View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5831_low_6 (Length: 482)

Name: NF5831_low_6
Description: NF5831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5831_low_6
NF5831_low_6
[»] chr1 (16 HSPs)
chr1 (15-473)||(226498-226985)
chr1 (15-115)||(257321-257421)
chr1 (118-188)||(257676-257746)
chr1 (424-464)||(15927675-15927715)
chr1 (424-464)||(42303838-42303878)
chr1 (424-464)||(49452501-49452541)
chr1 (424-464)||(48965957-48965997)
chr1 (424-460)||(49236438-49236474)
chr1 (417-464)||(25254161-25254208)
chr1 (425-464)||(28403392-28403431)
chr1 (417-464)||(32759514-32759561)
chr1 (417-472)||(42637596-42637651)
chr1 (417-462)||(19863513-19863558)
chr1 (424-464)||(8122568-8122608)
chr1 (417-461)||(35176709-35176753)
chr1 (424-464)||(47371010-47371050)
[»] chr3 (10 HSPs)
chr3 (417-466)||(43173511-43173560)
chr3 (417-464)||(49458985-49459032)
chr3 (419-459)||(30238035-30238075)
chr3 (417-464)||(4962144-4962191)
chr3 (417-464)||(7436992-7437039)
chr3 (417-464)||(33693888-33693935)
chr3 (424-464)||(21385929-21385969)
chr3 (417-464)||(9030540-9030587)
chr3 (417-463)||(25932026-25932072)
chr3 (428-464)||(27162935-27162971)
[»] chr7 (6 HSPs)
chr7 (424-464)||(6269046-6269086)
chr7 (417-464)||(1253964-1254011)
chr7 (417-464)||(21486756-21486803)
chr7 (417-464)||(42611137-42611184)
chr7 (336-394)||(35314136-35314194)
chr7 (424-464)||(23017603-23017643)
[»] chr8 (8 HSPs)
chr8 (417-464)||(8029288-8029335)
chr8 (424-462)||(41394485-41394523)
chr8 (424-464)||(6387342-6387382)
chr8 (417-464)||(12737518-12737565)
chr8 (424-463)||(24067420-24067459)
chr8 (417-463)||(18984951-18984997)
chr8 (427-464)||(44977350-44977387)
chr8 (424-464)||(24082809-24082849)
[»] chr5 (10 HSPs)
chr5 (417-464)||(31913988-31914035)
chr5 (419-464)||(4840942-4840987)
chr5 (417-464)||(29716337-29716384)
chr5 (419-464)||(36180117-36180162)
chr5 (424-464)||(15285962-15286002)
chr5 (417-461)||(16801197-16801241)
chr5 (424-463)||(29759234-29759273)
chr5 (417-464)||(31561428-31561475)
chr5 (336-394)||(19226276-19226334)
chr5 (334-394)||(25869396-25869456)
[»] chr4 (12 HSPs)
chr4 (417-464)||(40317114-40317161)
chr4 (417-464)||(40327188-40327235)
chr4 (419-464)||(24965927-24965972)
chr4 (424-464)||(12754926-12754966)
chr4 (417-464)||(29509496-29509543)
chr4 (417-464)||(32890496-32890543)
chr4 (417-464)||(50517713-50517760)
chr4 (424-464)||(26955870-26955910)
chr4 (333-393)||(29965836-29965896)
chr4 (417-473)||(41206853-41206909)
chr4 (424-464)||(53573782-53573822)
chr4 (330-394)||(54561839-54561903)
[»] chr2 (10 HSPs)
chr2 (417-464)||(42242418-42242465)
chr2 (424-464)||(31846608-31846648)
chr2 (417-464)||(9731563-9731610)
chr2 (424-460)||(2307995-2308031)
chr2 (417-464)||(18727052-18727099)
chr2 (417-464)||(28546300-28546347)
chr2 (417-464)||(30850976-30851023)
chr2 (331-394)||(33263485-33263548)
chr2 (417-464)||(40830251-40830298)
chr2 (424-464)||(43304717-43304757)
[»] chr6 (7 HSPs)
chr6 (417-473)||(21010367-21010423)
chr6 (417-464)||(28900266-28900313)
chr6 (333-394)||(21009964-21010025)
chr6 (417-464)||(32567762-32567809)
chr6 (336-394)||(7834997-7835055)
chr6 (415-464)||(31534539-31534588)
chr6 (424-464)||(24202723-24202763)
[»] scaffold0573 (1 HSPs)
scaffold0573 (417-464)||(9481-9528)
[»] scaffold0013 (1 HSPs)
scaffold0013 (417-469)||(89899-89951)
[»] scaffold0118 (1 HSPs)
scaffold0118 (426-462)||(38413-38449)


Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 15 - 473
Target Start/End: Complemental strand, 226985 - 226498
Alignment:
Q  15 caattttcacaagttatcatggctctcaattgtagcagcaacaacgtcttttggctatgcatttattggtattggactttctcctgctacagacatccaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  226985 caattttcacaagttatcatggctctcaattgtagcagcaacaacgtcttttggctatgcatttattggtattcgactttctcctcctacagaaatccaa 226886  T
Q  115 gagctcattgcattgggaaacactgcacttgctagcagctatgctcaaattgctatagatattcaggtatgaaaaagtgtagaaaactatatttagtgtc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  226885 gagctcattgcattgggaaacactgcacttgctagcagctatgctcaaattgctatagatattcaggtatgaagaagtgtagcaaactatatttagtgtc 226786  T
Q  215 catattagtagctttcaattttataatatagcacttacaaaataacgaaattttagtcacctattataaaaacggtttattaaaaacattcaacaatatt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  226785 catattagtagctttcaattttataatatagcacttacaaaataacgaaattttagtcacctattataaaaacggtttattaaaagcattcgacaatatt 226686  T
Q  315 aacaatataa---------------ttatcgtcaatgttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaaaatta 399  Q
    ||||||||||               ||||||||||||||||||||||| ||||||||| |||||||||||    ||||||||||| |||||||||||||     
T  226685 aacaatataattattttttatataattatcgtcaatgttttacaatttgagagtttacctcatcttgttt----tatgtaaactcgaatcgtaaaaattt 226590  T
Q  400 aaattatataaaaat------------------tttaagctgatataatattgcaaataggtcaatagtgcaaaatatgacttgagtataat 473  Q
    ||||||||||||| |                  | |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  226589 aaattatataaaatttattatatacgtgacatatataagctaatataatattgcaaataggtcaatagtgcaaaatatgacttgattataat 226498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 257321 - 257421
