
T  12173610 agaataacacctgagatttatcatagttcaccaaactcggctactttcagtccccacaccttgtgtaagattatccactatag-tatcatgctaacagaa 12173512  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagt 164  Q
    |||| |||||||||| | || ||||||||||||||||||||||    
T  12173511 acttatgactagcaccataaattcttgatcacaccagatcagt 12173469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 23110242 - 23110359
Alignment:
Q  47 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 146  Q
    |||||| ||| || ||||||||||||||||||||| ||||| ||||||||||||||||| |||  ||||||||||||||||||||||||||| |  ||||    
T  23110242 gttcacgaaaaccagctacttccagtccccacaccccgtgttagattatccactatagtattc-ggctaacagaaacttctgactagcactatatgttct 23110340  T
Q  147 tgatcacaccagatcagtc 165  Q
    |||||||||||||| ||||    
T  23110341 tgatcacaccagataagtc 23110359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 13218453 - 13218359
Alignment:
Q  111 tgctaacagaaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaat 205  Q
    ||||||||||||||| ||||||| |||| ||  | |||||||||||||| |||| || ||   || |||| ||||||||| ||||||||||||||    
T  13218453 tgctaacagaaacttttgactagaactataaggtattgatcacaccagaccagttcggaatcactatattatcaacctcaacaagcttatacaat 13218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 12415190 - 12415064
Alignment:
Q  83 cgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacac-ctgtattg 181  Q
    |||||||||||||||| |||||| | ||   || ||||||||||| | |||||||| |||   ||||||||||||||||||||||| |||| |||||||     
T  12415190 cgtgtgagattatccattatagtatcctct-tatcagaaacttcttaatagcactataataagttgatcacaccagatcagtccgttacactctgtatta 12415092  T
Q  182 tcaacctcagcaagcttatacaattctt 209  Q
    | ||||  |||| |||| ||| ||||||    
T  12415091 ttaaccatagcaggcttctacgattctt 12415064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 24794544 - 24794782
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24794544 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 24794643  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  24794644 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 24794743  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  24794744 aaagaaaggttggaattttctatctcaaaactattaagc 24794782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 28367651 - 28367889
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28367651 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 28367750  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28367751 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 28367850  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28367851 aaagaaaggttggaattttctatctcaaaactattaagc 28367889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 28375469 - 28375707
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28375469 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 28375568  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28375569 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 28375668  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28375669 aaagaaaggttggaattttctatctcaaaactattaagc 28375707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 28383291 - 28383529
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28383291 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 28383390  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28383391 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 28383490  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28383491 aaagaaaggttggaattttctatctcaaaactattaagc 28383529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 28351718 - 28351956
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28351718 agaataacacaggagagttatgctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 28351817  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  28351818 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacctctgtattatcaaccttagcaggcttatacaattctttgcacactagca 28351917  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28351918 aaagaaaggttggaattttctatctcaaaactattaagc 28351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 23 - 260
Target Start/End: Original strand, 38529176 - 38529413
Alignment:
Q  23 gaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaa 122  Q
    |||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38529176 gaataatacaggagagttatcatagttcaccaaacccggctacttccagtgcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaa 38529275  T
Q  123 cttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaa 222  Q
     ||||||||||||||| ||  ||||||||||||||||| |||| || |||| |||||| |||||||||| | |||| |||||||||||||||||||||||    
T  38529276 tttctgactagcactataagatcttgatcacaccagatgagtctgttacacttgtattatcaacctcagtaggcttctacaattctttgcacactagcaa 38529375  T
Q  223 aagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  38529376 aagaaaggttggaattttctatctcaaaacgattaagc 38529413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 4951783 - 4951546
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| |||||||||| ||||||||||||| || ||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  4951783 agaataacacatgagagttatcttggttcaccaaactcgactacttcaagtcctcacacctcgtgtgagattatccactatatttgtcttgctaacagaa 4951684  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    | ||||||||||||||||||  | ||| |||||||||||||||| || ||||||||||| ||||||||| ||  ||| ||||||||||| ||||||||||    
T  4951683 atttctgactagcactacaaggtattggtcacaccagatcagtctgttacacctgtattatcaacctcaacagccttctacaattctttacacactagca 4951584  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| || ||||||||||||| ||||||||||||    
T  4951583 aaagaaaggttgaaattttctatctc-aaactattaagc 4951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 5385874 - 5385690
Alignment:
Q  27 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttc 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| | |||||||||    
T  5385874 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatac-agctgatagaaacttc 5385776  T
Q  127 tgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    | || | ||||| ||  |||||||||||||||||||||  |||||  ||||||  |||||||||||| |||| |||||||||||||    
T  5385775 taaccaacactataaggtcttgatcacaccagatcagtatgtaaccactgtatcatcaacctcagcaggcttctacaattctttgc 5385690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 13328278 - 13328465
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 121  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||||    
T  13328278 aataacacaggagagttatcttggttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatacagttggt---agaa 13328374  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||| || | |||||  |  |||||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||    
T  13328375 acttctaaccaacactattaggtcttgatcacaccagatcagtccgtaacccttgtattatcaacctcagcaagcttctacaattctttgc 13328465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 23487232 - 23487041
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttc--cagtccccacacctcgtgtgagattatccactatagttttc--ttgctaac 117  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||  |||||||||||||||||||||||| |||  ||| |       
T  23487232 agaataacacaggagagttatcctggttcaccaatcccggttacttccacagtccccacatttcgtgtgagattatccactatagtattcagttggt--- 23487136  T
