View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5831_low_11 (Length: 427)

Name: NF5831_low_11
Description: NF5831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5831_low_11
NF5831_low_11
[»] chr6 (69 HSPs)
chr6 (15-409)||(27593151-27593545)
chr6 (146-409)||(27677745-27678008)
chr6 (187-409)||(27678780-27679002)
chr6 (20-191)||(27706785-27706956)
chr6 (187-409)||(27706533-27706755)
chr6 (36-191)||(27678595-27678750)
chr6 (187-409)||(31284122-31284344)
chr6 (185-409)||(27338196-27338420)
chr6 (185-409)||(27398936-27399160)
chr6 (185-409)||(27698625-27698849)
chr6 (189-409)||(28780975-28781195)
chr6 (185-409)||(28786110-28786334)
chr6 (185-409)||(28792231-28792455)
chr6 (189-409)||(26622812-26623032)
chr6 (189-409)||(26728790-26729010)
chr6 (189-409)||(27724976-27725196)
chr6 (187-399)||(27229066-27229278)
chr6 (185-409)||(27718510-27718734)
chr6 (189-408)||(26802278-26802497)
chr6 (189-409)||(27611133-27611353)
chr6 (185-408)||(26861448-26861671)
chr6 (213-408)||(26884023-26884218)
chr6 (185-402)||(26655821-26656038)
chr6 (185-402)||(26761792-26762009)
chr6 (185-399)||(27604846-27605066)
chr6 (242-384)||(27531353-27531495)
chr6 (251-409)||(25579617-25579775)
chr6 (185-409)||(26646305-26646535)
chr6 (185-409)||(26752273-26752503)
chr6 (251-409)||(25481640-25481798)
chr6 (251-402)||(26055824-26055975)
chr6 (251-402)||(26075794-26075945)
chr6 (251-409)||(26142763-26142921)
chr6 (251-409)||(28234462-28234620)
chr6 (251-408)||(25538438-25538595)
chr6 (185-345)||(26823678-26823832)
chr6 (251-409)||(26048743-26048901)
chr6 (251-409)||(26069912-26070070)
chr6 (283-405)||(26635620-26635742)
chr6 (283-405)||(26741586-26741708)
chr6 (257-402)||(26974956-26975101)
chr6 (284-409)||(29825958-29826083)
chr6 (184-391)||(26949489-26949699)
chr6 (272-327)||(27427816-27427871)
chr6 (272-390)||(26959084-26959202)
chr6 (251-409)||(28242702-28242860)
chr6 (121-189)||(27725237-27725310)
chr6 (284-348)||(27665309-27665373)
chr6 (251-409)||(28325379-28325537)
chr6 (184-313)||(28139372-28139501)
chr6 (69-112)||(27678008-27678051)
chr6 (270-409)||(28181031-28181170)
chr6 (263-409)||(28185276-28185422)
chr6 (285-402)||(26848592-26848709)
chr6 (272-348)||(25071578-25071654)
chr6 (272-348)||(27214336-27214412)
chr6 (272-348)||(27234816-27234892)
chr6 (282-346)||(29617589-29617653)
chr6 (287-378)||(26617260-26617351)
chr6 (132-189)||(26655721-26655784)
chr6 (287-378)||(26723188-26723279)
chr6 (132-189)||(26761692-26761755)
chr6 (331-402)||(26937072-26937143)
chr6 (330-407)||(26893604-26893681)
chr6 (132-161)||(27698918-27698947)
chr6 (132-161)||(27718805-27718834)
chr6 (368-405)||(28149953-28149989)
chr6 (361-402)||(28481232-28481273)
chr6 (361-402)||(29793656-29793697)
[»] scaffold1254 (2 HSPs)
scaffold1254 (185-409)||(48-272)
scaffold1254 (18-96)||(411-489)
[»] scaffold0419 (2 HSPs)
scaffold0419 (185-409)||(7357-7581)
scaffold0419 (18-96)||(7140-7218)
[»] scaffold0349 (6 HSPs)
scaffold0349 (185-409)||(14486-14710)
scaffold0349 (189-409)||(3553-3773)
scaffold0349 (121-189)||(3814-3887)
scaffold0349 (185-280)||(8061-8156)
scaffold0349 (132-161)||(8227-8256)
scaffold0349 (132-161)||(14779-14808)
[»] scaffold0277 (3 HSPs)
scaffold0277 (189-409)||(13763-13983)
scaffold0277 (185-409)||(4802-5026)
scaffold0277 (121-175)||(5083-5142)
[»] chr4 (8 HSPs)
chr4 (185-409)||(18724203-18724427)
chr4 (185-409)||(18699518-18699742)
chr4 (189-409)||(18731622-18731842)
chr4 (184-409)||(18679685-18679910)
chr4 (189-409)||(18655595-18655815)
chr4 (272-327)||(17989250-17989305)
chr4 (272-327)||(18073684-18073739)
chr4 (272-407)||(5091087-5091222)
[»] chr1 (3 HSPs)
chr1 (186-409)||(268475-268698)
chr1 (185-408)||(28127798-28128016)
chr1 (185-400)||(28164489-28164704)
[»] chr8 (2 HSPs)
chr8 (187-408)||(29273902-29274123)
chr8 (272-409)||(31903770-31903907)
[»] scaffold0038 (3 HSPs)
scaffold0038 (251-409)||(34623-34781)
scaffold0038 (251-409)||(42864-43022)
scaffold0038 (251-409)||(116694-116852)
[»] scaffold0019 (1 HSPs)
scaffold0019 (270-409)||(58413-58552)
[»] scaffold0003 (1 HSPs)
scaffold0003 (272-327)||(59492-59547)
[»] chr2 (1 HSPs)
chr2 (275-402)||(17993822-17993949)
[»] chr5 (1 HSPs)
chr5 (334-402)||(16688992-16689060)


Alignment Details
Target: chr6 (Bit Score: 391; Significance: 0; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 15 - 409
Target Start/End: Complemental strand, 27593545 - 27593151
Alignment:
Q  15 agatgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagttccacataccatttctgt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27593545 agatgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagtttcacataccatttctgt 27593446  T
Q  115 cataacttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593445 cataacttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctct 27593346  T
Q  215 tccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctctta 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593345 tccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctctta 27593246  T
Q  315 ctgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593245 ctgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 27593151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 146 - 409
Target Start/End: Complemental strand, 27678008 - 27677745
Alignment:
Q  146 tatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaatacc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27678008 tatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaatacc 27677909  T
Q  246 aagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatga 345  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||  |    
T  27677908 aagtattcctcaatttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaa 27677809  T
Q  346 caatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  27677808 tcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctagg 27677745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 187 - 409
Target Start/End: Original strand, 27678780 - 27679002
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678780 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 27678879  T
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 386  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  27678880 ttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttc 27678979  T
Q  387 tcaaggccattgaagagtctagg 409  Q
    |||||||||||||||||||||||    
T  27678980 tcaaggccattgaagagtctagg 27679002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 27706956 - 27706785
Alignment:
Q  20 aacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagttccacataccatttctgtcataa 119  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  27706956 aacagtaacaacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagtttcacataccatttctgtcataa 27706857  T
Q  120 cttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27706856 cttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 27706785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 187 - 409
