View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5832_high_12 (Length: 243)

Name: NF5832_high_12
Description: NF5832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5832_high_12
NF5832_high_12
[»] chr4 (48 HSPs)
chr4 (1-225)||(22558616-22558841)
chr4 (65-225)||(2520574-2520734)
chr4 (70-225)||(4142907-4143061)
chr4 (70-225)||(26633823-26633977)
chr4 (70-225)||(22610986-22611140)
chr4 (80-225)||(19853664-19853808)
chr4 (80-225)||(53810840-53810985)
chr4 (78-225)||(13633924-13634072)
chr4 (81-219)||(35348119-35348256)
chr4 (78-225)||(21686393-21686539)
chr4 (79-225)||(43510010-43510156)
chr4 (78-219)||(10496152-10496292)
chr4 (81-225)||(32766326-32766471)
chr4 (78-220)||(9165199-9165342)
chr4 (70-225)||(54021663-54021818)
chr4 (70-220)||(26091071-26091220)
chr4 (93-225)||(24099222-24099355)
chr4 (78-167)||(48257659-48257748)
chr4 (108-225)||(56040796-56040915)
chr4 (78-220)||(9178167-9178309)
chr4 (69-175)||(53443927-53444032)
chr4 (89-225)||(5119159-5119296)
chr4 (70-167)||(22300647-22300744)
chr4 (78-167)||(29961139-29961228)
chr4 (70-166)||(47320612-47320708)
chr4 (78-148)||(56156782-56156852)
chr4 (64-153)||(33920848-33920937)
chr4 (78-172)||(51888421-51888515)
chr4 (70-166)||(9643179-9643276)
chr4 (69-167)||(18935588-18935686)
chr4 (83-153)||(43126694-43126764)
chr4 (78-124)||(51024714-51024760)
chr4 (78-225)||(45418339-45418483)
chr4 (83-175)||(10259097-10259188)
chr4 (101-153)||(40066265-40066317)
chr4 (70-156)||(21662287-21662372)
chr4 (70-156)||(21671051-21671136)
chr4 (121-167)||(36161567-36161613)
chr4 (188-225)||(43095550-43095587)
chr4 (105-152)||(43095471-43095518)
chr4 (70-220)||(27651750-27651899)
chr4 (100-166)||(29121889-29121954)
chr4 (70-172)||(36204586-36204687)
chr4 (134-163)||(13863164-13863193)
chr4 (189-225)||(22038953-22038989)
chr4 (193-225)||(29120515-29120547)
chr4 (188-220)||(40066212-40066244)
chr4 (188-220)||(52944231-52944263)
[»] chr1 (42 HSPs)
chr1 (54-225)||(29738788-29738959)
chr1 (64-225)||(45415338-45415499)
chr1 (55-225)||(5983606-5983777)
chr1 (62-225)||(11462599-11462763)
chr1 (70-225)||(31983965-31984120)
chr1 (81-225)||(7337815-7337959)
chr1 (78-219)||(34878430-34878570)
chr1 (64-225)||(35462189-35462351)
chr1 (104-225)||(32394818-32394938)
chr1 (78-156)||(35484599-35484677)
chr1 (64-225)||(1742060-1742220)
chr1 (70-167)||(10776670-10776767)
chr1 (64-215)||(14872418-14872570)
chr1 (80-150)||(41176977-41177047)
chr1 (70-217)||(51916812-51916959)
chr1 (78-220)||(15435030-15435171)
chr1 (84-167)||(7836976-7837059)
chr1 (72-172)||(18939109-18939209)
chr1 (64-225)||(21947770-21947930)
chr1 (100-225)||(23291795-23291922)
chr1 (64-220)||(45789344-45789498)
chr1 (70-218)||(21686658-21686804)
chr1 (89-216)||(44915449-44915577)
chr1 (66-149)||(4413085-4413168)
chr1 (80-225)||(36894394-36894535)
chr1 (83-167)||(3228068-3228152)
chr1 (64-220)||(26535179-26535329)
chr1 (70-165)||(32679311-32679406)
chr1 (78-172)||(49626703-49626797)
chr1 (92-225)||(8212062-8212195)
chr1 (93-220)||(15836001-15836127)
chr1 (70-216)||(27456325-27456472)
chr1 (105-220)||(50377148-50377260)
chr1 (131-168)||(9341571-9341608)
chr1 (188-225)||(35484543-35484580)
chr1 (70-165)||(44543058-44543153)
chr1 (93-172)||(16161640-16161719)
chr1 (70-167)||(12634952-12635049)
chr1 (84-169)||(31317550-31317635)
chr1 (188-225)||(31918892-31918929)
chr1 (188-220)||(10776615-10776647)
chr1 (189-217)||(13144972-13145000)
[»] chr7 (36 HSPs)
chr7 (52-225)||(48061188-48061362)
chr7 (60-225)||(12141459-12141625)
chr7 (78-220)||(37837616-37837757)
chr7 (78-226)||(9450288-9450436)
chr7 (70-225)||(30756971-30757126)
chr7 (78-220)||(42978400-42978543)
chr7 (70-220)||(19404912-19405061)
chr7 (70-225)||(34899759-34899911)
chr7 (81-225)||(48316964-48317108)
chr7 (70-175)||(8013667-8013772)
chr7 (78-225)||(39171743-39171891)
chr7 (70-225)||(47590098-47590250)
chr7 (78-225)||(13797084-13797230)
chr7 (70-205)||(19296662-19296797)
chr7 (86-225)||(24770055-24770193)
chr7 (80-225)||(40992976-40993121)
chr7 (80-217)||(38798584-38798717)
chr7 (70-172)||(5078598-5078700)
chr7 (78-136)||(45350433-45350491)
chr7 (78-153)||(39329017-39329092)
chr7 (83-153)||(9915941-9916011)
chr7 (83-153)||(9923853-9923923)
chr7 (70-156)||(25287402-25287488)
chr7 (92-220)||(35132757-35132884)
chr7 (78-225)||(4529871-4530018)
chr7 (92-166)||(22087123-22087197)
chr7 (128-218)||(45349962-45350051)
chr7 (70-167)||(24351053-24351150)
chr7 (64-152)||(3224642-3224730)
chr7 (107-167)||(38051276-38051336)
chr7 (92-167)||(1749351-1749426)
chr7 (70-167)||(5348794-5348890)
chr7 (126-167)||(28476063-28476104)
chr7 (70-102)||(24350709-24350741)
chr7 (133-169)||(39228862-39228898)
chr7 (189-225)||(49148244-49148280)
[»] chr8 (38 HSPs)
chr8 (78-226)||(31013720-31013868)
chr8 (56-225)||(23230414-23230583)
chr8 (64-175)||(17693814-17693924)
chr8 (80-213)||(10377491-10377623)
chr8 (78-223)||(37971087-37971229)
chr8 (78-225)||(20559896-20560041)
chr8 (78-225)||(20571458-20571603)
chr8 (70-167)||(25191274-25191371)
chr8 (78-175)||(45446011-45446108)
chr8 (78-217)||(29937907-29938045)
chr8 (78-225)||(7677431-7677577)
chr8 (78-224)||(20553397-20553542)
chr8 (64-225)||(40211455-40211617)
chr8 (71-225)||(7883390-7883544)
chr8 (78-225)||(27110614-27110761)
chr8 (81-220)||(3673241-3673378)
chr8 (78-153)||(8412571-8412646)
chr8 (70-210)||(8980981-8981121)
chr8 (78-165)||(33214840-33214928)
chr8 (78-217)||(28897503-28897642)
chr8 (70-156)||(1236912-1236998)
chr8 (80-225)||(14545052-14545198)
chr8 (69-156)||(15344089-15344176)
chr8 (69-156)||(15433154-15433241)
chr8 (69-156)||(15524458-15524545)
chr8 (78-172)||(1239606-1239700)
chr8 (81-167)||(8443729-8443814)
chr8 (78-145)||(27498565-27498632)
chr8 (70-153)||(36948658-36948742)
chr8 (78-173)||(41684225-41684320)
chr8 (121-167)||(8826043-8826089)
chr8 (70-172)||(24099465-24099565)
chr8 (126-167)||(14916345-14916385)
chr8 (70-167)||(29617665-29617762)
chr8 (188-217)||(36948596-36948625)
chr8 (105-153)||(3240194-3240242)
chr8 (188-220)||(14585601-14585633)
chr8 (189-221)||(41896413-41896445)
[»] scaffold0884 (1 HSPs)
scaffold0884 (52-225)||(2124-2297)
[»] chr6 (25 HSPs)
chr6 (78-225)||(12170286-12170433)
chr6 (80-225)||(33053320-33053465)
chr6 (58-225)||(7515353-7515521)
chr6 (80-225)||(23128411-23128556)
chr6 (80-225)||(605997-606142)
chr6 (78-225)||(3913726-3913872)
chr6 (80-225)||(68153-68297)
chr6 (78-220)||(30894428-30894569)
chr6 (100-225)||(34018373-34018498)
chr6 (86-175)||(29320064-29320153)
chr6 (78-167)||(32328793-32328882)
chr6 (81-153)||(9723602-9723675)
chr6 (78-225)||(32059700-32059845)
chr6 (70-172)||(4010705-4010807)
chr6 (78-216)||(29255603-29255741)
chr6 (78-153)||(9719613-9719691)
chr6 (78-225)||(30608666-30608811)
chr6 (78-124)||(9721763-9721809)
chr6 (78-145)||(127468-127534)
chr6 (70-167)||(30493317-30493413)
chr6 (70-155)||(32191954-32192038)
chr6 (188-225)||(32327369-32327406)
chr6 (188-220)||(11321626-11321658)
chr6 (82-153)||(24227936-24228007)
chr6 (63-153)||(27097834-27097924)
[»] chr5 (27 HSPs)
chr5 (70-225)||(13007010-13007165)
chr5 (70-225)||(6012290-6012445)
chr5 (78-225)||(38597587-38597733)
chr5 (71-225)||(34945204-34945358)
chr5 (80-225)||(9113877-9114022)
chr5 (80-225)||(26825220-26825367)
chr5 (78-220)||(26878236-26878377)
chr5 (78-219)||(38007147-38007286)
chr5 (90-225)||(31391908-31392044)
chr5 (78-225)||(7036017-7036164)
chr5 (82-225)||(25979951-25980094)
chr5 (81-225)||(8096650-8096792)
chr5 (78-225)||(11074052-11074199)
chr5 (78-225)||(24229937-24230086)
chr5 (78-225)||(11977089-11977236)
chr5 (71-225)||(6216676-6216835)
chr5 (78-216)||(13421733-13421869)
chr5 (77-167)||(35850573-35850662)
chr5 (78-167)||(7929988-7930073)
chr5 (93-167)||(14082581-14082655)
chr5 (78-143)||(4770927-4770992)
chr5 (70-220)||(39567077-39567226)
chr5 (185-225)||(4771036-4771076)
chr5 (78-225)||(15571275-15571422)
chr5 (70-220)||(14211015-14211161)
chr5 (70-145)||(8985169-8985244)
chr5 (120-220)||(10722604-10722705)
[»] chr3 (54 HSPs)
chr3 (80-225)||(10232862-10233007)
chr3 (81-225)||(6954848-6954992)
chr3 (78-225)||(47895941-47896088)
chr3 (80-225)||(9998258-9998404)
chr3 (80-225)||(21431417-21431561)
chr3 (54-225)||(12050799-12050971)
chr3 (78-225)||(45568596-45568743)
chr3 (80-225)||(10108030-10108173)
chr3 (78-218)||(40487115-40487254)
chr3 (81-225)||(52923269-52923411)
chr3 (80-225)||(10229266-10229413)
chr3 (78-225)||(9797681-9797826)
chr3 (81-211)||(32701291-32701421)
chr3 (81-225)||(48650886-48651031)
chr3 (93-225)||(54148793-54148925)
chr3 (78-165)||(38545625-38545712)
chr3 (65-225)||(21533961-21534120)
chr3 (80-225)||(36461583-36461728)
chr3 (80-225)||(40556503-40556648)
chr3 (78-226)||(33579658-33579805)
chr3 (81-225)||(47042204-47042348)
chr3 (78-225)||(7449054-7449200)
chr3 (78-225)||(7457196-7457342)
chr3 (70-225)||(43488742-43488904)
chr3 (78-225)||(35865086-35865232)
chr3 (78-221)||(26275950-26276092)
chr3 (70-175)||(12149984-12150089)
chr3 (78-167)||(43016645-43016736)
chr3 (78-165)||(31272018-31272106)
chr3 (70-225)||(50194436-50194590)
chr3 (76-220)||(37040570-37040703)
chr3 (70-165)||(629118-629213)
chr3 (78-153)||(953631-953706)
chr3 (78-153)||(36910879-36910954)
chr3 (188-225)||(36910793-36910830)
chr3 (70-143)||(53808096-53808169)
chr3 (81-152)||(46220471-46220543)
chr3 (70-153)||(14859279-14859362)
chr3 (78-172)||(20465173-20465265)
chr3 (70-172)||(21290024-21290126)
chr3 (105-166)||(4821624-4821685)
chr3 (189-225)||(1649320-1649356)
chr3 (70-225)||(29921834-29921989)
chr3 (70-225)||(29970987-29971142)
chr3 (70-225)||(9319845-9319993)
chr3 (104-175)||(20609099-20609170)
chr3 (93-225)||(23800061-23800195)
chr3 (70-172)||(29249025-29249128)
chr3 (186-225)||(38860271-38860310)
chr3 (78-172)||(7546400-7546494)
chr3 (70-112)||(20988020-20988062)
chr3 (188-225)||(20609042-20609079)
chr3 (125-173)||(51486939-51486987)
chr3 (185-225)||(53508117-53508157)
[»] chr2 (52 HSPs)
chr2 (70-225)||(4778545-4778700)
chr2 (80-223)||(7646274-7646418)
chr2 (80-225)||(7448050-7448194)
chr2 (78-225)||(43397273-43397418)
chr2 (70-225)||(4098895-4099050)
chr2 (78-225)||(31788256-31788403)
chr2 (78-225)||(36943276-36943423)
chr2 (57-225)||(5428020-5428188)
chr2 (80-225)||(9169410-9169554)
chr2 (76-225)||(37876750-37876899)
chr2 (63-225)||(1421456-1421622)
chr2 (78-220)||(18763268-18763409)
chr2 (78-175)||(7678080-7678177)
chr2 (81-167)||(27097615-27097701)
chr2 (78-175)||(12677498-12677595)
chr2 (93-225)||(38444982-38445113)
chr2 (78-225)||(11985383-11985529)
chr2 (70-225)||(4904298-4904443)
chr2 (78-225)||(12648077-12648223)
chr2 (65-151)||(31128974-31129060)
chr2 (78-172)||(35220131-35220222)
chr2 (81-219)||(17994874-17995012)
chr2 (79-170)||(18107943-18108034)
chr2 (119-225)||(19062505-19062609)
chr2 (82-166)||(24461243-24461327)
chr2 (78-225)||(29279723-29279869)
chr2 (70-172)||(32448826-32448928)
chr2 (80-220)||(8809084-8809223)
chr2 (78-143)||(36691666-36691732)
chr2 (189-225)||(4041747-4041783)
chr2 (188-224)||(7678025-7678061)
chr2 (70-130)||(42698922-42698982)
chr2 (70-167)||(29574843-29574938)
chr2 (188-225)||(31128932-31128969)
chr2 (87-172)||(37994084-37994168)
chr2 (64-152)||(37416488-37416576)
chr2 (69-165)||(41694406-41694502)
chr2 (78-125)||(4042229-4042276)
chr2 (129-172)||(6436459-6436502)
chr2 (102-153)||(25509291-25509342)
chr2 (78-165)||(28718160-28718245)
chr2 (80-167)||(39311059-39311145)
chr2 (188-226)||(11833394-11833432)
chr2 (64-153)||(28871987-28872074)
chr2 (126-167)||(3308787-3308828)
chr2 (78-111)||(8809003-8809036)
chr2 (132-165)||(11833338-11833371)
chr2 (92-153)||(13120022-13120083)
chr2 (70-167)||(20145914-20146011)
chr2 (109-166)||(30400250-30400307)
chr2 (185-214)||(36691781-36691810)
chr2 (188-220)||(29173877-29173909)
[»] scaffold0088 (1 HSPs)
scaffold0088 (80-225)||(50578-50723)
[»] scaffold0017 (1 HSPs)
scaffold0017 (78-225)||(32900-33047)
[»] scaffold0026 (1 HSPs)
scaffold0026 (80-225)||(72016-72161)
[»] scaffold0127 (1 HSPs)
scaffold0127 (78-222)||(15282-15425)
[»] scaffold0445 (1 HSPs)
scaffold0445 (70-225)||(1126-1280)
[»] scaffold0219 (1 HSPs)
scaffold0219 (78-217)||(14998-15137)
[»] scaffold0634 (1 HSPs)
scaffold0634 (70-175)||(8296-8401)
[»] scaffold0009 (1 HSPs)
scaffold0009 (70-225)||(58232-58386)
[»] scaffold0087 (1 HSPs)
scaffold0087 (109-175)||(25531-25597)
[»] scaffold0603 (1 HSPs)
scaffold0603 (69-225)||(7499-7652)
[»] scaffold0554 (1 HSPs)
scaffold0554 (81-151)||(10672-10742)
[»] scaffold0262 (1 HSPs)
scaffold0262 (73-153)||(2041-2121)
[»] scaffold0154 (1 HSPs)
scaffold0154 (79-166)||(25124-25209)
[»] scaffold0492 (1 HSPs)
scaffold0492 (93-220)||(12721-12847)
[»] scaffold0121 (1 HSPs)
scaffold0121 (83-225)||(31422-31565)
[»] scaffold0064 (1 HSPs)
scaffold0064 (70-152)||(19261-19342)
[»] scaffold0888 (1 HSPs)
scaffold0888 (126-220)||(1832-1925)
[»] scaffold0049 (1 HSPs)
scaffold0049 (110-225)||(71437-71549)
[»] scaffold0136 (3 HSPs)
scaffold0136 (81-152)||(10264-10333)
scaffold0136 (189-220)||(37947-37978)
scaffold0136 (188-225)||(10193-10230)
[»] scaffold0039 (1 HSPs)
scaffold0039 (127-165)||(92939-92977)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 4e-96; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 22558841 - 22558616
Alignment:
Q  1 atttttctttatgtgagtactaaaccaagcaatcaatcaaattattctctagtcaatgattctcttaggtttttagagagagaaactccaacttctctat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |    
T  22558841 atttttctttatgtgagtactaaaccaagcaatcaatcaaattattctctagtcaatgattctcttagatttttagagagagaaactccaatttctctct 22558742  T
Q  101 aaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||    
T  22558741 aaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctctctacatcttttttcccctttttctttcaat 22558642  T
Q  200 ctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||||||||||    
T  22558641 ctaaataagtggttttcacatctatc 22558616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 65 - 225
Target Start/End: Original strand, 2520574 - 2520734
Alignment:
Q  65 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 164  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  2520574 ttagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatc 2520673  T
Q  165 acctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||| |||||||        ||| ||||| ||||||||||||||||||||||||||||||||    
T  2520674 acccctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatc 2520734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 4143061 - 4142907
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  4143061 tttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 4142962  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||| |||||||||||||||||||||| |||||||||||||||    
T  4142961 tctacatcttttttccccttttctttcaatctaaataagt-gttttcacatctatc 4142907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 26633977 - 26633823
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |    
T  26633977 tttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcacccc 26633878  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    | ||||        | | ||||||||||||||||||||||||||||||||||||||    
T  26633877 tatacatctttttcctc-ttttctttcaatctaaataagtggttttcacatctatc 26633823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 22610986 - 22611140
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||      
T  22610986 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttgacctagaatcaccca 22611084  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  22611085 tctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatc 22611140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 19853808 - 19853664
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||| |||||||        
