View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5829_high_4 (Length: 445)

Name: NF5829_high_4
Description: NF5829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5829_high_4
NF5829_high_4
[»] chr4 (55 HSPs)
chr4 (19-251)||(7342146-7342378)
chr4 (294-370)||(17381284-17381360)
chr4 (213-261)||(19691353-19691401)
chr4 (213-261)||(19701938-19701986)
chr4 (211-261)||(4191685-4191736)
chr4 (214-269)||(7029361-7029416)
chr4 (360-435)||(11839866-11839941)
chr4 (360-435)||(17381483-17381558)
chr4 (213-256)||(31038943-31038986)
chr4 (211-261)||(51044532-51044583)
chr4 (215-261)||(1404368-1404414)
chr4 (211-261)||(7731716-7731766)
chr4 (360-430)||(13834425-13834495)
chr4 (305-370)||(8170991-8171056)
chr4 (296-369)||(12922168-12922241)
chr4 (305-374)||(17381576-17381645)
chr4 (212-257)||(24929443-24929488)
chr4 (213-261)||(9680610-9680658)
chr4 (360-420)||(38932765-38932825)
chr4 (362-430)||(51150940-51151008)
chr4 (213-257)||(54325113-54325157)
chr4 (316-371)||(4161644-4161699)
chr4 (214-257)||(20936079-20936122)
chr4 (214-261)||(23815316-23815363)
chr4 (173-204)||(23819123-23819154)
chr4 (392-435)||(48973336-48973379)
chr4 (217-263)||(17884012-17884058)
chr4 (392-430)||(36409658-36409696)
chr4 (392-430)||(36423824-36423862)
chr4 (360-430)||(45615722-45615792)
chr4 (217-263)||(46013380-46013426)
chr4 (217-263)||(46019706-46019752)
chr4 (217-263)||(46247162-46247208)
chr4 (215-261)||(47970264-47970310)
chr4 (360-430)||(56095118-56095188)
chr4 (213-258)||(5219576-5219621)
chr4 (216-261)||(20907119-20907164)
chr4 (213-254)||(54327525-54327566)
chr4 (360-420)||(312709-312769)
chr4 (213-257)||(927426-927470)
chr4 (217-257)||(3662298-3662338)
chr4 (213-257)||(4071832-4071876)
chr4 (294-374)||(11840060-11840140)
chr4 (213-261)||(22684592-22684640)
chr4 (360-420)||(26499409-26499469)
chr4 (213-261)||(30024646-30024694)
chr4 (213-257)||(30338668-30338712)
chr4 (213-257)||(32724069-32724113)
chr4 (217-261)||(34368823-34368867)
chr4 (219-263)||(39438618-39438662)
chr4 (213-261)||(42321955-42322003)
chr4 (213-257)||(44319900-44319943)
chr4 (217-261)||(50745946-50745990)
chr4 (217-261)||(52645829-52645873)
chr4 (217-261)||(53422308-53422352)
[»] chr6 (42 HSPs)
chr6 (228-435)||(18129815-18130022)
chr6 (228-371)||(23887423-23887570)
chr6 (360-435)||(23887590-23887664)
chr6 (363-435)||(9307397-9307469)
chr6 (217-261)||(9027523-9027567)
chr6 (358-435)||(16431590-16431667)
chr6 (234-279)||(18130218-18130263)
chr6 (234-279)||(23887878-23887923)
chr6 (213-261)||(323757-323805)
chr6 (222-261)||(2514648-2514687)
chr6 (360-431)||(10067658-10067729)
chr6 (211-257)||(31964669-31964716)
chr6 (211-261)||(2205642-2205692)
chr6 (360-430)||(6524958-6525028)
chr6 (213-261)||(1402942-1402990)
chr6 (213-261)||(2027482-2027530)
chr6 (213-253)||(3204618-3204658)
chr6 (294-374)||(10219537-10219617)
chr6 (213-261)||(29274305-29274353)
chr6 (217-261)||(34405051-34405095)
chr6 (218-261)||(4420563-4420606)
chr6 (213-244)||(10154184-10154215)
chr6 (220-259)||(30865430-30865469)
chr6 (360-434)||(25085019-25085093)
chr6 (211-261)||(31583647-31583697)
chr6 (211-257)||(31968091-31968137)
chr6 (228-261)||(781331-781364)
chr6 (294-371)||(6699686-6699763)
chr6 (297-374)||(9307489-9307566)
chr6 (216-261)||(20671944-20671989)
chr6 (216-261)||(24836278-24836323)
chr6 (213-254)||(27595643-27595684)
chr6 (211-244)||(31672542-31672575)
chr6 (212-257)||(32980491-32980536)
chr6 (216-261)||(34429769-34429814)
chr6 (213-261)||(281924-281972)
chr6 (213-261)||(323902-323950)
chr6 (213-261)||(10452436-10452484)
chr6 (213-261)||(22742312-22742360)
chr6 (217-257)||(24774708-24774748)
chr6 (213-261)||(24782005-24782053)
chr6 (217-261)||(27893993-27894037)
[»] chr8 (41 HSPs)
chr8 (360-420)||(21602124-21602184)
chr8 (211-261)||(14929190-14929240)
chr8 (289-371)||(17488222-17488304)
chr8 (298-372)||(21602204-21602278)
chr8 (216-261)||(6918258-6918303)
chr8 (213-261)||(33209296-33209344)
chr8 (217-261)||(35534941-35534985)
chr8 (216-282)||(26215421-26215487)
chr8 (211-261)||(36643945-36643995)
chr8 (211-261)||(40280279-40280329)
chr8 (224-261)||(1470943-1470980)
chr8 (316-369)||(6393805-6393857)
chr8 (316-369)||(14523974-14524027)
chr8 (213-258)||(27728097-27728142)
chr8 (213-261)||(4558744-4558792)
chr8 (294-374)||(7574372-7574451)
chr8 (295-359)||(18080183-18080247)
chr8 (217-257)||(28784875-28784915)
chr8 (217-261)||(31315533-31315577)
chr8 (217-261)||(40728498-40728542)
chr8 (360-435)||(3662414-3662489)
chr8 (214-261)||(42597347-42597394)
chr8 (216-258)||(10079142-10079184)
chr8 (217-255)||(10437837-10437875)
chr8 (211-261)||(14949834-14949884)
chr8 (211-245)||(43907873-43907907)
chr8 (213-246)||(1112218-1112251)
chr8 (216-261)||(11000640-11000685)
chr8 (211-244)||(20672735-20672768)
chr8 (220-257)||(39392744-39392781)
chr8 (212-260)||(39866811-39866860)
chr8 (224-261)||(40356817-40356854)
chr8 (213-261)||(2699252-2699300)
chr8 (220-256)||(11119082-11119118)
chr8 (213-261)||(12224975-12225023)
chr8 (217-257)||(14482152-14482192)
chr8 (224-260)||(26370935-26370971)
chr8 (217-261)||(26820145-26820189)
chr8 (213-261)||(31915345-31915393)
chr8 (211-263)||(41001230-41001282)
chr8 (217-257)||(42215386-42215426)
[»] chr3 (45 HSPs)
chr3 (213-261)||(49586992-49587040)
chr3 (360-435)||(14984504-14984579)
chr3 (212-261)||(40122827-40122876)
chr3 (213-261)||(38462227-38462275)
chr3 (211-261)||(44284132-44284182)
chr3 (317-371)||(53705981-53706035)
chr3 (213-261)||(1395617-1395665)
chr3 (294-374)||(14984407-14984486)
chr3 (213-261)||(15304423-15304471)
chr3 (213-261)||(20192682-20192730)
chr3 (86-142)||(21872213-21872269)
chr3 (213-261)||(22232772-22232820)
chr3 (213-261)||(24887359-24887407)
chr3 (213-261)||(32703084-32703132)
chr3 (225-276)||(905058-905109)
chr3 (173-212)||(36646387-36646426)
chr3 (214-261)||(51278234-51278281)
chr3 (217-247)||(1816543-1816573)
chr3 (215-261)||(41028929-41028975)
chr3 (395-436)||(8355044-8355085)
chr3 (216-261)||(12923404-12923449)
chr3 (318-371)||(31186452-31186505)
chr3 (216-261)||(36101514-36101559)
chr3 (216-261)||(36139824-36139869)
chr3 (378-435)||(40954485-40954542)
chr3 (294-371)||(46848399-46848476)
chr3 (212-261)||(53457323-53457372)
chr3 (294-373)||(621886-621963)
chr3 (217-261)||(2128331-2128375)
chr3 (392-420)||(3941675-3941703)
chr3 (213-261)||(8007771-8007819)
chr3 (213-261)||(10101552-10101600)
chr3 (213-261)||(10212477-10212525)
chr3 (213-261)||(20143871-20143918)
chr3 (213-261)||(23269271-23269318)
chr3 (213-261)||(23785201-23785249)
chr3 (213-261)||(27792818-27792866)
chr3 (213-261)||(28306104-28306152)
chr3 (217-257)||(31337481-31337521)
chr3 (213-257)||(34954033-34954077)
chr3 (213-261)||(42809247-42809295)
chr3 (213-261)||(43397773-43397821)
chr3 (213-261)||(44374720-44374768)
chr3 (217-261)||(48323767-48323811)
chr3 (217-261)||(48397592-48397636)
[»] chr5 (31 HSPs)
chr5 (213-259)||(14295454-14295500)
chr5 (213-257)||(28586842-28586886)
chr5 (211-261)||(7096201-7096251)
chr5 (316-373)||(7756429-7756486)
chr5 (216-261)||(38831535-38831580)
chr5 (216-256)||(29117009-29117049)
chr5 (213-261)||(35135738-35135786)
chr5 (213-257)||(37063150-37063194)
chr5 (217-256)||(1943202-1943241)
chr5 (360-435)||(8206226-8206301)
chr5 (214-257)||(10303751-10303794)
chr5 (214-261)||(10363696-10363743)
chr5 (214-261)||(12407738-12407785)
chr5 (222-257)||(35960364-35960399)
chr5 (217-279)||(465882-465944)
chr5 (316-374)||(8206319-8206377)
chr5 (213-243)||(41277426-41277456)
chr5 (213-242)||(583849-583878)
chr5 (215-244)||(985596-985625)
chr5 (228-261)||(11054132-11054165)
chr5 (394-435)||(14460085-14460126)
chr5 (87-132)||(17369309-17369354)
chr5 (216-261)||(28578838-28578883)
chr5 (213-242)||(32059665-32059694)
chr5 (211-260)||(37618913-37618962)
chr5 (294-370)||(917188-917264)
chr5 (360-420)||(9023366-9023426)
chr5 (218-258)||(10280657-10280697)
chr5 (213-257)||(19177429-19177473)
chr5 (213-261)||(20982211-20982259)
chr5 (213-261)||(37968837-37968885)
[»] chr2 (39 HSPs)
chr2 (211-261)||(32098382-32098432)
chr2 (213-261)||(17952777-17952825)
chr2 (217-276)||(28251950-28252009)
chr2 (158-261)||(7282964-7283076)
chr2 (213-261)||(14209223-14209271)
chr2 (86-142)||(22878194-22878250)
chr2 (213-257)||(33192143-33192187)
chr2 (213-261)||(33944551-33944599)
chr2 (213-261)||(40837504-40837552)
chr2 (360-435)||(15301520-15301595)
chr2 (392-435)||(15816905-15816948)
chr2 (213-260)||(31740035-31740082)
chr2 (210-257)||(37033994-37034041)
chr2 (213-243)||(5043636-5043666)
chr2 (360-430)||(7165662-7165732)
chr2 (213-259)||(18962114-18962160)
chr2 (214-244)||(33942113-33942143)
chr2 (316-369)||(6788517-6788570)
chr2 (213-250)||(11513855-11513892)
chr2 (229-258)||(29300594-29300623)
chr2 (215-244)||(29429835-29429864)
chr2 (224-261)||(31461384-31461421)
chr2 (213-258)||(34054977-34055022)
chr2 (359-420)||(41746423-41746484)
chr2 (213-261)||(1939408-1939456)
chr2 (213-261)||(3458603-3458651)
chr2 (217-261)||(5133718-5133762)
chr2 (213-261)||(5511511-5511559)
chr2 (217-261)||(9551525-9551569)
chr2 (217-261)||(10143118-10143162)
chr2 (213-261)||(11344360-11344408)
chr2 (225-261)||(25609742-25609778)
chr2 (218-254)||(27288586-27288622)
chr2 (213-261)||(28803582-28803630)
chr2 (360-420)||(31967466-31967526)
chr2 (213-241)||(33256706-33256734)
chr2 (213-257)||(37053544-37053588)
chr2 (217-261)||(40758969-40759013)
chr2 (217-265)||(44438919-44438967)
[»] chr7 (42 HSPs)
chr7 (213-258)||(12835013-12835058)
chr7 (211-256)||(33601167-33601212)
chr7 (213-261)||(5006585-5006633)
chr7 (210-260)||(3241388-3241438)
chr7 (211-261)||(7244648-7244698)
chr7 (213-259)||(30456526-30456572)
chr7 (217-261)||(3610820-3610864)
chr7 (213-261)||(3802215-3802263)
chr7 (360-420)||(5362342-5362402)
chr7 (213-261)||(27121662-27121710)
chr7 (213-261)||(28178915-28178963)
chr7 (212-244)||(30160965-30160997)
chr7 (213-261)||(33894569-33894616)
chr7 (213-261)||(35536053-35536101)
chr7 (213-261)||(39591543-39591591)
chr7 (224-276)||(42656446-42656498)
chr7 (213-261)||(45593795-45593843)
chr7 (213-276)||(11208380-11208443)
chr7 (214-261)||(28340473-28340520)
chr7 (217-256)||(33601794-33601833)
chr7 (217-264)||(47004030-47004077)
chr7 (213-256)||(47046184-47046227)
chr7 (217-247)||(31338468-31338498)
chr7 (316-370)||(32996259-32996313)
chr7 (213-258)||(9527166-9527211)
chr7 (316-373)||(12927834-12927891)
chr7 (213-242)||(29363483-29363512)
chr7 (216-261)||(30133995-30134040)
chr7 (212-260)||(396285-396332)
chr7 (213-257)||(1417214-1417258)
chr7 (213-257)||(2727436-2727480)
chr7 (217-257)||(2999141-2999181)
chr7 (360-420)||(8062789-8062849)
chr7 (221-261)||(31341140-31341180)
chr7 (392-420)||(32996367-32996395)
chr7 (213-261)||(39551624-39551672)
chr7 (217-261)||(43152982-43153026)
chr7 (213-261)||(43318604-43318652)
chr7 (212-244)||(44239055-44239087)
chr7 (213-261)||(45813256-45813304)
chr7 (213-253)||(46825052-46825092)
chr7 (211-243)||(47616704-47616736)
[»] chr1 (46 HSPs)
chr1 (213-261)||(33527223-33527271)
chr1 (213-256)||(15360845-15360888)
chr1 (211-261)||(14737779-14737829)
chr1 (211-261)||(42550187-42550237)
chr1 (211-261)||(50319238-50319288)
chr1 (316-369)||(16192275-16192328)
chr1 (214-259)||(17631178-17631223)
chr1 (213-254)||(27738256-27738297)
chr1 (316-365)||(33747291-33747340)
chr1 (211-259)||(23373364-23373412)
chr1 (213-261)||(23895282-23895330)
chr1 (213-261)||(34380391-34380439)
chr1 (211-263)||(42351980-42352032)
chr1 (212-256)||(45234148-45234192)
chr1 (213-261)||(45999364-45999412)
chr1 (217-261)||(46499934-46499978)
chr1 (392-435)||(6541134-6541177)
chr1 (213-276)||(35080146-35080209)
chr1 (218-261)||(40943465-40943508)
chr1 (218-257)||(43029482-43029521)
chr1 (214-261)||(49517016-49517063)
chr1 (223-261)||(7200928-7200966)
chr1 (214-244)||(12477364-12477394)
chr1 (316-366)||(19464237-19464287)
chr1 (211-261)||(26293180-26293230)
chr1 (211-261)||(28077121-28077171)
chr1 (213-259)||(31517816-31517862)
chr1 (294-364)||(32670016-32670086)
chr1 (360-430)||(49880167-49880237)
chr1 (215-260)||(15437910-15437955)
chr1 (216-261)||(36151584-36151629)
chr1 (228-261)||(44251364-44251397)
chr1 (217-261)||(4699692-4699736)
chr1 (213-261)||(5756762-5756810)
chr1 (213-261)||(6074420-6074468)
chr1 (213-257)||(7218150-7218194)
chr1 (392-420)||(9890650-9890678)
chr1 (213-261)||(15942823-15942871)
chr1 (213-257)||(17628549-17628593)
chr1 (213-261)||(25719480-25719528)
chr1 (299-370)||(30519042-30519114)
chr1 (213-261)||(30815711-30815759)
chr1 (213-261)||(38867909-38867957)
chr1 (213-257)||(39777613-39777657)
chr1 (213-261)||(45107569-45107616)
chr1 (213-261)||(52286624-52286672)
[»] scaffold0590 (1 HSPs)
scaffold0590 (213-261)||(1150-1198)
[»] scaffold0275 (1 HSPs)
scaffold0275 (213-261)||(2777-2825)
[»] scaffold0329 (1 HSPs)
scaffold0329 (294-372)||(6469-6547)
[»] scaffold0045 (1 HSPs)
