View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5829_high_1 (Length: 581)

Name: NF5829_high_1
Description: NF5829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5829_high_1
NF5829_high_1
[»] chr4 (39 HSPs)
chr4 (19-339)||(7342058-7342378)
chr4 (380-564)||(7341872-7342059)
chr4 (211-283)||(4191663-4191736)
chr4 (216-310)||(485978-486073)
chr4 (213-320)||(30024587-30024694)
chr4 (217-319)||(19304816-19304918)
chr4 (213-307)||(24443938-24444032)
chr4 (213-283)||(36734817-36734887)
chr4 (225-286)||(969433-969494)
chr4 (213-310)||(8703696-8703795)
chr4 (217-319)||(23676604-23676707)
chr4 (213-284)||(54325113-54325184)
chr4 (213-319)||(22684592-22684698)
chr4 (257-319)||(54414837-54414899)
chr4 (262-319)||(33640996-33641053)
chr4 (215-276)||(47970249-47970310)
chr4 (211-275)||(51044532-51044597)
chr4 (226-283)||(51555956-51556013)
chr4 (214-290)||(24160572-24160648)
chr4 (213-276)||(9680595-9680658)
chr4 (173-204)||(23819123-23819154)
chr4 (213-284)||(44319873-44319943)
chr4 (213-283)||(5219576-5219646)
chr4 (213-299)||(24193493-24193579)
chr4 (213-251)||(31038943-31038981)
chr4 (259-319)||(4243228-4243289)
chr4 (211-276)||(7731701-7731766)
chr4 (226-319)||(8422926-8423019)
chr4 (213-286)||(19422339-19422412)
chr4 (278-319)||(36048415-36048456)
chr4 (216-276)||(6987820-6987880)
chr4 (213-265)||(19691349-19691401)
chr4 (213-265)||(19701934-19701986)
chr4 (216-276)||(20907104-20907164)
chr4 (212-244)||(24929456-24929488)
chr4 (257-325)||(25548649-25548717)
chr4 (213-289)||(32724037-32724113)
chr4 (226-286)||(44019444-44019504)
chr4 (211-275)||(50396646-50396709)
[»] chr5 (31 HSPs)
chr5 (212-319)||(41052778-41052885)
chr5 (213-307)||(20982211-20982305)
chr5 (230-319)||(26516186-26516275)
chr5 (214-320)||(6738484-6738590)
chr5 (226-319)||(29115302-29115395)
chr5 (213-299)||(37063150-37063236)
chr5 (232-309)||(16945076-16945155)
chr5 (211-274)||(7096201-7096264)
chr5 (213-311)||(9860874-9860972)
chr5 (213-283)||(19177403-19177473)
chr5 (225-309)||(32172551-32172635)
chr5 (213-285)||(35135738-35135810)
chr5 (211-318)||(37611267-37611372)
chr5 (211-318)||(37787997-37788102)
chr5 (223-319)||(39257472-39257568)
chr5 (213-244)||(14295469-14295500)
chr5 (213-244)||(28586842-28586873)
chr5 (221-319)||(6739760-6739858)
chr5 (231-309)||(29588778-29588856)
chr5 (216-246)||(38831535-38831565)
chr5 (213-243)||(41277426-41277456)
chr5 (213-242)||(583849-583878)
chr5 (215-244)||(985596-985625)
chr5 (257-318)||(2569822-2569883)
chr5 (87-132)||(17369309-17369354)
chr5 (213-242)||(32059665-32059694)
chr5 (216-291)||(11835192-11835268)
chr5 (216-244)||(29117009-29117037)
chr5 (217-285)||(31694440-31694508)
chr5 (258-310)||(33961600-33961652)
chr5 (218-286)||(35095864-35095932)
[»] scaffold0590 (1 HSPs)
scaffold0590 (213-319)||(1150-1256)
[»] scaffold0275 (1 HSPs)
scaffold0275 (213-319)||(2719-2825)
[»] chr6 (24 HSPs)
chr6 (217-319)||(9027465-9027567)
chr6 (222-299)||(2514610-2514687)
chr6 (215-310)||(33068639-33068734)
chr6 (213-307)||(3217266-3217360)
chr6 (213-307)||(18264231-18264323)
chr6 (217-308)||(32386179-32386270)
chr6 (257-319)||(33828534-33828596)
chr6 (213-282)||(10154146-10154215)
chr6 (211-251)||(31964669-31964710)
chr6 (218-319)||(32975866-32975967)
chr6 (213-285)||(323733-323805)
chr6 (234-310)||(31461575-31461651)
chr6 (214-301)||(9732382-9732469)
chr6 (213-284)||(29274305-29274376)
chr6 (213-247)||(3204618-3204652)
chr6 (213-298)||(7351684-7351769)
chr6 (217-310)||(8349744-8349837)
chr6 (220-285)||(8420280-8420345)
chr6 (213-282)||(10452436-10452505)
chr6 (211-244)||(31672542-31672575)
chr6 (216-276)||(20671944-20672004)
chr6 (229-300)||(27727165-27727237)
chr6 (214-274)||(29940729-29940789)
chr6 (211-251)||(31968091-31968131)
[»] chr2 (28 HSPs)
chr2 (213-321)||(28803582-28803690)
chr2 (220-306)||(36852366-36852452)
chr2 (213-299)||(4550685-4550771)
chr2 (217-315)||(10143064-10143162)
chr2 (211-319)||(32098382-32098493)
chr2 (213-310)||(33192090-33192187)
chr2 (213-284)||(17952777-17952848)
chr2 (225-291)||(33197327-33197393)
chr2 (213-306)||(34054977-34055075)
chr2 (213-284)||(11513824-11513892)
chr2 (86-142)||(22878194-22878250)
chr2 (225-276)||(25609727-25609778)
chr2 (224-319)||(31461326-31461421)
chr2 (258-300)||(44589941-44589984)
chr2 (213-243)||(5043636-5043666)
chr2 (213-310)||(6926518-6926612)
chr2 (158-275)||(7282950-7283076)
chr2 (213-291)||(14209193-14209271)
chr2 (213-275)||(18962114-18962176)
chr2 (213-298)||(25790037-25790120)
chr2 (218-276)||(27288564-27288622)
chr2 (214-244)||(33942113-33942143)
chr2 (257-311)||(43808472-43808526)
chr2 (257-310)||(13189507-13189560)
chr2 (215-244)||(29429835-29429864)
chr2 (257-306)||(41949966-41950015)
chr2 (213-241)||(33256706-33256734)
chr2 (258-306)||(37844847-37844895)
[»] chr8 (32 HSPs)
chr8 (211-310)||(20672669-20672768)
chr8 (217-319)||(14482090-14482192)
chr8 (216-319)||(10079142-10079245)
chr8 (222-317)||(27320206-27320300)
chr8 (213-319)||(4558686-4558792)
chr8 (260-310)||(27754556-27754606)
chr8 (213-319)||(35453699-35453805)
chr8 (217-283)||(35534941-35535007)
chr8 (213-307)||(35869737-35869831)
chr8 (211-308)||(40280279-40280376)
chr8 (257-319)||(43208253-43208315)
chr8 (211-276)||(14929190-14929255)
chr8 (214-306)||(29699155-29699247)
chr8 (279-318)||(4271836-4271875)
chr8 (216-247)||(6918258-6918289)
chr8 (272-319)||(6950224-6950271)
chr8 (212-319)||(34563138-34563245)
chr8 (212-291)||(40357815-40357894)
chr8 (220-298)||(39392744-39392822)
chr8 (224-290)||(40356788-40356854)
chr8 (213-319)||(41336721-41336827)
chr8 (214-276)||(42597332-42597394)
chr8 (211-245)||(43907873-43907907)
chr8 (213-246)||(1112218-1112251)
chr8 (257-310)||(12972753-12972806)
chr8 (211-283)||(14949812-14949884)
chr8 (216-277)||(26215426-26215487)
chr8 (278-319)||(34290800-34290841)
chr8 (211-296)||(36643945-36644030)
chr8 (216-277)||(37444494-37444555)
chr8 (258-310)||(12496575-12496627)
chr8 (217-285)||(40728498-40728566)
[»] chr7 (28 HSPs)
chr7 (213-307)||(9527166-9527260)
chr7 (211-283)||(7244626-7244698)
chr7 (217-291)||(3610820-3610894)
chr7 (216-308)||(30133950-30134040)
chr7 (213-310)||(45593795-45593891)
chr7 (213-267)||(5006585-5006639)
chr7 (213-307)||(12835013-12835107)
chr7 (213-319)||(25659958-25660063)
chr7 (213-291)||(27121662-27121740)
chr7 (213-319)||(27481370-27481476)
chr7 (221-319)||(31341082-31341180)
chr7 (213-275)||(33894555-33894616)
chr7 (224-310)||(49060437-49060523)
chr7 (213-286)||(35536028-35536101)
chr7 (217-310)||(47003984-47004077)
chr7 (210-282)||(3241366-3241438)
chr7 (212-244)||(30160965-30160997)
chr7 (211-251)||(33601167-33601207)
chr7 (217-275)||(28165023-28165081)
chr7 (217-247)||(31338468-31338498)
chr7 (234-319)||(22388001-22388086)
chr7 (213-242)||(29363483-29363512)
chr7 (215-275)||(5276156-5276216)
chr7 (213-281)||(24973870-24973938)
chr7 (258-310)||(28844383-28844435)
chr7 (259-319)||(39630509-39630569)
chr7 (212-244)||(44239055-44239087)
chr7 (211-243)||(47616704-47616736)
[»] chr3 (29 HSPs)
chr3 (213-319)||(38462169-38462275)
chr3 (215-299)||(41028929-41029013)
chr3 (217-319)||(20504100-20504202)
chr3 (213-275)||(20192682-20192744)
chr3 (213-320)||(23785140-23785249)
chr3 (213-283)||(27792796-27792866)
chr3 (211-316)||(39971210-39971315)
chr3 (261-310)||(21574389-21574438)
chr3 (212-269)||(40122827-40122884)
chr3 (214-319)||(51278234-51278339)
chr3 (216-276)||(12923404-12923464)
chr3 (86-142)||(21872213-21872269)
chr3 (211-283)||(44284132-44284204)
chr3 (213-284)||(22232749-22232820)
chr3 (216-299)||(36101476-36101559)
chr3 (173-212)||(36646387-36646426)
chr3 (213-244)||(49586992-49587023)
chr3 (217-247)||(1816543-1816573)
chr3 (257-319)||(28289241-28289303)
chr3 (224-266)||(32555068-32555110)
chr3 (213-283)||(32703062-32703132)
chr3 (213-274)||(1395604-1395665)
chr3 (213-270)||(8007771-8007828)
chr3 (257-310)||(29094278-29094331)
chr3 (225-290)||(41159026-41159091)
chr3 (211-283)||(16790430-16790502)
chr3 (257-313)||(28842977-28843033)
chr3 (215-283)||(52450130-52450198)
chr3 (212-244)||(53457340-53457372)
[»] chr1 (30 HSPs)
chr1 (213-319)||(17420091-17420197)
chr1 (259-319)||(24263261-24263321)
chr1 (211-283)||(42550165-42550237)
chr1 (213-283)||(44032075-44032145)
chr1 (213-310)||(23895233-23895330)
chr1 (216-310)||(48282029-48282125)
chr1 (213-244)||(15360857-15360888)
chr1 (213-276)||(33527223-33527286)
chr1 (213-288)||(34380364-34380439)
chr1 (218-273)||(43029482-43029537)
chr1 (213-276)||(45999364-45999427)
chr1 (217-276)||(46499934-46499993)
chr1 (215-300)||(4549772-4549858)
chr1 (214-244)||(12477364-12477394)
chr1 (211-285)||(23373364-23373438)
chr1 (213-251)||(27738256-27738294)
chr1 (213-319)||(44936666-44936772)
chr1 (211-269)||(50319230-50319288)
chr1 (211-244)||(14737779-14737812)
chr1 (218-251)||(40943465-40943498)
chr1 (213-282)||(45107548-45107616)
chr1 (269-310)||(48133071-48133112)
chr1 (213-286)||(52286599-52286672)
chr1 (215-319)||(608343-608447)
chr1 (213-281)||(6933037-6933105)
chr1 (213-310)||(26184652-26184745)
chr1 (217-289)||(28909910-28909980)
chr1 (213-269)||(35080146-35080202)
chr1 (211-275)||(38651483-38651547)
chr1 (223-319)||(49173293-49173389)
[»] scaffold0024 (1 HSPs)
scaffold0024 (213-300)||(27483-27570)
[»] scaffold0508 (1 HSPs)
scaffold0508 (213-300)||(9851-9938)
[»] scaffold0072 (1 HSPs)
scaffold0072 (213-310)||(4869-4966)
[»] scaffold0349 (1 HSPs)
scaffold0349 (229-300)||(5744-5816)


Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 19 - 339
Target Start/End: Complemental strand, 7342378 - 7342058
Alignment:
Q  19 acataccatatgctactgcaatgcctaacacaatatcaaagttttgttatctccacgactgacggtcatgtttggattgacttatatgatcttatcaact 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7342378 acataccatatgctactgcaatgcctaacacaatatcaaagttttgttatctccaggactgacggtcatgtttggattgacttatatgatcttatcaact 7342279  T
Q  119 gaaataatcacttgcgagactgttgtagttgacagatgaaaacaagttataatgtgtccataagttgttttcatcttatttctatagactctcttatgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7342278 gaaataatcacttgcgagactgttgtagttgacagatgaaaacaagttataatgtgtccgtaagttgttttcatcttatttctatagactctcttatgaa 7342179  T
Q  219 aacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgttta 318  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7342178 aacagtttgactttattttatcttttactgtagtaagtgcttatacataagcacttatctgataagcatttatactataagcacttaattaaaatgttta 7342079  T
Q  319 tgaaagcgaagctcatgacta 339  Q
    | |||||||||||||||||||    
T  7342078 tcaaagcgaagctcatgacta 7342058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 380 - 564
Target Start/End: Complemental strand, 7342059 - 7341872
Alignment:
Q  380 tattaatcaaccatgaa-taatcaaatttgtgattggaactagaattttaaaaactttgcattggtgtaactttgtaagcattgcatttgcaccttgatt 478  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7342059 tattaatcaaccatgaaataatcaaatttgtgattggaactagaattttaaaaactttgcattggtgtaactttgtaagcattgcatttgcaccttgatt 7341960  T