T  19853808 gagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctacatctt 19853710  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||| ||||||||||||||||||||||||||||||    
T  19853709 ttttccccttttcttccaatctaaataagtggttttcacatctatc 19853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 53810840 - 53810985
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||        
T  53810840 gagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccctctacatctt 53810939  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| |||||||||||| |||||||||| ||||||||||||||    
T  53810940 tttcccccttttctttcaatttaaataagtgattttcacatctatc 53810985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 13633924 - 13634072
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-- 175  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||| |||||||||| |||||||      
T  13633924 gagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatagaatcacccctctacatc 13634022  T
Q  176 nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
            ||| ||||||||||||||||||||||||||||||||||||||    
T  13634023 ttttccccccccttttctttcaatctaaataagtggttttcacatctatc 13634072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 35348119 - 35348256
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||         
T  35348119 agaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcacctctctacatcttt 35348218  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcaca 219  Q
       ||| ||||||||||||||||||||||||||||||||    
T  35348219 tttccc-ttttctttcaatctaaataagtggttttcaca 35348256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 21686539 - 21686393
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||  ||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| || ||||||| |||||||      
T  21686539 gagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc-ttttttgacctaaaatcacccctctacatc 21686441  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||||||||||||||||||    
T  21686440 ttttttccccttttctttcaatctaaataagtggttttcacatctatc 21686393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 225
Target Start/End: Original strand, 43510010 - 43510156
Alignment:
Q  79 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannn 178  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| |||||||||  |||||||       
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatct 43510109  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          || |||||||||||||||||||||||| |||||||| ||||    
T  43510110 ttttttcccttttctttcaatctaaataagtggctttcacatttatc 43510156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 219
Target Start/End: Original strand, 10496152 - 10496292
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||| || ||||      
T  10496152 gagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatcacc-ctatacatc 10496250  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcaca 219  Q
          ||| |||||||| |||||||||||||||||||||||    
T  10496251 ttttttcccattttcttttaatctaaataagtggttttcaca 10496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 32766326 - 32766471
Alignment:
Q  81 agaaactccaacttct--ctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannn 178  Q
    ||||||||||||||||  ||| ||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||       
T  32766326 agaaactccaacttctttctaaaaaattt-tttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaatcacccctctacatct 32766424  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
         ||| |||||||||||||||| |||||| ||||||||||||||    
T  32766425 tttttccccttttctttcaatctaagtaagtgtttttcacatctatc 32766471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 9165342 - 9165199
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcat-tttttgacttagaatcacctctctacan 176  Q
    ||||||||||||||||||||| |||||||||||| ||| || ||||| |||||| |||||||||||||||| ||||| || |||||||||| |||||||     
T  9165342 gagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctacat 9165243  T
Q  177 nnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
            || || ||||||||||||||||||||||||||||||    
T  9165242 ctttttctcccttatctttcaatctaaataagtggttttcacat 9165199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 54021663 - 54021818
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| ||| |||||| |||||||||||||| |||| ||||| ||||  | ||||||||||||||||||||||| || ||||| | |    
T  54021663 tttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccc 54021762  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||  ||||||||||||||||||||||||||||||||| ||||    
T  54021763 tctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatc 54021818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 220
Target Start/End: Complemental strand, 26091220 - 26091071
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||| | ||| |||||||| |||||||||| |||||||||| |    
T  26091220 tttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacccc 26091121  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    |||| |        | | |||| ||||||||||||||||||||||||||||    
T  26091120 tcta-atcttttttctccttttatttcaatctaaataagtggttttcacat 26091071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 24099355 - 24099222
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctacannnnnnnncccttttt 191  Q
    |||||| |||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||| |||||||| | |||||||        ||| ||||    
T  24099355 ttctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttcccctttt 24099256  T
Q  192 ctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||| ||||||||||||||    
T  24099255 ctttcaatctaaataagtgattttcacatctatc 24099222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 48257748 - 48257659
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  48257748 gagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatcacc 48257659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 56040915 - 56040796
Alignment:
Q  108 ctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaat 205  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||| |||||||         ||||| ||||||||||||||||    
T  56040915 ctttctccttcgttcactgaggagaggtggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaat 56040816  T
Q  206 aagtggttttcacatctatc 225  Q
    ||||||||||||||||||||    
T  56040815 aagtggttttcacatctatc 56040796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 9178167 - 9178309
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| ||  |||||| |||| |||||||||||||| |||||  |||||||||||| ||||||||||||||||| ||||||||||  ||||||      
T  9178167 gagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacccttctacatc 9178266  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
           || |||||||||||||||||||| ||||||||||||    
T  9178267 tttttctcccttttctttcaatctaaataaatggttttcacat 9178309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 53443927 - 53444032
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacct 168  Q
    |||||||| |||| ||||| |||||||||| |||||||| |||||| |||||||||||||||| | ||||||||||||| |||||||| ||||| ||||     
T  53443927 gtttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtca-tttttgacctagaaacaccc 53444025  T
Q  169 ctctaca 175  Q
    |||||||    
T  53444026 ctctaca 53444032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 5119159 - 5119296
Alignment:
Q  89 caacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacctctctacannnnnnnnccct 187  Q
    |||||||| | |||||||| |||||||||| |||||  |||||||||||||||| |||| |||||| || |||||||||| |||||||        |||     
T  5119159 caacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaatcacccctctacatctttttccccc 5119258  T
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    | ||||||||||||||||||||||||||||||| ||||    
T  5119259 tcttctttcaatctaaataagtggttttcacatatatc 5119296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 22300647 - 22300744
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||| |||  || | ||||||| ||||||||||||||||||||||| || |||||||    
T  22300647 tttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacc 22300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 29961228 - 29961139
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||| || ||||| || |||||||| |||||||||| ||||||||||    
T  29961228 gagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttgacatagaatcacc 29961139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 47320708 - 47320612
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||| |||| |||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  47320708 tttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcac 47320612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 56156852 - 56156782
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcat 148  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||  |||| |||||||||||||||||    
T  56156852 gagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 33920848 - 33920937
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||| ||||||| |||||||||| |||||| ||  |||||||||||||| |||| ||||| ||| | ||||||||||||||||||||||    
T  33920848 cttagttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttt 33920937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 51888515 - 51888421
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||||||| |||||| ||| ||   |||||||||| |||  |||| ||||||||||||||||||||||||||||||| | |||||||| ||||    
T  51888515 gagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattgaatcacccctct 51888421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 9643179 - 9643276
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggagggg-tggttttaggtcattttttgacttagaatcac 166  Q
    ||||||| ||||||||||||||||||||| |||  ||||||| || || | |||| || |||||| |||||||| ||||||||||||| |||||||||    
T  9643179 tttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcac 9643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 18935588 - 18935686
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||||||| |||||||||||   ||||||| |||  |||||| ||| |||| |||| ||||||||||| ||| |||||| |||||||| ||||||||||    
T  18935588 gtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgacctagaatcacc 18935686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 43126694 - 43126764
Alignment:
Q  83 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||||||| |||||||||||| |  ||||||||| || |||||||| ||||||||| ||||||    
T  43126694 aaactccaacttctctctaaactttctttttttttcgttcatcgaagaggggtgattttaggtcttttttt 43126764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 51024760 - 51024714
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcat 124  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  51024760 gagagaaactccaacttctctctatactttctttctccttcgttcat 51024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 45418339 - 45418483
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||| ||||| |||||||||| ||||  || |||||||| | ||||| ||||||   |||||||||||||||||||||| |||||||| | |||||||      
T  45418339 gagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacctagaatcatccctctacacc 45418435  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  |||||| ||||| |||||||| ||||||||||| ||||    
T  45418436 tcttttcctcttttctctcaatataaataagaggttttcacatatatc 45418483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 10259188 - 10259097
Alignment:
Q  83 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| |  ||   ||||||||||||| |||||||| || ||||||| |||||||    
T  10259188 aaactccaacttctctctaaacattctttctccttcgtttattaaaaagaactggttttaggtca-tttttgacctaaaatcacccctctaca 10259097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 40066317 - 40066265
Alignment:
Q  101 aaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  40066317 aaactttctttctcattcgttcattgaattggggtggttttaggtcatttttt 40066265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 21662287 - 21662372
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    ||||||| || ||||  ||||| || ||| |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  21662287 tttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattcac-gaggaggggtggttttaggtcattttttgac 21662372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 21671051 - 21671136
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    ||||||| || ||||  ||||| || ||| |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  21671051 tttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattcac-gaggaggggtggttttaggtcattttttgac 21671136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 36161567 - 36161613
Alignment:
Q  121 tcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||    
T  36161567 tcatcgaggagaggtggttttaggtcattttttgacctagaatcacc 36161613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 43095550 - 43095587
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43095550 ttttctttcaatctaaataagtggttttcacatatatc 43095587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 43095471 - 43095518
Alignment:
Q  105 tttctttctccttcgttcattgaggaggggtggttttaggtcattttt 152  Q
    |||||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  43095471 tttctttctccttcattcgttgaggaagggtagttttaggtcattttt 43095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 27651750 - 27651899
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||| ||   ||||||| |||| |||||| ||| |||  |||| ||||||||||| | |||||||| |||||||| ||| ||||||      
T  27651750 tttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctaggatcaccca 27651849  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    ||| ||        |||  |||||||||||||||||||||| |||||||||    
T  27651850 tctgcatcttttttccc-atttctttcaatctaaataagtgattttcacat 27651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 29121954 - 29121889
Alignment:
Q  100 taaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    |||| ||| |||||||||||||||| ||||| |  |||||||||||||||||||||| || ||||||    
T  29121954 taaattttatttctccttcgttcatcgaggatga-tggttttaggtcattttttgacctaaaatcac 29121889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 36204687 - 36204586
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||| ||||||| ||||||| ||   |||||||||| |||  ||||  |||| || ||||||||||||||||||| || |||||||||| |    
T  36204687 tttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacccc 36204589  T
Q  170 tct 172  Q
    |||    
T  36204588 tct 36204586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 13863164 - 13863193
Alignment:
Q  134 gtggttttaggtcattttttgacttagaat 163  Q
    ||||||||||||||||||||||||||||||    
T  13863164 gtggttttaggtcattttttgacttagaat 13863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 22038989 - 22038953
Alignment:
Q  189 tttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  22038989 tttctttctatctaaataagtgattttcacatctatc 22038953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 29120547 - 29120515
Alignment:
Q  193 tttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||||||| ||||    
T  29120547 tttcaatctaaataagtggttttcacatatatc 29120515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 40066244 - 40066212
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacat 220  Q
    |||||||||||| ||||||||||||||||||||    
T  40066244 ttttctttcaatataaataagtggttttcacat 40066212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 52944231 - 52944263
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacat 220  Q
    ||||||||||||||||||||||| |||||||||    
T  52944231 ttttctttcaatctaaataagtgattttcacat 52944263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 29738959 - 29738788
Alignment:
Q  54 caatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29738959 caatgattctcttaggtctttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttt 29738860  T
Q  154 gacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