scaffold0045 (360-418)||(20633-20691)
[»] scaffold0284 (1 HSPs)
scaffold0284 (360-420)||(2465-2525)
[»] scaffold0114 (1 HSPs)
scaffold0114 (360-420)||(35039-35099)
[»] scaffold0024 (1 HSPs)
scaffold0024 (213-261)||(27522-27570)


Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 7342378 - 7342146
Alignment:
Q  19 acataccatatgctactgcaatgcctaacacaatatcaaagttttgttatctccacgactgacggtcatgtttggattgacttatatgatcttatcaact 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7342378 acataccatatgctactgcaatgcctaacacaatatcaaagttttgttatctccaggactgacggtcatgtttggattgacttatatgatcttatcaact 7342279  T
Q  119 gaaataatcacttgcgagactgttgtagttgacagatgaaaacaagttataatgtgtccataagttgttttcatcttatttctatagactctcttatgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7342278 gaaataatcacttgcgagactgttgtagttgacagatgaaaacaagttataatgtgtccgtaagttgttttcatcttatttctatagactctcttatgaa 7342179  T
Q  219 aacagtttgactttattttatcttttattgtag 251  Q
    ||||||||||||||||||||||||||| |||||    
T  7342178 aacagtttgactttattttatcttttactgtag 7342146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 17381284 - 17381360
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtc 370  Q
    |||||||||| ||||| || | ||||||| |||||||||| ||| |||||||| |||||| ||||||||||| ||||    
T  17381284 taatagtcattttggttcctgaatgtgtagcaagtagtcacaatagtccttcaatgtatcaaaatttcaaaaaagtc 17381360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 19691401 - 19691353
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  19691401 tatgaaaacaggttgactttattttaacttttattatagaaatagctta 19691353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 19701986 - 19701938
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  19701986 tatgaaaacaggttgactttattttaacttttattatagaaatagctta 19701938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 4191736 - 4191685
Alignment:
Q  211 cttatgaaaacagtttgacttta-ttttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  4191736 cttatgaaaacagtttgactttatttttatcttttgttatagaaatagctta 4191685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 7029416 - 7029361
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagcttacatttaag 269  Q
    ||||||||| ||||||| ||||||||||||| || ||||||||||||||| |||||    
T  7029416 atgaaaacaatttgactctattttatcttttcttatagaaatagcttacaattaag 7029361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 11839866 - 11839941
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    |||||||||||| || |||||||||| ||   ||||||||||||||||||||||||||| | || |||||| ||||    
T  11839866 tcaaaatagtccttgacattaaaatacttcgttaatattgtcatattagtccttcaatacacttacttattgtcat 11839941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 17381558 - 17381483
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    |||||||||||| ||  ||||||||| ||   ||||||||||||||||||||||||||||| || |||||| ||||    
T  17381558 tcaaaatagtccttgatattaaaatatttcgttaatattgtcatattagtccttcaatatacttacttattatcat 17381483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 31038943 - 31038986
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaata 256  Q
    |||||||||| |||||||||||||||||| ||||||||||||||    
T  31038943 tatgaaaacaatttgactttattttatctattattgtagaaata 31038986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 51044532 - 51044583
Alignment:
Q  211 cttatgaaaaca-gtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  51044532 cttatgaaaacaagtttgactttattttatcttttgttatagaaatagctta 51044583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 1404414 - 1404368
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||| ||||||||||||||||| |||||||||||||    
T  1404414 tgaaaacaatttgaccttattttatcttttattatagaaatagctta 1404368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 7731766 - 7731716
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||| |||||||||  ||||||||| |||||||||||||    
T  7731766 cttatgaaaacagtttaactttatttagtcttttattatagaaatagctta 7731716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 13834425 - 13834495
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    |||||||||||  |  |||||||||||||   ||||||||||||||||||||||||||||| || ||||||    
T  13834425 tcaaaatagtctttaacattaaaataatttgttaatattgtcatattagtccttcaatatacttacttatt 13834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 8171056 - 8170991
Alignment:
Q  305 ttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtc 370  Q
    |||||||| ||||||||||  |||||||||||| |||| ||| |||||  ||||||||||||||||    
T  8171056 ttggtccctggatgtgtaatgagtagtcataatagtccctcaatgtataaaaatttcaaaatagtc 8170991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 12922168 - 12922241
Alignment:
Q  296 atagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagt 369  Q
    ||||| || |||||||| | |||||||| ||||||||| ||| ||  |||| ||||||||||||||||||||||    
T  12922168 atagttattttggtccctgaatgtgtaataagtagtcacaatagtatttcaatgtatcgaaatttcaaaatagt 12922241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 17381645 - 17381576
Alignment:
Q  305 ttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    |||||||| | ||| |||||||||||||| ||| |||| ||| |||||| ||||| ||||||||||||||    
T  17381645 ttggtccctgaatgagtaacaagtagtcacaatagtccctcaatgtatcaaaattccaaaatagtccctg 17381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 24929488 - 24929443
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||| |||||||||||||||||| || |||||||||    
T  24929488 ttatgaaaacagttagactttattttatcttttgttatagaaatag 24929443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 9680658 - 9680610
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| |||| |||||||||||||||||||||||| | |||||||||||    
T  9680658 tatgagaacaatttgactttattttatcttttattatcgaaatagctta 9680610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 38932825 - 38932765
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||| ||  |||||||||| ||   |||||||||||||||||||||||||||||    
T  38932825 tcaaaatagtctctaacattaaaatatttcattaatattgtcatattagtccttcaatata 38932765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 430
Target Start/End: Original strand, 51150940 - 51151008
Alignment:
Q  362 aaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    ||||||||||||  |||||||||| ||   |||||||||||||||||| |||||||||| || ||||||    
T  51150940 aaaatagtccctaacattaaaatattttgttaatattgtcatattagtacttcaatatacttacttatt 51151008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 54325113 - 54325157
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||||||||| |  |||||||||    
T  54325113 tatgaaaacagtttgactttattttatcttttgtaatagaaatag 54325157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 4161644 - 4161699
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    ||||||||  |||||||| ||| |||||||| |||||| |||||||||||||||||    
T  4161644 atgtgtaatgagtagtcacaatagtccttcaatgtatcaaaatttcaaaatagtcc 4161699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 20936079 - 20936122
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||| ||||||||||||||||||||||| || |||||||||    
T  20936079 atgaaaatagtttgactttattttatcttttgttatagaaatag 20936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 23815363 - 23815316
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||| |||||||||||||| || |||||||| ||||    
T  23815363 atgaaaacagtttgacattattttatcttttgttatagaaataactta 23815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 23819154 - 23819123
Alignment:
Q  173 tgtccataagttgttttcatcttatttctata 204  Q
    ||||||||||||||||||||||||||||||||    
T  23819154 tgtccataagttgttttcatcttatttctata 23819123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 435
Target Start/End: Complemental strand, 48973379 - 48973336
Alignment:
Q  392 taatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||||||||||||||||||||| || |||||| ||||    
T  48973379 taatattgtcatattagtccttcaatatacttacttattgtcat 48973336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 17884058 - 17884012
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    |||||| ||| ||||||||||||||||| || |||||||||||||||    
T  17884058 aaaacaatttaactttattttatcttttgttatagaaatagcttaca 17884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 430
Target Start/End: Complemental strand, 36409696 - 36409658
Alignment:
Q  392 taatattgtcatattagtccttcaatataattgcttatt 430  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  36409696 taatattgtcatattagtccttcaatatacttacttatt 36409658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 430
Target Start/End: Complemental strand, 36423862 - 36423824
Alignment:
Q  392 taatattgtcatattagtccttcaatataattgcttatt 430  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  36423862 taatattgtcatattagtccttcaatatacttacttatt 36423824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 45615792 - 45615722
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    ||||||||||| ||   ||||||||||||   |||||||||||| |||||||||||||||| || ||||||    
T  45615792 tcaaaatagtctctaatattaaaataatttgttaatattgtcattttagtccttcaatatacttacttatt 45615722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 46013380 - 46013426
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    |||||||||||||||||||||||||||| ||  |||||||| |||||    
T  46013380 aaaacagtttgactttattttatcttttgttccagaaatagtttaca 46013426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 46019706 - 46019752
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    ||||||||||| ||||||||| |||||| || |||||||||||||||    
T  46019706 aaaacagtttggctttattttttcttttgttctagaaatagcttaca 46019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 46247208 - 46247162
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    |||||||||||||||||||||||||||| ||  |||||||| |||||    
T  46247208 aaaacagtttgactttattttatcttttgttccagaaatagtttaca 46247162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 47970310 - 47970264
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| |||||||||| |||||||||||| || |||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagctta 47970264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 56095118 - 56095188
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    |||| |||||||||  |||||||||||||   ||||||||||||||||||| || |||||| || ||||||    
T  56095118 tcaacatagtccctaacattaaaataatttgttaatattgtcatattagtcttttaatatacttacttatt 56095188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 5219576 - 5219621
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    |||||||| ||||| |||||||||||||||||||| |||| |||||    
T  5219576 tatgaaaatagtttaactttattttatcttttattatagagatagc 5219621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 20907164 - 20907119
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||| ||||||||||||||||| || || ||||||||||    
T  20907164 gaaaacagtttcactttattttatcttttcttatacaaatagctta 20907119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 54327525 - 54327566
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaa 254  Q
    |||||||||||||||||||| ||||||||||| || ||||||    
T  54327525 tatgaaaacagtttgactttgttttatcttttgttatagaaa 54327566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 312769 - 312709
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||||||  |||| ||||| ||   | |||||||||||||||||||||||||||    
T  312769 tcaaaatagtccctaacattcaaatacttcattgatattgtcatattagtccttcaatata 312709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 927470 - 927426
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||    
T  927470 tatgaaaacagtttgactttatttcatcttttgtattagaaatag 927426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 3662338 - 3662298
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||||| || ||| |||||    
T  3662338 aaaacagtttgactttattttatcttttgttataggaatag 3662298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 4071876 - 4071832
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||| | ||||||||||||||||||||| || |||||||||    
T  4071876 tatgaaaataatttgactttattttatcttttgttatagaaatag 4071832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 11840140 - 11840060
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    |||||||||| |||||||| | ||| ||||  |||||||  ||| | || ||| |||||| ||||||||||||||||||||    
T  11840140 taatagtcattttggtccctgaatgcgtaaggagtagtcgcaataggccctcaatgtatcaaaatttcaaaatagtccctg 11840060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 22684592 - 22684640
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||| | ||| || |||||||||||||    
T  22684592 tatgaaaacaatttgactttattttaccgtttgttatagaaatagctta 22684640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 26499469 - 26499409
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    |||||||||||| |  |||||||||| ||   ||||||||||||||||||| |||||||||    
T  26499469 tcaaaatagtccgtaacattaaaatacttcattaatattgtcatattagtcattcaatata 26499409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 30024694 - 30024646