Q  479 --ctatatgaagtgagaaagaaagagagatgaggaagttaaagatgatacctgttgagccattactggacttgagggaatgatgatat 564  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7341959 atctatatgaagtgagaaagaaagagagatgaggaagttaaagatgatacctgttgagccattactggacttgagggaatgatgatat 7341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 4191736 - 4191663
Alignment:
Q  211 cttatgaaaacagtttgacttta-ttttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    ||||||||||||||||||||||| ||||||||||| || ||| ||  |||||||||||||||||||| ||||||    
T  4191736 cttatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 486073 - 485978
Alignment:
Q  216 gaaaacagtttgacttt-attttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||| ||||||||| |||||||||||| || ||| ||  || ||||||||||||||| | ||||||||| |||| |||||||| |||||||||    
T  486073 gaaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataagcgcttaattaa 485978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 320
Target Start/End: Complemental strand, 30024694 - 30024587
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||||| ||| ||||||||||||||||| || ||| ||   ||||| |||||| |||||| |||||| || || |||||||| |||||||||||      
T  30024694 tatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaacgcttctactataaacacttaattaagt 30024595  T
Q  313 tgtttatg 320  Q
    ||||||||    
T  30024594 tgtttatg 30024587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 19304918 - 19304816
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtt 316  Q
    |||||| |||||||||||  |||||||||||  || ||  ||||| |||||||||||||| ||| |||||||||||  ||||||| ||||||||  ||||    
T  19304918 aaaacaatttgactttatcatatcttttattaaagcaatagcttaaacataagcacttatatgagaagcgtttatagcataagcatttaattaagttgtt 19304819  T
Q  317 tat 319  Q
    |||    
T  19304818 tat 19304816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 24444032 - 24443938
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    ||||||||  |||||| |||||||||| |||| |||||| ||  ||||||||||||| |||||| ||||||| | |||| |||||||| ||||||    
T  24444032 tatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaat 24443938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 36734887 - 36734817
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||| ||||||||||||||||| ||||| || ||| ||| | |||||||||||||||||| ||||||    
T  36734887 tatgaaaatagtttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataa 36734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 969433 - 969494
Alignment:
Q  225 ttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcg 286  Q
    |||||||||||||| |||||||| ||| || |||||||| |||||||||||| |||||||||    
T  969433 ttgactttattttaccttttattatagaaattgcttatagataagcacttatatgataagcg 969494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 8703696 - 8703795
Alignment:
Q  213 tatgaaaacagtttga--ctttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||||||||||||  |||| ||||||| ||| ||  || ||  ||||||||||||||||| ||||||||||  |||||  |||||||||||||||||    
T  8703696 tatgaaaacagtttgatacttttttttatcctttgttagagaaatagcttatacataagcactcatctgataagtatttatgttataagcacttaattaa 8703795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 23676707 - 23676604
Alignment:
Q  217 aaaacagtttgactttattttatctttt-attgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgt 315  Q
    |||| |||| |||||||||||||||||| ||||||  ||  | ||||||| |||||||||| ||| |||| ||||  ||||||||||||| ||||| |||    
T  23676707 aaaatagttcgactttattttatctttttattgtataaatagattatacaaaagcacttatatgacaagcatttaagctataagcacttagttaaattgt 23676608  T
Q  316 ttat 319  Q
    ||||    
T  23676607 ttat 23676604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 54325113 - 54325184
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataag 284  Q
    |||||||||||||||||||||||||||||||| |  ||| ||  | ||||||| |||||||||| |||||||    
T  54325113 tatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataag 54325184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 22684592 - 22684698
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||||| ||||||||||||||| | ||| || ||| ||  ||||||||| ||||| |||| |||||||||  |||  |||||||| ||||||||      
T  22684592 tatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgataagcgcatatggtataagcaattaattaagt 22684691  T
Q  313 tgtttat 319  Q
    |||||||    
T  22684692 tgtttat 22684698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 54414899 - 54414837
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||||||||||||| ||||||||| |||||  |||| |||||||||||  |||||||    
T  54414899 gcttatacataagcacttatatgataagcgcttataacataaacacttaattaagttgtttat 54414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 33641053 - 33640996
Alignment:
Q  262 tacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||  |||||||    
T  33641053 tacaaaagcacttatatgataagcgattattctataagcacttaattaagctgtttat 33640996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 47970310 - 47970249
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||||| |||||||||| |||||||||||| || ||| ||  ||||||||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttat 47970249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 51044532 - 51044597
Alignment:
Q  211 cttatgaaaaca-gtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    |||||||||||| |||||||||||||||||||||| || ||| ||  |||||||||||| ||||||    
T  51044532 cttatgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 51555956 - 51556013
Alignment:
Q  226 tgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    ||||||||||||||||||| || || |||  |||||||||||||||||||| ||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 24160572 - 24160648
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgttta 290  Q
    ||||||| ||||||| ||||| ||||||||| || ||| ||  ||||||  |||||||||||| |||||||||||||    
T  24160572 atgaaaatagtttgaatttatattatcttttgttatagaaaaagcttatttataagcacttatatgataagcgttta 24160648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 9680658 - 9680595
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||| |||| |||||||||||||||||||||||| | | ||  ||||||||||||||| ||||    
T  9680658 tatgagaacaatttgactttattttatcttttattatcgaaatagcttatacataagcatttat 9680595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 23819154 - 23819123
Alignment:
Q  173 tgtccataagttgttttcatcttatttctata 204  Q
    ||||||||||||||||||||||||||||||||    
T  23819154 tgtccataagttgttttcatcttatttctata 23819123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 44319943 - 44319873
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataag 284  Q
    ||||||||||||| |||||||||||||||||| || ||| ||  | |||||||| ||||||||| |||||||    
T  44319943 tatgaaaacagttcgactttattttatctttt-ttatagaaatagtttatacatgagcacttatatgataag 44319873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 5219576 - 5219646
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||| ||||| |||||||||||||||||||| |||  |  || ||||||| ||||||||| ||||||    
T  5219576 tatgaaaatagtttaactttattttatcttttattatagagatagcatatacatgagcacttatatgataa 5219646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 24193579 - 24193493
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataag 299  Q
    |||||||| ||||| ||| | |||||| |||| |||||  ||   |||||||||||| |||||| |||||||||||||| |||||||    
T  24193579 tatgaaaatagtttaactctgttttatattttgttgtaaaaataacttatacataagtacttatatgataagcgtttatgctataag 24193493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 31038943 - 31038981
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtag 251  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  31038943 tatgaaaacaatttgactttattttatctattattgtag 31038981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 4243289 - 4243228
Alignment:
Q  259 ttatacataagcacttatctgataagcgtttatacta-taagcacttaattaaaatgtttat 319  Q
    ||||||| |||||||||| ||||||||| |||| ||| |||||||||||||||  |||||||    
T  4243289 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttat 4243228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 7731766 - 7731701
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||||||||||||||| |||||||||  ||||||||| ||| ||  ||||||||| || |||||||    
T  7731766 cttatgaaaacagtttaactttatttagtcttttattatagaaatagcttatacacaaacacttat 7731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 8422926 - 8423019
Alignment:
Q  226 tgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||||||||||||||||| || ||  ||  |||||||||||||||| ||| |||||   | |||| |||||| |||||||||||  |||||||    
T  8422926 tgactttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataaacacttaattaagttgtttat 8423019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 19422412 - 19422339
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcg 286  Q
    ||||||||  ||||||||||||| |||||||| || ||| ||   |||||||||||||| |||| |||||||||    
T  19422412 tatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcg 19422339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 36048456 - 36048415
Alignment:
Q  278 tgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||| ||||| |||||||||||||||||||||| ||||    
T  36048456 tgataagcatttatgctataagcacttaattaaaatgcttat 36048415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 6987820 - 6987880
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||||||||||||||| |||||||||||| | || |||  | ||||||||||| ||||||    
T  6987820 gaaaacagtttgactttgttttatcttttactataataatagtttatacataagtacttat 6987880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 19691401 - 19691349
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttataca 265  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||  |||||||||    
T  19691401 tatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19691349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 19701986 - 19701934
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttataca 265  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||  |||||||||    
T  19701986 tatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19701934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 20907164 - 20907104
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||||||||| ||||||||||||||||| || ||  ||  |||||||||||| |||||||    
T  20907164 gaaaacagtttcactttattttatcttttcttatacaaatagcttatacataaacacttat 20907104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 24929488 - 24929456
Alignment:
Q  212 ttatgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||| ||||||||||||||||||    
T  24929488 ttatgaaaacagttagactttattttatctttt 24929456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 25548649 - 25548717
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttatgaaagc 325  Q
    |||||| ||||||||||||| || |||| |||| | |||||| | |||||||||| ||||||| |||||    
T  25548649 gcttatgcataagcacttatgtggtaagtgtttctgctataatcccttaattaaattgtttatcaaagc 25548717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 32724113 - 32724037
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgttt 289  Q
    |||||||| ||||||||||||||||||||||| |  ||| ||  | ||| ||||||||||| || ||| ||||||||    
T  32724113 tatgaaaatagtttgactttattttatcttttgtaatagaaatagattagacataagcactgatatgagaagcgttt 32724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 44019504 - 44019444