Target Start/End: Complemental strand, 27706755 - 27706533
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27706755 tctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggt 27706656  T
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 386  Q
    ||||| |||||||||||||||||| ||  ||||||||||||| |||||||||||||  |  |||  ||||||||| |  |||||||||||||||||||||    
T  27706655 ttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttc 27706556  T
Q  387 tcaaggccattgaagagtctagg 409  Q
    |||||||||||||||||||||||    
T  27706555 tcaaggccattgaagagtctagg 27706533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 27678595 - 27678750
Alignment:
Q  36 aagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagttccacataccatttctgtcataacttttctcataagtta 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27678595 aagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagtttcacataccatttctgtcataacttttctcataagtta 27678694  T
Q  136 taaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678695 taaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 27678750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 187 - 409
Target Start/End: Original strand, 31284122 - 31284344
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||  | |||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  31284122 tctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggt 31284221  T
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 386  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||  |||||||||||  |||||||||||||||||||      
T  31284222 ttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcg 31284321  T
Q  387 tcaaggccattgaagagtctagg 409  Q
     ||| ||||||||||||||||||    
T  31284322 acaatgccattgaagagtctagg 31284344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 27338420 - 27338196
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||  | ||||||||| || ||||||||||| || |  | ||||||||  ||||    
T  27338420 attctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacg 27338321  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||| |||||||| |||||| ||||||||||||    
T  27338320 gttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcact 27338221  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
    | |||||||||||||||||||||||    
T  27338220 tgtcaaggccattgaagagtctagg 27338196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 27399160 - 27398936
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||  | ||||||||| || ||||||||||| || |  | ||||||||  ||||    
T  27399160 attctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacg 27399061  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||| |||||||| |||||| ||||||||||||    
T  27399060 gttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcact 27398961  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
    | |||||||||||||||||||||||    
T  27398960 tgtcaaggccattgaagagtctagg 27398936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 27698849 - 27698625
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||  | ||  |||||||| ||| ||||||| || || | |||||||||| |||    
T  27698849 attctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacg 27698750  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27698749 gttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27698650  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     |||||||||||||| || ||||||    
T  27698649 cctcaaggccattgatgaatctagg 27698625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 189 - 409
Target Start/End: Original strand, 28780975 - 28781195
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||| ||||||||||||| ||||| |||||| ||  | ||  |||||||| ||||||||||| || || | |||||||||  |||||||    
T  28780975 tcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 28781074  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||    
T  28781075 taccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 28781174  T
Q  389 aaggccattgaagagtctagg 409  Q
    |||||||| ||||| ||||||    
T  28781175 aaggccatcgaagaatctagg 28781195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 185 - 409
Target Start/End: Original strand, 28786110 - 28786334
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| |||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  28786110 attcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacg 28786209  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28786210 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28786309  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     ||||||||||| ||||| ||||||    
T  28786310 cctcaaggccatcgaagaatctagg 28786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 185 - 409
Target Start/End: Original strand, 28792231 - 28792455
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| |||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  28792231 attcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacg 28792330  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28792331 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28792430  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     ||||||||||| ||||| ||||||    
T  28792431 cctcaaggccatcgaagaatctagg 28792455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 189 - 409
Target Start/End: Original strand, 26622812 - 26623032
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| | | |||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26622812 tcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggttt 26622911  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
    ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||   ||  |||||||||||  | ||||||| ||||||||||  |    
T  26622912 cactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgac 26623011  T
Q  389 aaggccattgaagagtctagg 409  Q
    || || || ||||||||||||    
T  26623012 aatgctatcgaagagtctagg 26623032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 189 - 409
Target Start/End: Original strand, 26728790 - 26729010
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| | | |||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26728790 tcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggttt 26728889  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
    ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||   ||  |||||||||||  | ||||||| ||||||||||  |    
T  26728890 cactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgac 26728989  T
Q  389 aaggccattgaagagtctagg 409  Q
    || || || ||||||||||||    
T  26728990 aatgctatcgaagagtctagg 26729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 189 - 409
Target Start/End: Complemental strand, 27725196 - 27724976
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    |||||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||| ||||| || || | |||||||||| |||||||    
