View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5825_low_8 (Length: 379)

Name: NF5825_low_8
Description: NF5825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5825_low_8
NF5825_low_8
[»] chr6 (20 HSPs)
chr6 (18-237)||(34883411-34883636)
chr6 (258-365)||(31110759-31110864)
chr6 (263-365)||(17598554-17598656)
chr6 (285-365)||(11427640-11427720)
chr6 (262-365)||(31976247-31976350)
chr6 (254-365)||(23128125-23128236)
chr6 (260-365)||(30341358-30341463)
chr6 (253-365)||(15832567-15832679)
chr6 (261-365)||(15990040-15990144)
chr6 (285-365)||(32869700-32869780)
chr6 (263-365)||(4231548-4231650)
chr6 (263-365)||(15508022-15508124)
chr6 (263-365)||(29857827-29857929)
chr6 (260-365)||(6209463-6209568)
chr6 (268-365)||(22880656-22880753)
chr6 (263-331)||(31109432-31109500)
chr6 (259-365)||(12732478-12732584)
chr6 (262-328)||(22422053-22422119)
chr6 (268-365)||(28536486-28536581)
chr6 (263-365)||(31953028-31953130)
[»] chr3 (32 HSPs)
chr3 (257-365)||(11347920-11348028)
chr3 (263-365)||(26141530-26141632)
chr3 (263-365)||(47531865-47531967)
chr3 (261-365)||(27714889-27714993)
chr3 (261-365)||(41189762-41189866)
chr3 (259-365)||(49607410-49607516)
chr3 (262-365)||(17470404-17470507)
chr3 (263-365)||(51419358-51419460)
chr3 (263-365)||(53982011-53982113)
chr3 (285-365)||(26754717-26754797)
chr3 (261-365)||(54868893-54868997)
chr3 (262-365)||(8956761-8956864)
chr3 (286-365)||(31456712-31456791)
chr3 (263-365)||(33644200-33644302)
chr3 (267-365)||(52629304-52629402)
chr3 (261-365)||(11907369-11907473)
chr3 (317-365)||(25407145-25407193)
chr3 (262-365)||(24699952-24700055)
chr3 (262-365)||(35536625-35536728)
chr3 (261-331)||(11095385-11095455)
chr3 (263-365)||(14623837-14623939)
chr3 (263-365)||(20764913-20765015)
chr3 (268-365)||(13898053-13898150)
chr3 (285-365)||(8076415-8076495)
chr3 (293-365)||(9563029-9563101)
chr3 (261-365)||(33118849-33118953)
chr3 (261-337)||(35093583-35093659)
chr3 (285-365)||(36331327-36331407)
chr3 (285-365)||(48587089-48587169)
chr3 (260-331)||(36707456-36707527)
chr3 (275-321)||(32605956-32606002)
chr3 (263-365)||(45058551-45058652)
[»] chr2 (32 HSPs)
chr2 (258-365)||(42257188-42257295)
chr2 (263-365)||(40613900-40614002)
chr2 (261-365)||(9058478-9058582)
chr2 (257-365)||(38273140-38273248)
chr2 (262-365)||(5574486-5574589)
chr2 (262-365)||(33436210-33436313)
chr2 (259-365)||(45097733-45097839)
chr2 (268-365)||(19930818-19930915)
chr2 (261-365)||(10249380-10249484)
chr2 (258-365)||(33436098-33436205)
chr2 (263-365)||(13438343-13438445)
chr2 (263-365)||(17473020-17473122)
chr2 (263-365)||(27864704-27864806)
chr2 (263-365)||(28381653-28381755)
chr2 (268-365)||(28863460-28863557)
chr2 (262-363)||(32505648-32505749)
chr2 (263-363)||(4060685-4060785)
chr2 (262-361)||(2533123-2533221)
chr2 (263-365)||(38732354-38732456)
chr2 (263-365)||(40701478-40701580)
chr2 (268-365)||(41575142-41575240)
chr2 (285-365)||(2997485-2997565)
chr2 (262-365)||(7465733-7465836)
chr2 (258-365)||(20700810-20700917)
chr2 (262-365)||(36168835-36168938)
chr2 (312-365)||(13365402-13365455)
chr2 (261-365)||(30915461-30915565)
chr2 (260-331)||(38882846-38882916)
chr2 (263-361)||(43490121-43490219)
chr2 (263-328)||(17820039-17820104)
chr2 (313-365)||(3034981-3035033)
chr2 (313-365)||(3154193-3154245)
[»] chr5 (24 HSPs)
chr5 (262-365)||(6679697-6679800)
chr5 (263-365)||(28177775-28177877)
chr5 (262-365)||(2740273-2740376)
chr5 (259-365)||(13811648-13811754)
chr5 (263-365)||(26720516-26720618)
chr5 (263-365)||(26990265-26990367)
chr5 (263-365)||(35943890-35943992)
chr5 (263-363)||(14831814-14831914)
chr5 (261-365)||(15409608-15409712)
chr5 (262-365)||(2252166-2252269)
chr5 (259-365)||(18520882-18520988)
chr5 (263-365)||(35785199-35785301)
chr5 (263-365)||(40145407-40145509)
chr5 (260-365)||(3921263-3921368)
chr5 (259-363)||(31008984-31009088)
chr5 (286-361)||(42414304-42414379)
chr5 (263-365)||(33149636-33149738)
chr5 (263-363)||(20073516-20073616)
chr5 (261-365)||(36732940-36733044)
chr5 (286-365)||(39557515-39557594)
chr5 (275-365)||(33825322-33825412)
chr5 (261-365)||(39688895-39688999)
chr5 (262-331)||(41470448-41470517)
chr5 (285-337)||(16327923-16327975)
[»] chr1 (28 HSPs)
chr1 (260-365)||(32813244-32813349)
chr1 (263-365)||(27564733-27564835)
chr1 (262-363)||(51898683-51898784)
chr1 (262-365)||(37926436-37926539)
chr1 (259-365)||(8346386-8346492)
chr1 (261-365)||(49811525-49811629)
chr1 (259-365)||(5958998-5959104)
chr1 (268-365)||(44548374-44548471)
chr1 (258-362)||(37649193-37649297)
chr1 (261-361)||(38632323-38632423)
chr1 (260-363)||(2581912-2582015)
chr1 (259-365)||(38595150-38595256)
chr1 (263-365)||(41608491-41608593)
chr1 (263-361)||(48716284-48716382)
chr1 (257-365)||(26440728-26440836)
chr1 (263-365)||(43132-43234)
chr1 (263-365)||(9474874-9474976)
chr1 (263-365)||(47452318-47452420)
chr1 (263-365)||(50590998-50591100)
chr1 (268-361)||(26274437-26274530)
chr1 (264-361)||(44453980-44454077)
chr1 (285-365)||(3000341-3000421)
chr1 (285-365)||(50630480-50630560)
chr1 (290-365)||(41758832-41758907)
chr1 (285-363)||(11152378-11152456)
chr1 (312-363)||(3302533-3302584)
chr1 (306-363)||(48489343-48489400)
chr1 (260-332)||(23597122-23597194)
[»] chr7 (33 HSPs)
chr7 (263-365)||(19329842-19329944)
chr7 (268-365)||(3784000-3784097)
chr7 (264-365)||(35522877-35522978)
chr7 (259-363)||(7727902-7728006)
chr7 (261-365)||(19436185-19436289)
chr7 (262-365)||(3434561-3434664)
chr7 (285-365)||(3694389-3694469)
chr7 (262-365)||(22343360-22343463)
chr7 (262-365)||(36361911-36362014)
chr7 (259-365)||(35468853-35468959)
chr7 (260-365)||(40957704-40957809)
chr7 (261-365)||(7389387-7389491)
chr7 (261-365)||(38044195-38044299)
chr7 (286-365)||(8238236-8238315)
chr7 (262-365)||(36362025-36362128)
chr7 (254-365)||(41915732-41915843)
chr7 (263-365)||(21234401-21234503)
chr7 (263-365)||(32564424-32564526)
chr7 (263-365)||(35137533-35137635)
chr7 (263-357)||(46374808-46374902)
chr7 (268-365)||(32951491-32951588)
chr7 (261-365)||(8080381-8080485)
chr7 (261-365)||(36208171-36208275)
chr7 (262-365)||(26296643-26296746)
chr7 (254-365)||(38837208-38837319)
chr7 (258-365)||(40846111-40846218)
chr7 (262-365)||(46033799-46033902)
chr7 (263-365)||(4999512-4999614)
chr7 (263-365)||(38267040-38267142)