Alignment:
Q  15 caattttcacaagttatcatggctctcaattgtagcagcaacaacgtcttttggctatgcatttattggtattggactttctcctgctacagacatccaa 114  Q
    ||||||||||||||||||||||||||||||  |||||||| |||| |||||||| |||||||||||||||||||||||||||| |||||| | |||||||    
T  257321 caattttcacaagttatcatggctctcaatcatagcagcagcaacatcttttggttatgcatttattggtattggactttctcttgctaccgtcatccaa 257420  T
Q  115 g 115  Q
    |    
T  257421 g 257421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 257676 - 257746
Alignment:
Q  118 ctcattgcattgggaaacactgcacttgctagcagctatgctcaaattgctatagatattcaggtatgaaa 188  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  257676 ctcattgcattgggaaacactgcacttgctagcagctattctcaaattgctatagatattcaggtatgaaa 257746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 15927715 - 15927675
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  15927715 atataatattgtaaataggtcaatagtgcaaaatatgactt 15927675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 42303838 - 42303878
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  42303838 atataatattgtaaataggtcaatagtgcaaaatatgactt 42303878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 49452501 - 49452541
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  49452501 atataatattgtaaataggtcaatagtgcaaaatatgactt 49452541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 48965957 - 48965997
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  48965957 atataatattgtaaatagatcaatagtgcaaaatatgactt 48965997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 49236438 - 49236474
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatg 460  Q
    ||||||||||| |||||||||||||||||||||||||    
T  49236438 atataatattgtaaataggtcaatagtgcaaaatatg 49236474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 25254208 - 25254161
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  25254208 taagctgatataatactgtaaataagtcaatattgcaaaatatgactt 25254161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 464
Target Start/End: Original strand, 28403392 - 28403431
Alignment:
Q  425 tataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  28403392 tataatattgtaaatatgtcaatagtgcaaaatatgactt 28403431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 32759514 - 32759561
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||| | ||||||||||||||| |||||||||||||    
T  32759514 taagctaatataatatcgtaaataggtcaatagtacaaaatatgactt 32759561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 42637596 - 42637651
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgacttgagtataa 472  Q
    |||||| |||||||||| ||||||||||||||||  ||||||| |||||| |||||    
T  42637596 taagctaatataatattacaaataggtcaatagtataaaatataacttgattataa 42637651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 462
Target Start/End: Complemental strand, 19863558 - 19863513
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgac 462  Q
    |||||| ||||||||||| |||||| ||||||||| ||||||||||    
T  19863558 taagctaatataatattgtaaatagatcaatagtgtaaaatatgac 19863513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 8122608 - 8122568
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| ||| |||||||||||| ||||||||||||    
T  8122608 atataatattgtaaacaggtcaatagtgtaaaatatgactt 8122568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 35176709 - 35176753
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatga 461  Q
    |||||| ||||||||||| ||||| || |||||||||||||||||    
T  35176709 taagctaatataatattgtaaataagttaatagtgcaaaatatga 35176753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 47371010 - 47371050
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| ||||| ||||||| |||||||||||||||    
T  47371010 atataatattgtaaatatgtcaataatgcaaaatatgactt 47371050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 466
Target Start/End: Complemental strand, 43173560 - 43173511
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgacttga 466  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  43173560 taagctaatataatattgtaaataggtcaatagtgcaaaatatgacttga 43173511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 49459032 - 49458985
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  49459032 taagctaatataatattgtaaataggtcaatagtgcaaaatatgactt 49458985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 30238035 - 30238075
Alignment:
Q  419 agctgatataatattgcaaataggtcaatagtgcaaaatat 459  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  30238035 agctaatataatattgcaaataggtcaatagtgcaaaatat 30238075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 4962144 - 4962191
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  4962144 taagctaatataatattgtaaataggtcaataatgcaaaatatgactt 4962191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 7436992 - 7437039