T  27725196 tcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttt 27725097  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||    
T  27725096 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 27724997  T
Q  389 aaggccattgaagagtctagg 409  Q
    ||||||||||| || ||||||    
T  27724996 aaggccattgatgaatctagg 27724976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 187 - 399
Target Start/End: Original strand, 27229066 - 27229278
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| ||  | ||  |||||||| ||||| ||||| || || | |||||||||| |||||    
T  27229066 tctcatggctatacaatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggt 27229165  T
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 386  Q
    || ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| | |||||||||||||||||      
T  27229166 tttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcg 27229265  T
Q  387 tcaaggccattga 399  Q
    |||||||||||||    
T  27229266 tcaaggccattga 27229278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 27718734 - 27718510
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||| ||||| | ||| |||  | ||  |||||||| ||||||||||| || || | |||||||||| ||     
T  27718734 attctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcaca 27718635  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27718634 gttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27718535  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     |||||||||||||| || ||||||    
T  27718534 cctcaaggccattgatgaatctagg 27718510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 189 - 408
Target Start/End: Original strand, 26802278 - 26802497
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || || | ||||||||||||||||||    
T  26802278 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 26802377  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
     || |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||    
T  26802378 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 26802477  T
Q  389 aaggccattgaagagtctag 408  Q
    |||||||||||||| |||||    
T  26802478 aaggccattgaagaatctag 26802497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 189 - 409
Target Start/End: Complemental strand, 27611353 - 27611133
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||| | ||||||||||  ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||||||    
T  27611353 tcatggctatgcaattagcttcctcttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 27611254  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||    
T  27611253 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctc 27611154  T
Q  389 aaggccattgaagagtctagg 409  Q
    ||||||||||| || ||||||    
T  27611153 aaggccattgatgaatctagg 27611133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 185 - 408
Target Start/End: Original strand, 26861448 - 26861671
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| ||||||||||||||||||| ||||||| |||| ||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||||| |    
T  26861448 attctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatg 26861547  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||  |||||||||| |||||   ||  |||||||||||  ||||||||| |  ||||||    
T  26861548 gttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcact 26861647  T
Q  385 tctcaaggccattgaagagtctag 408  Q
       ||| |||||||||||||||||    
T  26861648 cgacaatgccattgaagagtctag 26861671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 213 - 408
Target Start/End: Original strand, 26884023 - 26884218
Alignment:
Q  213 cttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctct 312  Q
    ||||| ||||| |||||||||  | ||  |||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  313 tactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctag 408  Q
    |||| ||||||||||| |||||||||||||||| |||  ||||| ||||||||  |||||||||||||||||  |||||||||||||||| |||||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctag 26884218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 185 - 402
Target Start/End: Original strand, 26655821 - 26656038
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||||||  |  ||||||||||| ||||||||||| || || | |||||| ||| |||    
T  26655821 attctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacg 26655920  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||| | || |||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  26655921 gttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcact 26656020  T
Q  385 tctcaaggccattgaaga 402  Q
      | ||||||||||||||    
T  26656021 cgttaaggccattgaaga 26656038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 185 - 402
Target Start/End: Original strand, 26761792 - 26762009
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||||||  |  ||||||||||| ||||||||||| || || | |||||| ||| |||    
T  26761792 attctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacg 26761891  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||| | || |||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  26761892 gttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcact 26761991  T
Q  385 tctcaaggccattgaaga 402  Q
      | ||||||||||||||    
T  26761992 cgttaaggccattgaaga 26762009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 185 - 399
Target Start/End: Complemental strand, 27605066 - 27604846
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccac------ttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactc 278  Q
    ||||||||||||||||||| ||||||||| ||| |      |||| |||||||||  | ||  |||||||| ||||| ||||| || || | ||||||||    
T  27605066 attctcatggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactc 27604967  T
Q  279 ggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacacc 378  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||||||| |||| ||||| ||||||| |||||||||||||    
T  27604966 gatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacacc 27604867  T
Q  379 atcacttctcaaggccattga 399  Q
    | |||||||||||||||||||    
T  27604866 agcacttctcaaggccattga 27604846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 242 - 384
Target Start/End: Complemental strand, 27531495 - 27531353
Alignment:
Q  242 taccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattg 341  Q
    |||||||| ||||||||||| || ||    ||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  27531495 taccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattg 27531396  T
Q  342 atgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  27531395 atgacaatgatcttcaaagaggagatgaaatcacaccatcact 27531353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 25579617 - 25579775
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||||||||||||||| |||||||||||  ||  ||| ||||| |||||||| |||||||||  ||||||||||||    |||||| ||||||| ||||    
T  25579617 ttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatg 25579716  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
     ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  25579717 atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctagg 25579775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 185 - 409
Target Start/End: Original strand, 26646305 - 26646535
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttc------aatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactc 278  Q
    |||||||||||||||||||| ||||||| |||| ||||      ||||||||| |  | ||  ||||| || |||||||  ||||| || ||||||||||    
T  26646305 attctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactc 26646404  T
Q  279 ggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacacc 378  Q
    |  ||||||| || ||  |||||||||||||||||||||||||||||||  ||||||||||||||||   || |||| | |||||| |||||||||||||    
T  26646405 gtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacacc 26646504  T
Q  379 atcacttctcaaggccattgaagagtctagg 409  Q
    ||||||  |||||||||||||||| ||||||    
T  26646505 atcactcatcaaggccattgaagaatctagg 26646535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 185 - 409
Target Start/End: Original strand, 26752273 - 26752503
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttc------aatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactc 278  Q
    |||||||||||||||||||| ||||||| |||| ||||      ||||||||| |  | ||  ||||| || |||||||  ||||| || ||||||||||    
T  26752273 attctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactc 26752372  T
Q  279 ggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacacc 378  Q
    |  ||||||| || ||  |||||||||||||||||||||||||||||||  ||||||||||||||||   || |||| | |||||| |||||||||||||    
T  26752373 gtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacacc 26752472  T
Q  379 atcacttctcaaggccattgaagagtctagg 409  Q
    ||||||  |||||||||||||||| ||||||    
T  26752473 atcactcatcaaggccattgaagaatctagg 26752503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 25481640 - 25481798
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||||| |||||| || |||||||||||  ||  ||| ||||| |||||||| |||||||||  ||||||||||||    || ||||||||||| ||||    
T  25481640 ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatg 25481739  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
     ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  25481740 atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctagg 25481798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 402
Target Start/End: Original strand, 26055824 - 26055975
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||||| |||||| || |||||||||||  ||  ||| ||||| |||||||| |||||||||  |||||||||||| || || ||||||||||| ||||    
T  26055824 ttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg 26055923  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
     ||||||||||||| ||||||||||| |||||||| |||||||||| |||||    
T  26055924 atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaaga 26055975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 402
Target Start/End: Original strand, 26075794 - 26075945
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||||| |||||| || |||||||||||  ||  ||| ||||| |||||||| |||||||||  |||||||||||| || || ||||||||||| ||||    
T  26075794 ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg 26075893  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
     ||||||||||||| ||||||||||| |||||||| |||||||||| |||||    
T  26075894 atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaaga 26075945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 26142763 - 26142921
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    |||||||||||||| || |||||||||||  ||   || ||||| |||||||| |||||||||  ||||||||||||    || ||||||||||| ||||    
T  26142763 ttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgataatg 26142862  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
     |||| |||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  26142863 atcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctagg 26142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 28234462 - 28234620
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| ||||  |||||||| |  ||||||  | ||||||||||| ||||||||||||||||||  |    
T  28234462 ttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacaggg 28234561  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  28234562 agcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctagg 28234620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 408
Target Start/End: Original strand, 25538438 - 25538595
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    |||||||||||||| || |||||||||||  ||   || ||||| |||||||| |||||||||  |||||||||||| |  || ||||| ||||| ||||    
T  25538438 ttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgataatg 25538537  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctag 408  Q
     |||| |||||||| |||||||||||||||||||| |||||||||| ||||| |||||    
T  25538538 atcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctag 25538595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 345
Target Start/End: Original strand, 26823678 - 26823832
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||||||||||||||| ||| ||||||||||      | |||| ||||||| |||||||||||| || |||||||| |||||   |||||||||||| |    
T  26823678 attctcatggctatgcagtcaacttcctcttc------agtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatg 26823771  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatga 345  Q
      || |||||||||||||||||||||||||| |||||||||||| |||||||  |||||||    
T  26823772 aatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttttgatga 26823832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 26048743 - 26048901
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    |||||||||||||| || |||||||||||  ||  ||| ||||| |||||||| |||||||| | ||||||||||||    || ||||||||||| ||||    
T  26048743 ttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatg 26048842  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
     |||| |||||||| |||||||||||||   |||| |||||||||| ||||| ||||||    
T  26048843 atcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctagg 26048901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 26069912 - 26070070
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    |||||||||||||| || |||||||||||  ||  ||| ||||| |||||||| |||||||| | ||||||||||||    || ||||||||||| ||||    
T  26069912 ttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatg 26070011  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
     |||| |||||||| |||||||||||||   |||| |||||||||| ||||| ||||||    
T  26070012 atcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctagg 26070070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 26635620 - 26635742
Alignment:
Q  283 cggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatca 382  Q
    |||||||||||| || ||||| || |||||| ||||||| |||||||||||||||||||||||||| |  ||| ||| |||  ||||||||||||| ||     