Alignment:
Q  226 tgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcg 286  Q
    ||||||||||||||||||| || ||| ||  || ||||||||  |||||||||||||||||    
T  44019504 tgactttattttatcttttcttatagaaatagcctatacatacacacttatctgataagcg 44019444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 50396709 - 50396646
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    ||||||||||||||||||| ||| ||||| || | || ||||||  |||||||||||||||||||    
T  50396709 cttatgaaaacagtttgac-ttaatttatattatgttttagtaatagcttatacataagcactta 50396646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 41052885 - 41052778
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaa 311  Q
    ||||||||||||||| | ||||||| |||||||||| | | ||  |||||||||||||||| | |||||||||||||||| ||| |||||||||||||||    
T  41052885 ttatgaaaacagtttaagtttatttgatcttttattattgaaaaagcttatacataagcacctgtctgataagcgtttatgctacaagcacttaattaaa 41052786  T
Q  312 atgtttat 319  Q
     |||||||    
T  41052785 ttgtttat 41052778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 20982211 - 20982305
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    ||||||||| | |||||||||||||||| ||| || ||| ||  |||||||||||||||||||| ||||||||  |||| |||||||||||||||    
T  20982211 tatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaat 20982305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 26516275 - 26516186
Alignment:
Q  230 tttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||||||||||||| || ||| ||  |||||||||||||||||||| ||||||||| |||| |||||||| |||||||||  |||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttat 26516186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 214 - 320
Target Start/End: Original strand, 6738484 - 6738590
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaat 313  Q
    ||||||| | |||||||||||||| ||||||||| | | ||  ||||||||||||| |||||| ||||||| |||||| |||||| | ||||||||||      
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtgtttatgctataaactcttaattaaacg 6738583  T
Q  314 gtttatg 320  Q
    |||||||    
T  6738584 gtttatg 6738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 29115302 - 29115395
Alignment:
Q  226 tgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||||||||||| ||||| |||||| ||  |||||||||||||||||| | ||||||  |||||| |||||||| | |||||||| |||||||    
T  29115302 tgactttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataagcgcgtaattaaagtgtttat 29115395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 299
Target Start/End: Original strand, 37063150 - 37063236
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataag 299  Q
    |||||||| ||||||||||||||||||||||| || ||| ||  | ||||||||||||| |||| ||| |||| ||||| |||||||    
T  37063150 tatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataag 37063236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 16945076 - 16945155
Alignment:
Q  232 tattttatcttttattgtagtaagtgcttatacataagcacttat--ctgataagcgtttatactataagcacttaatta 309  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||   |||||||| ||||| |||||| ||||||||||    
T  16945076 tattttatcttttcttgtagaaatagcttatacataagcacttatacatgataagcttttatgctataaacacttaatta 16945155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 7096201 - 7096264
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactt 274  Q
    ||||||||||  |||||||||||||||||||||| || ||| ||  ||||||||||||||||||    
T  7096201 cttatgaaaatggtttgactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 9860874 - 9860972
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaa 311  Q
    ||||||||| |||||| |||||||| || ||| || ||| ||  ||||||||||||  |||||| ||| || | | |||||||||||||||||||||||    
T  9860874 tatgaaaacggtttgattttattttgtcatttgttctagaaatagcttatacataataacttatatgacaaccatatatactataagcacttaattaaa 9860972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 19177473 - 19177403
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    ||||||||||||| ||||| |||||||||| | |||||| ||  | |||||||||||||||||| ||||||    
T  19177473 tatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataa 19177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 32172635 - 32172551
Alignment:
Q  225 ttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaatta 309  Q
    ||||||| |||||||||||| |||||| ||  | |||||||||||| ||| | ||||||||| |||| || ||||| ||||||||    
T  32172635 ttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttatgctgtaagcgcttaatta 32172551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 35135738 - 35135810
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagc 285  Q
    |||||||| ||||||||||||||||||||||| || ||| ||   ||||||||||| ||||||| || |||||    
T  35135738 tatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatgttaagc 35135810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 318
Target Start/End: Original strand, 37611267 - 37611372
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||| ||||| || |||||  |||||||| ||| ||  |||| ||||||||||||||| ||| || | ||||| |||||||  |||||||||    
T  37611267 cttatgaaaacaatttgatttgatttt--cttttattatagaaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaattaa 37611364  T
Q  311 aatgttta 318  Q
    | ||||||    
T  37611365 attgttta 37611372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 318
Target Start/End: Original strand, 37787997 - 37788102
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||| ||||| || |||||  |||||||| ||| ||  |||| ||||||||||||||| ||| || | ||||| |||||||  |||||||||    
T  37787997 cttatgaaaacaatttgatttgatttt--cttttattatagaaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaattaa 37788094  T
Q  311 aatgttta 318  Q
    | ||||||    
T  37788095 attgttta 37788102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 39257472 - 39257568
Alignment:
Q  223 gtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||||||||| ||||| || |||  |  || ||||||||||||||||  ||||||  |||||| |||||||| |||||||||  |||||||    
T  39257472 gtttgactttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaagttgtttat 39257568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 244
Target Start/End: Complemental strand, 14295500 - 14295469
Alignment:
Q  213 tatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||||    
T  14295500 tatgaaaacagtttgactttattttatctttt 14295469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 244
Target Start/End: Original strand, 28586842 - 28586873
Alignment:
Q  213 tatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||||    
T  28586842 tatgaaaacagtttgactttattttatctttt 28586873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 6739858 - 6739760
Alignment:
Q  221 cagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||||||||||||||||  || ||| ||   ||||||||||| | ||||| |||||| || ||||  |||||||||||| || || |||||||    
T  6739858 cagtttgactttattttatctttatttatagaaatgacttatacataaacgcttatatgataaacgcttatgatataagcacttagttcaattgtttat 6739760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 29588856 - 29588778
Alignment:
Q  231 ttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaatta 309  Q
    ||||||||| |||| || ||| ||  |||||||||||||||||||| | | ||| |||||| |||||||| ||||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataagcacttatataaaaagtgtttatgctataagcgcttaatta 29588778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 246
Target Start/End: Original strand, 38831535 - 38831565
Alignment:
Q  216 gaaaacagtttgactttattttatcttttat 246  Q
    |||||||||||||||||||||||||||||||    
T  38831535 gaaaacagtttgactttattttatcttttat 38831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 41277426 - 41277456
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttt 243  Q
    |||||||||||||||||||||||||||||||    
T  41277426 tatgaaaacagtttgactttattttatcttt 41277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 583849 - 583878
Alignment:
Q  213 tatgaaaacagtttgactttattttatctt 242  Q
    ||||||||||||||||||||||||||||||    
T  583849 tatgaaaacagtttgactttattttatctt 583878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 244
Target Start/End: Complemental strand, 985625 - 985596
Alignment:
Q  215 tgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||    
T  985625 tgaaaacagtttgactttattttatctttt 985596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 2569822 - 2569883
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgttta 318  Q
    |||||||||||||||||||| ||||||  |||||   ||||||| |||||||||| ||||||    
T  2569822 gcttatacataagcacttatatgataaatgtttacggtataagcgcttaattaaattgttta 2569883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 17369354 - 17369309
Alignment:
Q  87 tgtttggattgacttatatgatcttatcaactgaaataatcacttg 132  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||||||    
T  17369354 tgtttggattgacttatttgaacttatctactgacataatcacttg 17369309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 32059665 - 32059694
Alignment:
Q  213 tatgaaaacagtttgactttattttatctt 242  Q
    ||||||||||||||||||||||||||||||    
T  32059665 tatgaaaacagtttgactttattttatctt 32059694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 11835268 - 11835192
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatc-tgataagcgtttat 291  Q
    ||||||| ||| ||||||||||||||||| || ||  ||  | |||||||||| |||||||| ||||||||||||||    
T  11835268 gaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttatcatgataagcgtttat 11835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 244
Target Start/End: Original strand, 29117009 - 29117037
Alignment:
Q  216 gaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||    
T  29117009 gaaaacagtttgactttattttatctttt 29117037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 31694508 - 31694440
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagc 285  Q
    ||||||||||||||||| ||||| |||| || |||  |  |||||| ||||||||||||| ||||||||    
T  31694508 aaaacagtttgactttagtttatgttttgttatagacatagcttattcataagcacttatatgataagc 31694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 33961652 - 33961600
Alignment:
Q  258 cttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||| || ||||||| ||||||| | ||||||||||| |||||||||||    
T  33961652 cttatacaaaaacacttatatgataagtgcttatactataaacacttaattaa 33961600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 35095864 - 35095932
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcg 286  Q
    ||||| ||||||||||||||||||||| || ||| ||  | ||| | |||||||||||| |||||||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcg 35095932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 1150 - 1256
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    ||||| || ||||||||||||||||||||||| || ||| ||  |||||||||||||||||||| |||||  ||||||| ||||||| ||||||||||      
T  1150 tatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagt 1249  T
Q  313 tgtttat 319  Q
    |||||||    
T  1250 tgtttat 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 2825 - 2719
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    ||||| || ||||||||||||||||||||||| || ||| ||  |||||||||||||||||||| |||||  ||||||| ||||||| ||||||||||      