chr7 (259-332)||(18207176-18207249)
chr7 (293-365)||(16374822-16374894)
chr7 (259-339)||(45223038-45223118)
chr7 (263-365)||(41423682-41423784)
[»] chr8 (27 HSPs)
chr8 (262-363)||(37038478-37038579)
chr8 (262-365)||(32032724-32032826)
chr8 (259-365)||(5957826-5957932)
chr8 (263-365)||(43414579-43414681)
chr8 (285-365)||(40423941-40424021)
chr8 (263-365)||(15048180-15048281)
chr8 (263-365)||(15197333-15197435)
chr8 (265-365)||(10621085-10621185)
chr8 (263-365)||(504119-504221)
chr8 (263-365)||(1179938-1180040)
chr8 (259-365)||(16056399-16056505)
chr8 (259-365)||(16383373-16383479)
chr8 (285-365)||(14547944-14548024)
chr8 (261-365)||(15258927-15259031)
chr8 (261-365)||(24307791-24307895)
chr8 (263-365)||(12831047-12831149)
chr8 (263-365)||(23122595-23122697)
chr8 (263-365)||(34012294-34012396)
chr8 (261-365)||(4854861-4854965)
chr8 (261-365)||(34307214-34307318)
chr8 (261-365)||(42221513-42221617)
chr8 (263-365)||(30479472-30479574)
chr8 (260-365)||(10284629-10284734)
chr8 (285-365)||(8841430-8841510)
chr8 (262-318)||(25838196-25838252)
chr8 (259-326)||(24307625-24307692)
chr8 (312-365)||(9122234-9122287)
[»] scaffold0321 (1 HSPs)
scaffold0321 (254-365)||(10107-10218)
[»] chr4 (25 HSPs)
chr4 (263-365)||(41236347-41236449)
chr4 (259-365)||(50052426-50052532)
chr4 (263-363)||(50526171-50526271)
chr4 (261-365)||(55475189-55475293)
chr4 (254-365)||(19670714-19670825)
chr4 (262-365)||(47986207-47986310)
chr4 (295-365)||(56300163-56300233)
chr4 (261-361)||(29547961-29548061)
chr4 (261-365)||(32766956-32767060)
chr4 (263-365)||(6034044-6034146)
chr4 (259-365)||(42044365-42044471)
chr4 (260-365)||(29239883-29239988)
chr4 (261-365)||(48183047-48183151)
chr4 (263-365)||(40574779-40574881)
chr4 (262-365)||(44536744-44536846)
chr4 (262-365)||(50813890-50813993)
chr4 (259-365)||(480445-480551)
chr4 (263-365)||(11511460-11511562)
chr4 (263-365)||(31910192-31910294)
chr4 (285-365)||(17983741-17983821)
chr4 (286-365)||(29977908-29977987)
chr4 (263-365)||(3481654-3481756)
chr4 (263-365)||(8343161-8343263)
chr4 (312-365)||(41823931-41823984)
chr4 (263-361)||(54473535-54473633)
[»] scaffold1268 (1 HSPs)
scaffold1268 (263-365)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (263-365)||(927-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (263-365)||(4029-4131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (288-365)||(152523-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (286-365)||(17077-17156)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 7e-99; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 34883411 - 34883636
Alignment:
Q  18 acaaggatcattcatgactgagtttgtgatttacatgcatattacgtggcttcttatcctctttccatctcattgttgtttaacttcc------atacat 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||||    
T  34883411 acaaggatcattcatgagtgagtttgtgatttacatgcatattacgtggcttcttatcctctttccatctcattgttgtttaatttccaattccatacat 34883510  T
Q  112 atattgctattttcacccctcacttttcctaatcattaatagagtaacacaaatagcatccgttttaacgtattctttctaaaatttactttttcattag 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34883511 atattgctattttcacccctcacttttcctaatcattaatagagtaacacaaatagcatccattttaacgtattctttctcaaatttactttttcattag 34883610  T
Q  212 ataaaatatatatgggtcttaccact 237  Q
    |||||| |||||||||||||||||||    
T  34883611 ataaaacatatatgggtcttaccact 34883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 31110864 - 31110759
Alignment:
Q  258 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    |||||||||||||||| ||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||| | || ||||| ||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T
Q  358 ctttctct 365  Q
    ||||||||    
T  31110766 ctttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  363 tct 365  Q
    |||    
T  17598654 tct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 11427640 - 11427720
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  11427640 ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||| |||  ||||||||||||||||||||| ||| ||| | || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  362 ctct 365  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 23128236 - 23128125
Alignment:
Q  254 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 353  Q
    ||||||||||| | |||||| |||||||  |||| |||  |||||||| |||||||  ||||||||||||||||||||  |||  |||||||  ||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaag 23128137  T
Q  354 cacactttctct 365  Q
    ||||||||||||    
T  23128136 cacactttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  360 ttctct 365  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 365
Target Start/End: Original strand, 15832567 - 15832679
Alignment:
Q  253 atttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaa 352  Q
    ||||| |||||||| |||||| |||||||  |||||||| ||||| ||| |||||||  ||||||||||| ||||||||  |||  ||||||||||||||    
T  15832567 attttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T
Q  353 gcacactttctct 365  Q
      ||| |||||||    
T  15832667 atacattttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  361 tctct 365  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 32869700 - 32869780
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  32869700 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||  ||| ||||  ||||||||||||||| |  ||| ||  |||||||||||||||||||||  |||||||| || ||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  363 tct 365  Q
    |||    
T  4231648 tct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  363 tct 365  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  363 tct 365  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    ||||||| |||||| |||||||   |||||||||||||||   ||||||| ||||||||||||||| |||||  |||  |||| || |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  360 ttctct 365  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 22880753 - 22880656
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||| ||||||||||  |||  |||| || |||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 331  Q
    |||| ||||| ||||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 12732478 - 12732584
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| ||||||||| ||| ||||||||| |    ||||||  |||||||||||||||||||||   || |||||||  || |||||||     