     || |||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  29738859 tacctagaatcacccctctacatctttttcccctttttctttcaatctaaataagtggttttcacatctatc 29738788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 45415338 - 45415499
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||| ||| |||||||||| |||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||  ||||||    
T  45415338 cttagttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaat 45415437  T
Q  164 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||| |||||||        ||| |||||||||||| |||||||||||||||||||||||||    
T  45415438 cacccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatc 45415499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 5983606 - 5983777
Alignment:
Q  55 aatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttg 154  Q
    |||||||||||||| ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||    
T  5983606 aatgattctcttagatttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttg 5983705  T
Q  155 acttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    || |||||||||   ||||||         ||||||||||||| |||||||||| |||||||||||||||||    
T  5983706 acctagaatcactcgtctacatcttttttcccctttttctttcgatctaaataaatggttttcacatctatc 5983777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 11462763 - 11462599
Alignment:
Q  62 ctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttaga 161  Q
    |||||| || |||| ||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  11462763 ctcttatgtctttatagagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctaga 11462664  T
Q  162 atcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||| |||| ||         |||||||||||||||||||||||||||| |||||||||||||    
T  11462663 atcacccctctgcatcttttttcccctttttctttcaatctaaataagtgggtttcacatctatc 11462599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 31983965 - 31984120
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||| ||||| ||||||    
T  31983965 tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctc 31984064  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||         || ||||||||| ||||||||||||||||||||||| ||||    
T  31984065 tctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatc 31984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 7337959 - 7337815
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||  |||||||||| |||||||         
T  7337959 agaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgatctagaatcacccctctacatcttt 7337860  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
       ||  ||||||||||||||||||||||||||||||||||||||    
T  7337859 tttcctcttttctttcaatctaaataagtggttttcacatctatc 7337815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 34878570 - 34878430
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||   ||||||      
T  34878570 gagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcactcatctacatc 34878471  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcaca 219  Q
           || |||||||||||| |||||||||||||||||||    
T  34878470 tttttt-ccattttctttcaatttaaataagtggttttcaca 34878430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 35462351 - 35462189
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaa 162  Q
    ||||| ||||||| | ||||||||| ||||| ||| |||||||||||||||||||||| |||||| | |||||||||||||||||| |||| || |||||    
T  35462351 cttagttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcattttttttacatagaa 35462252  T
Q  163 tcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||| | |||||||        ||| |||||||||||| |||||||||||||||||||||||||    
T  35462251 tcatccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatc 35462189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 32394818 - 32394938
Alignment:
Q  104 ctttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaa 203  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| ||        ||| ||||||||||||||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttcccc-ttttctttcaatctaa 32394916  T
Q  204 ataagtggttttcacatctatc 225  Q
    || |||||||||||||||||||    
T  32394917 atgagtggttttcacatctatc 32394938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 35484677 - 35484599
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  35484677 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgac 35484599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 1742060 - 1742220
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||| ||| ||||||||||| ||||||| | ||||||| ||||||| |||||||||  ||||  |||||||||||||||||||||||| ||||||    
T  1742060 cttagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaat 1742159  T
Q  164 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||| |||| ||        ||| ||||||||||||||||||||||||||||||||| ||||    
T  1742160 cacccctctccatcttttccccc-ttttctttcaatctaaataagtggttttcacatatatc 1742220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 10776767 - 10776670
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||| ||||||||||    
T  10776767 tttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacc 10776670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 14872418 - 14872570
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||||||| ||||||||||||||||||| | | |||||||||||| |||| ||||| ||| ||| |||||||| |||||||||||||||||||||    
T  14872418 cttagttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaat 14872517  T
Q  164 cacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggtttt 215  Q
    |||  |||||||         |||||||||||||||| |||||||||||||||    
T  14872518 cactcctctacatctttttttccctttttctttcaatgtaaataagtggtttt 14872570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 41176977 - 41177047
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattt 150  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 51916959 - 51916812
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| ||| || ||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| || ||||||       
T  51916959 tttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatcactca 51916860  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttca 217  Q
    ||||||         |  ||||||||||||||||||||||||||||||    
T  51916859 tctacatctttttttctcttttctttcaatctaaataagtggttttca 51916812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 15435171 - 15435030
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||||||||||||||  |||| |||||||| |||| |||||  |||||||| ||||||||||||||||||||  |||||||| | |||||||      
T  15435171 gagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctctacatc 15435072  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
          ||| ||||||||||||||||||||||| |||||||||    
T  15435071 ttttttccc-ttttctttcaatctaaataagtgtttttcacat 15435030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 7837059 - 7836976
Alignment:
Q  84 aactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||||||| ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacc 7836976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 18939109 - 18939209
Alignment:
Q  72 tttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctc 171  Q
    ||||| |||||||||| || ||||||| |||  |||||||||||||| || || |||||| |||||||||||||||||||||||  ||||||||||||||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctc 18939208  T
Q  172 t 172  Q
    |    
T  18939209 t 18939209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 21947930 - 21947770
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||| ||| |||||||||| ||| || ||| ||||||||||||||| ||||||||| ||||| |||||||||||||| | ||||| || ||||||    
T  21947930 cttagttttctagtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggtggttttaggtta-tttttaacctagaat 21947833  T
Q  164 cacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    || |  ||||||         ||| ||||||||||||||||||||||||||||||||||||||    
T  21947832 catccatctacatatttttttccccttttctttcaatctaaataagtggttttcacatctatc 21947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 225
Target Start/End: Complemental strand, 23291922 - 23291795
Alignment:
Q  100 taaactttctttctccttcgttcattgaggaggggtgg---ttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttc 196  Q
    ||||||||||||||||||||||||| ||| | ||||||   ||||||||||||||||||| |||||||||| ||| |||        | | |||||||||    
T  23291922 taaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacccctcgacatcttttttctc-ttttctttc 23291824  T
Q  197 aatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||| ||||    
T  23291823 aatctaaataagtggttttcacatatatc 23291795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 45789344 - 45789498
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||||||| ||||||||||| |  |||||| |||| ||| ||||| |||| ||||| |||||  | |||||||||||||||||||||| ||||||    
T  45789344 cttagttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaat 45789443  T
Q  164 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    |||| |||| ||        |||  ||||||||||| ||||||||||||||||||||    
T  45789444 cacccctctgcatctttttcccc--tttctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 21686658 - 21686804
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| |||||| | | |||| |||||||||| ||||||||| |||||| | || ||||||||||||||||||  |||||||| |||    
T  21686658 tttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaatca-ctc 21686756  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcac 218  Q
    ||||||         || |||||||||||| ||||||||||||||||||    
T  21686757 tctacatctttttt-ccattttctttcaatttaaataagtggttttcac 21686804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 44915449 - 44915577
Alignment:
Q  89 caacttctctataaactttctttctccttcgttcattgaggagggg-tggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccct 187  Q
    |||||||||| ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||| ||||| | |||||||        ||      
T  44915449 caacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaatcatcactctacatcttttttcctc 44915548  T
Q  188 ttttctttcaatctaaataagtggttttc 216  Q
    || |||||| |||||||||||||||||||    
T  44915549 ttatctttccatctaaataagtggttttc 44915577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 4413085 - 4413168
Alignment:
Q  66 taggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt 149  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||||||| ||||||| || ||||||| || |||||||||||||    
T  4413085 taggtctttagagagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt 4413168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 36894535 - 36894394
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    |||||||| |||||||||| |||| |||||||||||   |||||| || ||||||||||| || ||||||||||||| |||| ||||| |||||||        
T  36894535 gagaaacttcaacttctctttaaattttctttctcc---gttcatcgaagaggggtggttctaagtcattttttgacctagagtcacccctctacatctt 36894439  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||  ||||||||| |||||||||||||| |||||||||||||    
T  36894438 ttttcctcttttctttcgatctaaataagtgg-tttcacatctatc 36894394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 3228068 - 3228152
Alignment:
Q  83 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||||||||||||||  |||| ||| |||||||||| |||||  ||||||||||||||||||||||||||| || || |||||||    
T  3228068 aaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatcacc 3228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 26535179 - 26535329
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||| ||| ||||||||||| ||||||||| |||||||||| ||||||||||||||  |||| | |||||||||||     ||||||| ||||||    
T  26535179 cttagttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttagg-----ttttgacctagaat 26535273  T
Q  164 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    |||   ||||||         || |||||||||||||||||||||||||||||||||    
T  26535274 cacacatctacatctttttctcc-ttttctttcaatctaaataagtggttttcacat 26535329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 32679406 - 32679311
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 165  Q
    ||||||| |||||||| |||||||| ||| |||  |||||||||| |||  || | ||||||||||||||||| ||||||||||||| ||||||||    
T  32679406 tttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaatca 32679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 49626703 - 49626797
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    ||||||||||||||||||||| |||   ||| ||||| |||  |||| |||||||||||||||||||||||| |||||| || ||||||| ||||    
T  49626703 gagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcacccctct 49626797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 225
Target Start/End: Complemental strand, 8212195 - 8212062
Alignment:
Q  92 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnncccttttt 191  Q
    ||||||| |||| ||| |||||||||| |||||  |||||||||| |||||| | |||||||||  || |||||||||||||||          | ||||    
T  8212195 cttctctttaaaatttttttctccttcattcatcaaggaggggtgcttttagattattttttgatctacaatcacctctctacatcttttttttcctttt 8212096  T
Q  192 ctttcaatctaaataagtggttttcacatctatc 225  Q
    |||| |||||||||||||||||||||||| ||||    
T  8212095 ctttaaatctaaataagtggttttcacatatatc 8212062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 15836001 - 15836127
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 192  Q
    |||||| | ||||||||||||| ||  |||||  ||||| |||||||||||||||||||||||| |||||||||| || ||||         || |||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctcc-ttttc 15836099  T
Q  193 tttcaatctaaataagtggttttcacat 220  Q
    | ||||| ||||||||||||||||||||    
T  15836100 tatcaatttaaataagtggttttcacat 15836127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 216
Target Start/End: Original strand, 27456325 - 27456472
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtc-attttttgacttagaatcacct 168  Q
    ||||||| |||| ||||| |||||||| | ||||||||||||||||||| ||| | |||||||| ||||||||  ||  |||||| || || ||||||      
T  27456325 tttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggttttaactctttttttttacctaaaatcactc 27456424  T
Q  169 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttc 216  Q
    |||||||        ||  |||||||||||||||||||||||||||||    
T  27456425 ctctacatcttttttcctcttttctttcaatctaaataagtggttttc 27456472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 50377148 - 50377260
Alignment:
Q  105 tttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaa 204  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||| |||||||| | |||| ||        ||| |||||||||||| ||||    
T  50377148 tttctttctccttcgttcatcgaagagga-tggttttaggtcattttttgacctagaatcatccctct-ca-tttttttcccattttctttcaatttaaa 50377244  T
Q  205 taagtggttttcacat 220  Q
    ||||||||||||||||    
T  50377245 taagtggttttcacat 50377260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 9341571 - 9341608
Alignment:
Q  131 ggggtggttttaggtcattttttgacttagaatcacct 168  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9341571 ggggtggttttaggtcattttttgacttagaatcacct 9341608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 35484580 - 35484543
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35484580 ttttctttcaatctaaataagtggttttcacatctatc 35484543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 44543058 - 44543153
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 165  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  |||| ||||| ||||| |||||||| ||| |||||| || |||||    
T  44543058 tttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatca 44543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 16161640 - 16161719
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||| |||| |||||| ||| |||   ||| ||||||||||  |||||||||| |||||||| |||||||||||||||    
T  16161640 ttctctctaaattttcttcctctttcacacatcgaggaggggtaattttaggtcaatttttgacctagaatcacctctct 16161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 12634952 - 12635049