Q  118 agaaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||||| || | ||||| ||  |||||||||||||||||||||| ||||| | |||||| |||||||||||| |||| |||||||||||||    
T  23487135 agaaacttctaaccaacactataaggtcttgatcacaccagatcagtctgtaacccttgtattatcaacctcagcaggcttctacaattctttgc 23487041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 46305572 - 46305760
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||| | |  ||| |   ||    
T  46305572 agaataacacaggagagttatcttggttcatcaaacccggctacttccagtccccacacttcgt-tgagattatccactttagtatacagttggt---ag 46305667  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||| |||||  ||||||| |||||||||||| |||| |||||||||||||    
T  46305668 aaacttctaaccaacactataaggtcttgatcacaccagatcagtctgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 46305760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 17529877 - 17530046
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | || |||| ||||||||||||| ||||||||    
T  17529877 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcacta 17529974  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  17529975 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 17530046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 32878039 - 32877870
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  |||||||||||||||||||||| | || ||||| || |||||||||| || |||||    
T  32878039 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatag-tatcatgctatcataaacttctgaataacacta 32877942  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||||| |||||||||||||||||||| || |||| ||||||| |||||||||||| |||| ||| ||||||    
T  32877941 taatttgttgatcacaccagatcagtctgttacactctgtattatcaacctcagcaggcttctacgattctt 32877870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 54624824 - 54624655
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  |||||||||||||||||||||| | || ||||| ||||||||||||| ||||||||    
T  54624824 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatag-tatcctgctatcagaaacttctgaatagcacta 54624727  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||| |||||||||||| || |||| ||||||| |||||||||||| |||| ||| ||||||    
T  54624726 taatatgttgatcataccagatcagtctgttacactctgtattatcaacctcagcaggcttctacgattctt 54624655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 48978835 - 48978670
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | | |     ||||||||||||| ||||||||    
T  48978835 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatccat-----cagaaacttctgaatagcacta 48978742  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  48978741 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 48978670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 48988375 - 48988210
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | | |     ||||||||||||| ||||||||    
T  48988375 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatccat-----cagaaacttctgaatagcacta 48988282  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  48988281 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 48988210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 7783987 - 7784089
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||  | | ||||||||||||||| | ||||||||||| |||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  7783987 agaataacacaggagaactgttctggttcaccaaacctgactacttccagttcccacaccacatgtgagattatccactacagttgtcttgctaacagaa 7784086  T
Q  122 act 124  Q
    |||    
T  7784087 act 7784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 165
Target Start/End: Complemental strand, 19388936 - 19388809
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgc--taacagaaacttctgactagcac 136  Q
    ||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||| |||||||| |||  ||  || || |||||||||| ||||||    
T  19388936 ttatcctggttcaccaaaatcggctacttcaagtccccacacttcgtgtgagattatcgactatagtattc-agctatatcataaacttctgaatagcac 19388838  T
Q  137 tacaatttcttgatcacaccagatcagtc 165  Q
    || || || ||||| |||||| |||||||    
T  19388837 tataagttgttgatgacaccatatcagtc 19388809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 7784110 - 7784194
Alignment:
Q  127 tgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattgtcaacctcagcaagcttatacaattcttt 210  Q
    |||||| ||||| ||  |||||||||||||||||||||| || ||| |||||||| |||||||||||| |||| |||||||||||    
T  7784110 tgactaacactataaggtcttgatcacaccagatcagtctgttacaccctgtattatcaacctcagcaggcttctacaattcttt 7784194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 4361514 - 4361699
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||| ||||| |||| |||||||||||||  ||| |||| || || | ||| |||||||||||||||||||||||| ||||| | || |||||||| ||    
T  4361514 agaatgacacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatag-tatcctgctaacaaaa 4361612  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacc-tgtattgtcaacctcagcaagcttatacaattcttt 210  Q
    |||||| || |||| |  ||    ||||||||| ||||||| || || ||||| |||||| ||||||||||||  ||| | |||||||||    
T  4361613 acttcttaccagcattgaaa---attgatcacaacagatcattctgttacaccttgtattatcaacctcagcagacttcttcaattcttt 4361699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 24285537 - 24285493
Alignment:
Q  61 gctacttccagtccccacacctcgtgtgagattatccactatagt 105  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||    
T  24285537 gctacttccactccctacacttcgtgtgagattatccactatagt 24285493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 215; Significance: 1e-118; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 94429 - 94667
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94429 agaataacacaggagagttatcctggttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 94528  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  94529 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 94628  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  94629 aaagaaaggttggaattttctatctcaaaactattaagc 94667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 103870 - 104108
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  103870 agaataacacaggagagttatcctggttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 103969  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  103970 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 104069  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  104070 aaagaaaggttggaattttctatctcaaaactattaagc 104108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 82336 - 82272
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  82336 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 82272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 211; Significance: 1e-116; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 30821 - 31059
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30821 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 30920  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  30921 acttctgactaacactacaatattttgatcacaccagatcagtcagtaacacctgtattatcaacctcagcaggcttatacaattctttgcacactagca 31020  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  31021 aaagaaaggttggaattttctatctcaaaactattaagc 31059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 10230 - 9997