T  26635620 cggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcg 26635719  T
Q  383 cttctcaaggccattgaagagtc 405  Q
    || ||||||  ||||||||||||    
T  26635720 ctcctcaagagcattgaagagtc 26635742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 26741586 - 26741708
Alignment:
Q  283 cggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatca 382  Q
    |||||||||||| || ||||| || |||||| ||||||| |||||||||||||||||||||||||| |  ||| ||| |||  ||||||||||||| ||     
T  26741586 cggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcg 26741685  T
Q  383 cttctcaaggccattgaagagtc 405  Q
    || ||||||  ||||||||||||    
T  26741686 ctcctcaagagcattgaagagtc 26741708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 402
Target Start/End: Original strand, 26974956 - 26975101
Alignment:
Q  257 agtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttc 356  Q
    ||||||||||| |  |||||||| | |||||||||||| || ||||| || |||||| ||||||| |||||||||| ||||||||||||||| |  |||     
T  26974956 agtttcagaggtaccgacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagctta 26975055  T
Q  357 aaagaggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    ||| |||  | ||||||||||| || || ||||||  |||||||||    
T  26975056 aaaaaggggacgaaatcacaccttcgctcctcaagagcattgaaga 26975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 29825958 - 29826083
Alignment:
Q  284 ggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 383  Q
    ||||| ||||||||||||||||| ||||| |||||||||  |||   |||||||||||||||||| |  |||||||||||  | ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  384 ttctcaaggccattgaagagtctagg 409  Q
    || | ||||| ||| |||| ||||||    
T  29826058 ttgtgaaggcaattcaagaatctagg 29826083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 391
Target Start/End: Original strand, 26949489 - 26949699
Alignment:
Q  184 tattctcatggctatgcaatcac---cttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcgg 280  Q
    |||||||||||||||||||||||   ||||||| || |||||  |||| ||||||| ||| |   | || ||| | ||||||||||| |  ||||||||     
T  26949489 tattctcatggctatgcaatcactttcttcctcctctacttccttttcttatgatttcaactttgatgtgttcattagtttcagaggtaccgacactcga 26949588  T
Q  281 tacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccat 380  Q
    | |||||||||||| |||||||| || |||||  ||||||||||||||   |||||||||||||| || |  ||||| | |||  | ||||||||||| |    
T  26949589 ttcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacacctt 26949688  T
Q  381 cacttctcaag 391  Q
    |||| ||||||    
T  26949689 cactcctcaag 26949699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 27427871 - 27427816
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaat 327  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  27427871 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 27427816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 26959084 - 26959202
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaa 371  Q
    |||||||| | | |||||||||| || ||||| || |||||| ||||||| |||||| ||||||||||||||||||| |  ||| ||| |||  ||||||    
T  26959084 gacactcgattcagtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaa 26959183  T
Q  372 tcacaccatcacttctcaa 390  Q
    ||||||| || ||||||||    
T  26959184 tcacaccttcgcttctcaa 26959202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 28242702 - 28242860
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| || || ||||||||||| | ||||  | | ||||||||   |||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||| | ||||  |  |||| |||||||||||| |||||||||||||||||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctagg 28242860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 27725310 - 27725237
Alignment:
Q  121 ttttctcataagttataaagttacttatcaaagacttc-----acagaccacaaaaacttctcattcatattct 189  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||  ||||||||||||    
T  27725310 ttttctcataagttataaagttacttatcaaagacttcacataacagaccacaaaaatttaccattcatattct 27725237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 27665373 - 27665309
Alignment:
Q  284 ggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaa 348  Q
    ||||||||||| || ||||| ||||||||| ||||||| |||||| |||||||||||||||||||    
T  27665373 ggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgacaa 27665309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 28325379 - 28325537
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| || || ||||||||||| | ||||  |   ||| ||||    ||||||||||||||||| |    
T  28325379 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaag 28325478  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||||| ||||  | ||||| ||||| |||||| |||||||||||||||||||||||    
T  28325479 accttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctagg 28325537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 28139372 - 28139501
Alignment:
Q  184 tattctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 283  Q
    |||| |||||||| ||||| ||||||| ||||| |||||  | |||||||  | || |||| | || || ||||| |||||||| ||||||||||| | |    
T  28139372 tattttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttc 28139471  T
Q  284 ggtttcaccggcaatctctacaaggctctt 313  Q
    |||||||| || ||||||||||| ||||||    
T  28139472 ggtttcactggaaatctctacaaagctctt 28139501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 27678051 - 27678008
Alignment:
Q  69 atgattggtccacacgactataggaagttccacataccatttct 112  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  27678051 atgattggtccacacggctataggaagtttcacataccatttct 27678008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 409
Target Start/End: Original strand, 28181031 - 28181170
Alignment:
Q  270 gtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatga 369  Q
    |||||||||| || ||||| || || |||||| | |  ||||||  |||||||||||||   |||||||| |||||||  |  |||||| ||||  | ||    
T  28181031 gtgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaaga 28181130  T
Q  370 aatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
    ||| ||| |||||||| |||||||||||||||||||||||    
T  28181131 aataacatcatcacttttcaaggccattgaagagtctagg 28181170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 409
Target Start/End: Original strand, 28185276 - 28185422
Alignment:
Q  263 agaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagag 362  Q
    ||||| ||||||||||| ||  |||| || || |||||| | |  ||||||  |||||||||||||   |||||||| |||||||  |  |||||| |||    
T  28185276 agaggtagtgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggag 28185375  T
Q  363 gaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
    |  | ||||| ||| |||||||| |||||||||||||||||||||||    
T  28185376 gtgaagaaataacatcatcacttttcaaggccattgaagagtctagg 28185422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 402
Target Start/End: Original strand, 26848592 - 26848709
Alignment:
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    ||||||| || |||||||| || |||||| ||||||| ||||||   ||||||||||||||||| | |||||| || ||  |||| |||||||| || ||    