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| ||||||||||| ||||||||| ||   ||| |||||| |||  || | ||||| | |||||||||||||||||| |||| || |||||||    
T  12634952 tttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataatcacc 12635049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 31317550 - 31317635
Alignment:
Q  84 aactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    |||||||  |||||| |||| |||||||||| ||| ||||| |||| |   ||||||||||| |||| ||||| ||||||||||||    
T  31317550 aactccacattctctctaaattttctttctctttcattcatcgaggcgttatggttttaggtaatttgttgacatagaatcacctc 31317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 31918892 - 31918929
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  31918892 ttttctatcaatctaaataagtggttttcacatatatc 31918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 10776647 - 10776615
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacat 220  Q
    |||||||||||||||||||||||||||| ||||    
T  10776647 ttttctttcaatctaaataagtggtttttacat 10776615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 13145000 - 13144972
Alignment:
Q  189 tttctttcaatctaaataagtggttttca 217  Q
    |||||||||||||||||||||||||||||    
T  13145000 tttctttcaatctaaataagtggttttca 13144972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 52 - 225
Target Start/End: Original strand, 48061188 - 48061362
Alignment:
Q  52 gtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 151  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  48061188 gtcaatgattcttttaggtttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcatttt 48061287  T
Q  152 ttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||| | |||||         ||||||||||||||||||||||||||||||||||||||||||    
T  48061288 ttgacttagaatcaccccactacatattttttcccctttttctttcaatctaaataagtggttttcacatctatc 48061362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 12141625 - 12141459
Alignment:
Q  60 ttctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgactta 159  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  12141625 ttcttttaggtttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacata 12141526  T
Q  160 gaatcacctctctacannnnnnnnccc-tttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||| |||||||        ||| ||||| |||||||||||||||||||||||||||||||||    
T  12141525 gaatcacccctctacatcttttttcccttttttatttcaatctaaataagtggttttcacatctatc 12141459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 37837757 - 37837616
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  37837757 gagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 37837658  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
          ||| ||||||||||||||||||||||||||| |||||    
T  37837657 ttttttccc-ttttctttcaatctaaataagtggtttacacat 37837616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 9450436 - 9450288
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||  ||||||      
T  9450436 gagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcacccatctacatc 9450337  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatct 226  Q
          ||| ||||||||||||||||||||||| |||||||||||||||    
T  9450336 ttgtttccccttttctttcaatctaaataagtgattttcacatctatct 9450288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 30757126 - 30756971
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | |||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||| |    
T  30757126 tttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccc 30757027  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||| ||||||||||||||||||||||| ||||||||||||||    
T  30757026 tctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatc 30756971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 42978400 - 42978543
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-n 176  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  42978400 gagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatc 42978499  T
Q  177 nnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
           ||| |||||  ||||||||||||||||||||||||||    
T  42978500 tttttctccccttttcgatcaatctaaataagtggttttcacat 42978543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 70 - 220
Target Start/End: Complemental strand, 19405061 - 19404912
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| ||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||| |    
T  19405061 tttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccc 19404962  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    ||||||         || |||||||||||||||||||||||||||||||||    
T  19404961 tctacatctttttttcc-ttttctttcaatctaaataagtggttttcacat 19404912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 34899911 - 34899759
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||| |||||||||| |    
T  34899911 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcaccgatga---gtggttttaggtcattttttgacctagaatcacccc 34899815  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||         || ||||||||||||||||||||||||||||||||||||||    
T  34899814 tctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatc 34899759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 48317108 - 48316964
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    |||||||| ||||||||| |||| || |||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||| |||||||         
T  48317108 agaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctacatcttt 48317009  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
       ||| |||||||||||| |||||||||||||||||||||||||    
T  48317008 ttcccccttttctttcaatttaaataagtggttttcacatctatc 48316964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 8013772 - 8013667
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||| |||||||||| |    
T  8013772 tttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccc 8013673  T
Q  170 tctaca 175  Q
    ||||||    
T  8013672 tctaca 8013667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 39171891 - 39171743
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-n 176  Q
    |||| |||||||||| | ||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||      
T  39171891 gagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctacatc 39171792  T
Q  177 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
            |||||||||||| |||||||||||||||||||| |||||||    
T  39171791 ttttttttcctttttctttcgatctaaataagtggttttcatatctatc 39171743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 47590098 - 47590250
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||| |||||||||||| |||| |||||||||| ||||||||| ||||||||||| |||||||||| |||||||  |||||||||| |    
T  47590098 tttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtca-tttttgaactagaatcacccc 47590196  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||  | ||||||||||||||||||||||||||||||| ||||    
T  47590197 tctacatttttttccc--tattctttcaatctaaataagtggttttcacatatatc 47590250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 13797230 - 13797084
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| |||| |||||||||| ||||||||| ||||| || ||||||||||||||||||| || |||||||||| |||||||      
T  13797230 gagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccctctacatc 13797131  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| |||||||||||| |||||||||| |||| |||||||||    
T  13797130 tttttcccc-ttttctttcaatttaaataagtgattttaacatctatc 13797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 205
Target Start/End: Original strand, 19296662 - 19296797
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | |||||||||||||||| || |||  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  19296662 tttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 19296761  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaat 205  Q
    ||||||        ||| ||||||||||||||||||    
T  19296762 tctacatcttttttccccttttctttcaatctaaat 19296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 24770055 - 24770193
Alignment:
Q  86 ctccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnncc 185  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||  |||||| |||||||||||||| ||||||||||||| |  ||||||              
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatcatccatctacatctttttttt 24770154  T
Q  186 ctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    | ||||||||||||||||||||||||||||||||| ||||    
T  24770155 c-ttttctttcaatctaaataagtggttttcacatatatc 24770193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 40992976 - 40993121
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnn 178  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||| |||||  ||| |||||||||||||||||||| || ||||||  |||||||        
T  40992976 gagaaactccaacttctctctaaactttagttcttcttcgttcatcgagga-tggtagttttaggtcattttttgacctaaaatcactcctctacatctt 40993074  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
         ||  ||||||||||||||||||||||||||||||||||||||    
T  40993075 tttttccacttttctttcaatctaaataagtggttttcacatctatc 40993121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 217
Target Start/End: Original strand, 38798584 - 38798717
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||    ||||| ||||||||||||||| |||||| ||||||||||  ||||||        
T  38798584 gagaaactccaacttctgtctgaactttctttctcattcgttcat---cgagggatggttttaggtcattctttgacatagaatcacccatctacatctc 38798680  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttca 217  Q
         ||||||||||||||| |||||||||||||||||    
T  38798681 tttt-cctttttctttcaatttaaataagtggttttca 38798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 5078700 - 5078598
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| |||||||||| |||  | ||||| || |||  ||||| |||| ||||| ||||||||||||||||||| |||||||||| |    
T  5078700 tttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacccc 5078601  T
Q  170 tct 172  Q
    |||    
T  5078600 tct 5078598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 45350491 - 45350433
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtg 136  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||    
T  45350491 gagagaaacttcaacttctctctaaactttttttctccttcgttcatagaggaggggtg 45350433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 39329092 - 39329017
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||| ||||| | | |||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||    
T  39329092 gagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttt 39329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 9915941 - 9916011
Alignment:
Q  83 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||||||||  ||||||||||||||||||||| || |||||||| |  ||||||||| ||||||    
T  9915941 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9916011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 9923853 - 9923923
Alignment:
Q  83 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||||||||  ||||||||||||||||||||| || |||||||| |  ||||||||| ||||||    
T  9923853 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 25287488 - 25287402
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||||| ||| | || ||| |||||||||| || ||| ||||||    
T  25287488 tttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttgac 25287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 35132757 - 35132884
Alignment:
Q  92 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnncccttttt 191  Q
    ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| |||||||||| |||||||        |||  |||    
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttccc-cttt 35132855  T
Q  192 ctttcaatctaaataagtggttttcacat 220  Q
    |||| |||||||||||||| |||||||||    
T  35132856 cttttaatctaaataagtgattttcacat 35132884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 4529871 - 4530018
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| || ||||||| |||   ||||||||||||| |||||  | ||| |||| ||||||||||||||||||| ||||| || | | |||||      
T  4529871 gagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacatagaaccatcccgctacatc 4529970  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          |||| ||||||||||||||| |||||  ||||||||| ||||    
T  4529971 ttttttccctctttctttcaatctaagtaagtatttttcacatatatc 4530018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 22087123 - 22087197
Alignment:
Q  92 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    ||||||| |||  |||||||||||||| || || || ||||| ||||||| |||||||||||||| |||||||||    
T  22087123 cttctctctaagttttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaatcac 22087197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 45350051 - 45349962
Alignment:
Q  128 ggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcac 218  Q
    |||||| |||||||||||||||||||||| ||||||||||  |||||          ||||||||||||||| ||||||||||||||||||    
T  45350051 ggagggttggttttaggtcattttttgacctagaatcacccatctac-ttcttttttcctttttctttcaatttaaataagtggttttcac 45349962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 24351150 - 24351053
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| |||||||||||   ||||||| |||  |||||| |||  ||  |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  24351150 tttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 24351053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 3224730 - 3224642
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 152  Q
    ||||| ||||||| |||||||| |||||||| | | |||| |||||||||| |||  || | || || |||||||||||||||||||||    
T  3224730 cttagttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt 3224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 38051336 - 38051276
Alignment:
Q  107 tctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| ||||  ||||| |||||||||||||||||||||| |||| || ||||||||||    
T  38051336 tctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacc 38051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 1749426 - 1749351
Alignment:
Q  92 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 1749351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 5348890 - 5348794
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| || ||||||| || ||||| | |||  |||||||||||||  ||||| |||||| ||| ||||||||| | |||||||| ||||||||||    
T  5348890 tttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggt-gttttaggtaagtttttgacctagaatcacc 5348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 28476063 - 28476104
Alignment:
Q  126 gaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  28476063 gaggaggggtgattttaggtcaatttttgacctagaatcacc 28476104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 24350709 - 24350741
Alignment:
Q  70 tttttagagagagaaactccaacttctctataa 102  Q
    ||||||| |||||||||||||||||||||||||    
T  24350709 tttttagtgagagaaactccaacttctctataa 24350741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 39228862 - 39228898
Alignment:
Q  133 ggtggttttaggtcattttttgacttagaatcacctc 169  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  39228862 ggtgattttaggtcattttttgacctagaatcacctc 39228898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 49148280 - 49148244
Alignment:
Q  189 tttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  49148280 tttctttcaaactaaataagtggttttcacatatatc 49148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 31013868 - 31013720
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  31013868 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 31013769  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatct 226  Q
          ||| |||||||||||||||||||||||||||||||||||||||    
T  31013768 tttttcccccttttctttcaatctaaataagtggttttcacatctatct 31013720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 56 - 225
Target Start/End: Original strand, 23230414 - 23230583
Alignment:
Q  56 atgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 155  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||    