T  2825 tatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaagt 2726  T
Q  313 tgtttat 319  Q
    |||||||    
T  2725 tgtttat 2719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 9027567 - 9027465
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtt 316  Q
    |||||||||||||||||||||||||| |||||||| ||  ||||||| |||||||||||| | ||||| ||| || |||||||| |||| ||||| ||||    
T  9027567 aaaacagtttgactttattttatcttctattgtagaaatagcttatagataagcacttatataataagtgttcatgctataagcgcttacttaaactgtt 9027468  T
Q  317 tat 319  Q
    |||    
T  9027467 tat 9027465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 2514687 - 2514610
Alignment:
Q  222 agtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataag 299  Q
    |||||||||||||||||||||||||| ||| ||  |||||||||||||||||||  |||||||| ||||| |||||||    
T  2514687 agtttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 33068639 - 33068734
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||||||||||  |||||||||||||| || ||| ||   |||||||||||||| |||| ||||||||| |||| |||||| |||||||||||    
T  33068639 tgaaaacagtttgatattattttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataaacacttaattaa 33068734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 3217266 - 3217360
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    |||||||| | ||||||||||||||||||| | ||  |  ||  |||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  3217266 tatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataatcgcttatactataagcacttaat 3217360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 18264323 - 18264231
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    |||||||||| |||||||||| |||||  ||| |||||  ||  ||  |||||||||||||||| |||||| ||||||||||||| |||||||||    
T  18264323 tatgaaaacaatttgactttactttat--tttgttgtaaaaatagcacatacataagcacttatatgataaacgtttatactatacgcacttaat 18264231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 32386179 - 32386270
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaatt 308  Q
    |||||||||| ||||||||||||||||| |    | ||  |||||||||||||||||||| |||||| | |||||||||||||  |||||||    
T  32386179 aaaacagttttactttattttatcttttctaagtgaaatagcttatacataagcacttatatgataaacttttatactataagtgcttaatt 32386270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 33828596 - 33828534
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||| ||||| |||||||  |||||||||||||| ||||||||||||| ||||| |||||||    
T  33828596 gcttacacatatgcacttaaatgataagcgtttatgctataagcacttagttaaactgtttat 33828534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 10154215 - 10154146
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgata 282  Q
    ||||||||||||||||||||||||||||||||  | ||| ||  |||| |||| |||||||||| |||||    
T  10154215 tatgaaaacagtttgactttattttatctttttctatagaaacagcttgtacagaagcacttatatgata 10154146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 31964669 - 31964710
Alignment:
Q  211 cttatgaaaacagttt-gactttattttatcttttattgtag 251  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  31964669 cttatgaaaacagttttgactttattttatcttttattgtag 31964710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 32975967 - 32975866
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgttt 317  Q
    |||||||||||||||||||||| |||| ||  || ||   ||||||||||| ||||||| ||| ||||| |||| |||||| | |||||||||  |||||    
T  32975967 aaacagtttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaagttgttt 32975868  T
Q  318 at 319  Q
    ||    
T  32975867 at 32975866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 323805 - 323733
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagc 285  Q
    |||||||||||||||| |||||||||||||||| | ||| ||  ||||||||| || ||||||| | ||||||    
T  323805 tatgaaaacagtttgaatttattttatcttttaatatagaaatagcttatacaaaaccacttatgttataagc 323733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 31461651 - 31461575
Alignment:
Q  234 ttttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||||||| || ||| ||  ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttatacaataagtgcttataatataagcacttaattaa 31461575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 9732469 - 9732382
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagca 301  Q
    ||||||||| |||||||| |||||||| |||| | ||| ||  |||||| ||||||||||||| || |||  |||||| |||||||||    
T  9732469 atgaaaacaatttgacttaattttatcctttaatatagaaatagcttatgcataagcacttatatggtaaatgtttatgctataagca 9732382  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 29274305 - 29274376
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataag 284  Q
    |||||||||| |||||||||||||||||||||  | ||| ||  ||||||||||||||| || | |||||||    
T  29274305 tatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataag 29274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 3204618 - 3204652
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttatt 247  Q
    ||||||||||||| |||||||||||||||||||||    
T  3204618 tatgaaaacagttcgactttattttatcttttatt 3204652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 7351684 - 7351769
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataa 298  Q
    |||||||||||||| ||||||||||||  |||||| ||  ||  | ||||||||||||| |||| ||||||| | |||| ||||||    
T  7351684 tatgaaaacagtttaactttattttatagtttattatataaatagtttatacataagcatttatatgataagagcttatgctataa 7351769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 8349744 - 8349837
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||| ||| ||||||||||||||||| ||  || ||  | ||||||| || ||||||| ||||||| | |||| |||||||| |||||||||    
T  8349744 aaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataagcgcttaattaa 8349837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 8420280 - 8420345
Alignment:
Q  220 acagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagc 285  Q
    ||||||||||||||||||||| ||||||  || ||   ||| ||||||||||||||| ||||||||    
T  8420280 acagtttgactttattttatcatttattaaagaaataacttgtacataagcacttatatgataagc 8420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 10452436 - 10452505
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgata 282  Q
    |||||||| ||||||| |||||||||| |||| || ||| ||  ||||||||||||||||| || |||||    
T  10452436 tatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatgata 10452505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 31672542 - 31672575
Alignment:
Q  211 cttatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||| ||||    
T  31672542 cttatgaaaacagtttgactttattttatttttt 31672575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 20671944 - 20672004
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||||| |||||||||||||||||||||  | ||| ||  |||||||||||| |||||||    
T  20671944 gaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttat 20672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 27727165 - 27727237
Alignment:
Q  229 ctttattttatcttttattgtagtaagtg-cttatacataagcacttatctgataagcgtttatactataagc 300  Q
    ||||||||||||||| ||| ||| || |  ||| || |||||||||||| ||||||| |||||||||||||||    
T  27727165 ctttattttatctttaattatagaaaataacttgtatataagcacttatatgataagtgtttatactataagc 27727237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 29940789 - 29940729
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactt 274  Q
    |||||||||  |||||||||||||||||||| || ||| ||  |||||||| |||||||||    
T  29940789 atgaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaagcactt 29940729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 31968091 - 31968131
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtag 251  Q
    |||||||||| |||||||||||||||||| || ||||||||    
T  31968091 cttatgaaaatagtttgactttattttattttctattgtag 31968131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 9e-19; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 28803582 - 28803690
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    ||||||| |||||||||||||||||||||||| || | | ||   |||||| |||||||||||| |||||||| ||||| | |||| ||||||||||||     
T  28803582 tatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataaacacttaattaaac 28803681  T
Q  313 tgtttatga 321  Q
    |||||||||    
T  28803682 tgtttatga 28803690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 36852452 - 36852366
Alignment:
Q  220 acagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaa 306  Q
    ||||||||||||||||||||||| || |  || ||  ||||||||||||||||||||||| ||||||||||| ||| || |||||||    
T  36852452 acagtttgactttattttatcttctaatagagaaatagcttatacataagcacttatctggtaagcgtttatgctacaaacacttaa 36852366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 4550771 - 4550685
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataag 299  Q
    ||||||||||| ||||| ||||||||||||||||| | | ||   ||||||||||||||||||| ||||||| | |||| |||||||    
T  4550771 tatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataagagattatgctataag 4550685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 10143162 - 10143064
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgt 315  Q
    ||||||||||||||| |||||||||||| || ||| ||   |||||||||||||||||||  ||||||  ||| | || ||||||||||||||| ||||    
T  10143162 aaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttattcgataagtttttgtgctgtaagcacttaattaagatgt 10143064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 319
Target Start/End: Original strand, 32098382 - 32098493
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcact---tatctgataagcgtttatactataagcacttaat 307  Q
    |||||||||||| ||||||||||||||||||||| || ||| ||  ||||||| ||||||| |   ||| ||||||  |||||| ||||||||||||||     
T  32098382 cttatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataagcatttagtatatgataactgtttatgctataagcacttaag 32098481  T
Q  308 taaaatgtttat 319  Q
    |||  |||||||    
T  32098482 taagttgtttat 32098493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 33192187 - 33192090
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||||||||||||||||||||| | || ||| ||  | || || |||||||||| | ||||||| |||||| || ||||| |||||||||    
T  33192187 tatgaaaacagtttgactttattttatcttatgttatagaaatagtttttatataagcacttgtgtgataagagtttatgctttaagcgcttaattaa 33192090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 17952777 - 17952848
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataag 284  Q
    |||||||| ||||||||||||||||||||||| || ||| ||  ||||||| |||||| ||||| |||||||    
T  17952777 tatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataag 17952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 33197327 - 33197393
Alignment:
Q  225 ttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttat 291  Q
    ||||||||||| |||||||| || ||| ||  ||||||| |||||||||||| ||||||||||||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttat 33197393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 34054977 - 34055075
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta-----tctgataagcgtttatactataagcacttaa 306  Q
    |||| |||||||||| |||||||||||||||| || ||| ||  || ||||||||||||||||     | |||||| ||||||| ||||||||||||||    