Alignment:
Q  23 gaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaa 122  Q
    |||||||||| |||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  10230 gaataacacatgagagttatcttggttcaccaaacacggcta-ttccagtccccacaccccgtgtgagattatccactatagttgtcttgctaacagaaa 10132  T
Q  123 cttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagcaa 222  Q
    |||||||||||||||| ||  ||| |||||||||||||||||| || ||||||||||| |||||||||  | |||| ||||||||||||  |||||| ||    
T  10131 cttctgactagcactataaggtctagatcacaccagatcagtctgttacacctgtattatcaacctcaataggcttctacaattctttg--cactagaaa 10034  T
Q  223 aagaaaggatggaattttctatctcaaaactattaagc 260  Q
    || ||| | | |||||||||||||| ||||||||||||    
T  10033 aataaatgttagaattttctatctc-aaactattaagc 9997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 408518 - 408280
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  408518 agaataacacaggagagttatcctggttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 408419  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||  || |||||||||||||||||||||||||||    
T  408418 acttctgactagcactacaatatcttgatcacaccagattagtccgtaacacctgtattatcaacctcttcaggcttatacaattctttgcacactagca 408319  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  408318 aaagaaaggttggaattttctatctcaaaactattaagc 408280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 7593196 - 7592958
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7593196 agaataacacaagagagttatcctggttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttcttgctaacagaa 7593097  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  7593096 acttctgactagcactacaatatcttgatcacaccagatcagtccgtaacacctgtattatcaacctcatcaggcttatacaattctttgcacactagca 7592997  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  7592996 aaagaaaggttggaattttctatctcaaaactattaagc 7592958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 15174730 - 15174492
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15174730 agaataacacaggagatttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacaaaa 15174631  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  15174630 acttctgactagcactacaagatcttgatcacaccagatcagtccgttacacctgtattatcaacctcagcaggcttatataattctttgcacactagca 15174531  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  15174530 aaagaaaggttggaattttctatctcaaaactattaagc 15174492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 14634776 - 14634965
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  |||   ||||    
T  14634776 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgc-agctggtagaa 14634874  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  14634875 acttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 14634965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 14644476 - 14644665
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  14644476 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 14644572  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  14644573 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 14644665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 33292175 - 33292364
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  33292175 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 33292271  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  33292272 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 33292364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 11634337 - 11634554
Alignment:
Q  31 caggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgac 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |  ||||||||||| ||    
T  11634337 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agttggcagaaacttctaac 11634435  T
Q  131 tagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaaagaaag 229  Q
     | ||||| ||  ||||||||||||| |||||||  |||||  ||||||| |||||||||||| ||||  ||||||||||||  ||||||||||||||||    
T  11634436 caacactataacgtcttgatcacacccgatcagtttgtaacctctgtattatcaacctcagcaggcttcttacaattctttg--cactagcaaaagaaag 11634533  T
Q  230 gatggaattttctatctcaaa 250  Q
    | |||||||||||||||||||    
T  11634534 gttggaattttctatctcaaa 11634554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 15947371 - 15947560
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  15947371 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagtatgcagttggt---ag 15947467  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  15947468 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 15947560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 32818185 - 32817997
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||  ||| |   ||    
T  32818185 agaataacacaggagagttatcctggttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagttggt---ag 32818089  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttg 211  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||| ||||| |||||||| |||||||| ||| |||| ||||||| ||||    
T  32818088 aaacttctaaccaacactataaggtcttgatcacaccagatcagtctgtaacccctgtattatcaacctccgcaggcttctacaattttttg 32817997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 9737135 - 9736946
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||  | |   ||||    
T  9737135 agaataacacaggagagttatcctggttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagtattc-agtttgtagaa 9737037  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||| || | ||||| ||   ||||||||||||||||||||| ||| | |||||||| |||||||||||| |||| |||||||||||||    
T  9737036 acttctaaccaacactataaggccttgatcacaccagatcagtctgtagcccctgtattatcaacctcagcaggcttctacaattctttgc 9736946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 210
Target Start/End: Original strand, 19352589 - 19352775
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||| ||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||||||||    
T  19352589 aataatacaggagagttatactggttcaccaaattcggctacttccagtcctcacacttcgtgtgagattatccactatag-tctcctgctaacagaaac 19352687  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattgtcaacctcagcaagcttatacaattcttt 210  Q
    |||||||| | |||| || ||| |||||||||||||||  ||||| ||| |||||||| | ||||||| || |||| |||| ||||||    
T  19352688 ttctgacttgtactataaattcctgatcacaccagatctttccgttacaccctgtattatgaacctcatcaggcttctacacttcttt 19352775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 13874572 - 13874423
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 121  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |   ||||    
T  13874572 aataacacaggagagttatcctggttcacccaatccg-ctacttccagtccccacacttcgtgtgagattatccactatagttttcagttggt---agaa 13874477  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 175  Q
    |||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  13874476 acttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 13874423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 48710005 - 48710121
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagt-ccccacacctcgtgtgagattatccactatagttttcttgctaacaga 120  Q
    ||||||||||||||||| ||| |||||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||| |||  ||||  |||    
T  48710005 agaataacacaggagagatattctggttcaccaaactcggatacttccagtcccccacacttcgtgtgagattatccactatagtattc-agctagtaga 48710103  T