T  26848592 gtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgct 26848691  T
Q  385 tctcaaggccattgaaga 402  Q
     ||||||  |||||||||    
T  26848692 cctcaagaacattgaaga 26848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 25071578 - 25071654
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaa 348  Q
    |||||||| | |||||| ||||| ||||| || || |||||| ||||||| |||||| ||||||| |||||||||||    
T  25071578 gacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaa 25071654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 27214336 - 27214412
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaa 348  Q
    ||||||||  ||||||||||||| |||||||| || ||||||  |||||| ||||||   |||||||||||||||||    
T  27214336 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaa 27214412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 27234892 - 27234816
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaa 348  Q
    ||||||||  ||||||||||||| |||||||| || ||||||  |||||| ||||||   |||||||||||||||||    
T  27234892 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaa 27234816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 346
Target Start/End: Original strand, 29617589 - 29617653
Alignment:
Q  282 acggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgac 346  Q
    ||||||||| | ||||||||||||| || || | ||| || ||||||||||||||||||||||||    
T  29617589 acggtttcatccgcaatctctacaaagcactgaatgaaaaaggaatcaacaccttcattgatgac 29617653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 26617260 - 26617351
Alignment:
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacacc 378  Q
    ||||||||||||||||| || ||||||  |||||| ||| ||   ||||||||||||||||| |  ||||| |||||  |||||||||||||    
T  26617260 ttcaccggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26655721 - 26655784
Alignment:
Q  132 gttataaagttacttatcaaagact-----tcacagaccacaaaaactt-ctcattcatattct 189  Q
    |||||||||||||||| ||||||||     ||||||||||||||||||| ||||||||||||||    
T  26655721 gttataaagttacttaccaaagactttacatcacagaccacaaaaacttactcattcatattct 26655784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 26723188 - 26723279
Alignment:
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacacc 378  Q
    ||||||||||||||||| || ||||||  |||||| ||| ||   ||||||||||||||||| |  ||||| |||||  |||||||||||||    
T  26723188 ttcaccggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26761692 - 26761755
Alignment:
Q  132 gttataaagttacttatcaaagact-----tcacagaccacaaaaactt-ctcattcatattct 189  Q
    |||||||||||||||| ||||||||     ||||||||||||||||||| ||||||||||||||    
T  26761692 gttataaagttacttaccaaagactttacatcacagaccacaaaaacttactcattcatattct 26761755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 26937072 - 26937143
Alignment:
Q  331 caccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    |||||||||||||||||| |  || ||  ||||| | |||||||||||||||||| ||||||| ||||||||    
T  26937072 caccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaaga 26937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 26893681 - 26893604
Alignment:
Q  330 acaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtcta 407  Q
    |||||||||||||||| |  |  ||||| |||||  | |||||| ||||||||||| ||||||| |||||||||||||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtcta 26893604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 27698947 - 27698918
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  27698947 gttataaagttacttatcaaagacttcaca 27698918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 27718834 - 27718805
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  27718834 gttataaagttacttatcaaagacttcaca 27718805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 405
Target Start/End: Original strand, 28149953 - 28149989
Alignment:
Q  368 gaaatcacaccatcacttctcaaggccattgaagagtc 405  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28149953 gaaatcacaccatcact-ctcaaggccattgaagagtc 28149989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 28481273 - 28481232
Alignment:
Q  361 aggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  28481273 aggagatgaaatcacaccatcacttctcaaagcaattgaaga 28481232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 29793697 - 29793656
Alignment:
Q  361 aggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  29793697 aggagatgaaatcacaccatcacttctcaaagcaattgaaga 29793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 272 - 48
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| ||||  | ||  |||||||| ||||| ||||| || || | |||||||||  |||    
T  272 attctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacg 173  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  172 gttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 73  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     ||||||||||| ||||| ||||||    
T  72 cctcaaggccatcgaagaatctagg 48  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 489 - 411
Alignment:
Q  18 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  489 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagt 411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 409
Target Start/End: Original strand, 7357 - 7581
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| ||||  | ||  |||||||| ||||| ||||| || || | |||||||||  |||    
T  7357 attctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacg 7456  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  7457 gttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 7556  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     ||||||||||| ||||| ||||||    
T  7557 cctcaaggccatcgaagaatctagg 7581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 7140 - 7218
Alignment:
Q  18 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7140 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagt 7218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 129; Significance: 1e-66; HSPs: 6)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 14710 - 14486
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||  | ||  |||||||| ||| ||||||| || || | |||||||||| |||    
T  14710 attctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacg 14611  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  14610 gttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 14511  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     |||||||||||||| || ||||||    
T  14510 cctcaaggccattgatgaatctagg 14486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 189 - 409
Target Start/End: Complemental strand, 3773 - 3553
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    |||||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||| ||||| || || | |||||||||| |||||||    
T  3773 tcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttt 3674  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||    
T  3673 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 3574  T
Q  389 aaggccattgaagagtctagg 409  Q