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  359 tttctct 365  Q
    |||||||    
T  12732578 tttctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 328  Q
    ||||| |||||| ||||||||  ||||||||||||| |||| |||||| ||| |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 28536581 - 28536486
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||||  | |||| |||| ||  ||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  363 tct 365  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 365
Target Start/End: Complemental strand, 11348028 - 11347920
Alignment:
Q  257 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 356  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||||  || ||||| |||||| ||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T
Q  357 actttctct 365  Q
    |||||||||    
T  11347928 actttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| ||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  363 tct 365  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  |||| |||||||||| ||||| |||| ||||||| |||||||||||||  |||||| | || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  363 tct 365  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||  ||||||||| |||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  361 tctct 365  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||  |||| |||||| |||||||||  || ||||| || ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  361 tctct 365  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||||||  |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  359 tttctct 365  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||  |||||||||||||||| ||||| |||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  362 ctct 365  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  |||| || ||||||||| ||| |||  |||||||||||||||||||||  || || || || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  363 tct 365  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  363 tct 365  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 26754717 - 26754797
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| | || ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  26754717 ttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  361 tctct 365  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||||  ||| ||||||||||||| |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  362 ctct 365  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 31456712 - 31456791
Alignment:
Q  286 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||| ||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  31456712 taggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   || |||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  363 tct 365  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 52629304 - 52629402
Alignment:
Q  267 tatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| |||||||   ||||||| |||||||    |  ||| |||||||||||||||||| ||| ||||||||| || ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  361 tctct 365  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 25407193 - 25407145
Alignment:
Q  317 aaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  25407193 aaaaatctgacacgtgatcatatggatcccacacaaacacactttctct 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||| ||||||  ||  |||| |||| |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  362 ctct 365  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||||  ||| ||||||||||| | |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  362 ctct 365  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 11095455 - 11095385
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 331  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  363 tct 365  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||| | ||||||||  |||||||| ||||||   ||| |||  |||||||||||||||||||||  || ||||| || | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  363 tct 365  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 13898150 - 13898053
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  |||| |||||||||||||||| |||| |||| |   ||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 8076415 - 8076495
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8076415 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 9563029 - 9563101
Alignment:
Q  293 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||| | |||||||| || | |||||||||||||||  |||  |||||||||||||| ||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||| ||||||||  |||  |||||||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  361 tctct 365  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 35093583 - 35093659
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 337  Q
    |||||||| |||| |||||||  |||||||| ||||||| | |||||||| ||| ||||||||||||| ||| ||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcat 35093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||| || |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 48587169 - 48587089
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||    
T  48587169 ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 36707527 - 36707456
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 331  Q
    ||||||| |||||| ||||| |   ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 32606002 - 32605956
Alignment:
Q  275 atagacatttttaggtggcaatacatcttttgacattcacacaaaaa 321  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||    
T  32606002 atagacaatcttaggtggcaatacattctttgacattcacacaaaaa 32605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| |||   ||||||||||||||| | || ||||  |||| |||||||||||| |||| |||||||| || ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  363 tct 365  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 7e-28; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 365
Target Start/End: Original strand, 42257188 - 42257295
Alignment:
Q  258 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||  || ||||| || |||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T
Q  358 ctttctct 365  Q
    ||||||||    