T  34054977 tatgtaaacagtttgcctttattttatcttttgttatagaaatagcctatacataagcacttatgaattatgataaccgtttatgctataagcacttaa 34055075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 11513892 - 11513824
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataag 284  Q
    |||||||||| ||||||||||||||||||||| ||||| |||   ||||||||||| | ||||| |||||||    
T  11513892 tatgaaaacaatttgactttattttatcttttgttgtaataa---cttatacataaacccttatatgataag 11513824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 22878250 - 22878194
Alignment:
Q  86 atgtttggattgacttatatgatcttatcaactgaaataatcacttgcgagactgtt 142  Q
    |||||||||||||||||| ||| |||||| ||||| |||| |||||| |||||||||    
T  22878250 atgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtt 22878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 25609778 - 25609727
Alignment:
Q  225 ttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||||||||||||||||||| || ||| ||  ||||||||||||||||||||    
T  25609778 ttgactttattttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 31461421 - 31461326
Alignment:
Q  224 tttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||||||||||||||||||| || ||| ||  ||||||| |||| ||||||| |||||  ||||||| ||| |||  |||||||||  |||||||    
T  31461421 tttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaagttgtttat 31461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 44589984 - 44589941
Alignment:
Q  258 cttatacataagcacttatc-tgataagcgtttatactataagc 300  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  44589984 cttatacataagcacttatcatgataagcgcttatactataagc 44589941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 5043636 - 5043666
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttt 243  Q
    |||||||||||||||||||||||||||||||    
T  5043636 tatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 6926518 - 6926612
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||| |||||||| |||||||||||| |||||  ||   ||||||||||| || |||| |||||||||  ||||||||||||| || |||||    
T  6926518 tatgaaaacaatttgactt-attttatcttttcttgtacaaatgacttatacataaacatttatatgataagcg--tatactataagcaattgattaa 6926612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 7283076 - 7282950
Alignment:
Q  158 aaacaagttataatgtgtccataagttgttttcatcttatttctatagactctc---------ttatgaaaacagtttgactttattttatcttttattg 248  Q
    |||||| |||| || ||||||||||||||||||||||||| || |||  |||||         |||||||||||||||||||| ||||| |||||| ||     
T  7283076 aaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacagtttgacttcattttttcttttctta 7282977  T
Q  249 tagtaagtgcttatacataagcactta 275  Q
    ||  ||  |||||||||||| ||||||    
T  7282976 taaaaatagcttatacataaacactta 7282950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 14209271 - 14209193
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttat 291  Q
    |||||||||||||||| ||||||||||||||| || | | ||  ||||| ||| || ||||||| |||||| |||||||    
T  14209271 tatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataaacgtttat 14209193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 18962114 - 18962176
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    |||||||||||||| ||||||||||||||||| || ||  ||  ||| |||||||||||||||    
T  18962114 tatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 25790120 - 25790037
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataa 298  Q
    ||||||||||||||||||| | |||||||||| || ||| ||    ||||||||||  |||||| ||||||||| |||||||||||    
T  25790120 tatgaaaacagtttgacttcactttatctttttttatagaaatatattatacataa--acttatatgataagcgcttatactataa 25790037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 27288622 - 27288564
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||||||||| |||||||||||||||||| ||| ||   ||| |||||||||||||||    
T  27288622 aaacagtttgattttattttatcttttattatagaaacaacttttacataagcacttat 27288564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 244
Target Start/End: Complemental strand, 33942143 - 33942113
Alignment:
Q  214 atgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||||    
T  33942143 atgaaaacagtttgactttattttatctttt 33942113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 43808526 - 43808472
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaa 311  Q
    |||||||||||| ||||||| ||||| ||| |||| |||||| ||||||||||||    
T  43808526 gcttatacataaacacttatatgatacgcgcttatgctataaacacttaattaaa 43808472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 13189507 - 13189560
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||||| |||||||||  ||||||| ||| ||||||||| |||||||||||    
T  13189507 gcttatacaaaagcacttacatgataagtgttaatactataaccacttaattaa 13189560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 244
Target Start/End: Original strand, 29429835 - 29429864
Alignment:
Q  215 tgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||    
T  29429835 tgaaaacagtttgactttattttatctttt 29429864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 41950015 - 41949966
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaa 306  Q
    |||| ||||||||||||||| |||||| | ||||| ||||||||||||||    
T  41950015 gcttctacataagcacttatatgataaacatttatcctataagcacttaa 41949966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 33256734 - 33256706
Alignment:
Q  213 tatgaaaacagtttgactttattttatct 241  Q
    |||||||||||||||||||||||||||||    
T  33256734 tatgaaaacagtttgactttattttatct 33256706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 37844847 - 37844895
Alignment:
Q  258 cttatacataagcacttatctgataagcgtttatactataagcacttaa 306  Q
    |||||| |||| ||||||| |||||||| ||||| ||||||||||||||    
T  37844847 cttatagataaacacttatatgataagcttttatgctataagcacttaa 37844895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 20672768 - 20672669
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||| |||||||||||||||||||||||||||| || ||  ||| || || |||||||||||||| |||||||| ||| |||||||| | |||||||||    
T  20672768 cttataaaaacagtttgactttattttatcttttgttatataaagggcatacacataagcacttatatgataagcttttctactataaactcttaattaa 20672669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 14482192 - 14482090
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtt 316  Q
    |||||| ||||||||||||||||||||| || ||| ||  | |||||||||||||||||| ||||||||  | || ||||||| ||||||||||| ||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaaattgtt 14482093  T
Q  317 tat 319  Q
    |||    
T  14482092 tat 14482090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 10079142 - 10079245
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgt 315  Q
    |||||||||||||||| ||||||||||||||  ||| ||  || |||| |||||||  ||| ||| |||| |||||| ||||||||||| |||||| |||    
T  10079142 gaaaacagtttgacttcattttatcttttatcatagaaatagcctataaataagcatgtatatgaaaagcatttataatataagcacttgattaaactgt 10079241  T
Q  316 ttat 319  Q
    ||||    
T  10079242 ttat 10079245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 27320300 - 27320206
Alignment:
Q  222 agtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgttt 317  Q
    ||||||||||||||| |||||||  | ||| ||  |||||||| ||||||||||| ||||||| |||||| |||||||| |||||||||| |||||    
T  27320300 agtttgactttattt-atcttttgctataggaatagcttatacgtaagcacttatgtgataagtgtttatgctataagcgcttaattaaattgttt 27320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 4558792 - 4558686
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||| | ||| |||||||||||||||||||| ||| ||  |||||||||||| ||||||  | |||| ||||||| |||||||| | |||||||      
T  4558792 tatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaagt 4558693  T
Q  313 tgtttat 319  Q
    |||||||    
T  4558692 tgtttat 4558686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 27754556 - 27754606
Alignment:
Q  260 tatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  27754556 tatacataagcacttaaatgataagcgtttatactataaacacttaattaa 27754606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 35453699 - 35453805
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||  ||||| ||||||||||||||||| |||||| ||  | ||||| ||||| |||||| ||| ||||| |||| |||||| |||||||||||      
T  35453699 tatgaaactagtttaactttattttatcttttgttgtagaaacagattatatataagtacttatatgacaagcgcttatgctataatcacttaattaagt 35453798  T
Q  313 tgtttat 319  Q
    |||||||    
T  35453799 tgtttat 35453805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 35534941 - 35535007
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||||||||||||||||| |||||||| ||| ||  ||||||| |||||||||||| ||||||    
T  35534941 aaaacagtttgactttattttaacttttattatagaaatagcttatatataagcacttatatgataa 35535007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 35869831 - 35869737
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    ||||||||  |||||| |||||||||| |||| |||||| ||  ||||||||||||| |||||| ||||||| | |||| |||||||| ||||||    
T  35869831 tatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaat 35869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 308
Target Start/End: Original strand, 40280279 - 40280376
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaatt 308  Q
    |||||||||||| ||| ||||||||||||||||| |||||| ||   |||||| ||| |||||||| ||||||||| |  | |||||||| |||||||    
T  40280279 cttatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatgataagcgctattgctataagcgcttaatt 40280376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 43208253 - 43208315
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||||||||||  |||||| |||| | ||||||||||||||||||||||||||  |||||||    
T  43208253 gcttatacataaatacttatatgatgaacgtttatactataagcacttaattaagttgtttat 43208315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 14929190 - 14929255
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||||||||||||||||||| |||||| ||||||||| ||| ||  |||||| | |||||||||||    
T  14929190 cttatgaaaacagtttgactctattttgtcttttattatagaaatagcttatgcgtaagcacttat 14929255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 29699247 - 29699155
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaa 306  Q
    |||| |||| ||||||||||||||||||||| || ||| ||   ||| |||||||||| |||| ||||||   ||||| ||||||||||||||    
T  29699247 atgacaacattttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataagcacttaa 29699155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 4271875 - 4271836
Alignment:
Q  279 gataagcgtttatactataagcacttaattaaaatgttta 318  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  4271875 gataagcatttatactataagcacttaattaaactgttta 4271836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 247
Target Start/End: Original strand, 6918258 - 6918289
Alignment:
Q  216 gaaaacagtttgactttattttatcttttatt 247  Q
    ||||||||||||||||||||||||||||||||    
T  6918258 gaaaacagtttgactttattttatcttttatt 6918289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 6950271 - 6950224
Alignment:
Q  272 cttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||| |||||||||||||| ||||||||||||||||||  |||||||    
T  6950271 cttatatgataagcgtttatgctataagcacttaattaagttgtttat 6950224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 34563245 - 34563138