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||| ||||||||||||||||| || |||||||| ||||    
T  30024694 tatgaaaacaattttactttattttatcttttgttatagaaataactta 30024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 30338668 - 30338712
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||| |||||||| |||||||| || |||||||||    
T  30338668 tatgaaaacagtttaactttattctatcttttgttatagaaatag 30338712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 32724113 - 32724069
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||| ||||||||||||||||||||||| |  |||||||||    
T  32724113 tatgaaaatagtttgactttattttatcttttgtaatagaaatag 32724069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 34368867 - 34368823
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||||||||| ||||||||||| || |||||||||||||    
T  34368867 aaaacaatttgactttgttttatcttttgttatagaaatagctta 34368823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 39438618 - 39438662
Alignment:
Q  219 aacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    |||| ||||||||||||||||||| | || |||||||||||||||    
T  39438618 aacaatttgactttattttatcttatgttatagaaatagcttaca 39438662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 42321955 - 42322003
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||| ||| || || ||||||||||    
T  42321955 tatgaaaacaatttgactttattttatcatttgttataaaaatagctta 42322003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 44319943 - 44319900
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||||| |||||||||||||||||| || |||||||||    
T  44319943 tatgaaaacagttcgactttattttatctttt-ttatagaaatag 44319900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 50745990 - 50745946
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| ||||||||||||||| || || ||||||||||    
T  50745990 aaaacagtttgattttattttatcttttgttataaaaatagctta 50745946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 52645829 - 52645873
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| || |||||||||||| || |||||||||||||    
T  52645829 aaaacagtttgaattgattttatcttttgttatagaaatagctta 52645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 53422352 - 53422308
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| |||||| ||||||||||||| | ||||||||||||||||    
T  53422352 aaaactgtttgaatttattttatcttgtgttgtagaaatagctta 53422308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 228 - 435
Target Start/End: Original strand, 18129815 - 18130022
Alignment:
Q  228 actttattttatcttttattgtagaaatagcttacatttaagggcttatcattattttatcttggctaatagtcatgttggtcccaggatgtgtaacaag 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18129815 actttattttatcttttattgtagaaatagcttacatttaagggcttatcattattttatcttggctaatagtcatgttggtcccaggatgtgtaacaag 18129914  T
Q  328 tagtcataatggtccttcattgtatcgaaatttcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgctt 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18129915 tagtcataatggtccttcattgtatcgaaatttcaaaatagtccctgtcattaaaataattgtgtaatattgtcatattagtccttcaatataattgctt 18130014  T
Q  428 attttcat 435  Q
    ||||||||    
T  18130015 attttcat 18130022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 228 - 371
Target Start/End: Original strand, 23887423 - 23887570
Alignment:
Q  228 actttattttatcttttattgtagaaatag-----cttacatttaagggcttatcattattttatcttggctaatagtcatgttggtcccaggatgtgta 322  Q
    ||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23887423 actttattttatcttttattgtagaaatagcatagcttacatttaagggcttatcattattttatcttggctaatagtcatgttggt-cctggatgtgta 23887521  T
Q  323 acaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  23887522 acaagtagtcataatggtttttcattgtatcgaaatttcaaaattgtcc 23887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 23887590 - 23887664
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23887590 tcaaaatag-ccctgtcattaaaataattgtgtaatattgtcatattagtccttcaatataattgcttattttcat 23887664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 435
Target Start/End: Complemental strand, 9307469 - 9307397
Alignment:
Q  363 aaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    |||||||||||| |||||||||||||   ||| ||||||||||||||||||||||||| || |||||||||||    
T  9307469 aaatagtccctgacattaaaataattcattaacattgtcatattagtccttcaatatacttacttattttcat 9307397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 9027567 - 9027523
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  9027567 aaaacagtttgactttattttatcttctattgtagaaatagctta 9027523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 16431667 - 16431590
Alignment:
Q  358 tttcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||||| ||  |||||||||||||   ||||||||||||||||||| ||||||||| || |||||| ||||    
T  16431667 tttcaaaatagtctctaacattaaaataattcactaatattgtcatattagtcattcaatatacttacttattgtcat 16431590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 18130218 - 18130263
Alignment:
Q  234 ttttatcttttattgtagaaatagcttacatttaagggcttatcat 279  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||    
T  18130218 ttttatcttttattgtagaaatagcttacatataagcgcttatcat 18130263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 23887878 - 23887923
Alignment:
Q  234 ttttatcttttattgtagaaatagcttacatttaagggcttatcat 279  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||    
T  23887878 ttttatcttttattgtagaaatagcttacatataagcgcttatcat 23887923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 323805 - 323757
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||    
T  323805 tatgaaaacagtttgaatttattttatcttttaatatagaaatagctta 323757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 2514687 - 2514648
Alignment:
Q  222 agtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  2514687 agtttgactttattttatcttttattatagaaatagctta 2514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 10067729 - 10067658
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattt 431  Q
    ||||||||||| ||| |||||||||| ||   ||||||||||||||||||| ||||||||| || |||||||    
T  10067729 tcaaaatagtctctgacattaaaatactttgttaatattgtcatattagtcattcaatatacttacttattt 10067658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 31964669 - 31964716
Alignment:
Q  211 cttatgaaaacagttt-gactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  31964669 cttatgaaaacagttttgactttattttatcttttattgtaggaatag 31964716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 2205642 - 2205692
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| ||||||||| ||||||||||| || |||||||||||||    
T  2205642 cttatgaaaacaatttgactttgttttatcttttgttttagaaatagctta 2205692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 6525028 - 6524958
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    |||||||||||| |  |||||||||| ||   ||||||||||||||||||||||||||||| || ||||||    
T  6525028 tcaaaatagtccgtaacattaaaatacttcattaatattgtcatattagtccttcaatatatttacttatt 6524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1402990 - 1402942
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||| ||||||||||||||||| || |||||||||||||    
T  1402990 tatgaaaatagtttaactttattttatcttttgttatagaaatagctta 1402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 2027482 - 2027530
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||||||||||||||||||||| || || ||||||||||    
T  2027482 tatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 3204618 - 3204658
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaa 253  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  3204618 tatgaaaacagttcgactttattttatcttttattatagaa 3204658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 10219537 - 10219617
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    |||||||||| |||||||| | ||||||||| ||||| || ||| |||| | | ||| |||||||||||||||||| ||||    
T  10219537 taatagtcattttggtccctgaatgtgtaacgagtagccacaatagtcccttaatgtgtcgaaatttcaaaatagttcctg 10219617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 29274305 - 29274353
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| |||||||||||||||||||||  | |||||||||||||    
T  29274305 tatgaaaacaatttgactttattttatcttttgctatagaaatagctta 29274353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 34405095 - 34405051
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||||||||||||||| |||||||| |||||||||||||    
T  34405095 aaaacaatttgactttattttaacttttattatagaaatagctta 34405051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 4420606 - 4420563
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||| || ||||| |||||||    
T  4420606 aaacagtttgactttattttatcttttgttatagaagtagctta 4420563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 244
Target Start/End: Complemental strand, 10154215 - 10154184
Alignment:
Q  213 tatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||||    
T  10154215 tatgaaaacagtttgactttattttatctttt 10154184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 30865469 - 30865430
Alignment:
Q  220 acagtttgactttattttatcttttattgtagaaatagct 259  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  30865469 acagtttgactttattttatcttttgttatagaaatagct 30865430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 25085093 - 25085019
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttca 434  Q
    |||||||||||  |  |||||||||||||   |||||||||||||||| || ||||||||| || ||||||||||    
T  25085093 tcaaaatagtctttaacattaaaataatttgttaatattgtcatattattctttcaatatacttacttattttca 25085019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 31583697 - 31583647
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| |||||||| ||||||||| || || |||||||||||||    
T  31583697 cttatgaaaacaatttgacttcattttatctcttgttatagaaatagctta 31583647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 31968091 - 31968137
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||    
T  31968091 cttatgaaaatagtttgactttattttattttctattgtaggaatag 31968137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 781364 - 781331
Alignment:
Q  228 actttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||| |||||||||||||    
T  781364 actttattttatcttttattatagaaatagctta 781331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 6699763 - 6699686
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    |||||||||| ||||||||   |||| |||||||||| |||||| |||| ||| | |||| || ||||||||||||||    
T  6699763 taatagtcattttggtccctaaatgtataacaagtaggcataatagtccctcaatatatcaaattttcaaaatagtcc 6699686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 9307566 - 9307489
Alignment:
Q  297 tagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    ||||||| || ||||| | ||||||||| |||||| |||||||| |  || ||||| ||||||| |||||||||||||    
T  9307566 tagtcattttagtccctgaatgtgtaacgagtagttataatggtaccccaatgtattgaaattttaaaatagtccctg 9307489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 20671944 - 20671989
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||| |||||||||||||||||||||  | |||||||||||||    
T  20671944 gaaaacaatttgactttattttatcttttgatctagaaatagctta 20671989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 24836278 - 24836323
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||| ||||||||||||||||||||| || |||||||| ||||    
T  24836278 gaaaacaatttgactttattttatcttttgttatagaaataactta 24836323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 27595643 - 27595684
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaa 254  Q
    |||||||| | |||||||||||||||||||||||| ||||||    
T  27595643 tatgaaaataatttgactttattttatcttttattatagaaa 27595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 31672542 - 31672575
Alignment:
Q  211 cttatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||| ||||    
T  31672542 cttatgaaaacagtttgactttattttatttttt 31672575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 32980536 - 32980491
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||  |||||||||||||||||| ||||||| |||||||||    
T  32980536 ttatgaaagtagtttgactttattttatgttttattatagaaatag 32980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 34429769 - 34429814
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  34429769 gaaaacagttagactttattttatctcttattatagaaataactta 34429814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 281924 - 281972
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||  |||||||||||||||||||| || ||| |||||||||    
T  281924 tatgaaaacaagttgactttattttatcttttgttataggaatagctta 281972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 323950 - 323902
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||| ||| ||||| ||||| |||||||| |||||||    
T  323950 tatgaaaacagtttgaatttgttttaacttttgttgtagaagtagctta 323902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 10452436 - 10452484
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||||| |||||||||| |||| || |||||||||||||    
T  10452436 tatgaaaatagtttgattttattttatattttgttatagaaatagctta 10452484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 22742360 - 22742312