T  42257288 ctttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  363 tct 365  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  361 tctct 365  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 365
Target Start/End: Complemental strand, 38273248 - 38273140
Alignment:
Q  257 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 356  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| | ||| |||  ||||||||||||||||||||   || ||||| || |||| |||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T
Q  357 actttctct 365  Q
    |||||||||    
T  38273148 actttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  362 ctct 365  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||||||||||| ||| ||||   ||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  362 ctct 365  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 45097839 - 45097733
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||  ||||||  || |||||||||||||| |||  |||||||| || ||||||| ||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  359 tttctct 365  Q
    |||||||    
T  45097739 tttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 19930915 - 19930818
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||| ||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  361 tctct 365  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 33436205 - 33436098
Alignment:
Q  258 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    ||||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T
Q  358 ctttctct 365  Q
    ||||||||    
T  33436105 ctttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||| ||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  363 tct 365  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  363 tct 365  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||| ||||||||||| | |||||||| |||||||||||||||||||| ||||  |||| || ||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  363 tct 365  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| |||| ||||  ||||||||||||||||||||  ||| |||||  | ||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  363 tct 365  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 28863460 - 28863557
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 363
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  362 ct 363  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  363 t 363  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||  ||||||||||||||||||||   || || || || |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| |||   ||| ||| |||||||||  ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  363 tct 365  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  363 tct 365  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 41575142 - 41575240
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatgga-tcctgcacaagcacactttctct 365  Q
    |||||| ||||||||  |||| ||| |||||| | |||||||||||||||||||| ||||| ||| |||| ||||  ||| ||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  362 ctct 365  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 365
Target Start/End: Original strand, 20700810 - 20700917
Alignment:
Q  258 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    ||||||||| |||||| ||||||||  ||| ||||||||||| | ||||||    |||||||||||||||||||  |||  |||| || ||| |||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T
Q  358 ctttctct 365  Q
    ||||||||    
T  20700910 ctttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||||||||  |||| || ||||||||| ||| ||   ||||||||||| |||||||||  || ||||| || ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  362 ctct 365  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 13365402 - 13365455
Alignment:
Q  312 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||||| |||| |||||||| || ||||||| |||||||||||    
T  13365402 cacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||||||||||||||| | ||||||   |||| |||||||||||||||  |||  |||| || | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  361 tctct 365  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 38882916 - 38882846
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 331  Q
    ||||||| |||||| |||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 361
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||||||||| ||| |||   ||||||| ||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 17820104 - 17820039
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 328  Q
    ||||||||||| |||||||  | |||||||||||||| |  ||||||  |||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  313 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||||||| ||| ||||||||| || ||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  313 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||||||||||| ||| |||||||| || ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  362 ctct 365  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  363 tct 365  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  362 ctct 365  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| | |||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  359 tttctct 365  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  363 tct 365  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  363 tct 365  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  | |  |||||||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  363 tct 365  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 363
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| ||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  363 t 363  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||||||||  ||||||| ||||||||  |||||||  ||||||||||||||||||||   || ||||| || |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  361 tctct 365  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  362 ctct 365  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 18520988 - 18520882
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||| | |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  359 tttctct 365  Q
    |||||||    