T  23230414 atgattctcttaggtctttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttga 23230512  T
Q  156 cttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |  | ||||||| |||||||         |||||||||||||||||||||||||||||||||| |||||||    
T  23230513 ccaaaaatcacccctctacatcttttttcccctttttctttcaatctaaataagtggttttcatatctatc 23230583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 17693924 - 17693814
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 163  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  17693924 cttagttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcat-ttttgacctagaat 17693826  T
Q  164 cacctctctaca 175  Q
    || | |||||||    
T  17693825 catccctctaca 17693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 10377491 - 10377623
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||  ||||||        
T  10377491 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa-caccaatctacatctt 10377589  T
Q  180 nnnnccctttttctttcaatctaaataagtggtt 213  Q
        ||| || |||||||||||||||||||||||    
T  10377590 tttcccccttctctttcaatctaaataagtggtt 10377623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 223
Target Start/End: Original strand, 37971087 - 37971229
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||||   |||||||||||||||||||||| |||||||||| |||||||      
T  37971087 gagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag---tggttttaggtcattttttgacctagaatcacccctctacatc 37971183  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatcta 223  Q
          ||| ||||||||||||||||||||||| ||||||||||||    
T  37971184 ttttttccccttttctttcaatctaaataagtgattttcacatcta 37971229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 20560041 - 20559896
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||      
T  20560041 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca-- 20559944  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||| ||||||||||||||    
T  20559943 ttttttccccttttctttcaatctaaataagtgattttcacatctatc 20559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 20571603 - 20571458
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||      
T  20571603 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca-- 20571506  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||| ||||||||||||||    
T  20571505 ttttttccccttttctttcaatctaaataagtgattttcacatctatc 20571458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 25191371 - 25191274
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||||||||    
T  25191371 tttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacc 25191274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 45446108 - 45446011
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||||||| |||||||||    
T  45446108 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatcatctctctaca 45446011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 29937907 - 29938045
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||| |||||||||| |||||||      
T  29937907 gagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatca-tttttgacctagaatcacccctctacatc 29938005  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttca 217  Q
          | | ||||||||||| ||||||||||||||||||    
T  29938006 ttttttcgccttttctttcaacctaaataagtggttttca 29938045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 7677577 - 7677431
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||| |||||| || |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  7677577 gagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca-t 7677479  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          | ||||||||||| |||||||||| | |||||||||| ||||    
T  7677478 ctcattcactttttctttcgatctaaataaattgttttcacatatatc 7677431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 20553542 - 20553397
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| ||| |||||||||| | | |||      
T  20553542 gagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcaccccacaacatt 20553443  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctat 224  Q
          ||| ||||||||||||||||||||||| |||||||||||||    
T  20553442 ttttttccc-ttttctttcaatctaaataagtgattttcacatctat 20553397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 40211617 - 40211455
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaa 162  Q
    ||||| ||| ||| |||||||||||||| |||||| |||| ||||||||||||||||| || |||||||||||| ||||||| | ||||||||| |||||    
T  40211617 cttagttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaa 40211518  T
Q  163 tcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||| |||||||         |  ||||||||||||||||||||| ||||||||||||||||    
T  40211517 tcacccctctacatcttttttactcttttctttcaatctaaataagcggttttcacatctatc 40211455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 7883544 - 7883390
Alignment:
Q  71 ttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 170  Q
    |||||| |||||||||| |||||||| | |||| |||||||||| ||||||||| || || | ||||||||||||||| ||||||  || ||||||| ||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcat-ttttgatctataatcacccct 7883446  T
Q  171 ctacannnnnnnnccct-ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||        |||| ||||||||||||||||||||||||||||||||||||||    
T  7883445 ctacatcttttttccctcttttctttcaatctaaataagtggttttcacatctatc 7883390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 27110761 - 27110614
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| || || ||||||||||||||||||||||||  || ||||||   ||||||      
T  27110761 gagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacacatctacatc 27110662  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
           |  ||||||||||||||||||||||||| ||||||| ||||    
T  27110661 ttttttactcttttctttcaatctaaataagtggtcttcacatatatc 27110614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 3673241 - 3673378
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||| || ||||| ||||||||||||| |||||||| |||||||| | |||||||         
T  3673241 agaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca-tttttgacctagaatcatccctctacatcttt 3673339  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacat 220  Q
       ||| |||||||||||||||||||||||||| ||||||    
T  3673340 tgcccc-ttttctttcaatctaaataagtggttatcacat 3673378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 8412646 - 8412571
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  8412646 gagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 8980981 - 8981121
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || | ||||||||||||||||||||||||||||||| || ||||||| |    
T  8980981 tttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccc 8981080  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtg 210  Q
    | | ||        ||| |||||||||||||||||||||||    
T  8981081 tatgcatcctttttccccttttctttcaatctaaataagtg 8981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 33214928 - 33214840
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtc-attttttgacttagaatca 165  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||    
T  33214928 gagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatca 33214840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 28897503 - 28897642
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||| | |||||| || |||| |||| ||| | ||||||||||||||||| ||||||||||||  || ||||||| |||||||      
T  28897503 gagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcacccctctacatc 28897602  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttca 217  Q
          ||  ||||||||||||||||||||||||||||||    
T  28897603 ttttttcctcttttctttcaatctaaataagtggttttca 28897642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 1236998 - 1236912
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  1236998 tttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgac 1236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 14545198 - 14545052
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca-cctctctacannn 178  Q
    ||||||||||||||||||| ||||     |||||||||| ||| || |||| | ||||||||||||||||||||||| || ||||| ||||||||||       
T  14545198 gagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttgacctaaaatcaccctctctacatct 14545099  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          |  ||||||||||||||||||||||||||||||||| ||||    
T  14545098 ttttttctcttttctttcaatctaaataagtggttttcacatatatc 14545052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 15344089 - 15344176
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15344089 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15344176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 15433154 - 15433241
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15433154 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 15524458 - 15524545
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15524458 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15524545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 1239700 - 1239606
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||||||| |||||||||| |||  |||| ||||| | || |||| ||||||||||||||||||||| || |||||| || ||||||| ||||    
T  1239700 gagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcacccctct 1239606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 8443814 - 8443729
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||| ||||| |||| | |||| |||||||||| ||| |||||  || |||||||||||||||||||||||| |||||||||||||    
T  8443814 agaaattccaatttctttttaaattttctttctctttcattcatcaag-aggggtggttttaggtcattttttaacttagaatcacc 8443729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 27498632 - 27498565
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 145  Q
    |||||||||| |||||| ||| ||| ||||||||||||||| ||||| || |||||| ||||||||||    
T  27498632 gagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 36948742 - 36948658
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcatt-gaggaggggtggttttaggtcatttttt 153  Q
    ||||||| |||| ||||| |||||||||| ||||||||||||||||||  ||||||  ||  ||||| |||||||||| ||||||    
T  36948742 tttttagtgagacaaacttcaacttctctttaaactttctttctcctttattcattatagagggggtagttttaggtcgtttttt 36948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 41684225 - 41684320
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 173  Q
    |||||||||||||||||| || ||  ||||||||||||||| |||||  |||    |||||||||||||| ||||| || || ||||||| |||||    
T  41684225 gagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagtttttaacctaaaatcacccctcta 41684320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 8826043 - 8826089
Alignment:
Q  121 tcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  8826043 tcatcgaggatgggtggttttaggtcattttttgatctagaatcacc 8826089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 24099565 - 24099465
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| |||||||||| ||   |||||||||| |||  |||| ||| |||| ||| |||||||||| ||||||| |||||||||| |    
T  24099565 tttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg-tggctttaggtcat-ttttgacctagaatcacccc 24099468  T
Q  170 tct 172  Q
    |||    
T  24099467 tct 24099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 14916385 - 14916345
Alignment:
Q  126 gaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  14916385 gaggaggggtggttttaggtcat-ttttgacctagaatcacc 14916345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 29617762 - 29617665
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| |||||||| | |||||||||| |||| ||| |||||| |||  | || || |||  || |||||||||||||||||||| || |||||||    
T  29617762 tttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatcacc 29617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 36948625 - 36948596
Alignment:
Q  188 ttttctttcaatctaaataagtggttttca 217  Q
    ||||||||||||||||||||||||||||||    
T  36948625 ttttctttcaatctaaataagtggttttca 36948596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 3240194 - 3240242
Alignment:
Q  105 tttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||| | || || ||||||||||||| ||||||||||||||||    
T  3240194 tttctttctcttccggtcgttgaggaggggtgattttaggtcatttttt 3240242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 14585601 - 14585633
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacat 220  Q
    ||||||||||||||||||||||| |||||||||    
T  14585601 ttttctttcaatctaaataagtgattttcacat 14585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 41896413 - 41896445
Alignment:
Q  189 tttctttcaatctaaataagtggttttcacatc 221  Q
    |||||||||||||||||||||| ||||||||||    
T  41896413 tttctttcaatctaaataagtgattttcacatc 41896445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 225
Target Start/End: Complemental strand, 2297 - 2124
Alignment:
Q  52 gtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||| ||||||||    
T  2297 gtcaatgattctcttaggtttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcatttt 2198  T
Q  152 ttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||  |||||||||| |||||||         |||||||||||||||||||||||||||| |||||||||||||    
T  2197 ttgatctagaatcacccctctacatcttttttcccctttttctttcaatctaaataagtgg-tttcacatctatc 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 12170286 - 12170433
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  12170286 gagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 12170385  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||||||||||||||||||    
T  12170386 ttttttccccttttctttcaatctaaataagtggttttcacatctatc 12170433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 33053465 - 33053320
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||        
T  33053465 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctctacatctt 33053366  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  33053365 ttttccccttttctttcaatctaaataagtggttttcacatctatc 33053320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 7515521 - 7515353
Alignment:
Q  58 gattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgac 156  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||| | | |||||||||    
T  7515521 gattctcttaggtttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgac 7515422  T
Q  157 ttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
     |||||||||| |||||||        ||||||||||| ||||||||||||||||||||||||||||||    
T  7515421 ctagaatcacccctctacattttgttcccctttttcttccaatctaaataagtggttttcacatctatc 7515353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 23128411 - 23128556
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||        
T  23128411 gagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctctacatctt 23128510  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| |||||||||| |||||||||||||||||||||||||||    
T  23128511 tttccccattttctttcattctaaataagtggttttcacatctatc 23128556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 605997 - 606142
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||| |||||| |||||||        
T  605997 gagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctctacatctt 606096  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  606097 ttttccccttttctttcaatctaaataagtggttttcacatctatc 606142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 3913872 - 3913726
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||| |||  ||      
T  3913872 gagagaaactccaacttctctctaaactttctttctcctttgttcatcgagga-gggtggttttaggtcattttttgacctagaatcacccctccgcatc 3913774  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| || |||||||||||||||||||||||||||||||||||    
T  3913773 ttttttcccattctctttcaatctaaataagtggttttcacatctatc 3913726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 68297 - 68153
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca-cctctctacannn 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | |||||||| |||||||| || |||||||       