    ||||||||||| || ||||||    
T  3573 aaggccattgatgaatctagg 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 3887 - 3814
Alignment:
Q  121 ttttctcataagttataaagttacttatcaaagacttc-----acagaccacaaaaacttctcattcatattct 189  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||  ||||||||||||    
T  3887 ttttctcataagttataaagttacttatcaaagacttcacataacagaccacaaaaatttaccattcatattct 3814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 8156 - 8061
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcgg 280  Q
    |||||||||||||| |||||||||||||| ||| ||||| | ||| |||  | ||  |||||||| ||||||||||| || || | ||||||||||    
T  8156 attctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 8256 - 8227
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  8256 gttataaagttacttatcaaagacttcaca 8227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 14808 - 14779
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  14808 gttataaagttacttatcaaagacttcaca 14779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 189 - 409
Target Start/End: Complemental strand, 13983 - 13763
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||| ||||||||||||| ||||| |||||| ||  | ||  |||||||| ||||||||||| || || | |||||||||  |||||||    
T  13983 tcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 13884  T
Q  289 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 388  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||    
T  13883 taccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 13784  T
Q  389 aaggccattgaagagtctagg 409  Q
    |||||||| ||||| ||||||    
T  13783 aaggccatcgaagaatctagg 13763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 5026 - 4802
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| |||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  5026 attcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacg 4927  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||    
T  4926 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccct 4827  T
Q  385 tctcaaggccattgaagagtctagg 409  Q
     | |||||||||||| || ||||||    
T  4826 ccgcaaggccattgatgaatctagg 4802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 5142 - 5083
Alignment:
Q  121 ttttctcataagttataaagttacttatcaaagact-----tcacagaccacaaaaactt 175  Q
    |||||||||||||||||||||||| |||||| ||||     |||||||||||||||||||    
T  5142 ttttctcataagttataaagttacctatcaaggactttacatcacagaccacaaaaactt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 18724427 - 18724203
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 283  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||    
T  18724427 attctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaac 18724329  T
Q  284 ggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 383  Q
    ||||| || ||  |||||||||||||||||||||||||||||||| |||||||||||||||||  ||  || ||||||||  ||||||||| ||||||||    
T  18724328 ggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcac 18724229  T
Q  384 ttctcaaggccattgaagagtctagg 409  Q
    |   ||| ||||||||||||||||||    
T  18724228 tcgacaatgccattgaagagtctagg 18724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 185 - 409
Target Start/End: Complemental strand, 18699742 - 18699518
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 283  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || | |||||||||  ||    
T  18699742 attctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcactgacactcgtgac 18699644  T
Q  284 ggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcac 383  Q
    ||||| || ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||  ||  || ||||| ||  ||||||||| ||||||||    
T  18699643 ggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcac 18699544  T
Q  384 ttctcaaggccattgaagagtctagg 409  Q
    |   ||| ||||||||||||||||||    
T  18699543 tcgacaatgccattgaagagtctagg 18699518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 189 - 409
Target Start/End: Complemental strand, 18731842 - 18731622
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtt 287  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||||||    
T  18731842 tcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggtt 18731744  T
Q  288 tcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttct 387  Q
    | || ||| |||||||||  ||||||||||||||||||||| |||||||||||||||||  ||  || ||||||||  ||||||||| |||||||||       
T  18731743 ttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcga 18731644  T
Q  388 caaggccattgaagagtctagg 409  Q
    ||| ||||||||||||||||||    
T  18731643 caatgccattgaagagtctagg 18731622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 409
Target Start/End: Complemental strand, 18679910 - 18679685
Alignment:
Q  184 tattctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggta 282  Q
    |||| ||||||||||||||||||||||||| | | ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  |    
T  18679910 tattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaa 18679812  T
Q  283 cggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatca 382  Q
    |||||| || ||  ||||||||||||||||||||||||| |||||| |||||||||||||||||  ||  || ||||||||  ||||||||| |||||||    
T  18679811 cggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatca 18679712  T
Q  383 cttctcaaggccattgaagagtctagg 409  Q
    ||   ||| ||||||||||||||||||    
T  18679711 ctcgacaatgccattgaagagtctagg 18679685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 189 - 409
Target Start/End: Complemental strand, 18655815 - 18655595
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtt 287  Q
    ||||||||| ||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||||||    
T  18655815 tcatggctaggcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggtt 18655717  T
Q  288 tcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttct 387  Q
    | || ||  |||||||||| ||||||||||||||||||||| |||||||||||||||||  ||  || ||||| ||  ||||||||| |||||||||       
T  18655716 ttactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcga 18655617  T
Q  388 caaggccattgaagagtctagg 409  Q
    ||| |||||| |||||||||||    
T  18655616 caatgccattcaagagtctagg 18655595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 17989305 - 17989250
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaat 327  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  17989305 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 17989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 18073684 - 18073739
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaat 327  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  18073684 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 18073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 407
Target Start/End: Complemental strand, 5091222 - 5091087
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaa 371  Q
    |||||||| |||||||| || || ||||||||  | |||||   || |||||||||  ||||||||||||||||||  |  |||||  ||||| |  |||    