T  18520888 tttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  ||||||| |||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  363 tct 365  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| | ||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  363 tct 365  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  360 ttctct 365  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||  ||  |||  ||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  359 tttct 363  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 42414379 - 42414304
Alignment:
Q  286 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  363 tct 365  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||||  |||| || ||||||| | ||||||| ||||| ||||||||  ||||||| ||  |||| |||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  363 t 363  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   |||||| |||||||| | |||||||  |||||||||||||||||| |  |||  |||| || ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  361 tctct 365  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 39557594 - 39557515
Alignment:
Q  286 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||| |||||| || || |||| ||||||||||||||||||||||||| ||||| ||   |||| ||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 33825412 - 33825322
Alignment:
Q  275 atagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||| |||||||||||||||    ||||||  |||| |||||||||||||||| |||| || | | | ||||||||||||||||||    
T  33825412 atagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| |||   ||| |||||||||||||  ||||||  ||||||||||||||| | ||| ||||||| | || ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  361 tctct 365  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 41470517 - 41470448
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 331  Q
    ||||| || ||| |||||||  |||||||||||||||||| ||| | ||||| | |||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgt 41470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 16327923 - 16327975
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 337  Q
    |||||||||||||||||  ||||||  |||| |||||||||||||||| ||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcat 16327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 365
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    |||||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| || |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  360 ttctct 365  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  363 tct 365  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 363
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  362 ct 363  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||  |||| ||||||||||||||||  || |||||||| | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  362 ctct 365  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 8346492 - 8346386
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| |||| ||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| |||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  359 tttctct 365  Q
    |||||||    
T  8346392 tttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||||||||  ||||||| ||||||| | |||||||| ||||||||||||||||||||   ||||| ||  | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  361 tctct 365  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 5959104 - 5958998
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    ||||||||||||||| ||| |||   ||| ||||||||||| || ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  359 tttctct 365  Q
    |||||||    
T  5959004 tttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 44548471 - 44548374
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| |||||||| |||||||||||||||| | ||||| |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 37649193 - 37649297
Alignment:
Q  258 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   |||||||  ||||||||||||||||||||| |||  || || | |||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T
Q  358 ctttc 362  Q
    |||||    
T  37649293 ctttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||||||||||||||| ||||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  361 t 361  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 363
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  360 ttct 363  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 38595150 - 38595256
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| ||| |||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  359 tttctct 365  Q
    |||||||    
T  38595250 tttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  363 tct 365  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 361
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 365
Target Start/End: Original strand, 26440728 - 26440836
Alignment:
Q  257 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 356  Q
    ||||| |||||| |||| ||||||||  |||| || ||||||| | ||| |||  |||||||||||||||||||||  || |||||||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  357 actttctct 365  Q
    |||||||||    
T  26440828 actttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||||||  |||  ||||  | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  363 tct 365  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  363 tct 365  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||| ||||||  |||  ||||||| ||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  363 tct 365  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  363 tct 365  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 26274437 - 26274530
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||| |||||||   ||| ||||||||||||| |||||||| |||| ||||||||||||| |  |||  ||||||||||||||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 44453980 - 44454077
Alignment:
Q  264 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||| |||||||  |||| |||||||||||||| |||| |  ||||||||||||||||| ||| | |  |||||||  ||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 3000341 - 3000421
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  3000341 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 50630480 - 50630560
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||||| ||||  |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  50630480 ttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 41758832 - 41758907
Alignment:
Q  290 tggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||| | |||||||  ||||||||||||||||||||  ||| ||||| || |||||| ||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 11152456 - 11152378
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 363  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||  |||| | || || |||||||||| ||||||    
T  11152456 ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 3302584 - 3302533
Alignment:
Q  312 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 363  Q
    |||||||||||||||||||| |||||||||| ||   |||||||||||||||    
T  3302584 cacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  306 gacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 363  Q
    ||||| ||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 23597194 - 23597122
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 332  Q
    ||||||| |||||| ||||||||  |||||||||||||||   ||||| |  |||| ||||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  363 tct 365  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 268 - 365
Target Start/End: Original strand, 3784000 - 3784097
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 365
Target Start/End: Original strand, 35522877 - 35522978
Alignment:
Q  264 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 363  Q
    |||||||||| ||||||||  ||| ||||||||||| | ||| |||  |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  364 ct 365  Q
    ||    
T  35522977 ct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 7727902 - 7728006
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    ||||||||||||||| ||| |||   |||||||| |||||| || |||||||||||| |||||||||||| ||| ||||||||| || ||||||| ||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacac 7728001  T
Q  359 tttct 363  Q
    |||||    
T  7728002 tttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| ||||||||  ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  ||||||| ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  361 tctct 365  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  |||||||||| |||||||||  |||  ||||||| |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  362 ctct 365  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 3694389 - 3694469
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||| ||||||| ||||| |||  ||||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  3694389 ttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  362 ctct 365  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  362 ctct 365  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 35468959 - 35468853
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| ||||||||  |||| |||||||||||| |||||||  |||| |||||||| | | |||| ||| |||| ||||||||| |||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  359 tttctct 365  Q
    |||||||    
T  35468859 tttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 365
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    ||||||| |||||| ||||||| | |||||||||||||||   ||||| |  ||||||||||||||||||||  |||  ||||||| | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  360 ttctct 365  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   |||||||||||||||   |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  361 tctct 365  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||| ||||||||||||||||| ||   |||||||| || ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  361 tctct 365  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 8238236 - 8238315
Alignment:
Q  286 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||||| | |||||||  ||||||||||||||||| ||  ||||||||| || ||||||| |||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||   |||||||| |||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  362 ctct 365  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 365
Target Start/End: Original strand, 41915732 - 41915843
Alignment:
Q  254 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 353  Q
    ||||||| |||||||||||| ||| |||   ||||||||||||||| |  ||||||   |||||||||||||||| |||  |||||||| || |||||||    
T  41915732 tttttaatagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T
Q  354 cacactttctct 365  Q
     |||||||||||    
T  41915832 tacactttctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||| ||||||| | ||||||| |||||||||||| ||||||||   || ||| | || ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  363 tct 365  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||  ||||||||||||||||| |||   ||||||| || ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  363 tct 365  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| ||||||||||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  363 tct 365  Q
    |||    
T  35137633 tct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    ||||||||||| ||||||||  ||||||||||| ||| | ||| |||  |||||||||||||||||||||  || ||||| || |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 32951588 - 32951491
Alignment:
Q  268 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||| ||||||| | |||| || ||||||||| ||| |||| ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  |||| || ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  361 tctct 365  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| |||||||   |||||||| |||||||   ||||||  |||||||||| |||||| ||| |||  |||| |||||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  361 tctct 365  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||| |||| |||| |||||||||| |||||  |||||||| || |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  362 ctct 365  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 365
Target Start/End: Original strand, 38837208 - 38837319
Alignment:
Q  254 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 353  Q
    |||| |||||||| |||||| |||||||   ||||||||||||||| | ||  |||   |||||||||||||||||||  |||  |||| || |||||||    
T  38837208 ttttcaaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaag 38837307  T
Q  354 cacactttctct 365  Q
    ||||||||||||    
T  38837308 cacactttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 40846218 - 40846111
Alignment:
Q  258 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 357  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |  ||||||| ||||||||||||| ||| ||  | ||||||| || ||||||  |||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaataca 40846119  T