T  68297 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggt-aatttttgacctagaatcaccccctctacatct 68199  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
         ||| |||||||| |||||||||||||||||||||||||||||    
T  68198 ttttcccc-ttttcttttaatctaaataagtggttttcacatctatc 68153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 30894428 - 30894569
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| |||||||| ||||||||||||| || |||||||||||||||||| |||||||||||| |||||||||| |||||||      
T  30894428 gagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctacatc 30894526  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
           || |||||||||||||||||||| ||||||||||||    
T  30894527 tgtttttcccttttctttcaatctaaataactggttttcacat 30894569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 225
Target Start/End: Original strand, 34018373 - 34018498
Alignment:
Q  100 taaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaat 199  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||| |||||||||| |||||||        ||| ||||||||||||    
T  34018373 taaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttcaat 34018472  T
Q  200 ctaaataagtggttttcacatctatc 225  Q
     |||||||||||||||||||| ||||    
T  34018473 ttaaataagtggttttcacatatatc 34018498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 29320153 - 29320064
Alignment:
Q  86 ctccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  |||||||||| |||||||    
T  29320153 ctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctctaca 29320064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 32328882 - 32328793
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||| |||||||| || |||||||    
T  32328882 gagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatcacc 32328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 9723675 - 9723602
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcat-tgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||    
T  9723675 agaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 32059700 - 32059845
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||| ||||| |||||| ||||| ||||||||| ||| ||||| |||||  |||||||||| |||||| |||||| |||||||| |  ||||||      
T  32059700 gagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatcatccttctacatc 32059799  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  |||||||||||||||||||||| |||||||||| ||||    
T  32059800 tttttccc--ttttctttcaatctaaataagtagttttcacatgtatc 32059845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 4010807 - 4010705
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||| || ||||||| |||  |||||||||||||  || |||||||||| |||  ||||| |||||||||||| |||||||||| |    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccc 4010708  T
Q  170 tct 172  Q
    |||    
T  4010707 tct 4010705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 29255741 - 29255603
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||| ||||||||||||  ||||| |||||||||||||||||| || |||  ||||||||| |||||| |||||  || |||||    ||||||      
T  29255741 gagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatctaaaatcattcatctacatc 29255642  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttc 216  Q
          ||| |||||||||||||||||||||||||||||    
T  29255641 tttttcccccttttctttcaatctaaataagtggttttc 29255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 9719691 - 9719613
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcat-tgagga--ggggtggttttaggtcatttttt 153  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||  |||||  ||||| ||||||||||| |||||    
T  9719691 gagagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggggtagttttaggtcaattttt 9719613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 30608811 - 30608666
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||| | ||| | | |||| ||| |||||||||| | |||| |||| || |||||||||||||| ||||||| |||||||||| |||||||      
T  30608811 gagagaaactcaaccttttgtttaaattttttttctccttcatccattaaggatggatggttttaggtcat-ttttgacctagaatcacccctctacata 30608713  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
           || |||||||||||||||||| |||||||||||||| ||||    
T  30608712 tttttctcc-ttttctttcaatctaaattagtggttttcacatatatc 30608666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 9721809 - 9721763
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcat 124  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  9721809 gagagaaactccaacttctctctaaactttctttctcgttcgttcat 9721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 127468 - 127534
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 145  Q
    ||||||||  ||||||||||| ||||| || |||||| ||||||||||||||| ||||||||||||||    
T  127468 gagagaaatcccaacttctctctaaacgttttttctctttcgttcattgagga-gggtggttttaggt 127534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 30493317 - 30493413
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| ||||||||||||||| ||||| |||  ||||||| || |||  || | || || |||||||||| |||||||||||||| ||||||||||    
T  30493317 tttttagtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaaga-gggtggttttcggtcattttttgacctagaatcacc 30493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 32192038 - 32191954
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 155  Q
    ||||||||||||||||||| || || | | |||  |||||||||| ||| |||||  |||||||||||||||||||| ||||||||    
T  32192038 tttttagagagagaaactctaattt-tgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttga 32191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 32327406 - 32327369
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||| |||||||||||||||||||||||||    
T  32327406 ttttctttcaatataaataagtggttttcacatctatc 32327369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 11321658 - 11321626
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacat 220  Q
    |||||||||||||||||||||||||||||||||    
T  11321658 ttttctttcaatctaaataagtggttttcacat 11321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 24228007 - 24227936
Alignment:
Q  82 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||||| |||  || |||| ||||| |||| |||||  |||||| ||||||||||||||||||||    
T  24228007 gaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttt 24227936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 27097924 - 27097834
Alignment:
Q  63 tcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||| ||||||| |||||||||| ||  |||||| |||  |||||||||| |||  ||||| |||| | ||||||||||||| ||||||    
T  27097924 tcttagttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt 27097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 13007010 - 13007165
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  13007010 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccc 13007109  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  13007110 tctacaccttttttcccattttctttcaatctaaataagtggttttcacatctatc 13007165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 6012445 - 6012290
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  6012445 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccc 6012346  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||         || ||||||||||||||||||||||| ||||||| ||||||    
T  6012345 tctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatc 6012290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 38597587 - 38597733
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||||      
T  38597587 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccctctacatc 38597686  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| | |||||||||| |||||||||| ||||||||||||||    
T  38597687 ttttttccc-tattctttcaatttaaataagtgattttcacatctatc 38597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 34945204 - 34945358
Alignment:
Q  71 ttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 170  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||||||||| || || || |||||||||||||||||||||| ||||||||||  |    
T  34945204 ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcaccctt 34945303  T
Q  171 ctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  34945304 ctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatc 34945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 9114022 - 9113877
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||        
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatctt 9113923  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| |||||||| |||||||||||||||||||||||||||||    
T  9113922 ttttcccattttcttttaatctaaataagtggttttcacatctatc 9113877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 26825220 - 26825367
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt--gacttagaatcacctctctacann 177  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||| |||||||      
T  26825220 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatc 26825319  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||||||||||| ||||||    
T  26825320 ttttttccccttttctttcaatctaaataagtggttttcacgtctatc 26825367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 26878377 - 26878236
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| |||| |||||||  ||||||||||||||||||      
T  26878377 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatcacctctctacatc 26878279  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
          ||| |||||||||||||||||||||||||||||||||    
T  26878278 tttttcccccttttctttcaatctaaataagtggttttcacat 26878236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 219
Target Start/End: Original strand, 38007147 - 38007286
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| |||||||      
T  38007147 gagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctctacatc 38007246  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcaca 219  Q
          ||  |||||||||||| |||||||||||||||||||    
T  38007247 tttttccc--ttttctttcaatttaaataagtggttttcaca 38007286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 31392044 - 31391908
Alignment:
Q  90 aacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnnnnnnnccctt 188  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||         ||| |    
T  31392044 aacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctcccct 31391945  T
Q  189 tttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||  |||||||||||||||||||||||||| ||||    
T  31391944 tttcgatcaatctaaataagtggttttcacatttatc 31391908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 7036017 - 7036164
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||| || ||||||   ||||||      
T  7036017 gagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcactcatctacatc 7036116  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  ||||||||||||||||||||||||||||||||| ||||    
T  7036117 ttttttcctcttttctttcaatctaaataagtggttttcacatatatc 7036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 25979951 - 25980094
Alignment:
Q  82 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnn 181  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||| |||  ||||||          
T  25979951 gaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctggaattacccttctacatctttt 25980050  T
Q  182 nnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
      ||| |||  |||||| |||||||||||||||| |||||||||    
T  25980051 ttcccctttgttttcaacctaaataagtggttttaacatctatc 25980094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 8096792 - 8096650
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    ||||| |||||||||||| |||||||| ||||| ||||||| ||||||||||  |||||||||||||| ||||||| |||||||||| |||||           
T  8096792 agaaattccaacttctctctaaactttttttcttcttcgtttattgaggaggattggttttaggtcat-ttttgacctagaatcacccctctatttcttt 8096694  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
       ||| ||||||||||||||||||||||||||||||||| ||||    
T  8096693 tttccc-ttttctttcaatctaaataagtggttttcacatatatc 8096650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 11074199 - 11074052
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggag-gggtggttttaggtcattttttgacttagaatcacctctctacan 176  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||| |||||| |||||||||||||| | |||||||| |||||||| | ||||||      
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggtta-tttttgacctagaatcatcactctacgt 11074101  T
Q  177 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
            || |||||||| ||||||||||||||| |||||||||||||    
T  11074100 ctttttttcccttttcttttaatctaaataagtggctttcacatctatc 11074052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 24230086 - 24229937
Alignment:
Q  78 gagagaaactccaacttctctataaa-ctttctttctccttcgttcattgaggaggggtggttttaggtc-attttttg-acttagaatcacctctctac 174  Q
    ||||||||||||||||||||| |||| |||||||| | |||||||||| |||||| || ||||||||||  |||||||| || || ||||||| ||||||    
T  24230086 gagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggtttattttttgtacctaaaatcacccctctac 24229987  T
Q  175 annnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |        ||||||||||||||||||||||||||| ||||||||||||||    
T  24229986 atattttt-ccctttttctttcaatctaaataagtgattttcacatctatc 24229937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 11977236 - 11977089
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag-gtcattttttgacttagaatcacctctctacan 176  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||  |  |||||| || ||||||||   ||| |||     
T  11977236 gagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttagatttttttttttacctagaatcaaacctcgacat 11977137  T
Q  177 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
           ||| ||||||||||||||||||||||||||||||||| ||||    
T  11977136 cttttttccc-ttttctttcaatctaaataagtggttttcacatatatc 11977089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 6216676 - 6216835
Alignment:
Q  71 ttttagagagagaaactccaa-cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    |||||| ||||||||||| || ||||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||||| |||||| || ||||| |      
T  6216676 ttttagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatcca 6216775  T
Q  170 tctacannnnnnnnccctt----tttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||| |    |||||||||||||||||||||||||||||||| ||||    
T  6216776 tctacatttgttttcccctttgctttctttcaatctaaataagtggttttcacatatatc 6216835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 13421733 - 13421869
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| |||||||||||||| |||| |||| |||| | |  || ||||||||||||||||||| |||||||||| |||||||      
T  13421733 gagagaaacttcaacttctctttaaactttctttcttcttcattca-tgagtatgaatgattttaggtcattttttgacatagaatcacc-ctctacatc 13421830  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttc 216  Q
          ||| |||||||| ||||||||||||||||||||    
T  13421831 tttttcccccttttcttttaatctaaataagtggttttc 13421869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 35850573 - 35850662
Alignment:
Q  77 agagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||| ||||| |||||| |||||||| |||||| |||||| || ||||||||||||||||||||| ||||||||| ||||||||||    
T  35850573 agagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc-ttttttgacctagaatcacc 35850662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 7929988 - 7930073
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||||||||||||| |||||| ||||||||||||||||    |||||  |||||||||| |||||||||| |||||||| ||||||||||    
T  7929988 gagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaatcacc 7930073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 14082655 - 14082581
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||||| |||||||||||| ||||||| |||| ||||||  ||||||||| ||||||||||||||| ||||||||    
T  14082655 ttctctctaaactttctttatccttcgctcatcgaggagaagtggttttatgtcattttttgactttgaatcacc 14082581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 4770927 - 4770992