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  7436992 taagctaatataatattgtaaataagtcaatagtgcaaaatatgactt 7437039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 33693935 - 33693888
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  33693935 taagctaatataatattgtaaatagggcaatagtgcaaaatatgactt 33693888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 21385929 - 21385969
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  21385929 atataatattgcaaataggttaatagtgaaaaatatgactt 21385969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 9030540 - 9030587
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  9030540 taagctaatataatattgcaaatatgtcaataattcaaaatatgactt 9030587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 463
Target Start/End: Complemental strand, 25932072 - 25932026
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgact 463  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||||||    
T  25932072 taagctaatataatattgtaaatatgtcaatagtgcaatatatgact 25932026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 27162971 - 27162935
Alignment:
Q  428 aatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  27162971 aatattgtaaataggtcaatagtgcaaaatataactt 27162935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 6269086 - 6269046
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6269086 atataatattgcaaataggtcaatagtgcaaaatatgactt 6269046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 1253964 - 1254011
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||    
T  1253964 taagctaatataatattgtcaataggtcaatagtgcaaaatatgactt 1254011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 21486803 - 21486756
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||| ||| |||||||||||||||||||    
T  21486803 taagctaatataatattgtaaatacgtcgatagtgcaaaatatgactt 21486756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 42611184 - 42611137
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| |||| |||||| |||||||||||||||||||||||| ||||    
T  42611184 taagctaatatgatattgtaaataggtcaatagtgcaaaatattactt 42611137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 35314194 - 35314136
Alignment:
Q  336 gttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    ||||||||| || ||||||||| ||| || |||||| |||||||||||| |||||||||    
T  35314194 gttttacaacttgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaa 35314136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 23017643 - 23017603
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| ||||||||| |||||| ||||||||||||    
T  23017643 atataatattgtaaataggtcgatagtgtaaaatatgactt 23017603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 8029288 - 8029335
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8029288 taagctaatataatattgtaaataggtcaatagtgcaaaatatgactt 8029335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 41394523 - 41394485
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgac 462  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  41394523 atataatattgtaaataggtcaatagtgcaaaatatgac 41394485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 6387342 - 6387382
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  6387342 atataatattgtaaataggttaatagtgcaaaatatgactt 6387382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 12737518 - 12737565
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  12737518 taagctaatataatattgtaaatatatcaatagtgcaaaatatgactt 12737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 463
Target Start/End: Complemental strand, 24067459 - 24067420
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgact 463  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24067459 atataatattgtaaatagttcaatagtgcaaaatatgact 24067420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 463
Target Start/End: Complemental strand, 18984997 - 18984951
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgact 463  Q
    |||||| ||||||||||| |||||||||||||||| |||| ||||||    
T  18984997 taagctaatataatattgtaaataggtcaatagtgtaaaacatgact 18984951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 464
Target Start/End: Complemental strand, 44977387 - 44977350
Alignment:
Q  427 taatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44977387 taatattgtaaataggtcattagtgcaaaatatgactt 44977350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 24082849 - 24082809
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| ||||||| ||||| |||||||||||||||    
T  24082849 atataatattgtaaataggccaataatgcaaaatatgactt 24082809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 31914035 - 31913988
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  31914035 taagctaatataatattgcaaataagtcaatagtgcaaaatatgactt 31913988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 4840942 - 4840987
Alignment:
Q  419 agctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  4840942 agctaatataatattgtaaataggtcaatagtgcaaaatatgactt 4840987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 29716337 - 29716384