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||| ||| || || ||||||||||    
T  22742360 tatgaaaacaatttgactttattttatcctttgttatacaaatagctta 22742312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 24774748 - 24774708
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  24774748 aaaacagtttgactttattttatattttgttatagaaatag 24774708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 24782053 - 24782005
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||| || |||||||||||| || |||||||||||||    
T  24782053 tatgaaaacaatttgatttgattttatcttttgttatagaaatagctta 24782005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 27894037 - 27893993
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| |||||||||||||||| || | ||||||||||||||||    
T  27894037 aaaacaatttgactttattttatattctgttgtagaaatagctta 27893993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 21602184 - 21602124
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||    
T  21602184 tcaaaatagtccctgacattaaaataattcgttaatattgtcatattagtccttcaatata 21602124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 14929190 - 14929240
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  14929190 cttatgaaaacagtttgactctattttgtcttttattatagaaatagctta 14929240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 17488304 - 17488222
Alignment:
Q  289 ttggctaatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    |||| ||| |||||| ||| |||| | |||||||||||||||||| ||| |||| ||| |||| |||||||||||||||||||    
T  17488304 ttgggtaacagtcattttgctccctgaatgtgtaacaagtagtcacaatagtccctcaatgtagcgaaatttcaaaatagtcc 17488222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 372
Target Start/End: Complemental strand, 21602278 - 21602204
Alignment:
Q  298 agtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccc 372  Q
    |||||| |||||||  | ||||| ||||||||| ||||||||||| ||| | |||||||||||||||||||||||    
T  21602278 agtcattttggtccttgaatgtgcaacaagtagccataatggtccctcaatatatcgaaatttcaaaatagtccc 21602204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 6918258 - 6918303
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||||||||| || ||||||||||    
T  6918258 gaaaacagtttgactttattttatcttttattatataaatagctta 6918303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 33209296 - 33209344
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  33209296 tatgaaaacagttcgactttattttatctttcattatagaaatagctta 33209344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 35534941 - 35534985
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  35534941 aaaacagtttgactttattttaacttttattatagaaatagctta 35534985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 26215487 - 26215421
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagcttacatttaagggcttatcattat 282  Q
    ||||| ||||| ||||||||||||||||| || ||||||||||||| |  |||| ||||||||||||    
T  26215487 gaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttatcattat 26215421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 36643945 - 36643995
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||||||||    
T  36643945 cttatgaaaatagtttgactttactgtatcttttattatagaaatagctta 36643995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 40280279 - 40280329
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||| ||||    
T  40280279 cttatgaaaacaattttactttattttatcttttgttgtagaaataactta 40280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 1470943 - 1470980
Alignment:
Q  224 tttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1470943 tttgactttattttatcttttattatagaaatagctta 1470980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 6393805 - 6393857
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagt 369  Q
    |||||||||||||||  ||||||||||| || ||||||||||||||||||||||    
T  6393805 atgtgtaacaagtagcaataatggtcct-caatgtatcgaaatttcaaaatagt 6393857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 14524027 - 14523974
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagt 369  Q
    |||||||||||||||||||||| |||| | | ||| ||||||||||||||||||    
T  14524027 atgtgtaacaagtagtcataatagtcccttaatgtgtcgaaatttcaaaatagt 14523974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 27728097 - 27728142
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||    
T  27728097 tatgaaaatagtttgactttattttatctttttttatagaaatagc 27728142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4558792 - 4558744
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| | ||| |||||||||||||||||||| |||||||||||||    
T  4558792 tatgaaaataatttaactttattttatcttttattatagaaatagctta 4558744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 7574372 - 7574451
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    |||||| ||| |||||||  | |||||||||||||| ||||||| ||||  || |||||| ||||||||||||||||||||    
T  7574372 taatagacattttggtccttgaatgtgtaacaagtaatcataatagtcccacaatgtatc-aaatttcaaaatagtccctg 7574451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 18080183 - 18080247
Alignment:
Q  295 aatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatt 359  Q
    ||||||||| ||||||||   ||||||||||| |||||| |||||||||||| ||||| ||||||    
T  18080183 aatagtcattttggtccctaaatgtgtaacaaatagtcacaatggtccttcaatgtattgaaatt 18080247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 28784875 - 28784915
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  28784875 aaaacaatttgactttattttatcttttattttagaaatag 28784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 31315533 - 31315577
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| |||||||||||||||||||||||||| || ||||||||||    
T  31315533 aaaatagtttgactttattttatcttttattataaaaatagctta 31315577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 40728498 - 40728542
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||||| || |||||||| ||||    
T  40728498 aaaacagtttgactttattttatcttttgttatagaaataactta 40728542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 3662414 - 3662489
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||| ||||||||  |||||||||||||   |||||||||||||||||| ||| |||||| || |||||| ||||    
T  3662414 tcaaattagtccctagcattaaaataatttgttaatattgtcatattagttctttaatatacttacttattgtcat 3662489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 42597394 - 42597347
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| ||| ||||||||||||||||| || |||||||||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagctta 42597347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 10079142 - 10079184
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    |||||||||||||||| ||||||||||||||  ||||||||||    
T  10079142 gaaaacagtttgacttcattttatcttttatcatagaaatagc 10079184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 10437875 - 10437837
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaat 255  Q
    |||||||||||||||||||||||||||| || |||||||    
T  10437875 aaaacagtttgactttattttatcttttgttatagaaat 10437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 14949884 - 14949834
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||| ||||||||||||| || ||||| |||||||    
T  14949884 cttatgaaaagagtttgactctattttatcttttgttatagaagtagctta 14949834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 43907873 - 43907907
Alignment:
Q  211 cttatgaaaacagtttgactttattttatctttta 245  Q
    |||||||||||| ||||||||||||||||||||||    
T  43907873 cttatgaaaacaatttgactttattttatctttta 43907907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 1112251 - 1112218
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttat 246  Q
    |||||||||||||||||||||||| |||||||||    
T  1112251 tatgaaaacagtttgactttatttgatcttttat 1112218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 11000640 - 11000685
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||| ||||||||||||||||||||| || | |||||||||||    
T  11000640 gaaaacaatttgactttattttatcttttgttatggaaatagctta 11000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 20672768 - 20672735
Alignment:
Q  211 cttatgaaaacagtttgactttattttatctttt 244  Q
    ||||| ||||||||||||||||||||||||||||    
T  20672768 cttataaaaacagtttgactttattttatctttt 20672735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 39392744 - 39392781
Alignment:
Q  220 acagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||||||||||||||||| || |||||||||    
T  39392744 acagtttgactttattttatcttttgttatagaaatag 39392781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 39866811 - 39866860
Alignment:
Q  212 ttatgaaaacagttt-gactttattttatcttttattgtagaaatagctt 260  Q
    ||||||||||||||| |||||||||||||||||| || |||| |||||||    
T  39866811 ttatgaaaacagttttgactttattttatcttttgttatagagatagctt 39866860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 40356854 - 40356817
Alignment:
Q  224 tttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||| || ||||||||||    
T  40356854 tttgactttattttatcttttattatataaatagctta 40356817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 2699300 - 2699252
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||| |||||||||||| |||| ||||||||||| ||||    
T  2699300 tatgaaaatagtttaactttattttatattttgttgtagaaataactta 2699252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 11119082 - 11119118
Alignment:
Q  220 acagtttgactttattttatcttttattgtagaaata 256  Q
    ||||||||||||||||||||||||| || ||||||||    
T  11119082 acagtttgactttattttatcttttgttatagaaata 11119118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 12224975 - 12225023
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||||||||||||||||||||| |  |||||||| ||||    
T  12224975 tatgaaaatagtttgactttattttatcttttgtcttagaaataactta 12225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 14482192 - 14482152
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||| ||||||||||||||||||||| || |||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatag 14482152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 26370971 - 26370935
Alignment:
Q  224 tttgactttattttatcttttattgtagaaatagctt 260  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  26370971 tttgactttattttatcttttgttgtaaaaatagctt 26370935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 26820189 - 26820145
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| ||||||||||||||||||||||| || |||||||| ||||    
T  26820189 aaaatagtttgactttattttatcttttgttatagaaataactta 26820145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 31915345 - 31915393
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| |||||||||||| |||||||| || |||| ||||||||    
T  31915345 tatgaaaacaatttgactttattctatcttttgttatagatatagctta 31915393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 41001230 - 41001282
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    |||||||||||||| |||||| |||| |||| || || |||||||||||||||    
T  41001230 cttatgaaaacagtctgacttcatttaatctcttgttatagaaatagcttaca 41001282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 42215386 - 42215426
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  42215386 aaaacagtttgactttattttatctcatgttgtagaaatag 42215426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 49586992 - 49587040
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||    
T  49586992 tatgaaaacagtttgactttattttatcttttgttatagaaatagctta 49587040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 14984504 - 14984579
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    |||||||||| |||| |||||||||| ||   |||||||||||||||| |||||||||||| ||||||||| ||||    
T  14984504 tcaaaatagttcctgacattaaaatatttcgttaatattgtcatattaatccttcaatatacttgcttattgtcat 14984579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 40122827 - 40122876
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||||    
T  40122827 ttatgaaaacagtttgactttattttatcttttgttattgaaatagctta 40122876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 38462275 - 38462227
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||    
T  38462275 tatgaaaacagtttgactttattttatcttttggtatagaaatagctta 38462227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 44284132 - 44284182
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||| |||||| |||| || |||||||||||||    
T  44284132 cttatgaaaacagtttgactttgttttattttttgttatagaaatagctta 44284182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 53706035 - 53705981
Alignment:
Q  317 tgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    |||||||||||||| || ||| |||| ||| ||||||||||||||||||||||||    
T  53706035 tgtgtaacaagtagccaaaatagtccctcactgtatcgaaatttcaaaatagtcc 53705981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1395665 - 1395617
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| | ||||||||||||||||||||| || |||||||||||||    
T  1395665 tatgaaaataatttgactttattttatcttttgttatagaaatagctta 1395617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 14984407 - 14984486