Q  121 aacttctgactagcacta 138  Q
    ||||||| ||||||||||    
T  48710104 aacttctaactagcacta 48710121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 4306573 - 4306739
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    ||||||| |||||||||| || |||||||||||| ||||||| ||| |||||||| || ||||||| | ||   ||| ||||||||| ||| |||||||     
T  4306573 ttatcctagttcaccaaagccagctacttccagttcccacacttcgagtgagattttctactatag-tatccaactatcagaaacttatgaatagcact- 4306670  T
Q  139 caatttcttgatcacaccagatcagtccg-taacac-ctgtattgtcaacctcagcaagcttatacaatt 206  Q
     |  || |||||||||||||||||||||| | |||| ||||||| ||||||||||||  ||| |||||||    
T  4306671 -atgttgttgatcacaccagatcagtccgattacactctgtattatcaacctcagcagacttctacaatt 4306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 48711401 - 48711469
Alignment:
Q  144 tcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||||||||| |||||| || ||||| |||||| ||||||||| || |||| || ||||||||||    
T  48711401 tcttgatcacaccatatcagttcggaacacatgtattatcaacctcaacaggcttctataattctttgc 48711469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 607282 - 607218
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  607282 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 607218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 616377 - 616313
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  616377 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 616313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 3723 - 3485
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3723 agaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 3624  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3623 acttctgactagcactacaatttcttgatcacaccagatcagtctgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 3524  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  3523 aaagaaaggttggaattttctatctcaaaactattaagc 3485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 7789076 - 7789314
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7789076 agaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 7789175  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  7789176 acttctgactagcactacaatttcttgatcacaccagatcagtctgtaacctctgtattatcaacctcagcaggcttatacaattctttgcacactagca 7789275  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  7789276 aaagaaaggttggaattttctatctcaaaactattaagc 7789314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 20714259 - 20714021
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  20714259 agaataacacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtcttgctaacagaa 20714160  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||| ||  |||||||||||||||||||||| || ||||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  20714159 acttctgactagcactataagatcttgatcacaccagatcagtctgttacacctgtattatcaacctcagcaggcttctacaattctttgcacactagca 20714060  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  20714059 aaagaaaggttggaattttctatctcaaaactattaagc 20714021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 18143427 - 18143662
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||  ||| |||       
T  18143427 agaataacacaggagagttatcttggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagcattcagttggtaa--- 18143523  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacacta 218  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||| ||||| | |||||| |||||||||| | ||||  ||||||||||||  |||||    
T  18143524 aaacttctaaccaacactataaggtcttgatcacaccagatcagtctgtaacccttgtattatcaacctcagtaggcttcttacaattctttg--cacta 18143621  T
Q  219 gcaaaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  18143622 gcaaaagaaaggttggaattttctatctc-aaactattaagc 18143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 31575411 - 31575595
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  ||||  ||||||    
T  31575411 aataacacaagagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agctagtagaaac 31575509  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctt 209  Q
    |||| |||||||||| ||  |||||||||||||| ||||||||  ||| |||||||| ||||||||||||||||| ||||||||||    
T  31575510 ttctaactagcactataaggtcttgatcacaccaaatcagtccagaacccctgtattatcaacctcagcaagcttctacaattctt 31575595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 25051063 - 25051296
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 121  Q
    ||||||||| |||||||||| ||||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||| |||  ||| ||   |||    
T  25051063 aataacacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggta---gaa 25051159  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagc 220  Q
    |||||| || | ||||| ||| |||||||||||||||||||||| |||||  ||||||| |||||||||||| ||||  ||||||||||||  |||||||    
T  25051160 acttctaaccaacactataatgtcttgatcacaccagatcagtctgtaacctctgtattatcaacctcagcaggcttcttacaattctttg--cactagc 25051257  T
Q  221 aaaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  25051258 aaaagaaaggttggaattttctatctc-aaactattaagc 25051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 42712176 - 42712365
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  42712176 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 42712272  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  42712273 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 42712365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 18883163 - 18883384
Alignment:
Q  27 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaact 124  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  ||| |   ||||| |    
T  18883163 aacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggt---agaaaat 18883259  T
Q  125 tctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaa 223  Q
    ||| || | ||||| ||  ||||||||||||||||||||| |||| |  ||||||| |||||||||||| ||||  ||||||||||||  ||||||||||    
T  18883260 tctaaccaacactataaagtcttgatcacaccagatcagttcgtaccctctgtattatcaacctcagcaggcttcttacaattctttg--cactagcaaa 18883357  T
Q  224 agaaaggatggaattttctatctcaaa 250  Q
    ||||||| |||||||||||||||||||    
T  18883358 agaaaggttggaattttctatctcaaa 18883384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 25037026 - 25037259
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 121  Q
    ||||||||| |||||||||| ||||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||| |||  ||| ||   |||    
T  25037026 aataacacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggta---gaa 25037122  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagc 220  Q
    |||||| || | ||||| ||  |||||||||||||||||||||| |||||  ||||||| |||||||||||| ||||  ||||||||||||  |||||||    
T  25037123 acttctaaccaacactataaagtcttgatcacaccagatcagtctgtaacctctgtattatcaacctcagcaggcttcttacaattctttg--cactagc 25037220  T
Q  221 aaaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  25037221 aaaagaaaggttggaattttctatctc-aaactattaagc 25037259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 18233107 - 18232890
Alignment:
Q  31 caggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgac 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |  ||||||||||| |     