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaa 311  Q
    |||||||||  |||||||||||||||||| ||| |  ||| ||   |||||| |||||||||||| ||||||  |||||| ||||||||  ||||||||     
T  34563245 ttatgaaaattgtttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcgtttaattaag 34563146  T
Q  312 atgtttat 319  Q
     |||||||    
T  34563145 ttgtttat 34563138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 40357894 - 40357815
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttat 291  Q
    ||||||||| | ||| ||||||||||||||||| || ||  ||| ||||||||||||  |||||| |||||||| |||||    
T  40357894 ttatgaaaataattttactttattttatcttttgttatatcaagagcttatacataaatacttatatgataagcatttat 40357815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 39392744 - 39392822
Alignment:
Q  220 acagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataa 298  Q
    ||||||||||||||||||||||||| || ||| ||  | |||||||||  ||||||| ||||||||  |||| ||||||    
T  39392744 acagtttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataa 39392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 40356854 - 40356788
Alignment:
Q  224 tttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgttta 290  Q
    |||||||||||||||||||||||| ||  ||  ||||||| |||||||||||| ||| ||| |||||    
T  40356854 tttgactttattttatcttttattatataaatagcttatagataagcacttatatgacaagtgttta 40356788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 41336721 - 41336827
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||||| ||||||| ||||||||||||| |  ||  ||    ||||||||||||| |||| |||||| || |||| ||||||||| ||||||||      
T  41336721 tatgaaaacaatttgactatattttatcttttgtcataaaaatgatttatacataagcatttatttgataaacgcttatgctataagcaattaattaagt 41336820  T
Q  313 tgtttat 319  Q
    |||||||    
T  41336821 tgtttat 41336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 42597394 - 42597332
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||||||| ||| ||||||||||||||||| || ||| ||  ||||||||||||| ||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttat 42597332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 43907873 - 43907907
Alignment:
Q  211 cttatgaaaacagtttgactttattttatctttta 245  Q
    |||||||||||| ||||||||||||||||||||||    
T  43907873 cttatgaaaacaatttgactttattttatctttta 43907907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 1112251 - 1112218
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttat 246  Q
    |||||||||||||||||||||||| |||||||||    
T  1112251 tatgaaaacagtttgactttatttgatcttttat 1112218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 12972806 - 12972753
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||||||||||| ||||||  | |||| |||||||| |||||||||    
T  12972806 gcttatacataagcacttatatgataaatgcttatgctataagcgcttaattaa 12972753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 14949884 - 14949812
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagt-gcttatacataagcacttatctgataa 283  Q
    |||||||||| ||||||||| ||||||||||||| || ||| |||| ||||||||||||| |||| | ||||||    
T  14949884 cttatgaaaagagtttgactctattttatcttttgttatag-aagtagcttatacataagaacttgtatgataa 14949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 26215487 - 26215426
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatc 277  Q
    ||||| ||||| ||||||||||||||||| || ||| ||  |||||||||||||| ||||||    
T  26215487 gaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttatc 26215426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 34290841 - 34290800
Alignment:
Q  278 tgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||| |||| | ||||||||||||||||||||||||||    
T  34290841 tgataagcatttacattataagcacttaattaaaatgtttat 34290800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 36643945 - 36644030
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactat 296  Q
    |||||||||| |||||||||||| | ||||||||||| ||| ||  |||||||||||   || ||| | ||||||| |||||||||    
T  36643945 cttatgaaaatagtttgactttactgtatcttttattatagaaatagcttatacatagatacgtatattataagcgcttatactat 36644030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 37444494 - 37444555
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatc 277  Q
    ||||||| ||| |||||| |||||||||| || ||||||  |||||||||||||| ||||||    
T  37444494 gaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttatc 37444555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 12496627 - 12496575
Alignment:
Q  258 cttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||| | |||||| ||||||||||| || |||||| |||||||||||    
T  12496627 cttatacatacgtacttatatgataagcgttaatgctataaacacttaattaa 12496575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 40728498 - 40728566
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagc 285  Q
    |||||||||||||||||||||||||||| || ||| ||   ||||| ||| | ||||||| ||||||||    
T  40728498 aaaacagtttgactttattttatcttttgttatagaaataacttatgcatgaacacttatatgataagc 40728566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 9527166 - 9527260
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    ||||||||||||||||||||||| |||||||| || |||  |  || |||| |||||||||| | ||||||| |||||||||||| |||||||||    
T  9527166 tatgaaaacagtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataagtgtttatactataggcacttaat 9527260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 7244698 - 7244626
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||||||||||||||||| |||||||||||  | ||| ||  |||||||||||||||||||| ||||||    
T  7244698 cttatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 3610820 - 3610894
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttat 291  Q
    ||||||||||| ||| |||||||||||| |||||| ||  |||||||||||||||||||| ||| ||| ||||||    
T  3610820 aaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagcacttatatgacaagtgtttat 3610894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 30134040 - 30133950
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaatt 308  Q
    |||||||  |||||||||||||||||||| |||||  ||  |||||||||||| ||||||  ||||||||| |||| ||||||||| ||||||    
T  30134040 gaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacactta--tgataagcgcttatgctataagcatttaatt 30133950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 45593795 - 45593891
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||||||||||||||||||||||||| |||| ||  || ||  ||||||||||||||| |||| |||||| |  ||| || ||||||||||||||||    
T  45593795 tatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataaactcttacac-ataagcacttaattaa 45593891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 5006585 - 5006639
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacata 267  Q
    |||||||||||||||||||||||||||||||| || ||| ||  |||||||||||    
T  5006585 tatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 12835013 - 12835107
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaat 307  Q
    |||||||||| ||||||||||||||||||||| |||||| ||  || | | |||||||||| ||  | |||||||||||  ||||||| ||||||    
T  12835013 tatgaaaacaatttgactttattttatcttttgttgtagaaatagcatctgcataagcactcatacgctaagcgtttatgttataagcgcttaat 12835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 25659958 - 25660063
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||||||||| ||||| ||||||||||| || | | |||   |||||||||||||||||| ||||||  |||||||||||||    |||||||||     
T  25659958 tatgaaaacagtttcactttgttttatcttttgttat-gaaagattttatacataagcacttatgtgataattgtttatactataaatgtttaattaaac 25660056  T
Q  313 tgtttat 319  Q
    |||||||    
T  25660057 tgtttat 25660063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 27121662 - 27121740
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttat 291  Q
    |||||||||| ||||||||||||||||| |||||| ||| ||   |||||||||||| | |||| ||||||||| ||||    
T  27121662 tatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataaggaattatatgataagcgcttat 27121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 27481370 - 27481476
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||| ||||||||||||||  ||||||| ||| || ||| ||  |||||||||||| ||||||| | |||| | ||||| |||||||||| |||||||      
T  27481370 tatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatacataaacacttatataataaacatttatgctataagcacctaattaagt 27481469  T
Q  313 tgtttat 319  Q
    |||||||    
T  27481470 tgtttat 27481476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 31341180 - 31341082
Alignment:
Q  221 cagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||||||||||||||||| || ||  ||  ||||||||||||||| |||  ||||||||| |||| | |||||| ||| |||||  |||||||    
T  31341180 cagtttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttgattaagttgtttat 31341082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 33894616 - 33894555
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    ||||||||||||||||||| |||||||||||| || ||| ||  |||||||||||||||||||    
T  33894616 tatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 49060523 - 49060437
Alignment:
Q  224 tttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||||||| |||| || ||| ||  ||||||||||||  |||||| ||||||||  ||||||||||||  |||||||||    
T  49060523 tttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataagccattatactataagtgcttaattaa 49060437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 35536101 - 35536028
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcg 286  Q
    |||||||||| ||||||||||||||||||| | || ||| ||  ||||||||||||||  |||| |||||||||    
T  35536101 tatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataagcg 35536028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 47004077 - 47003984
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||| |||||||||||||||||||| || || ||| ||  ||||| | |||| ||||||| |||||| | ||| | ||||||||||||||||||    
T  47004077 aaaatagtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataaacatttttgctataagcacttaattaa 47003984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 3241438 - 3241366
Alignment:
Q  210 tcttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgata 282  Q
    |||||||||||||||||||||||||||| | |||| || ||| ||  |||| || |||||||||||| |||||    
T  3241438 tcttatgaaaacagtttgactttattttttattttgttatagaaatagcttctatataagcacttatatgata 3241366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 30160965 - 30160997
Alignment:
Q  212 ttatgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||||||    
T  30160965 ttatgaaaacagtttgactttattttatctttt 30160997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 33601167 - 33601207
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtag 251  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  33601167 cttatgaaaacagtttgactttattttattttttagtgtag 33601207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 28165081 - 28165023
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    |||||| |||||||| |||||||||||| || ||| |||  ||||||||||||||||||    
T  28165081 aaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 31338498 - 31338468
Alignment:
Q  217 aaaacagtttgactttattttatcttttatt 247  Q
    |||||||||||||||||||||||||||||||    