Q  358 ctttctct 365  Q
    ||||||||    
T  40846118 ctttctct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||||| ||| ||||||||||||||| | ||| |||  |||| |||||||||||||||| ||| ||| |  | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  362 ctct 365  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||| |||||||||| |||||||||  ||||||||||||||| ||||  |||  |||| || |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  363 tct 365  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||| ||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  363 tct 365  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 18207176 - 18207249
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 332  Q
    ||||||||||||||| |||||||   ||||||||||||||| || ||||||  || |||||||||| |||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtg 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  293 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||  ||||||| ||||||||||||||||||||| |||  ||||||   ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 45223038 - 45223118
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatat 339  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatat 45223118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  |||| ||| |||||| || |||||| | |||||||||||||||| ||| |||  | ||||| | ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  363 tct 365  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 363
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  362 ct 363  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||| |||   ||||||||||||||||| || ||||| ||||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  362 ctct 365  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 5957826 - 5957932
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||| ||| |||||| ||||||||| ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||| |||||    
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  359 tttctct 365  Q
    |||||||    
T  5957926 tttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 43414681 - 43414579
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  |||| |||||| ||| | |||||||  ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  363 tct 365  Q
    |||    
T  43414581 tct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 40424021 - 40423941
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  40424021 ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||   || ||||| || ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  363 tct 365  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  363 tct 365  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 10621185 - 10621085
Alignment:
Q  265 gttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctc 364  Q
    ||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||||   || || ||||| ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  365 t 365  Q
    |    
T  10621085 t 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  363 tct 365  Q
    |||    
T  504121 tct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  363 tct 365  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 16056505 - 16056399
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    ||||||||||||||| ||| ||||  ||| ||| |||||||||  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  359 tttctct 365  Q
    |||||||    
T  16056405 tttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 16383373 - 16383479
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    ||||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  359 tttctct 365  Q
    |||||||    
T  16383473 tttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 14547944 - 14548024
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  14547944 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||||| | | |||| ||||||||||||  | ||||| |||| |||||||||||| ||| |||  |||| |||||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  361 tctct 365  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| |||   |||||||||||||||||  ||||||  ||||||||||||||| | |||  |||||||| || ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  361 tctct 365  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  363 tct 365  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||| ||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  363 tct 365  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  363 tct 365  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| ||||||||  ||||||||||||||| | ||| |||   ||| |||||||||| | |||  || ||||| |||||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  361 tctct 365  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||| | || ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  361 tctct 365  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| ||| ||||  ||||||| ||||||||   | ||||  |||||||||||||||||||| |||||||||| ||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  361 tctct 365  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 30479574 - 30479472
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| |||   ||||||||||||||| | |||||||| |||| |||||||||||| |||   ||||||| |  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  363 tct 365  Q
    |||    
T  30479474 tct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    |||||||||||||| |||||||   ||| ||| |||||||   |||||||  ||||||||||| ||||||||  |||  |||| || |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  360 ttctct 365  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaa 318  Q
    |||||||||||||||||| ||  |||||||||||||||  ||||||||| |||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 24307625 - 24307692
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 326  Q
    ||||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 9122234 - 9122287
Alignment:
Q  312 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||||| ||  |||  ||||||| |||||||||||||||||||    
T  9122234 cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 10218 - 10107
Alignment:
Q  254 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 353  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||  |||  |||| |  | |||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaag 10119  T