T  18233107 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agttggcagaaacttctaat 18233009  T
Q  131 tagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaaagaaag 229  Q
     | ||||||||  ||||||||||||| |||||||  |||||  ||||||| |||||||||||| | ||  ||||||||||||  ||||||||||||||||    
T  18233008 caacactacaacgtcttgatcacacccgatcagtttgtaacctctgtattatcaacctcagcaggattcttacaattctttg--cactagcaaaagaaag 18232911  T
Q  230 gatggaattttctatctcaaa 250  Q
    | |||||||||||||||||||    
T  18232910 gttggaattttctatctcaaa 18232890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 18242558 - 18242341
Alignment:
Q  31 caggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgac 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |  ||||||||||| |     
T  18242558 caggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agttggcagaaacttctaat 18242460  T
Q  131 tagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaaagaaag 229  Q
     | ||||||||  ||||||||||||| |||||||  |||||  ||||||| |||||||||||| | ||  ||||||||||||  ||||||||||||||||    
T  18242459 caacactacaacgtcttgatcacacccgatcagtttgtaacctctgtattatcaacctcagcaggattcttacaattctttg--cactagcaaaagaaag 18242362  T
Q  230 gatggaattttctatctcaaa 250  Q
    | |||||||||||||||||||    
T  18242361 gttggaattttctatctcaaa 18242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 20030368 - 20030179
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   |     
T  20030368 agaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggt---at 20030272  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||||||  |||||||| |||||||||||| |||| |||||||||||||    
T  20030271 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaatccctgtattatcaacctcagcaggcttctacaattctttgc 20030179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 20045007 - 20044818
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| | |  ||| |   ||    
T  20045007 agaataacacatgagagttatcctggttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagtatacagttggt---ag 20044911  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||    
T  20044910 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaacccctgtattatcaacctcagcaggcttctacaattctttgc 20044818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 12925543 - 12925355
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  12925543 agaataacacaggagagttatcctggttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 12925447  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttg 211  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| ||||||||||||    
T  12925446 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttg 12925355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 18252009 - 18251792
Alignment:
Q  31 caggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgac 130  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |  ||||||||||| ||    
T  18252009 caggagagttatcctgattcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agttggcagaaacttctaac 18251911  T
Q  131 tagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaaagaaag 229  Q
     | ||||| ||  ||||||||||||| |||||||  |||||  ||||||| |||||||||||| | ||  ||||||||||||  ||||||||||||||||    
T  18251910 caacactataacgtcttgatcacacccgatcagtttgtaacctctgtattatcaacctcagcaggattcttacaattctttg--cactagcaaaagaaag 18251813  T
Q  230 gatggaattttctatctcaaa 250  Q
    | |||||||||||||||||||    
T  18251812 gttggaattttctatctcaaa 18251792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 12767822 - 12767631
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttc--cagtccccacacctcgtgtgagattatccactatagttttc--ttgctaac 117  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||  |||||||||||||||||||||||| |||  ||| |       
T  12767822 agaataacacaggagagttatcctggttcaccaatcccggttacttccacagtccccacatttcgtgtgagattatccactatagtattcagttggt--- 12767726  T
Q  118 agaaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||||| || | ||||| ||  |||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||    
T  12767725 agaaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaacccctgtattatcaacctcagcaggcttctacaattctttgc 12767631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 22 - 259
Target Start/End: Original strand, 4843720 - 4843956
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  ||| |   ||    
T  4843720 agaataacaaaggagagttatcctggttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggt---ag 4843816  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctg--tattgtcaacctcagcaagctt-atacaattctttgcacac 216  Q
    ||| |||| || |  |||| ||  |||||||||||||||||||||| ||||| | ||  |||| ||||||||| || ||||  ||||||||||||  |||    
T  4843817 aaatttctaaccaagactataaggtcttgatcacaccagatcagtctgtaacccttgtatattatcaacctcatcaggcttcttacaattctttg--cac 4843914  T
Q  217 tagcaaaagaaaggatggaattttctatctcaaaactattaag 259  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  4843915 tagcaaaagaaaggttggaattttctatctc-aaactattaag 4843956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 33592134 - 33592284
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||  | | ||||||||    
T  33592134 aataacacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttc-agttgacagaaac 33592232  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 175  Q
    ||||||| | ||||| ||  |||||||||||| ||||||||||  |||||||    
T  33592233 ttctgaccaacactataaggtcttgatcacactagatcagtccagaacacct 33592284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 33601773 - 33601923
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||  | | ||||||||    
T  33601773 aataacacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttc-agttgacagaaac 33601871  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 175  Q
    ||||||| | ||||| ||  |||||||||||| ||||||||||  |||||||    
T  33601872 ttctgaccaacactataaggtcttgatcacactagatcagtccagaacacct 33601923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 12915648 - 12915500
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  12915648 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 12915552  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaac 171  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||    
T  12915551 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaac 12915500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 24096077 - 24096262
Alignment:
Q  26 taacacaggagagttatcctggttcaccaaacccggctacttccagtcccc-acacctcgtgtgagattatccactatagttttcttgctaacagaaact 124  Q
    |||||||||||| |||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  24096077 taacacaggagatttattctggttcaccaaactcgactacttccagtcccccacacctcgtgtgagattatccactatagtat-cttgctaacataaact 24096175  T
Q  125 tctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttg 211  Q
    | ||||||||||||||| |||||||| |||||| |||||||| |    | |||||| ||||||||| ||| ||| | ||||||||||    
T  24096176 tttgactagcactacaagttcttgattacaccatatcagtccattttccttgtattatcaacctcaacaaacttcttcaattctttg 24096262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 15834137 - 15833950
Alignment:
Q  25 ataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaact 124  Q
    |||||||| |||| ||||| |||||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||| | || ||||||| ||||||    
T  15834137 ataacacaagagatttatcttggttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatag-tatcatgctaactgaaact 15834039  T
Q  125 tctgactagcactacaatttcttgatcacaccagatcagtccgtaac-acctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||||||||| || ||||||| || ||||||| ||| ||| ||  |||||||| ||||| |||| | | || |||||||||||||    
T  15834038 tctgactagcactataagttcttgaccataccagataagttcgttactccctgtattatcaacatcagtaggtttctacaattctttgc 15833950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 24634145 - 24634009
Alignment:
Q  34 gagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactag 133  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||  ||||  |||||||||| |||||    
T  24634145 gagagttatcctggttcctcaaacccgactacttccagtccccacacttcgtgtgatattatccactatagtattc-agctagtagaaacttctaactag 24634047  T
Q  134 cactacaatttcttgatcacaccagatcagtccgtaac 171  Q
    ||||| ||  ||||||||||||||||||||||| ||||    
T  24634046 cactataaggtcttgatcacaccagatcagtccataac 24634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 20714484 - 20714417
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtga 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20714484 agaataacacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtga 20714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 42896174 - 42896299
Alignment:
Q  49 tcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttcttg 148  Q
    ||||| || |||||||||||||||| |||||| ||||||||||||||||||||||| ||||  | | | |||||||||| || | ||||| ||  |||||    
T  42896174 tcacccaatccggctacttccagtctccacacttcgtgtgagattatccactatagatttc-agttgatagaaacttctaaccaacactataaggtcttg 42896272  T
Q  149 atcacaccagatcagtccgtaacacct 175  Q
    ||||||||||||||||||  |||||||    
T  42896273 atcacaccagatcagtccagaacacct 42896299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 26194048 - 26194106
Alignment:
Q  27 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgt 85  Q
    |||||| |||||||||||||||||| |||||||  ||||||| ||||||||||| ||||    
T  26194048 aacacatgagagttatcctggttcatcaaacccaactacttctagtccccacacttcgt 26194106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 31710464 - 31710702
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31710464 agaataacacatgagagttatccttgttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 31710563  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||  ||| ||||||||||||||||||||||    
T  31710564 acttctgactagcactataagatcttgatcacaccagatcagtccgttacacctgtattatcaacctcagcagacttctacaattctttgcacactagca 31710663  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  31710664 aaagaaaggttggaattttctatctcaaaactagtaagc 31710702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 22 - 258
Target Start/End: Original strand, 24022740 - 24022976
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24022740 agaataacattggagagttatcctcgttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 24022839  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||| ||||||||| || |||| ||||||||||||||||||||||    
T  24022840 acttctgactagcactataagatcttgatcacaccagatcagtccgttacacctgtattatcaacctcaacaggcttctacaattctttgcacactagca 24022939  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaa 258  Q
    |||| |||| || ||||||||||||||||||||||||    
T  24022940 aaaggaaggttgaaattttctatctcaaaactattaa 24022976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 14273394 - 14273157
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  14273394 agaataacacacgagaattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 14273295  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcacactagca 221  Q
    ||||||||||||||||| ||  |||| ||||||||| ||||||| || |||||| |||| |||||||||||| |||| ||||||||||||||||||||||    
T  14273294 acttctgactagcactataagatcttaatcacaccatatcagtctgttacacctatattatcaacctcagcaggcttctacaattctttgcacactagca 14273195  T
Q  222 aaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||| | |||||||||||||||  ||||||||||||    
T  14273194 aaagaaatgttggaattttctatct-taaactattaagc 14273157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 35877705 - 35877516
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  35877705 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 35877609  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||| ||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  35877608 aaacttctaaccaacactataaggtcttgatcacaccagatcagttcgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 35877516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 35885194 - 35885005
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  35885194 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 35885098  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||| ||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  35885097 aaacttctaaccaacactataaggtcttgatcacaccagatcagttcgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 35885005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 36724907 - 36724718
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  36724907 agaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 36724811  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||| ||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  36724810 aaacttctaaccaacactataaggtcttgatcacaccagatcagttcgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 36724718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 1800662 - 1800493
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | || |||| ||||||||||||| ||||||||    
T  1800662 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcacta 1800565  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  1800564 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 1800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 3397108 - 3396923
Alignment:
Q  26 taacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaac 123  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| | |  ||| |   ||||||    
T  3397108 taacacaggagagttatcatggttcaccaaacccagctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggt---agaaac 3397012  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||| || | ||||| ||  ||||||||||||||||||||||||||||   |||||| ||||||||||||  ||| || ||||||||||    
T  3397011 ttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccattgtattatcaacctcagcagacttctaaaattctttgc 3396923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 22632571 - 22632402
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | || |||| |||||||||||||||| |||||    
T  22632571 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgactaacacta 22632474  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  22632473 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 22632402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 1791164 - 1790999
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  ||||||||||||||||||||||| | | |     ||||||||||||| ||||||||    
T  1791164 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatagtatccat-----cagaaacttctgaatagcacta 1791071  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  1791070 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 1790999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 18578875 - 18578700