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    |||||||||| |||||||  | ||||||||| |||||||| ||| |||| ||| | |||||||||||||||||| ||||||    
T  14984407 taatagtcattttggtcct-gaatgtgtaacgagtagtcacaatagtccctcaatatatcgaaatttcaaaatactccctg 14984486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 15304423 - 15304471
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||| ||||||||||||||||| || |||||||||||||    
T  15304423 tatgaaaacaatttaactttattttatcttttgttatagaaatagctta 15304471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 20192682 - 20192730
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| |||||||||||||||||||||| || || ||||||||||    
T  20192682 tatgaaaactgtttgactttattttatcttttgttatataaatagctta 20192730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 21872213 - 21872269
Alignment:
Q  86 atgtttggattgacttatatgatcttatcaactgaaataatcacttgcgagactgtt 142  Q
    ||||||||||| |||||| |||||||||| ||||| |||| |||||| |||||||||    
T  21872213 atgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtt 21872269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 22232820 - 22232772
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||||| ||| || || ||||||||||    
T  22232820 tatgaaaacagtttgactttattttatcatttgttatataaatagctta 22232772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 24887359 - 24887407
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| |||||||||||||||||||||| || || |||||||||||||    
T  24887359 tatgaatacagtttgactttattttatctattgttatagaaatagctta 24887407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 32703132 - 32703084
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  32703132 tatgaaaacaatttgagtttattttatcttttataatagaaatagctta 32703084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 905058 - 905109
Alignment:
Q  225 ttgactttattttatcttttattgtagaaatagcttacatttaagggcttat 276  Q
    |||||||||||||||||||| || ||||||||||||| | ||||| ||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatacttaagcgcttat 905109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 36646387 - 36646426
Alignment:
Q  173 tgtccataagttgttttcatcttatttctatagactctct 212  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  36646387 tgtccataagctgttttcatcttatttctataaactctct 36646426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 51278234 - 51278281
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||| || |||| || |||||||||||||    
T  51278234 atgaaaacagtttgactttatttaatattttgttatagaaatagctta 51278281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 1816573 - 1816543
Alignment:
Q  217 aaaacagtttgactttattttatcttttatt 247  Q
    |||||||||||||||||||||||||||||||    
T  1816573 aaaacagtttgactttattttatcttttatt 1816543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 41028929 - 41028975
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| ||||||||||||| |||||| || |||||||||||||    
T  41028929 tgaaaacagattgactttattttttcttttgttatagaaatagctta 41028975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 8355085 - 8355044
Alignment:
Q  395 tattgtcatattagtccttcaatataattgcttattttcatc 436  Q
    ||||||||||| ||||||||||||||| | ||||||||||||    
T  8355085 tattgtcatatcagtccttcaatataagtacttattttcatc 8355044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 12923404 - 12923449
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| |||||||||||||||||||||||||||  || |||||||||    
T  12923404 gaaagcagtttgactttattttatcttttattacagcaatagctta 12923449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 31186452 - 31186505
Alignment:
Q  318 gtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    |||||||||||||| | ||| ||| |||| |||||| |||||||||||||||||    
T  31186452 gtgtaacaagtagttacaatagtctttcaatgtatcaaaatttcaaaatagtcc 31186505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 36101559 - 36101514
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| |||||||||||||||||||||| ||||  ||||||||||||    
T  36101559 gaaatcagtttgactttattttatcttatattacagaaatagctta 36101514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 36139869 - 36139824
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| |||||||||||||||||||||| ||||  ||||||||||||    
T  36139869 gaaatcagtttgactttattttatcttatattacagaaatagctta 36139824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 435
Target Start/End: Complemental strand, 40954542 - 40954485
Alignment:
Q  378 ttaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||| | ||||||||||||||||||  ||||||||| || |||||| ||||    
T  40954542 ttaaaataattttttaatattgtcatattagtgtttcaatatacttacttattgtcat 40954485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 46848476 - 46848399
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtcc 371  Q
    |||||||||  |||||||| | ||||||||  |||||||| ||| || | ||| |||||| |||||||||||||||||    
T  46848476 taatagtcactttggtccctgaatgtgtaatgagtagtcaaaatagttcctcaatgtatcaaaatttcaaaatagtcc 46848399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 53457372 - 53457323
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| ||||||||||||||||||||||| || | ||| |||||||    
T  53457372 ttatgaaaatagtttgactttattttatcttttgttatcgaagtagctta 53457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 621963 - 621886
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccct 373  Q
    |||||||||  |||||| | | ||||||||  |||||||||||| |||  ||| |||||| |||||||||||||||||||    
T  621963 taatagtcactttggtctctgaatgtgtaatgagtagtcataatagtc--tcaatgtatcaaaatttcaaaatagtccct 621886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 2128331 - 2128375
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||| ||||||||||||||||| || |||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagctta 2128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 420
Target Start/End: Original strand, 3941675 - 3941703
Alignment:
Q  392 taatattgtcatattagtccttcaatata 420  Q
    |||||||||||||||||||||||||||||    
T  3941675 taatattgtcatattagtccttcaatata 3941703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 8007771 - 8007819
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| ||||||||||||||| |||||||||| || |||||| ||||||    
T  8007771 tatgataacagtttgactttactttatcttttgttatagaaacagctta 8007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 10101552 - 10101600
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||| ||||||||||||||||| || |||||||| ||||    
T  10101552 tatgaaaacaatttaactttattttatcttttgttatagaaataactta 10101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 10212477 - 10212525
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||| ||||||||||||||||| || |||||||| ||||    
T  10212477 tatgaaaacaatttaactttattttatcttttgttatagaaataactta 10212525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 20143918 - 20143871
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  20143918 tatgaaaatagtttgactt-attttatcttttattatagaaataactta 20143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 23269271 - 23269318
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  23269271 tatgaaaatagtttgactt-attttatcttttattatagaaataactta 23269318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 23785249 - 23785201
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||||||||||||||||||||||| |  |||||||||| ||||    
T  23785249 tatgaatacagtttgactttattttatcttctgctgtagaaataactta 23785201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 27792866 - 27792818
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||||| |||||||||||||| || | |||||||||||    
T  27792866 tatgaaaatagtttgaccttattttatcttttgtttttgaaatagctta 27792818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 28306152 - 28306104
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||  |||| || |||| ||||||||    
T  28306152 tatgaaaacagtttgactttattttactttttgttatagagatagctta 28306104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 31337481 - 31337521
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||||| || |||| ||||    
T  31337481 aaaacagtttgactttattttatcttttgttttagagatag 31337521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 34954077 - 34954033
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||| |||||||||||||||||| | || |||||||||    
T  34954077 tatgaaaacagcttgactttattttatcttgtgttatagaaatag 34954033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 42809295 - 42809247
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||| ||| ||||||||||||| || |||||||||||||    
T  42809295 tatgaaaacaatttaactatattttatcttttgttatagaaatagctta 42809247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 43397821 - 43397773
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||| |||||||| ||| ||||| ||||| ||||    
T  43397821 tatgaaaacagtttgacttgattttatcgtttgttgtaaaaataactta 43397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 44374720 - 44374768
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||||||| ||  ||| ||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagctta 44374768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 48323811 - 48323767
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||||||||||| |||||||||||| |||||||| ||||    
T  48323811 aaaacaatttgactttatattatcttttattatagaaataactta 48323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 48397636 - 48397592
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| |||||||||||||||||||||||| || ||||| ||||    
T  48397636 aaaacaatttgactttattttatcttttattataaaaataactta 48397592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 14295500 - 14295454
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagct 259  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  14295500 tatgaaaacagtttgactttattttatcttttgttatagaaatagct 14295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 28586842 - 28586886
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||||||||| || |||||||||    
T  28586842 tatgaaaacagtttgactttattttatcttttgttatagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 7096201 - 7096251
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||  |||||||||||||||||||||| || |||||||||||||    
T  7096201 cttatgaaaatggtttgactttattttatcttttgttatagaaatagctta 7096251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 7756429 - 7756486
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccct 373  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||  ||| ||||||||    
T  7756429 atgtgtaagaagtagtcagaatggtccttgattgtatcgaaattataaattagtccct 7756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 38831535 - 38831580
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||||||||   ||||||||||||    
T  38831535 gaaaacagtttgactttattttatcttttataacagaaatagctta 38831580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 29117009 - 29117049
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaata 256  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  29117009 gaaaacagtttgactttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 35135738 - 35135786
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||||||||||||||||||||| || |||||||| ||||    
T  35135738 tatgaaaatagtttgactttattttatcttttgttatagaaatatctta 35135786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 37063150 - 37063194
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||| ||||||||||||||||||||||| || |||||||||    
T  37063150 tatgaaaatagtttgactttattttatcttttgttatagaaatag 37063194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 1943241 - 1943202
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaata 256  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  1943241 aaaacagtttaactttattttatcttttattatagaaata 1943202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 8206301 - 8206226
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    |||||||||||| || ||  |||||||||   |||||||||||||||| |||||||||||| || |||||| ||||    
T  8206301 tcaaaatagtccttgacaacaaaataattcattaatattgtcatattaatccttcaatatacttacttattatcat 8206226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 10303794 - 10303751
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||| ||||||||||||||||||||| || |||||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaatag 10303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 10363743 - 10363696
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| ||| ||||||||||||||||| || |||||||||||||    
T  10363743 atgaaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 12407738 - 12407785
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| || ||||||||||||||||| || |||||||||||||    
T  12407738 atgaaaacagatttactttattttatcttttgttatagaaatagctta 12407785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 257
Target Start/End: Complemental strand, 35960399 - 35960364
Alignment:
Q  222 agtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||| |||||||||    
T  35960399 agtttgactttattttatcttttattatagaaatag 35960364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 465944 - 465882