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  29716337 taagctaatataatattgtaaatatgtcaatagtgcaaaatatgactt 29716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 36180162 - 36180117
Alignment:
Q  419 agctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||    
T  36180162 agctaatataatattgtaaatatgtcaatagtgcaaaatatgactt 36180117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 15285962 - 15286002
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  15285962 atataatattgtaaataggtcaatattgcaaaatatgactt 15286002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 16801241 - 16801197
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatga 461  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  16801241 taagctaatataatattgcaaataggtcaatattgcgaaatatga 16801197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 463
Target Start/End: Complemental strand, 29759273 - 29759234
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgact 463  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  29759273 atataatattgtaaatagttcaatagtgcaaaatatgact 29759234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 31561428 - 31561475
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||||||||||| | |||||||||||||    
T  31561428 taagctaatataatattgaaaataggtcaataatacaaaatatgactt 31561475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 19226334 - 19226276
Alignment:
Q  336 gttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    |||||||||||||||||||||| ||| || |||||| ||||||||| || ||| |||||    
T  19226334 gttttacaatttaagagtttacctcaactcgttttagctatgtaaattcgaattgtaaa 19226276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 25869456 - 25869396
Alignment:
Q  334 atgttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    ||||||||||| |  ||||||||| ||| || |||||| |||||||||||| |||||||||    
T  25869456 atgttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaa 25869396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 40317114 - 40317161
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  40317114 taagctaatataatattgcaaataggtcaatagtgcaaaatataactt 40317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 40327188 - 40327235
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  40327188 taagctaatataatattgcaaataggtcaatagtgcaaaatataactt 40327235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 24965927 - 24965972
Alignment:
Q  419 agctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  24965927 agctaatataatattgtaaataggtcaatagtgcaaaatatgactt 24965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 12754966 - 12754926
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  12754966 atataatattgtaaataggtcaatagtgcaaaatatgactt 12754926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 29509496 - 29509543
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||| ||||| |||||||||||||||||||||||| ||||    
T  29509496 taagctaatatattattgtaaataggtcaatagtgcaaaatataactt 29509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 32890543 - 32890496
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||| ||||| |||||||||||||||||||||||| ||||    
T  32890543 taagctaatatattattgtaaataggtcaatagtgcaaaatataactt 32890496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 50517760 - 50517713
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  50517760 taagctaatataatattataaatagatcaatagtgcaaaatatgactt 50517713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 26955910 - 26955870
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||||| || ||||||||||| |||||||||||||||||    
T  26955910 atataatagtgtaaataggtcaaaagtgcaaaatatgactt 26955870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 29965836 - 29965896
Alignment:
Q  333 aatgttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaa 393  Q
    |||||||||||| |  | ||||||| ||| || |||||| |||||||||||||||||||||    
T  29965836 aatgttttacaactcgaaagtttacctcaactcgttttagctatgtaaactcaaatcgtaa 29965896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 41206853 - 41206909
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgacttgagtataat 473  Q
    |||||| ||||||||||| ||||| ||||||| |  |||||||||||||| ||||||    
T  41206853 taagctaatataatattgtaaatatgtcaatattataaaatatgacttgattataat 41206909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 53573782 - 53573822
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  53573782 atataatattgtaaatagaacaatagtgcaaaatatgactt 53573822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 54561903 - 54561839
Alignment:
Q  330 gtcaatgttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    ||||| ||||||||| |  ||||||||| ||| || |||||| |||||||||||| |||||||||    
T  54561903 gtcaaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaa 54561839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 42242465 - 42242418
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42242465 taagctaatataatattgtaaataggtcaatagtgcaaaatatgactt 42242418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 31846608 - 31846648