Q  354 cacactttctct 365  Q
    ||||||||||||    
T  10118 cacactttctct 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  363 tct 365  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 50052532 - 50052426
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  359 tttctct 365  Q
    |||||||    
T  50052432 tttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||  ||||| | |||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  363 t 363  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| ||||  ||||||||||||||| | |||||||  ||||||||||||||||| |||  |||||||| |||||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  361 tctct 365  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 19670825 - 19670714
Alignment:
Q  254 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 353  Q
    |||| ||||||||||||||| ||| |||   ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || |||||||    
T  19670825 ttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T
Q  354 cacactttctct 365  Q
     |||||||||||    
T  19670725 tacactttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 365
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||| |||   |||||||||||||||||  ||||||| ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  362 ctct 365  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 56300233 - 56300163
Alignment:
Q  295 atacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctct 56300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| ||||  |||||||||||||||||  ||||||  ||||||||||||||||| |||  ||||||||||| ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  361 t 361  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||  || |||||||||||||| |||  |||||||| |||||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  361 tctct 365  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||| ||  |||  ||||||| ||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  363 tct 365  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 42044471 - 42044365
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  359 tttctct 365  Q
    |||||||    
T  42044371 tttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 365
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  260 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 359  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||| ||||||  |||  |||| ||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  360 ttctct 365  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  261 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 360  Q
    |||||| |||||| |||||||   ||| ||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  361 tctct 365  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacg-tgatcatatggatcctgcacaagcacacttt 361  Q
    ||||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||| || | | |||||||| | |||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgct-acatggatcccgaacaagcacacttt 40574877  T
Q  362 ctct 365  Q
    ||||    
T  40574878 ctct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||| ||| |||||| || ||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  362 ctct 365  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 365
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  262 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||||||||||| ||| ||| | |||||||| |||||| |  ||||||  ||||||||||||||||| ||| ||||||| | || ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  362 ctct 365  Q
    ||||    
T  50813893 ctct 50813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 365
Target Start/End: Complemental strand, 480551 - 480445
Alignment:
Q  259 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 358  Q
    |||||||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  359 tttctct 365  Q
    |||||||    
T  480451 tttctct 480445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  |||| || ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  363 tct 365  Q
    |||    
T  11511462 tct 11511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||||||||  ||||||| |||||||   |||||||  |||||||||||||||||| |   || ||||| || ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  363 tct 365  Q
    |||    
T  31910292 tct 31910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  285 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 29977908 - 29977987
Alignment:
Q  286 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||  ||||||||| ||  ||||||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctct 29977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||  ||||||||||||||||   |||||||  |||||||||||||||||| |  |||  |||| ||  |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  363 tct 365  Q
    |||    
T  3481754 tct 3481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    ||||||||||| ||| ||||  ||||||||||||||||| |||||||   ||| |||||||||||| |||  |||||||| || ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  363 tct 365  Q
    |||    
T  8343163 tct 8343161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 41823931 - 41823984
Alignment:
Q  312 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||||||||||||||||||  ||| ||||| || |||||||||||||||||||    
T  41823931 cacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 361
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 361  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  363 tct 365  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  363 tct 365  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  263 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 362  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  363 tct 365  Q
    |||    
T  4129 tct 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 152523 - 152600
Alignment:
Q  288 ggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    |||||||||||| |  ||||||  ||||||||||||||||| ||| |||||||||||| ||||||  |||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 17077 - 17156
Alignment:
Q  286 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 365  Q
    ||||| ||||||||||  | ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University