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttacatttaagggcttatcat 279  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||| || |||| |||||||||    
T  465944 aaaacaatttaactttattttatcttttgtcatagaaatagcttatatataagtgcttatcat 465882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 8206377 - 8206319
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccctg 374  Q
    |||||||| |||||||||| || |||||| | ||||||||||||| | |||||||||||    
T  8206377 atgtgtaataagtagtcatgatagtcctttaatgtatcgaaattttataatagtccctg 8206319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 41277426 - 41277456
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttt 243  Q
    |||||||||||||||||||||||||||||||    
T  41277426 tatgaaaacagtttgactttattttatcttt 41277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 583849 - 583878
Alignment:
Q  213 tatgaaaacagtttgactttattttatctt 242  Q
    ||||||||||||||||||||||||||||||    
T  583849 tatgaaaacagtttgactttattttatctt 583878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 244
Target Start/End: Complemental strand, 985625 - 985596
Alignment:
Q  215 tgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||    
T  985625 tgaaaacagtttgactttattttatctttt 985596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 11054165 - 11054132
Alignment:
Q  228 actttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||| |||||||||||||    
T  11054165 actttattttatcttttattatagaaatagctta 11054132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 14460126 - 14460085
Alignment:
Q  394 atattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||||||||||||||||||| || |||||| ||||    
T  14460126 atattgtcatattagtccttcaatatatttacttattgtcat 14460085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 17369354 - 17369309
Alignment:
Q  87 tgtttggattgacttatatgatcttatcaactgaaataatcacttg 132  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||||||    
T  17369354 tgtttggattgacttatttgaacttatctactgacataatcacttg 17369309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 28578883 - 28578838
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||||||||||||||| | || |||||||||||||    
T  28578883 gaaaacagcttgactttattttatcttatgttatagaaatagctta 28578838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 32059665 - 32059694
Alignment:
Q  213 tatgaaaacagtttgactttattttatctt 242  Q
    ||||||||||||||||||||||||||||||    
T  32059665 tatgaaaacagtttgactttattttatctt 32059694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 37618913 - 37618962
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctt 260  Q
    |||||| ||||||||||| || ||||||||||||||  ||||||||||||    
T  37618913 cttatgtaaacagtttgatttcattttatcttttataatagaaatagctt 37618962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 917264 - 917188
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtc 370  Q
    |||||||||| ||||| || | ||||||||  | |||||| ||| |||| ||| ||||||||||||| |||||||||    
T  917264 taatagtcattttggttcctgaatgtgtaaatattagtcacaatcgtccctcaatgtatcgaaattttaaaatagtc 917188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 9023426 - 9023366
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||||||  |||| ||||| ||   | |||||||||||||||||||||||||||    
T  9023426 tcaaaatagtccctaacattcaaatacttcattgatattgtcatattagtccttcaatata 9023366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 10280657 - 10280697
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    |||||||||||||||||| |||||||| || ||||||||||    
T  10280657 aaacagtttgactttattctatcttttgttatagaaatagc 10280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 19177473 - 19177429
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||||    
T  19177473 tatgaaaacagttagacttaattttatcttctgttgtagaaatag 19177429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 20982211 - 20982259
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| | |||||||||||||||| ||| || |||||||||||||    
T  20982211 tatgaaaacgggttgactttattttatcctttgttatagaaatagctta 20982259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 37968885 - 37968837
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| |||||| | |||||||||||| || |||||||||||||    
T  37968885 tatgaaaacactttgacctcattttatcttttgttatagaaatagctta 37968837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 32098382 - 32098432
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  32098382 cttatgaaaacactttgactttattttatcttttgttatagaaatagctta 32098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 17952777 - 17952825
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||||||||||||||||||||| || |||||||||||||    
T  17952777 tatgaaaatagtttgactttattttatcttttgttatagaaatagctta 17952825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 28251950 - 28252009
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttacatttaagggcttat 276  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||  |||||| ||||||    
T  28251950 aaaacagtttgactttattttattttgtatggtagaaatagcttaattttaagcgcttat 28252009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 7283076 - 7282964
Alignment:
Q  158 aaacaagttataatgtgtccataagttgttttcatcttatttctatagactctc---------ttatgaaaacagtttgactttattttatcttttattg 248  Q
    |||||| |||| || ||||||||||||||||||||||||| || |||  |||||         |||||||||||||||||||| ||||| |||||| ||     
T  7283076 aaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacagtttgacttcattttttcttttctta 7282977  T
Q  249 tagaaatagctta 261  Q
    || ||||||||||    
T  7282976 taaaaatagctta 7282964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 14209271 - 14209223
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||| ||||||||||||||| || | |||||||||||    
T  14209271 tatgaaaacagtttgaatttattttatcttttgttattgaaatagctta 14209223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 22878250 - 22878194
Alignment:
Q  86 atgtttggattgacttatatgatcttatcaactgaaataatcacttgcgagactgtt 142  Q
    |||||||||||||||||| ||| |||||| ||||| |||| |||||| |||||||||    
T  22878250 atgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtt 22878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 33192187 - 33192143
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||||||||||||||||||||| | || |||||||||    
T  33192187 tatgaaaacagtttgactttattttatcttatgttatagaaatag 33192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 33944599 - 33944551
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| |||||||||||||||| |||||||  ||||||||||||    
T  33944599 tatgaaaacaatttgactttattttatattttattcaagaaatagctta 33944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 40837504 - 40837552
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| |||||||||| |||||||||| || |||||||||||||    
T  40837504 tatgaaaacaatttgactttaatttatcttttgttatagaaatagctta 40837552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 15301595 - 15301520
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||| ||| |||||||||| ||   |||||||||| ||||||| |||||||||| || |||||| ||||    
T  15301595 tcaaaatagtctctgacattaaaatacttcgttaatattgtcttattagtacttcaatatacttacttattatcat 15301520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 435
Target Start/End: Original strand, 15816905 - 15816948
Alignment:
Q  392 taatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||||||||||||||||| ||| || |||||||||||    
T  15816905 taatattgtcatattagtccttcaagatacttacttattttcat 15816948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 31740035 - 31740082
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctt 260  Q
    |||||||| ||||||||||||||||||||||  || ||||||||||||    
T  31740035 tatgaaaatagtttgactttattttatctttagttatagaaatagctt 31740082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 37034041 - 37033994
Alignment:
Q  210 tcttatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||||  |||||||||||||||||||||| || |||||||||    
T  37034041 tcttatgaaaatcgtttgactttattttatctttttttatagaaatag 37033994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 5043636 - 5043666
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttt 243  Q
    |||||||||||||||||||||||||||||||    
T  5043636 tatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 7165662 - 7165732
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    |||||||||||| |  |||||||||||||   ||||||| ||||||||||| ||||||||| || ||||||    
T  7165662 tcaaaatagtccttaacattaaaataatttgttaatattttcatattagtctttcaatatacttacttatt 7165732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 18962114 - 18962160
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagct 259  Q
    |||||||||||||| ||||||||||||||||| || || ||||||||    
T  18962114 tatgaaaacagtttaactttattttatcttttgttataaaaatagct 18962160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 244
Target Start/End: Complemental strand, 33942143 - 33942113
Alignment:
Q  214 atgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||||    
T  33942143 atgaaaacagtttgactttattttatctttt 33942113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 6788570 - 6788517
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagt 369  Q
    ||||||||||| |||||||||| ||| |||| |||||| |||||| ||||||||    
T  6788570 atgtgtaacaaatagtcataatagtcattcaatgtatcaaaattttaaaatagt 6788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 11513892 - 11513855
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgta 250  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  11513892 tatgaaaacaatttgactttattttatcttttgttgta 11513855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 258
Target Start/End: Complemental strand, 29300623 - 29300594
Alignment:
Q  229 ctttattttatcttttattgtagaaatagc 258  Q
    ||||||||||||||||||||||||||||||    
T  29300623 ctttattttatcttttattgtagaaatagc 29300594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 244
Target Start/End: Original strand, 29429835 - 29429864
Alignment:
Q  215 tgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||||||||||||||||||||||    
T  29429835 tgaaaacagtttgactttattttatctttt 29429864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 31461421 - 31461384
Alignment:
Q  224 tttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||| || |||||||||||||    
T  31461421 tttgactttattttatcttttgttatagaaatagctta 31461384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 34054977 - 34055022
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    |||| |||||||||| |||||||||||||||| || ||||||||||    
T  34054977 tatgtaaacagtttgcctttattttatcttttgttatagaaatagc 34055022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 420
Target Start/End: Original strand, 41746423 - 41746484
Alignment:
Q  359 ttcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    |||||||||||| ||  |||||||||| ||   ||||||||||||||||| |||||||||||    
T  41746423 ttcaaaatagtctctaacattaaaatacttcattaatattgtcatattagcccttcaatata 41746484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 1939408 - 1939456
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||| ||||||||||||||||| || |||||||| ||||    
T  1939408 tatgaaaatagtttcactttattttatcttttgttatagaaataactta 1939456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 3458651 - 3458603
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||||||||||||||||||||| || || ||||| ||||    
T  3458651 tatgaaaaaagtttgactttattttatcttttgttataaaaataactta 3458603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 5133762 - 5133718
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||  |||||||||||||||| || |||||||||||||    
T  5133762 aaaacagtttatctttattttatcttttgttatagaaatagctta 5133718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 5511559 - 5511511
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||||||||||||||| ||| ||| |||||||| ||||    
T  5511559 tatgaaaaaagtttgactttattttatatttcattatagaaataactta 5511511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 9551569 - 9551525
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||  |||||| || ||||||||||    
T  9551569 aaaacagtttgactttattttataatttattataaaaatagctta 9551525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 10143162 - 10143118
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||| |||||||||||| || |||||||| ||||    
T  10143162 aaaacagtttgacttaattttatcttttgttatagaaataactta 10143118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 11344360 - 11344408
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||| ||||||||||| || |||||||| ||||    
T  11344360 tatgaaaacaatttgactttcttttatcttttgttatagaaatatctta 11344408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 25609778 - 25609742
Alignment:
Q  225 ttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||| || |||||||||||||    
T  25609778 ttgactttattttatcttttcttatagaaatagctta 25609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 27288622 - 27288586