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| |||| ||||||  ||||| |||||||| |||||| |||||||||||||| |||||||||||| |||  ||  | || | |||||||||    
T  18578875 agaataacacatgagatttatccatgttcatcaaacccgactactttcagtccccacaccttgtgtgagattattcacagta-atatcctcctaacagaa 18578777  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattgtcaacctcagcaagct 197  Q
    |||| ||||||| |||| || |||||||| |||||||| || || || ||| |||||||| ||||||||| ||||||    
T  18578776 acttttgactaggactataagttcttgataacaccagaccaatctgttacaccctgtattatcaacctcatcaagct 18578700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 16446739 - 16446670
Alignment:
Q  36 gagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagt 105  Q
    |||||||||||| |||| ||| ||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  16446739 gagttatcctggatcactaaatccgactactttcagtccccacatttcgtgtgagattatccactatagt 16446670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 29911350 - 29911278
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagatta 94  Q
    ||||||||||| |||| ||||| ||||| |||||| || ||| |||||||||||| |||||||||||||||||    
T  29911350 agaataacacatgagatttatcatggttaaccaaatccagctgcttccagtcccctcacctcgtgtgagatta 29911278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 5378422 - 5378613
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5378422 agaataacacaggagaattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaa 5378521  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaaca-cctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||| |||||||||| ||  |||||||||||||||||||||| || ||| ||| |||| | ||||||||||  ||| |||||||||||||    
T  5378522 acttctaactagcactataaggtcttgatcacaccagatcagtctgttacaccctatattataaacctcagcagacttctacaattctttgc 5378613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 15809976 - 15810217
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccag--------tccccacacctcgtgtgagattatccactatagttttcttgcta 115  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||        |||||||||||||||||||||||||||||||| || ||||| ||    
T  15809976 aataacacaagagaattatcctggttcaccaaatccgactacttccagagttcgagtccccacacctcgtgtgagattatccactataattatcttggta 15810075  T
Q  116 acagaaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgcaca 215  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||||||||| ||||||||||| ||||| || ||| |||| ||||||||||||   |    
T  15810076 acagaaacttctgagtagcactataaggtcttgatcacaccagatcagtccgttacacctgtattatcaacttcggcatgcttctacaattctttg--aa 15810173  T
Q  216 ctagcaaaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    | ||||||||||||| |||||||||||||||| ||||||||||||    
T  15810174 ccagcaaaagaaaggttggaattttctatctc-aaactattaagc 15810217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 14272016 - 14272205
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  14272016 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 14272112  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  14272113 aaacttctaacaaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 14272205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 40999034 - 40999224
Alignment:
Q  23 gaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaa 122  Q
    ||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  40999034 gaataacacataagagttatcctggttcaccaaacccgacaacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacggaaa 40999133  T
Q  123 cttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacc-tgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    ||| |||||||||||| ||  | |||||||||||||||||||  || ||||| |||||| ||||||||| ||  ||| |||||||||||||    
T  40999134 cttatgactagcactataaggttttgatcacaccagatcagtttgttacaccatgtattatcaacctcaacagacttctacaattctttgc 40999224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 14281888 - 14282071
Alignment:
Q  28 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaactt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||||||||    
T  14281888 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---agaaactt 14281984  T
Q  126 ctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    || || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  14281985 ctaacaaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 14282071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 26906244 - 26906431
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||  | ||||| ||||||||    
T  26906244 agaataacacacgagatttatcctggttcaccaaaccaggctacttctagtccccatacctcgtgtgagattatccattata-atatcttgttaacagaa 26906342  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
    ||||||||||||||||| || |||||| |||||||||||||||| || |||| ||||||| ||||||||||||  ||| ||||||||||    
T  26906343 acttctgactagcactataagttcttggtcacaccagatcagtctgttacactctgtattatcaacctcagcagacttttacaattctt 26906431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 21633769 - 21633594
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 121  Q
    ||||||||||| || |  ||| |||||||||||||||||||||| || ||||||||||| |  ||||||||||||||||||||| ||||  |||  ||||    
T  21633769 agaataacacaagataaatattctggttcaccaaacccggctacgtctagtccccacactttttgtgagattatccactatagtattcta-ctagtagaa 21633671  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt 198  Q
    |||||||||||||| || ||  ||||| |||||||||||||||||| |||| ||||||| |||||||||||| ||||    
T  21633670 acttctgactagcattataaggtcttggtcacaccagatcagtccggaacaactgtattatcaacctcagcaggctt 21633594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 21919431 - 21919581
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaa 121  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |   ||||    
T  21919431 aataacacaggagagttatcctgattcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttggt---agaa 21919527  T
Q  122 acttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 175  Q
    |||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  21919528 acttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 21919581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 212
Target Start/End: Original strand, 3470949 - 3471124
Alignment:
Q  36 gagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaacttctgactag 133  Q
    |||||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||||||| |||| | |  ||| |   |||||||||| || |     
T  3470949 gagttatcctggttcaccaaacccggttacttccagcccccacacttcatgtgagattatccactgtagtatacaattggt---agaaacttctaaccaa 3471045  T
Q  134 cactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    || || ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  3471046 cattataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 3471124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 30676976 - 30676788
Alignment:
Q  25 ataacacaggagagttatcctggttcac-caaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||||  ||| ||||| |||||||| |||| | | |||||| |||||||||||| ||||||||||||||||| || | | |||  ||||  ||||||    
T  30676976 ataacacacaagatttatcatggttcacacaaagcagactactttcagtccccacacttcgtgtgagattatccattacaatattca-gctataagaaac 30676878  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    || ||| |||||||| |  ||||||||||||| ||||||||| || |||| ||||||| |||| |||| ||  |||||| ||||||||||    