T  31338498 aaaacagtttgactttattttatcttttatt 31338468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 22388001 - 22388086
Alignment:
Q  234 ttttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    ||||||||||| || ||| ||  |||||| ||||||||||||  ||||||| ||||||  ||||||| |||||||||  |||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataagcgcttaattaagttgtttat 22388086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 29363512 - 29363483
Alignment:
Q  213 tatgaaaacagtttgactttattttatctt 242  Q
    ||||||||||||||||||||||||||||||    
T  29363512 tatgaaaacagtttgactttattttatctt 29363483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 5276216 - 5276156
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    ||||||| |||||||||||| ||||||||| || ||  ||  |||||||||||||||||||    
T  5276216 tgaaaacggtttgactttatgttatcttttgttataaaaatagcttatacataagcactta 5276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 24973938 - 24973870
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgat 281  Q
    |||| ||||| ||||| ||||||||||||||| || ||| ||  |||| ||||||||||||||| ||||    
T  24973938 tatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 28844435 - 28844383
Alignment:
Q  258 cttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||||||||||   ||||||| |||| |||||| |||||||||||    
T  28844435 cttatacataagcacttatacaataagcgcttatgctataaacacttaattaa 28844383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 39630569 - 39630509
Alignment:
Q  259 ttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||||||||||  ||||||| | ||  |||||||||||||||||||  |||||||    
T  39630569 ttatacataagcacttaagtgataagggcttgcactataagcacttaattaagttgtttat 39630509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 44239055 - 44239087
Alignment:
Q  212 ttatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||| |||||||||||||||||||||    
T  44239055 ttatgaaaacattttgactttattttatctttt 44239087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 47616704 - 47616736
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttt 243  Q
    ||||||||||||||||||||||||| |||||||    
T  47616704 cttatgaaaacagtttgactttattctatcttt 47616736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 38462275 - 38462169
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    ||||||||||||||||||||||||||||||||  | ||| ||  ||||||| |||| ||||||| ||||||| |||||| || || || |||||||||      
T  38462275 tatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataagtgtttatgctttaggcgcttaattaact 38462176  T
Q  313 tgtttat 319  Q
    |||||||    
T  38462175 tgtttat 38462169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 41028929 - 41029013
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataag 299  Q
    ||||||||| ||||||||||||| |||||| || ||| ||  |||||||||||||||||||| |||||||| ||||  |||||||    
T  41028929 tgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataag 41029013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 20504202 - 20504100
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagt-gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgt 315  Q
    |||||||||||||||  ||||||| ||| || ||| |||| |||||  ||||||||||||  |||||||| |||||||||||||| |||||||||  |||    
T  20504202 aaaacagtttgacttatttttatcatttgttatag-aagtagcttaggcataagcacttaaatgataagcctttatactataagcgcttaattaagctgt 20504104  T
Q  316 ttat 319  Q
    ||||    
T  20504103 ttat 20504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 20192682 - 20192744
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    ||||||||| |||||||||||||||||||||| || ||  ||  |||||||||||||||||||    
T  20192682 tatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 320
Target Start/End: Complemental strand, 23785249 - 23785140
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagc--acttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||| ||||||||||||||||||||||| |  ||||| ||   ||||| |||||||  | |||| |||||| | ||||| ||||||||||||||||||    
T  23785249 tatgaatacagtttgactttattttatcttctgctgtagaaataacttatgcataagcatatttatatgataaacatttatgctataagcacttaattaa 23785150  T
Q  311 aatgtttatg 320  Q
      ||||||||    
T  23785149 gttgtttatg 23785140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 27792866 - 27792796
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||| |||||||| |||||||||||||| || | | ||  |||||||||||||||||||| ||||||    
T  27792866 tatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatgataa 27792796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 39971315 - 39971210
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtg-cttatacataagcacttatctgataagcgtttatactataagcacttaatta 309  Q
    ||||| |||||| |||| |||||||||||||||| || || |||||  ||||||||||||||||||| ||||||| ||| ||  ||||||  ||||||||    
T  39971315 cttattaaaacaatttggctttattttatcttttgttata-taagtaacttatacataagcacttatatgataagtgttgatgttataagagcttaatta 39971217  T
Q  310 aaatgtt 316  Q
    || ||||    
T  39971216 aattgtt 39971210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 21574438 - 21574389
Alignment:
Q  261 atacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||| ||||||  ||| |||||||||||||||||||||||||||||    
T  21574438 atacataaacacttacatgagaagcgtttatactataagcacttaattaa 21574389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 40122827 - 40122884
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataag 269  Q
    ||||||||||||||||||||||||||||||||| || | | ||  |||||||||||||    
T  40122827 ttatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 51278234 - 51278339
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaat 313  Q
    ||||||||||||||||||||||| || |||| || ||| ||  |||||||||| |||| |||| ||||||  | ||||| ||||| |  ||||||||| |    
T  51278234 atgaaaacagtttgactttatttaatattttgttatagaaatagcttatacattagcaattatatgataaatgcttatattataaacgtttaattaaact 51278333  T
Q  314 gtttat 319  Q
    ||||||    
T  51278334 gtttat 51278339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 12923404 - 12923464
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||| |||||||||||||||||||||||||||  || ||  ||||||||| ||||||||||    
T  12923404 gaaagcagtttgactttattttatcttttattacagcaatagcttatacacaagcacttat 12923464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 21872213 - 21872269
Alignment:
Q  86 atgtttggattgacttatatgatcttatcaactgaaataatcacttgcgagactgtt 142  Q
    ||||||||||| |||||| |||||||||| ||||| |||| |||||| |||||||||    
T  21872213 atgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtt 21872269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 44284132 - 44284204
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||||||||||||||||| |||||| |||| || ||| ||  |||||||||| || |||||| ||||||    
T  44284132 cttatgaaaacagtttgactttgttttattttttgttatagaaatagcttatacattagtacttatatgataa 44284204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 22232820 - 22232749
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataag 284  Q
    |||||||||||||||||||||||||||| ||| || ||  ||  |||||||||| |||| |||| |||||||    
T  22232820 tatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttatatgataag 22232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 36101559 - 36101476
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataag 299  Q
    |||| |||||||||||||||||||||| ||||  || ||  |||||| ||||| ||||||| |||||||| | ||| |||||||    
T  36101559 gaaatcagtttgactttattttatcttatattacagaaatagcttattcataaccacttatttgataagcatgtatgctataag 36101476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 36646387 - 36646426
Alignment:
Q  173 tgtccataagttgttttcatcttatttctatagactctct 212  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  36646387 tgtccataagctgttttcatcttatttctataaactctct 36646426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 244
Target Start/End: Original strand, 49586992 - 49587023
Alignment:
Q  213 tatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||||    
T  49586992 tatgaaaacagtttgactttattttatctttt 49587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 1816573 - 1816543
Alignment:
Q  217 aaaacagtttgactttattttatcttttatt 247  Q
    |||||||||||||||||||||||||||||||    
T  1816573 aaaacagtttgactttattttatcttttatt 1816543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 28289241 - 28289303
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||| ||||||||  ||||||| |||||| ||| || |||||||||||| |||||||    
T  28289241 gcttatacatgagcacttagatgataagtgtttatgctaaaaacacttaattaaactgtttat 28289303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 32555068 - 32555110
Alignment:
Q  224 tttgactttattttatcttttattgtagtaagtgcttatacat 266  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||    
T  32555068 tttgactttattttatcttttgttgtaataattgcttatacat 32555110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 32703132 - 32703062
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||||| ||||| |||||||||||||||||  ||| ||  |||||||||||| || |||| ||||||    
T  32703132 tatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataa 32703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 1395665 - 1395604
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactt 274  Q
    |||||||| | ||||||||||||||||||||| || ||| ||  ||||||||||| ||||||    
T  1395665 tatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 8007771 - 8007828
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagc 270  Q
    ||||| ||||||||||||||| |||||||||| || ||| ||  ||||||||||||||    
T  8007771 tatgataacagtttgactttactttatcttttgttatagaaacagcttatacataagc 8007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 29094331 - 29094278
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||||||| ||||||| ||||||| |||||| ||||||||  ||||||||    
T  29094331 gcttatacataaacacttatatgataagtgtttatgctataagcgtttaattaa 29094278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 41159091 - 41159026
Alignment:
Q  225 ttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgttta 290  Q
    |||||||||||||||||||  || ||| ||   |||||||||||||||||||  ||||||||||||    
T  41159091 ttgactttattttatctttagttataggaataacttatacataagcacttatacgataagcgttta 41159026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 16790430 - 16790502
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||||| | ||||| |||||||||||| || || ||  ||  |||||||||||||||||||| ||||||    
T  16790430 cttatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 28842977 - 28843033
Alignment:
Q  257 gcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaat 313  Q
    |||||||||||||||||||| ||||||||| ||||  ||||||  ||||||| ||||    
T  28842977 gcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaat 28843033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 52450130 - 52450198
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    ||||||| |||||||||||||| ||||||| || ||| || ||||||| |||||| |||| | ||||||    
T  52450130 tgaaaactgtttgactttatttcatcttttgttatagaaattgcttatgcataagtacttgtatgataa 52450198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 53457372 - 53457340
Alignment:
Q  212 ttatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||| |||||||||||||||||||||||    
T  53457372 ttatgaaaatagtttgactttattttatctttt 53457340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 17420197 - 17420091
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    ||||||||  ||| |||||||||||||||||| || ||  ||  | ||||||||||| |||||| || |||||| ||||||||||| |||||||||||      
T  17420197 tatgaaaattgttcgactttattttatcttttcttataaaaatagtttatacataagtacttatgtgctaagcgcttatactataatcacttaattaagc 17420098  T
Q  313 tgtttat 319  Q
    |||||||    
T  17420097 tgtttat 17420091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 24263261 - 24263321
Alignment:
Q  259 ttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||||||||| ||||||| || ||| ||||||| ||||||||||||||||||| |||||||    
T  24263261 ttatacataaacacttatatgctaaacgtttatgctataagcacttaattaaactgtttat 24263321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 42550237 - 42550165
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||| ||| ||||||||||||||||||||||||| |||| |   |||||||||||||||||| | ||||||    
T  42550237 cttatggaaaaagtttgactttattttatcttttatcgtagaactagcttatacataagcacttgtatgataa 42550165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 44032075 - 44032145
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataa 283  Q
    |||||||||| ||||||||||||||| ||||| || ||| ||  |||||||||||| ||||||| ||||||    
T  44032075 tatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 23895330 - 23895233
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    ||||| |||||||||| ||||||||||||||| || ||| ||  ||||||||||||  |||||| ||||||| | |||| || ||||  |||||||||    
T  23895330 tatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgctttaagtgcttaattaa 23895233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 48282125 - 48282029
Alignment:
Q  216 gaaaacagtttgactttattttatcttt-tattgtagtaagtgcttatacataagcacttatctgataagcg-tttatactataagcacttaattaa 310  Q
    ||||| |||||||||||||||||||||| | || ||| ||  |||| ||||||||||||||| |||||||||  |||  | ||||||||||||||||    
T  48282125 gaaaatagtttgactttattttatctttcttttatagaaatagcttttacataagcacttatatgataagcgcattaagcaataagcacttaattaa 48282029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 244
Target Start/End: Complemental strand, 15360888 - 15360857
Alignment:
Q  213 tatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||||    
T  15360888 tatgaaaacagtttgactttattttatctttt 15360857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 33527223 - 33527286
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||||||||||||||||| ||||||||||||| || ||| ||  |||||| ||||||| |||||    
T  33527223 tatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataagcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 34380439 - 34380364
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtt 288  Q
    |||| |||||||||||||||||| |||||||| || ||| ||  |||||| | ||||||||| | |||||||||||    
T  34380439 tatgcaaacagtttgactttattgtatcttttgttttagaaatagcttatgcttaagcacttctatgataagcgtt 34380364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 43029482 - 43029537
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcact 273  Q
    ||||||||||| ||||||||||||||| |||||| ||  | |||||||||||||||    
T  43029482 aaacagtttgaatttattttatcttttgttgtagaaataggttatacataagcact 43029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 45999364 - 45999427
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    ||||||| |||||||||||||| ||||||||| || ||| ||  |||||||||| |||||||||    
T  45999364 tatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 46499934 - 46499993
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttat 276  Q
    |||||| ||||||||||||||||||||| || ||| ||  ||||||| ||||||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttat 46499993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 4549858 - 4549772
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatc-tgataagcgtttatactataagc 300  Q
    |||| ||| ||| ||||||||||||||||| || ||| ||  |||| |||||||||| ||||| || ||||||||||| ||||||||    
T  4549858 tgaagacaatttaactttattttatcttttgttatagaaatagcttgtacataagcatttatcgtgctaagcgtttatgctataagc 4549772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 244
Target Start/End: Original strand, 12477364 - 12477394
Alignment:
Q  214 atgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||||    
T  12477364 atgaaaacagtttgactttattttatctttt 12477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 23373364 - 23373438
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagc 285  Q
    ||||||||||||| ||||||||||||||||||||  | ||| ||  ||| |||| |||||| |||| ||||||||    
T  23373364 cttatgaaaacagattgactttattttatcttttgatatagaaatagctaatacgtaagcagttatatgataagc 23373438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 27738256 - 27738294
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtag 251  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  27738256 tatgaaaacaatttgactttattttatcttttgttgtag 27738294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 44936666 - 44936772
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaa 312  Q
    |||||||| ||||||||||||| ||||||||| || ||| ||   ||| ||| |||| | || | |||| |||| |||||||||||||| ||||||||      
T  44936666 tatgaaaatagtttgactttatcttatcttttgttatagaaataacttctacttaagtaattttttgatgagcgcttatactataagcatttaattaagt 44936765  T
Q  313 tgtttat 319  Q
    |||||||    
T  44936766 tgtttat 44936772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 50319288 - 50319230
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataag 269  Q
    ||||||||||||  |||||||||||||||||||| || ||| ||  |||||||||||||    
T  50319288 cttatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 14737779 - 14737812
Alignment:
Q  211 cttatgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||| |||||||||||||||||||||    
T  14737779 cttatgaaaacaatttgactttattttatctttt 14737812  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 40943465 - 40943498
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtag 251  Q
    ||||||||||||||||||||||||||| ||||||    
T  40943465 aaacagtttgactttattttatcttttgttgtag 40943498  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 45107616 - 45107548
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgata 282  Q
    |||||||| |||||||||||||||||| |||| || ||| ||  ||||||| |||||||||||| |||||    
T  45107616 tatgaaaatagtttgactttattttat-ttttcttatagaaatagcttatagataagcacttatatgata 45107548  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 48133071 - 48133112
Alignment:
Q  269 gcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||| |||||||||||||| |||||||| |||||||||    
T  48133071 gcacttatatgataagcgtttatgctataagcgcttaattaa 48133112  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 52286672 - 52286599
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcg 286  Q
    ||||||||  |||| ||||||||||||||||| |||||| ||   ||||| ||||||| ||||| |||||||||    
T  52286672 tatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataagcgcttatatgataagcg 52286599  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 608343 - 608447
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatg 314  Q
    |||||||||||| ||||||||| ||||||  || ||| ||  ||||||||||||| || ||| ||||||   |||||  ||||||| |||||||||  ||    
T  608343 tgaaaacagtttaactttatttcatctttgcttttagaaatagcttatacataagtacctatgtgataaatatttatgttataagcgcttaattaagttg 608442  T
Q  315 tttat 319  Q
    |||||    
T  608443 tttat 608447  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 6933037 - 6933105
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgat 281  Q
    |||||||||| |||||||||||||||| |||| || ||  ||  |||||||||| ||||||||| ||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacatgagcacttatttgat 6933105  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 26184745 - 26184652
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||||||| | ||||||||||||||| ||||| || ||| ||  | ||||||||||| |||||    |||||||||||| |||||||| || ||||||    
T  26184745 tatgaaaataatttgactttattttaccttttcttatagaaatagtttatacataagtactta----ataagcgtttatgctataagcgctcaattaa 26184652  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 28909980 - 28909910
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgttt 289  Q
    |||| ||||||||||||||| |||||||||| | | || |||||||||||||||| |||| | ||||||||||    
T  28909980 aaaatagtttgactttattt-atcttttattct-gaaattgcttatacataagcatttatgttataagcgttt 28909910  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 35080146 - 35080202
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataag 269  Q
    |||| |||||||||||||||||||||| |||| || ||| || |||||||| |||||    
T  35080146 tatggaaacagtttgactttattttattttttgttatagaaattgcttatatataag 35080202  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 38651483 - 38651547
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcactta 275  Q
    |||||||||||| || ||||||| |||||||||| || ||| |   |||||||||||||||||||    
T  38651483 cttatgaaaacaattcgactttagtttatcttttgttatagaattagcttatacataagcactta 38651547  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 49173389 - 49173293
Alignment:
Q  223 gtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaaaatgtttat 319  Q
    |||| |||||||||||| | |||||| || ||  ||||||| | |||||||||| ||| ||| | |||| |||||||||| |||||||  |||||||    
T  49173389 gtttaactttattttatttgttattgcagaaacagcttatagacaagcacttatatgagaagtgcttatgctataagcacataattaagttgtttat 49173293  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 27570 - 27483
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagc 300  Q
    |||||||||| ||||||||||||||||||| | || ||| ||   ||||||||||||||||||  ||||||| | |||| ||||||||    
T  27570 tatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagc 27483  T

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Target: scaffold0508 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 9851 - 9938
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagc 300  Q
    |||||||||  |||||||| ||||||| |||| || ||| ||   ||||||||||||||| ||| |||||||| ||||| ||||||||    
T  9851 tatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagcatttattctataagc 9938  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 4966 - 4869
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagtaagtgcttatacataagcacttatctgataagcgtttatactataagcacttaattaa 310  Q
    |||| ||||||||||| ||| |||||| | ||||| ||| ||  ||||||| ||| |||||||| |||||  | ||||| |||||||| |||||||||    
T  4966 tatggaaacagtttgaatttgttttatatattattatagaaatagcttatatataggcacttatatgatagacatttatgctataagcgcttaattaa 4869  T

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Target: scaffold0349 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 5744 - 5816
Alignment:
Q  229 ctttattttatcttttattgtagtaagtg-cttatacataagcacttatctgataagcgtttatactataagc 300  Q
    ||||||||||||||| ||| ||| || |  ||| || |||||||||||| ||||||| |||||||||||||||    
T  5744 ctttattttatctttaattatagaaaataacttgtatataagcacttatatgataagtgtttatactataagc 5816  T

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