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagaaa 254  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  27288622 aaacagtttgattttattttatcttttattatagaaa 27288586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 28803582 - 28803630
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||| |||||||||||||||||||||||| || | |||||| ||||    
T  28803582 tatgaaatcagtttgactttattttatcttttgttatcgaaataactta 28803630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 31967466 - 31967526
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||||||  |||| ||||| ||   | |||||||||||||||||||||||||||    
T  31967466 tcaaaatagtccctaacattcaaatacttcattgatattgtcatattagtccttcaatata 31967526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 33256734 - 33256706
Alignment:
Q  213 tatgaaaacagtttgactttattttatct 241  Q
    |||||||||||||||||||||||||||||    
T  33256734 tatgaaaacagtttgactttattttatct 33256706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 37053588 - 37053544
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||||||||||||||||||| || | || |||||||||    
T  37053588 tatgaaaacagtttgactttattttattttctgttatagaaatag 37053544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 40759013 - 40758969
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||||||||||||||||||||| || | |||||||||||    
T  40759013 aaaacaatttgactttattttatcttttgttatggaaatagctta 40758969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 44438919 - 44438967
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttacatt 265  Q
    ||||||||||||||||||||||||||||  |   |||||||||||||||    
T  44438919 aaaacagtttgactttattttatcttttgctacggaaatagcttacatt 44438967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 12835013 - 12835058
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||    
T  12835013 tatgaaaacaatttgactttattttatcttttgttgtagaaatagc 12835058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 33601167 - 33601212
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaata 256  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  33601167 cttatgaaaacagtttgactttattttattttttagtgtagaaata 33601212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 5006585 - 5006633
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||    
T  5006585 tatgaaaacagtttgactttattttatcttttgttataggaatagctta 5006633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 3241438 - 3241388
Alignment:
Q  210 tcttatgaaaacagtttgactttattttatcttttattgtagaaatagctt 260  Q
    |||||||||||||||||||||||||||| | |||| || ||||||||||||    
T  3241438 tcttatgaaaacagtttgactttattttttattttgttatagaaatagctt 3241388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 7244698 - 7244648
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  7244698 cttatgaaaacagtttgactttcttttatcttttgatatagaaatagctta 7244648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 30456526 - 30456572
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagct 259  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||    
T  30456526 tatgaaaacaatttgactttattttatcttttgttttagaaatagct 30456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 3610820 - 3610864
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||    
T  3610820 aaaacagtttgccttcattttatcttttgttgtagaaatagctta 3610864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 3802215 - 3802263
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||  ||||||||||||||| |||||||| |||||||||||||    
T  3802215 tatgaaaacgatttgactttattttaccttttattatagaaatagctta 3802263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 5362342 - 5362402
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    |||||||||||||||  ||||||||| ||   |||||| ||||||||||||||||||||||    
T  5362342 tcaaaatagtccctgatattaaaatacttcgttaatatggtcatattagtccttcaatata 5362402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 27121662 - 27121710
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||| |||||| |||||||| ||||    
T  27121662 tatgaaaacaatttgactttattttatcatttattatagaaatatctta 27121710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 28178963 - 28178915
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| | ||||||||||||||||||| || |||||||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagctta 28178915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 30160965 - 30160997
Alignment:
Q  212 ttatgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||||||    
T  30160965 ttatgaaaacagtttgactttattttatctttt 30160997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 33894616 - 33894569
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||    
T  33894616 tatgaaaacagtttgactt-attttatcttttgttatagaaatagctta 33894569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 35536101 - 35536053
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||||| | || |||||||||||||    
T  35536101 tatgaaaacaatttgactttattttatcttatgttatagaaatagctta 35536053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 39591543 - 39591591
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||||||| || |||||||| ||||    
T  39591543 tatgaaaacaatttgactttattttatcttttgttatagaaataactta 39591591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 42656498 - 42656446
Alignment:
Q  224 tttgactttattttatcttttattgtagaaatagcttacatttaagggcttat 276  Q
    ||||||||||||||||||||| || ||||||||||||| || |||| ||||||    
T  42656498 tttgactttattttatcttttgttatagaaatagcttatatataagtgcttat 42656446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 45593795 - 45593843
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||| |||| ||  ||||||||||||    
T  45593795 tatgaaaacagtttgactttattttatgttttgttacagaaatagctta 45593843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 11208443 - 11208380
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagcttacatttaagggcttat 276  Q
    ||||||||| |||||| ||||||||||||||| |||||||| || |||| || |||| ||||||    
T  11208443 tatgaaaacggtttgagtttattttatcttttgttgtagaattatcttatatataagcgcttat 11208380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 28340473 - 28340520
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||  ||| ||| ||||||||||||    
T  28340473 atgaaaacagtttgactttattttattgtttgttgaagaaatagctta 28340520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 33601794 - 33601833
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaata 256  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  33601794 aaaacagtttgactttattttattttttagtgtagaaata 33601833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 47004077 - 47004030
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagcttacat 264  Q
    |||| |||||||||||||||||||| || || ||||||||||||||||    
T  47004077 aaaatagtttgactttattttatctattgttatagaaatagcttacat 47004030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 47046184 - 47046227
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaata 256  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||    
T  47046184 tatgaaaacaatttgactttattttatcctttgttgtagaaata 47046227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 31338498 - 31338468
Alignment:
Q  217 aaaacagtttgactttattttatcttttatt 247  Q
    |||||||||||||||||||||||||||||||    
T  31338498 aaaacagtttgactttattttatcttttatt 31338468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 32996259 - 32996313
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtc 370  Q
    |||||||| || |||| |||||| ||||||| ||||||||||||| |||||||||    
T  32996259 atgtgtaataaatagttataatgatccttcaatgtatcgaaatttaaaaatagtc 32996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 9527166 - 9527211
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagc 258  Q
    ||||||||||||||||||||||| |||||||| || |||| |||||    
T  9527166 tatgaaaacagtttgactttattatatcttttgttatagatatagc 9527211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 12927891 - 12927834
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccct 373  Q
    ||||||| |||||||||| ||| |||||||  |||||| ||||| |||||||||||||    
T  12927891 atgtgtagcaagtagtcacaatagtccttcgatgtatcaaaattccaaaatagtccct 12927834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 29363512 - 29363483
Alignment:
Q  213 tatgaaaacagtttgactttattttatctt 242  Q
    ||||||||||||||||||||||||||||||    
T  29363512 tatgaaaacagtttgactttattttatctt 29363483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 30134040 - 30133995
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||  |||||||||||||||||||| ||||| ||||||||||    
T  30134040 gaaaacaagttgactttattttatcttttgttgtaaaaatagctta 30133995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 396285 - 396332
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagaaatagctt 260  Q
    |||||||||||||||||| |||||||||||||| || || |||||||||    
T  396285 ttatgaaaacagtttgac-ttattttatcttttgttatataaatagctt 396332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 1417258 - 1417214
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||| ||||||||||||||||||||| || || ||||||    
T  1417258 tatgaaaacaatttgactttattttatcttttgttatataaatag 1417214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 2727436 - 2727480
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||| |||||| |||||||||||||||| || |||||||||    
T  2727436 tatgaaaagagtttgcctttattttatcttttgttatagaaatag 2727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 2999181 - 2999141
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||| |||||||||||||||||||||| || |||||||||    
T  2999181 aaaacggtttgactttattttatcttttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 8062789 - 8062849
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    |||||||||||| |  |||||||||||||   ||||||||||||||||||| || ||||||    
T  8062789 tcaaaatagtccataacattaaaataatttgttaatattgtcatattagtcttttaatata 8062849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 31341180 - 31341140
Alignment:
Q  221 cagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||||||| || || ||||||||||    
T  31341180 cagtttgactttattttatcttttgttatacaaatagctta 31341140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 420
Target Start/End: Original strand, 32996367 - 32996395
Alignment:
Q  392 taatattgtcatattagtccttcaatata 420  Q
    |||||||||||||||||||||||||||||    
T  32996367 taatattgtcatattagtccttcaatata 32996395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 39551624 - 39551672
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||| |||||| | |||||||| || |||||||||||||    
T  39551624 tatgaaaacagttttactttagtatatcttttgttatagaaatagctta 39551672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 43152982 - 43153026
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||| ||||||||||||||||| || |||||||||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagctta 43153026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 43318604 - 43318652
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| |||| ||||||||||||||||| ||| || |||||||||||||    
T  43318604 tatgataacaatttgactttattttatcatttgttatagaaatagctta 43318652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 44239055 - 44239087
Alignment:
Q  212 ttatgaaaacagtttgactttattttatctttt 244  Q
    ||||||||||| |||||||||||||||||||||    
T  44239055 ttatgaaaacattttgactttattttatctttt 44239087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 45813256 - 45813304
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||  ||||||||||||||||||||  | |||||||||||||    
T  45813256 tatgaaaacaagttgactttattttatcttttggtatagaaatagctta 45813304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 46825092 - 46825052
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaa 253  Q
    |||||||||| ||||||||||||||||||||| || |||||    
T  46825092 tatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 47616704 - 47616736
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttt 243  Q
    ||||||||||||||||||||||||| |||||||    
T  47616704 cttatgaaaacagtttgactttattctatcttt 47616736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 33527223 - 33527271
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||||    
T  33527223 tatgaaaacagtttgactgtattttatcttttgttttagaaatagctta 33527271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 15360888 - 15360845
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaata 256  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  15360888 tatgaaaacagtttgactttattttatcttttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 14737779 - 14737829
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| ||||||||||||||||||||| || |||||||| ||||    
T  14737779 cttatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 42550237 - 42550187
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||| ||||||||||||||||||||||||| |||||| |||||||    
T  42550237 cttatggaaaaagtttgactttattttatcttttatcgtagaactagctta 42550187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 50319288 - 50319238