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  31846608 atataatattgtaaataggtcaatagtgcaaaatatgactt 31846648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 9731610 - 9731563
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||    
T  9731610 taagctaatatgatattgtaaataggtcaatagtgcaaaatatgactt 9731563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 2307995 - 2308031
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatg 460  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2307995 atataatattgtaaataggtcaatagtgcaaaatatg 2308031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 18727052 - 18727099
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  18727052 taagctaatataatattgtaaattagtcaatagtgcaaaatatgactt 18727099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 28546347 - 28546300
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  28546347 taagctaatagaatattgcaaataggtcaataatgtaaaatatgactt 28546300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 30851023 - 30850976
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||    
T  30851023 taagctaatataatattataaatgggtcaatagtgcaaaatatgactt 30850976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 33263548 - 33263485
Alignment:
Q  331 tcaatgttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    |||| ||||||||| |  ||||||||| ||| ||||||||| |||||||||||| |||||||||    
T  33263548 tcaaggttttacaactcgagagtttacctcaacttgttttagctatgtaaactcgaatcgtaaa 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 40830298 - 40830251
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||||||||||||| ||||| ||||||    
T  40830298 taagctcatataatattgtaaataggtcaatagtgtaaaatgtgactt 40830251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 43304717 - 43304757
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||| |||||| |||| |||||||||||||||||    
T  43304717 atataatattgtaaatagatcaacagtgcaaaatatgactt 43304757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 21010367 - 21010423
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgacttgagtataat 473  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||| | ||||||    
T  21010367 taagctaatatgatattgcaaatagatcaatagtgcaaaatatgacttaattataat 21010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 28900266 - 28900313
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  28900266 taagctaatataatattgtaaataggtcaatagtgaaaaatatgactt 28900313  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 21009964 - 21010025
Alignment:
Q  333 aatgttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    |||||||||||| |||||||||||| ||| || ||||||| |||||||| ||||||| ||||    
T  21009964 aatgttttacaacttaagagtttacctcaactcgttttacttatgtaaattcaaatcttaaa 21010025  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 32567762 - 32567809
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| ||||| || ||||||||||||||||||||    
T  32567762 taagctaatataatattgtaaataagtaaatagtgcaaaatatgactt 32567809  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 394
Target Start/End: Original strand, 7834997 - 7835055
Alignment:
Q  336 gttttacaatttaagagtttacatcatcttgttttacctatgtaaactcaaatcgtaaa 394  Q
    ||||||||| || ||||||||| ||| || |||||| |||||||||||| |||||||||    
T  7834997 gttttacaacttgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaa 7835055  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 464
Target Start/End: Original strand, 31534539 - 31534588
Alignment:
Q  415 tttaagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||||| ||||||||||| ||||| ||| || ||||||||||||||||    
T  31534539 tttaagctaatataatattgtaaataagtcgatggtgcaaaatatgactt 31534588  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 24202763 - 24202723
Alignment:
Q  424 atataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    ||||||||||  |||||||||||||||| ||||||||||||    
T  24202763 atataatattataaataggtcaatagtgtaaaatatgactt 24202723  T

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Target: scaffold0573 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Complemental strand, 9528 - 9481
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgactt 464  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  9528 taagctaatataatattgtaaataggtcaatagtgaaaaatatgactt 9481  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 469
Target Start/End: Complemental strand, 89951 - 89899
Alignment:
Q  417 taagctgatataatattgcaaataggtcaatagtgcaaaatatgacttgagta 469  Q
    |||||| |||||||| || |||||||||| |||||||||||||||||| ||||    
T  89951 taagctaatataatactgtaaataggtcagtagtgcaaaatatgacttaagta 89899  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 462
Target Start/End: Complemental strand, 38449 - 38413
Alignment:
Q  426 ataatattgcaaataggtcaatagtgcaaaatatgac 462  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  38449 ataatattgaaaataagtcaatagtgcaaaatatgac 38413  T

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