T  30676877 ttatgaatagcactatatgttcttgatcacacaagatcagtctgttacactctgtattatcaatctcaacatacttatataattctttgc 30676788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 28310018 - 28310155
Alignment:
Q  27 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttc 126  Q
    |||||| |||| |||||||| |||||| |||| |||||||||| ||  ||||||  ||||||   |||||||||||||| | || |||| || |||||||    
T  28310018 aacacaagagatttatcctgattcacctaacc-ggctacttccggtttccacactacgtgtgg--ttatccactatagtatcct-gctatcaaaaacttc 28310113  T
Q  127 tgactagcactacaatttcttgatcacaccagatcagtccgt 168  Q
     || || ||||| || || |||||||||||||||||||||||    
T  28310114 cgaataacactataagttgttgatcacaccagatcagtccgt 28310155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 257142 - 256921
Alignment:
Q  27 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacagaaact 124  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| |||  ||| ||   ||||||    
T  257142 aacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagtattcagttggta---gaaact 257046  T
Q  125 tctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagctt-atacaattctttgcacactagcaaa 223  Q
    ||| || | ||||| ||  ||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||  ||||||||||||  ||||||||||    
T  257045 tctaaccaacactataaagtcttgatcacaccagatcagttcgtaacctctgtattatcaacctcagcaagcttcttacaattctttg--cactagcaaa 256948  T
Q  224 agaaaggatggaattttctatctcaaa 250  Q
    ||||||| |||||||||||||||||||    
T  256947 agaaaggttggaattttctatctcaaa 256921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 2298 - 2109
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   |     
T  2298 agaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggt---at 2202  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||||||  |||||||| |||||||||||| |||| |||||||||||||    
T  2201 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaatccctgtattatcaacctcagcaggcttctacaattctttgc 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 124236 - 124047
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||||||||||||||||||||| |||| || | |||||||||||||||||| |||||||||||||||||||||||| | |  ||| |   ||    
T  124236 agaataacacaggagagttatcctggttcatcaaatcctgttacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggt---ag 124140  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    |||||||| || | ||||| ||  ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  124139 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 124047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 100152 - 99994
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||  ||||||||||||||  |||||||||||||||| |||||| | || |||| ||||||||||||| ||||||||    
T  100152 ttatcctggttcgcctaacc-ggctatgtccagtccccacactacgtgtgagattatccattatagtatcct-gctatcagaaacttctgaatagcacta 100055  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagctt 198  Q
     ||| | |||||||||||| ||||||| || |||| ||||||| ||||||||| |||||||    
T  100054 taatatgttgatcacaccaaatcagtctgttacactctgtattatcaacctcaacaagctt 99994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 143237 - 143169
Alignment:
Q  144 tcttgatcacaccagatcagtccgtaacacctgtattgtcaacctcagcaagcttatacaattctttgc 212  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| |||||||||||||    
T  143237 tcttgatcacaccagatcagtccgtaaccactgtattatcaacctcagcaggcttctacaattctttgc 143169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 14830 - 14999
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| |||||| ||||||||||||||  |||||||||||||||||||||| | || ||||| ||||||||||||| ||||||||    
T  14830 ttatcctggttcgcctaacc-ggctacgtccagtccccacactacgtgtgagattatccactatag-tatcctgctatcagaaacttctgaatagcacta 14927  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | |||||||||||||||||||| || |||| ||||||| |||||||||||| |||| ||| ||||||    
T  14928 taatatgttgatcacaccagatcagtctgttacactctgtattatcaacctcagcaggcttctacgattctt 14999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 24762 - 24593
Alignment:
Q  39 ttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcacta 138  Q
    |||||||||||| || |||| | |||| ||||||||||||||  ||||||||||||||||||||||| | || |||| ||||||||||||| ||||||||    
T  24762 ttatcctggttcgcctaaccag-ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcacta 24665  T
Q  139 caatttcttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagcttatacaattctt 209  Q
     ||| | ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||| ||| ||||||    
T  24664 taatatgttgatcacaccagatcagtccgttacactctgtattatcaacctcagcaggcttctacgattctt 24593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 12548 - 12698
Alignment:
Q  24 aataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaac 123  Q
    ||||||| |||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||||| | | |   ||||||    
T  12548 aataacataggagagttatcctggttcacccaatccggctacttccagtccctacacttcgtgtgagattatccactatagtttt-tagttggtagaaac 12646  T
Q  124 ttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 175  Q
    |||| || | ||||| ||  ||||||||||||||||| |||||  |||||||    
T  12647 ttctaaccaacactataaggtcttgatcacaccagattagtccagaacacct 12698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 2259 - 2411
Alignment:
Q  22 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc--ttgctaacag 119  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || ||||||||||||||||||||| | |  ||| |   ||    
T  2259 agaataacacaggagagttatcctggttcacccaatccggctacttctagtccccacacttcttgtgagattatccactatagtatacagttggt---ag 2355  T
Q  120 aaacttctgactagcactacaatttcttgatcacaccagatcagtccgtaacacct 175  Q
    |||||||| || | ||||| ||  |||||||||||||||||||||||  |||||||    
T  2356 aaacttctaaccaacactataaggtcttgatcacaccagatcagtccagaacacct 2411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 26309 - 26357
Alignment:
Q  212 cacactagcaaaagaaaggatggaattttctatctcaaaactattaagc 260  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26309 cacactagcaaaagaaaggttggaattttctatctcaaaactattaagc 26357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 212
Target Start/End: Original strand, 27078 - 27246
Alignment:
Q  49 tcaccaaacccggctacttccagtccccacacctcgtgtgagatt----atccactatagttttcttgctaacagaaacttctgactagcactacaattt 144  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||    ||||||||||| | ||   ||| ||||||||||| | || ||||| |  ||    
T  27078 tcaccaaagtcggctacttccagtccccatacttcgtgtgagattatccatccactatag-tatccaactatcagaaacttcttaataacactatatgtt 27176  T
Q  145 cttgatcacaccagatcagtccgtaacac-ctgtattgtcaacctcagcaagctta-tacaattctttgc 212  Q
    ||||||||||| |||||| | ||| |||| ||||||| |||||||||||| ||||| |||||||||||||    
T  27177 cttgatcacactagatcaattcgttacactctgtattatcaacctcagcaggcttattacaattctttgc 27246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 49565 - 49501
Alignment:
Q  37 agttatcctggttcaccaaac-ccggctacttccagtccccacacctcgtgtgagattatccacta 101  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||| |  ||||||||||||||||||    
T  49565 agttatcgtggttcgccaaacgccggctacttccactccccaca-caagtgtgagattatccacta 49501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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