T  5091222 gacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttcagcgaggagaccaaa 5091123  T
Q  372 tcacaccatcacttctcaaggccattgaagagtcta 407  Q
    | ||||| |||||||||||||||||| |||| ||||    
T  5091122 taacaccgtcacttctcaaggccattcaagaatcta 5091087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 409
Target Start/End: Complemental strand, 268698 - 268475
Alignment:
Q  186 ttctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacgg 285  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||  |     ||||| || |||||||  ||||||||  ||||||||||  | ||    
T  268698 ttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgaggg 268599  T
Q  286 tttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcactt 385  Q
    ||| |  ||| |||||||||||||||||||||||||||||||| ||||||||||||||||   ||  |||||||||||  ||||||||| |||||||||     
T  268598 ttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactc 268499  T
Q  386 ctcaaggccattgaagagtctagg 409  Q
      ||| ||||||||||||||||||    
T  268498 gacaatgccattgaagagtctagg 268475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 408
Target Start/End: Complemental strand, 28128016 - 28127798
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||| |||||||||      |||||||||||  | || ||||||||| |||||||| ||||| || |||||||||||  |||    
T  28128016 attctcatggctatgcaatcacattcctcttc------aatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacg 28127923  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagagga-aatgaaatcacaccatcac 383  Q
    ||||||| ||| ||||||||||||| |||  ||||||||||||| |||| |||||||||||   |  |||| | |||||| ||  |||||||||| ||||    
T  28127922 gtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcac 28127823  T
Q  384 ttctcaaggccattgaagagtctag 408  Q
    || | |||||||||||||| |||||    
T  28127822 ttttaaaggccattgaagaatctag 28127798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 400
Target Start/End: Complemental strand, 28164704 - 28164489
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| | ||| | |||||||||| |||||||||||||||  | || ||||||||| ||||||||||| || || |||||||||||  |||    
T  28164704 attctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacg 28164605  T
Q  285 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 384  Q
    ||||||| ||| ||||||| ||||| |||   |||||||||||  |||| |||||||||||   || |||| | |||||| | ||||||||||| ||| |    
T  28164604 gtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcatt 28164505  T
Q  385 tctcaaggccattgaa 400  Q
      ||||||||||||||    
T  28164504 catcaaggccattgaa 28164489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 187 - 408
Target Start/End: Complemental strand, 29274123 - 29273902
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||  | ||  ||||| || |||||||  || |||||  ||||||||||  |||||    
T  29274123 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 29274024  T
Q  287 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 386  Q
    || |  ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||   ||  |||||||||||  ||||||||| | |||||||      
T  29274023 tttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcg 29273924  T
Q  387 tcaaggccattgaagagtctag 408  Q
     ||| | |||||||||||||||    
T  29273923 acaatgtcattgaagagtctag 29273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 409
Target Start/End: Original strand, 31903770 - 31903907
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaa 371  Q
    |||||||| || ||||| || || ||||||||||| ||||||  ||| ||||||||| ||||||| ||||| ||  | |  |||||||||||| ||||||    
T  31903770 gacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaa 31903869  T
Q  372 tcacaccatcacttctcaaggccattgaagagtctagg 409  Q
    |||||||||||||| |  |||| |||||||||||||||    
T  31903870 tcacaccatcacttttagaggcaattgaagagtctagg 31903907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 34623 - 34781
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| ||||  |||||||| |  ||||||  | ||||||||||| ||||||||||||||||||  |    
T  34623 ttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacaggg 34722  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  34723 agcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctagg 34781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 42864 - 43022
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| || || ||||||||||| | ||||  | | ||||||||   |||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||| | ||||  |  |||| |||||||||||| |||||||||||||||||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctagg 43022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 116694 - 116852
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| || || ||||||||||| | ||||  |   ||| ||||    ||||||||||||||||| |    
T  116694 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaag 116793  T
Q  351 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
      |||||| ||||  | ||||| ||||| |||||| |||||||||||||||||||||||    
T  116794 accttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctagg 116852  T

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Target: scaffold0019 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 409
Target Start/End: Complemental strand, 58552 - 58413
Alignment:
Q  270 gtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatga 369  Q
    |||||||||| || ||||| || || ||||||||||  ||||||  |||||||||||||   |||||||| |||||||  |  |||||| ||||  | ||    
T  58552 gtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacga 58453  T
Q  370 aatcacaccatcacttctcaaggccattgaagagtctagg 409  Q
    ||| |||||||||||| ||||||||||| |||||||||||    
T  58452 aataacaccatcacttttcaaggccattaaagagtctagg 58413  T

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Target: scaffold0003 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 59492 - 59547
Alignment:
Q  272 gacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaat 327  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  59492 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 59547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 402
Target Start/End: Complemental strand, 17993949 - 17993822
Alignment:
Q  275 actcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatca 374  Q
    ||||| || ||||||||||| |||||||| || |||||| |||||||||||||    |||||||| |||||||| |  ||||| |||||  |||||||||    
T  17993949 actcgatatggtttcaccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatca 17993850  T
Q  375 caccatcacttctcaaggccattgaaga 402  Q
    |||| || || ||||||  |||||||||    
T  17993849 caccgtcgctcctcaagagcattgaaga 17993822  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 16688992 - 16689060
Alignment:
Q  334 cttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    ||||||||||||||| |  ||||| |||||  |  ||||||||||||||||| ||||||| ||||||||    
T  16688992 cttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaaga 16689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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