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||  |||||||||||||||||||| || |||||||||||||    
T  50319288 cttatgaaaacaacttgactttattttatcttttgttatagaaatagctta 50319238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 16192328 - 16192275
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagt 369  Q
    ||||||||||||||||||||||  ||||||| |||||| |||||| ||||||||    
T  16192328 atgtgtaacaagtagtcataatattccttcaatgtatcaaaattttaaaatagt 16192275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 17631178 - 17631223
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagct 259  Q
    |||||||||||| |||||||||||||||||| || |||||||||||    
T  17631178 atgaaaacagttagactttattttatcttttgttatagaaatagct 17631223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 27738256 - 27738297
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaa 254  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  27738256 tatgaaaacaatttgactttattttatcttttgttgtagaaa 27738297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 33747291 - 33747340
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaa 365  Q
    |||||||||||||||||| ||| || ||||| ||||||||||||||||||    
T  33747291 atgtgtaacaagtagtcacaatagttcttcaatgtatcgaaatttcaaaa 33747340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 23373364 - 23373412
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagct 259  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||    
T  23373364 cttatgaaaacagattgactttattttatcttttgatatagaaatagct 23373412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 23895330 - 23895282
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  23895330 tatgagaacagtttgaatttattttatcttttgttatagaaatagctta 23895282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 34380439 - 34380391
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| |||||||||||||||||| |||||||| || |||||||||||||    
T  34380439 tatgcaaacagtttgactttattgtatcttttgttttagaaatagctta 34380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 42351980 - 42352032
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagcttaca 263  Q
    |||||||||| ||||||||||||||||| ||||| || ||||||||| |||||    
T  42351980 cttatgaaaatagtttgactttattttaacttttgttatagaaatagattaca 42352032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 45234192 - 45234148
Alignment:
Q  212 ttatgaaaacagtttgactttattttatcttttattgtagaaata 256  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||    
T  45234192 ttatgaaaataatttgactttattttatcttttattatagaaata 45234148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 45999364 - 45999412
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||| |||||||||||||| ||||||||| || |||||||||||||    
T  45999364 tatgaaagcagtttgactttatcttatcttttgttatagaaatagctta 45999412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 46499934 - 46499978
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||| ||||||||||||||||||||| || |||||||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagctta 46499978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 435
Target Start/End: Original strand, 6541134 - 6541177
Alignment:
Q  392 taatattgtcatattagtccttcaatataattgcttattttcat 435  Q
    ||||||||||||||||||||||||||||| || |||||| ||||    
T  6541134 taatattgtcatattagtccttcaatatacttacttattgtcat 6541177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 35080146 - 35080209
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagcttacatttaagggcttat 276  Q
    |||| |||||||||||||||||||||| |||| || ||||||| ||||| || |||||| ||||    
T  35080146 tatggaaacagtttgactttattttattttttgttatagaaattgcttatatataagggtttat 35080209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 40943465 - 40943508
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||    
T  40943465 aaacagtttgactttattttatcttttgttgtagagatatctta 40943508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 43029482 - 43029521
Alignment:
Q  218 aaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  43029482 aaacagtttgaatttattttatcttttgttgtagaaatag 43029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 49517063 - 49517016
Alignment:
Q  214 atgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||| ||||||||||||||||||||| || |||||||| ||||    
T  49517063 atgaaaacaatttgactttattttatcttttgttatagaaataactta 49517016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 7200928 - 7200966
Alignment:
Q  223 gtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  7200928 gtttgactttattttatcttttattatggaaatagctta 7200966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 244
Target Start/End: Original strand, 12477364 - 12477394
Alignment:
Q  214 atgaaaacagtttgactttattttatctttt 244  Q
    |||||||||||||||||||||||||||||||    
T  12477364 atgaaaacagtttgactttattttatctttt 12477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 19464237 - 19464287
Alignment:
Q  316 atgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaat 366  Q
    |||||||||||||||||| ||| |||||||| |||||| |||||| |||||    
T  19464237 atgtgtaacaagtagtcacaatagtccttcaatgtatcaaaatttaaaaat 19464287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 26293180 - 26293230
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||| |||||||||||||||  |||| || |||||||||||||    
T  26293180 cttatgaaaacaatttgactttattttactttttgttatagaaatagctta 26293230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 28077121 - 28077171
Alignment:
Q  211 cttatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||| ||| ||||||||||  || |||||||||||||    
T  28077121 cttatgaaaacagtttgattttcttttatctttggttatagaaatagctta 28077171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 31517816 - 31517862
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagct 259  Q
    ||||||| || ||| ||||||||||||||||| ||||||||||||||    
T  31517816 tatgaaatcaatttaactttattttatcttttgttgtagaaatagct 31517862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 32670086 - 32670016
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaa 364  Q
    |||||||||| ||| |||| | ||||||||| |||| ||| ||| |||||||| || ||||||||||||||    
T  32670086 taatagtcattttgatccctgaatgtgtaacgagtattcacaatagtccttcaatggatcgaaatttcaaa 32670016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 49880237 - 49880167
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatataattgcttatt 430  Q
    ||||||||||||||  |||||||||| ||   | ||||||||||||||||| ||||||||| || ||||||    
T  49880237 tcaaaatagtccctaacattaaaatacttcattgatattgtcatattagtctttcaatatacttacttatt 49880167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 15437955 - 15437910
Alignment:
Q  215 tgaaaacagtttgactttattttatcttttattgtagaaatagctt 260  Q
    ||||||||||||||||| ||||||| |||| || ||||||||||||    
T  15437955 tgaaaacagtttgacttaattttattttttgttatagaaatagctt 15437910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 36151584 - 36151629
Alignment:
Q  216 gaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||| ||||||||||||||||||||| || | |||||||||||    
T  36151584 gaaaacaatttgactttattttatcttttgttattgaaatagctta 36151629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 44251397 - 44251364
Alignment:
Q  228 actttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||||||||| |||||||||||||    
T  44251397 actttattttatcttttattatagaaatagctta 44251364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 4699692 - 4699736
Alignment:
Q  217 aaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||| ||||||||||||||| ||||| | ||||||||||||||||    
T  4699692 aaaatagtttgactttatttaatcttgtgttgtagaaatagctta 4699736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 5756762 - 5756810
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||| ||||||| | ||||||| || |||||||||||||    
T  5756762 tatgaaaacagtttaactttatatcatcttttgttatagaaatagctta 5756810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 6074468 - 6074420
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||||||| ||||||| | ||||||| || |||||||||||||    
T  6074468 tatgaaaacagtttaactttatatcatcttttgttatagaaatagctta 6074420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 7218150 - 7218194
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||| ||||||||||||||| |||||||| | |||||||    
T  7218150 tatgaaaacaatttgactttattttaccttttattatggaaatag 7218194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 420
Target Start/End: Original strand, 9890650 - 9890678
Alignment:
Q  392 taatattgtcatattagtccttcaatata 420  Q
    |||||||||||||||||||||||||||||    
T  9890650 taatattgtcatattagtccttcaatata 9890678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 15942823 - 15942871
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||||  |||||||||||||||||| |||  |||||||||||||    
T  15942823 tatgaaaacaaattgactttattttatcttgtataatagaaatagctta 15942871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 17628593 - 17628549
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    |||||||||| |||||||||| ||||||||||| | |||||||||    
T  17628593 tatgaaaacaatttgactttactttatcttttaatatagaaatag 17628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 25719528 - 25719480
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||| ||||||||| ||||||||||  ||||||||||||    
T  25719528 tatgaaaatagttttactttatttcatcttttattacagaaatagctta 25719480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 30519042 - 30519114
Alignment:
Q  299 gtcatgttggtcccaggatgtgtaacaagtagtc-ataatggtccttcattgtatcgaaatttcaaaatagtc 370  Q
    ||||| |||||||  | ||||||||||| ||||| | ||| |||||| | |||||||||||||||||||||||    
T  30519042 gtcattttggtccttgaatgtgtaacaaatagtccacaatagtccttaaatgtatcgaaatttcaaaatagtc 30519114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 30815711 - 30815759
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| ||||| ||||||||||||||||| || |||||| ||||||    
T  30815711 tatgaaaatagtttaactttattttatcttttgttatagaaaaagctta 30815759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 38867909 - 38867957
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||| |||||||  | |||||||||||||    
T  38867909 tatgaaaacattttgactttatttaatcttttggtatagaaatagctta 38867957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 39777657 - 39777613
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatag 257  Q
    ||||||| ||||||||||||||| |||||||| || |||||||||    
T  39777657 tatgaaagcagtttgactttattctatcttttgttatagaaatag 39777613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 45107616 - 45107569
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||| |||||||||||||||||| |||| || |||||||||||||    
T  45107616 tatgaaaatagtttgactttattttat-ttttcttatagaaatagctta 45107569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 52286672 - 52286624
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||||||  |||| ||||||||||||||||| ||||||||||| ||||    
T  52286672 tatgaaaattgtttaactttattttatcttttgttgtagaaatatctta 52286624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 1150 - 1198
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| || ||||||||||||||||||||||| || |||||||||||||    
T  1150 tatgagaatagtttgactttattttatcttttgttatagaaatagctta 1198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 2825 - 2777
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    ||||| || ||||||||||||||||||||||| || |||||||||||||    
T  2825 tatgagaatagtttgactttattttatcttttgttatagaaatagctta 2777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 6547 - 6469
Alignment:
Q  294 taatagtcatgttggtcccaggatgtgtaacaagtagtcataatggtccttcattgtatcgaaatttcaaaatagtccc 372  Q
    |||||||||| || || || | ||||||||  | |||||||||| |||||||| || ||| ||||||||||||||||||    
T  6547 taatagtcattttagtacctgaatgtgtaatgaatagtcataatagtccttcaatgaatcaaaatttcaaaatagtccc 6469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 20633 - 20691
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaata 418  Q
    |||||||||||  ||| ||||||||| ||   |||||||||||||||||||||||||||    
T  20633 tcaaaatagtcattgttattaaaatatttcattaatattgtcatattagtccttcaata 20691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 2465 - 2525
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||||||  |||| ||||| ||   | |||||||||||||||||||||||||||    
T  2465 tcaaaatagtccctaacattcaaatacttcattgatattgtcatattagtccttcaatata 2525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 35099 - 35039
Alignment:
Q  360 tcaaaatagtccctgtcattaaaataattatgtaatattgtcatattagtccttcaatata 420  Q
    ||||||||||||||  |||| ||||| ||   | |||||||||||||||||||||||||||    
T  35099 tcaaaatagtccctaacattcaaatacttcattgatattgtcatattagtccttcaatata 35039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 27570 - 27522
Alignment:
Q  213 tatgaaaacagtttgactttattttatcttttattgtagaaatagctta 261  Q
    |||||||||| ||||||||||||||||||| | || |||||||| ||||    
T  27570 tatgaaaacaatttgactttattttatcttctgttatagaaataactta 27522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University