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 143  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||||||| ||||||    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 39567077 - 39567226
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||| ||  ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| |||||||||  |    
T  39567077 tttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacgcc 39567176  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    ||| ||        |||  |||||||||||||||||||||| |||||||||    
T  39567177 tctgcatctttttcccc-ctttctttcaatctaaataagtgattttcacat 39567226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 4771036 - 4771076
Alignment:
Q  185 cctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  4771036 cctttttctttcaatctaaataagtggttttcacatatatc 4771076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 15571275 - 15571422
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt-gacttagaatcacctctctacan 176  Q
    ||||||||||| |||||||||  || ||||||||||||||| ||||| ||||||   |||||||| |||||||||| ||| |||||||| |  || |||     
T  15571275 gagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttttgacctagaatcatccatcaacat 15571374  T
Q  177 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
           | | ||| ||||||||||||||||||||||||||||| ||||    
T  15571375 cttttttctcattt-ctttcaatctaaataagtggttttcacatatatc 15571422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 14211015 - 14211161
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||||   ||||||| |||  |||||| ||| |||  |||| ||||| ||||| |||||||||| |||||||| |||||||||| |    
T  14211015 tttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgagga-gggtgattttaggtcaatttttgacctagaatcacccc 14211113  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    ||| ||        ||   |||||||||||||||||||||| |||||||||    
T  14211114 tctgcatctttttccc---tttctttcaatctaaataagtgattttcacat 14211161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 8985244 - 8985169
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 145  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || || |||||||||| ||||||||    
T  8985244 tttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggt 8985169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 10722604 - 10722705
Alignment:
Q  120 ttcattgaggaggggtggttttaggtca-ttttttgacttagaatca-cctctctacannnnnnnnccctttttctttcaatctaaataagtggttttca 217  Q
    ||||| |||||| ||||||||||||||| ||||||||| |||||||| || |||||||         ||| |||||||||||||||||||||| ||||||    
T  10722604 ttcatcgaggagaggtggttttaggtcatttttttgacctagaatcaccccctctacatctttttt-cctctttctttcaatctaaataagtgtttttca 10722702  T
Q  218 cat 220  Q
    |||    
T  10722703 cat 10722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 10232862 - 10233007
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||        
T  10232862 gagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 10232961  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||||||||||| ||||||    
T  10232962 ttttccccttttctttcaatctaaataagtggttttcacgtctatc 10233007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 6954992 - 6954848
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||         
T  6954992 agaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctctacatcttt 6954893  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
       ||| |||||||||||||||||||||||| |||||||||||||    
T  6954892 tttccccttttctttcaatctaaataagtgggtttcacatctatc 6954848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 47895941 - 47896088
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| |||||||      
T  47895941 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctctacatc 47896040  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          | ||||||||||||||||||||||||||||||||||| ||||    
T  47896041 ttttttctctttttctttcaatctaaataagtggttttcacatatatc 47896088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 9998258 - 9998404
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacctctctacannn 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||       
T  9998258 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctctacatct 9998357  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
         ||| ||||||||||||||||||||||||||||||| ||||||    
T  9998358 tttttccccttttctttcaatctaaataagtggttttcacgtctatc 9998404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 21431417 - 21431561
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| |||||||        
T  21431417 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaatcacccctctacatctt 21431515  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  21431516 ttttcccattttctttcaatctaaataagtggttttcacatctatc 21431561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 12050971 - 12050799
Alignment:
Q  54 caatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||| | ||||||||| || |||||||    
T  12050971 caatgattctcttaggtctttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttatttttt 12050872  T
Q  154 gacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    || ||||||||||| |||||||         |||||||||||| |||||| ||||||||||||||||||||||    
T  12050871 gatttagaatcacccctctacatcttctttcccctttttctttaaatctagataagtggttttcacatctatc 12050799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 45568743 - 45568596
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| | |  ||||||      
T  45568743 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaataatccatctacatc 45568644  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| |||||||||||||||||||||| |||||||||||||||    
T  45568643 ttttttccccttttctttcaatctaaataagttgttttcacatctatc 45568596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 10108030 - 10108173
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||||| |||||||        
T  10108030 gagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca--ttttgacctagaatcacccctctacatctt 10108127  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||||||||||| ||||||    
T  10108128 ttttccccttttctttcaatctaaataagtggttttcacgtctatc 10108173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 40487115 - 40487254
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||   ||||||      
T  40487115 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcactcttctacatc 40487214  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcac 218  Q
          ||| |||||||||||||||||||||||||||||||    
T  40487215 tttttcccc-ttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 52923411 - 52923269
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||||| |||||||         
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtca-tttttgacctagaatcacccctctacatcttt 52923313  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
       ||| ||||||||||||||||||||||||||||||||||||||    
T  52923312 tttccc-ttttctttcaatctaaataagtggttttcacatctatc 52923269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 10229266 - 10229413
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt--gacttagaatcacctctctacann 177  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||| |||||||      
T  10229266 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatc 10229365  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||||||||||| ||||||    
T  10229366 ttttttccccttttctttcaatctaaataagtggttttcacgtctatc 10229413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 9797826 - 9797681
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||| |||||||      
T  9797826 gagagaaactccaacttctctctaaactttatttctccttcgttcatt---gagaggtggttttaggtcattttttgacctagaatcacccctctacatc 9797730  T
Q  178 nnnnnnccct-ttttctttcaatctaaataagtggttttcacatctatc 225  Q
            || ||||||||||||||||||||||||||||||||||||||    
T  9797729 ttttttttctcttttctttcaatctaaataagtggttttcacatctatc 9797681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 32701291 - 32701421
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| | |||||||         
T  32701291 agaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccctctacatcttt 32701390  T
Q  181 nnnccctttttctttcaatctaaataagtgg 211  Q
       | | ||||||||||||||||||||||||    
T  32701391 cttctccttttctttcaatctaaataagtgg 32701421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 48651031 - 48650886
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnnn 179  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||||| ||| |||         
T  48651031 agaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatcacccctcgacatcttt 48650932  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||  ||||||||||||||||||||||    
T  48650931 ttttccccttttctttcaatctgtataagtggttttcacatctatc 48650886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 54148793 - 54148925
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 192  Q
    |||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||||||| |||||||        ||  |||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttc 54148892  T
Q  193 tttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||||||||||||    
T  54148893 tttcaatctaaataagtggttttcacatctatc 54148925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 38545625 - 38545712
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 165  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  38545625 gagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatca 38545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 225
Target Start/End: Complemental strand, 21534120 - 21533961
Alignment:
Q  65 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 164  Q
    |||| ||||||| ||||||||||| || |||||| |||||||||||||||||||||| || ||||| |||||||||||||||  |||||||| |||||||    
T  21534120 ttagttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatc 21534023  T
Q  165 acctctctacannnnnnnnccct-ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||| |||||||         ||| ||||||| ||||||||||||||||||||||||||||||    
T  21534022 acccctctacatctttttttcctcttttcttccaatctaaataagtggttttcacatctatc 21533961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 36461728 - 36461583
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    |||||||| ||  |||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | ||||| |||||||        
T  36461728 gagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgacctatattcacccctctacatctt 36461629  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||| ||||||||||||||    
T  36461628 ttttccccttttctttcaatctaaataagtgattttcacatctatc 36461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 40556503 - 40556648
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||        
T  40556503 gagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctccacatctt 40556602  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
         || ||||||||  || ||||||||||||||||| |||||||    
T  40556603 tttttcccttttcttttgatataaataagtggttttcatatctatc 40556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 33579658 - 33579805
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||| || || ||||||||||| ||||||||||||| |||||||||| |||||||      
T  33579658 gagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctctacatc 33579757  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatct 226  Q
           || ||||||||||||||||||||||| ||||||||| |||||    
T  33579758 tttttt-ccattttctttcaatctaaataagtgattttcacatatatct 33579805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 47042348 - 47042204
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    |||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||||||         
T  47042348 agaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccctctacatcttt 47042249  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        || |||||||||||| |||||||||| ||||||||| ||||    
T  47042248 ttttcccttttctttcaatttaaataagtgattttcacatatatc 47042204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 7449200 - 7449054
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||  | |||||||      
T  7449200 gagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatc 7449102  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  ||||||||||||||||||||||||||||| ||||||||    
T  7449101 ttttttcctcttttctttcaatctaaataagtggttttcgcatctatc 7449054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 7457342 - 7457196
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||  | |||||||      
T  7457342 gagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatc 7457244  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  ||||||||||||||||||||||||||||| ||||||||    
T  7457243 ttttttcctcttttctttcaatctaaataagtggttttcgcatctatc 7457196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 43488904 - 43488742
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattg--------aggaggggtggttttaggtcattttttgacttaga 161  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| |        ||| ||||||| |||||||| ||||||||| ||||    
T  43488904 tttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-ttttttgacctaga 43488806  T
Q  162 atcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  43488805 atcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatc 43488742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 35865232 - 35865086
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||  || ||||| |  ||||||      
T  35865232 gagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcat-ttttgatctaaaatcatccttctacatc 35865134  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  |||||||||||||||||||||| |||||||||| ||||    
T  35865133 ttttttcctcttttctttcaatctaaataagtagttttcacatatatc 35865086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 26276092 - 26275950
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||| || |||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||| || ||||| | ||| |||      
T  26276092 gagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatcaaccctcgaca-t 26275994  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatc 221  Q
          ||| |||||||||||| |||||||||||||||||||||    
T  26275993 tttttacccattttctttcaatttaaataagtggttttcacatc 26275950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 12150089 - 12149984
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||||| || ||||||| |    
T  12150089 tttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccc 12149990  T
Q  170 tctaca 175  Q
    ||||||    
T  12149989 tctaca 12149984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 43016645 - 43016736
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca--ttttttgacttagaatcacc 167  Q
    ||||||||||| ||||||||| |||| |||||||||| ||||||||| ||||| ||||||||||||||||  | ||||||| ||||||||||    
T  43016645 gagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctagaatcacc 43016736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 31272106 - 31272018
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggg-gtggttttaggtcattttttgacttagaatca 165  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||||| |||||||| ||| |||||||| ||||||| || ||||||||    
T  31272106 gagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaatca 31272018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 50194590 - 50194436
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || | ||| ||| |||||||||| |||||||||||| || |||||||||    
T  50194590 tttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatcacctc 50194491  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||| ||        ||| || |||||||||||||||||||| ||| ||||| ||||    
T  50194490 tctgcatcctttttccc-ttctctttcaatctaaataagtgatttccacatatatc 50194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 37040570 - 37040703
Alignment:
Q  76 gagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    |||| |||||||| ||||||| | ||||||||||||||| |||||||||  |||||||||||           |||||||| |||||||||| |||||||    
T  37040570 gagaaagaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtgg-----------tttttgacctagaatcacccctctaca 37040658  T
Q  176 nnnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
            ||| |||||||||||||||||||||||||||||||||    
T  37040659 tcttttttcccattttctttcaatctaaataagtggttttcacat 37040703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 629213 - 629118
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 165  Q
    ||||||| ||||||||||| ||||||||| |||  |||| ||| | |||  |||| |||||||||||||||||||||||| |||||| || |||||    
T  629213 tttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatca 629118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 953706 - 953631
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||||  |||||| |||  |||||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  953706 gagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttt 953631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 36910954 - 36910879
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||||||||||||||||||||| |||||  | ||||||| |||||| ||| ||||| |||| ||||||    
T  36910954 gagagaaactccaacttctctataaactttttttcttttccgttcatcgaggagaggtcgttttgggtcttttttt 36910879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 36910830 - 36910793
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36910830 ttttctttcaatctaaataagtggttttcacatctatc 36910793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 53808169 - 53808096
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 143  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||| |||| ||||||||||| ||||||    
T  53808169 tttttagtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttag 53808096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 46220471 - 46220543
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgagga-ggggtggttttaggtcattttt 152  Q
    |||||||  ||||||||| ||||||||||||||| ||  || |||||||| ||||||||||||||||||||||    
T  46220471 agaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcattttt 46220543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 14859279 - 14859362
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||  |||  | |||||||||||||| ||||||||||||||||    
T  14859279 tttttagcgagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttttt 14859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 20465265 - 20465173
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||||||| |||||||  | |||| |||||||||||||| |||||  || ||||||||||||| |||| |||||||| |||||||||| ||||    
T  20465265 gagagaaacttcaacttccttttaaa-tttctttctccttcattcatcaagtaggggtggttttatgtca-tttttgacatagaatcacccctct 20465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 21290126 - 21290024
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||||||||   ||||||| |||  |||||| ||| |||  |||| |||||| |||| |||||||||| |||||||| |||||||||| |    
T  21290126 tttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcacccc 21290027  T
Q  170 tct 172  Q
    |||    
T  21290026 tct 21290024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 4821624 - 4821685
Alignment:
Q  105 tttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    |||||||||| ||| ||| | ||| ||||||||||||||||||||||||||| || ||||||    
T  4821624 tttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcac 4821685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 1649320 - 1649356
Alignment:
Q  189 tttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||||||||||| ||||    
T  1649320 tttctttcaatctaaataagtggttttcacatatatc 1649356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 29921834 - 29921989
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtgg-ttttaggtcattttttgacttagaatcacct 168  Q
    |||||||  ||||| |||| | ||||||| |||  |||||||||| ||| ||| | |||||||||||| ||||||||||||||||||  || |||||| |    
T  29921834 tttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcactt 29921933  T
Q  169 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||| ||        |||  |||||||||||||||||||||| ||| ||||| ||||    
T  29921934 ctctccatcttttttccc-ctttctttcaatctaaataagtgatttccacatatatc 29921989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 29970987 - 29971142
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtgg-ttttaggtcattttttgacttagaatcacct 168  Q
    |||||||  ||||| |||| | ||||||| |||  |||||||||| ||| ||| | |||||||||||| ||||||||||||||||||  || |||||| |    
T  29970987 tttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcactt 29971086  T
Q  169 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||| ||        |||  |||||||||||||||||||||| ||| ||||| ||||    
T  29971087 ctctccatcttttttccc-ctttctttcaatctaaataagtgatttccacatatatc 29971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 9319845 - 9319993
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||| ||||||||| |||| ||||     ||||||||||| ||||||| |||||||||| | |||||| ||| || ||||||| |    
T  9319845 tttttagtgggagaaactctaacttctctctaaattttc-----ccttcgttcatcgaggaggagtggttttagattattttt-gacatataatcacc-c 9319937  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||         ||  ||| |||||||| ||||||||||||||||||||||||    
T  9319938 tctacatctttttttcccctttttttcaatcaaaataagtggttttcacatctatc 9319993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 20609170 - 20609099
Alignment:
Q  104 ctttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    ||||||||||||||| ||| | ||||||||||| ||||| || |||||||||| || ||||| | |||||||    
T  20609170 ctttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctctaca 20609099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 23800195 - 23800061
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggagggg--tggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttt 190  Q
    |||||| |||| ||| |||||||||| ||||| || ||||||  ||||||||||| |||||||||| || ||| ||   ||||||        ||  |||    
T  23800195 ttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaattactcttctacatcttttttcctcttt 23800096  T
Q  191 tctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||||||||| |||| ||||    
T  23800095 tctttcaatctaaataagtggtttttacatatatc 23800061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 29249025 - 29249128
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttt-taggtcattttttgacttagaatcacct 168  Q
    ||||||| ||||||||||| ||||||||| |||  ||||||||||||||  |||| ||| || | || |||  |||||| |||||||| ||||||||| |    
T  29249025 tttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcactt 29249124  T
Q  169 ctct 172  Q
    ||||    
T  29249125 ctct 29249128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 38860310 - 38860271
Alignment:
Q  186 ctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  38860310 ctttttctttcaattcaaataagtggttttcacatctatc 38860271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 7546400 - 7546494
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||||| || | ||||||| |||  ||||||||||  ||  |||| ||||||||||| |||||||||| |||||||  |||||||||| ||||    
T  7546400 gagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctct 7546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 20988062 - 20988020
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttc 112  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  20988062 tttttagtgagagaaactccaacttctctctaaacttcctttc 20988020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 20609079 - 20609042
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  20609079 ttttctttcaatctaaataagtggttttaacatatatc 20609042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 51486939 - 51486987
Alignment:
Q  125 tgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 173  Q
    |||||||||||| |||||||||| |||||||| |||| ||| |||||||    
T  51486939 tgaggaggggtgattttaggtcaatttttgacgtagagtcatctctcta 51486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 53508117 - 53508157
Alignment:
Q  185 cctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||| |||||||||| ||||||||| ||||    
T  53508117 cctttttctttcaatataaataagtgattttcacatatatc 53508157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 4778545 - 4778700
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  4778545 tttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 4778644  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||         || |||||||||||| |||||||||||||||||||||||||    
T  4778645 tctacatctttttttcccttttctttcaatttaaataagtggttttcacatctatc 4778700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 7646274 - 7646418
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnn 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||        
T  7646274 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 7646373  T
Q  179 nnnnnccctttttctttcaatctaaataagtggttttcacatcta 223  Q
         ||| ||||||||| ||||||||||||||||||||||||||    
T  7646374 tttttccccttttctttcgatctaaataagtggttttcacatcta 7646418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 7448050 - 7448194
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||||        
T  7448050 gagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctctacatctt 7448149  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| |||||||||||||||||||| |||||||||||||||||    
T  7448150 tttcccc-ttttctttcaatctaaataaatggttttcacatctatc 7448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 43397418 - 43397273
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||      
T  43397418 gagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacctctctacatc 43397319  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  ||||||||||||||||||||||||||||||||| ||||    
T  43397318 tttttccc--ttttctttcaatctaaataagtggttttcacatatatc 43397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 4098895 - 4099050
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||| ||| ||||| ||||| |||||| |||||||||||||||||| ||||||||||      
T  4098895 tttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcaccca 4098994  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  4098995 tctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatc 4099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 31788256 - 31788403
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||      
T  31788256 gagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctctacatc 31788355  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||| ||||||||||||||    
T  31788356 ttttttcccattttctttcaatctaaataagtgattttcacatctatc 31788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 36943423 - 36943276
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||||||| || ||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  36943423 gagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatc 36943324  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  |||||||||||||||||||||| |||||||||||||||    
T  36943323 ttttttcctcttttctttcaatctaaataagtagttttcacatctatc 36943276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 225
Target Start/End: Complemental strand, 5428188 - 5428020
Alignment:
Q  57 tgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 156  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  5428188 tgattctcttaggtctttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgac 5428089  T
Q  157 ttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
     |||| ||| |  ||||||         ||||||||||||||||||||||||||  ||||||||||||||    
T  5428088 ctagagtcatcgttctacatcttttttcccctttttctttcaatctaaataagt-tttttcacatctatc 5428020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 9169554 - 9169410
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||| |||||||||| |||||||        
T  9169554 gagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctacatttt 9169456  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
         || ||||||||||||||||||||||||||||||||||||||    
T  9169455 tttttcccttttctttcaatctaaataagtggttttcacatctatc 9169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 37876899 - 37876750
Alignment:
Q  76 gagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||  | ||||    
T  37876899 gagagggaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtaca 37876800  T
Q  176 nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
            |||||||||||| |||||||||||||||||||||||||||||    
T  37876799 tctttttcccctttttcttttaatctaaataagtggttttcacatctatc 37876750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 1421456 - 1421622
Alignment:
Q  63 tcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttaga 161  Q
    |||||| ||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||    
T  1421456 tcttagttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatataga 1421555  T
Q  162 atcacctctctaca---nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||| |||||||           ||| ||||||||||||||||||||||||||||||||||||||    
T  1421556 atcacccctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacatctatc 1421622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 18763268 - 18763409
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||| ||||| | ||| |||||| |||||||||| ||||||||||||| |||||||||| |||||||      
T  18763268 gagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctacatc 18763367  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
          ||| |||||||||||||||||||||||||||||||||    
T  18763368 ttttttccc-ttttctttcaatctaaataagtggttttcacat 18763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 7678177 - 7678080
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  7678177 gagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctctaca 7678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 27097701 - 27097615
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  27097701 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcacc 27097615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 12677595 - 12677498
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |||| ||||||||||||||| |||||||||| |||||||    
T  12677595 gagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcacccctctaca 12677498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 38444982 - 38445113
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 192  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||  |||||||||| |||||||        |||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctacatcttttttccctttttc 38445080  T
Q  193 tttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||| |||||||||||||||||||||||||    
T  38445081 tttcaatataaataagtggttttcacatctatc 38445113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 11985529 - 11985383
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||| | |||||| |||||||||| |||||||||| || |||||||||| |||||||      
T  11985529 gagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctctacaac 11985430  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| |||||||||||| |||||||||||||||||||| ||||    
T  11985429 tttttcccc-ttttctttcaatttaaataagtggttttcacatatatc 11985383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 4904443 - 4904298
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    |||||||  ||||||||| |||||||||| ||||||||||||||| |||||| ||||| ||| |||||||||| ||||||||||||| || ||||||| |    
T  4904443 tttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcaccac 4904344  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    | ||||          |||||| |||||||||||||||||||||||||||| ||||    
T  4904343 tttacat---------cttttt-tttcaatctaaataagtggttttcacatatatc 4904298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 12648223 - 12648077
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| |||  |||||||||| ||   || ||||||||||||||||||||||||||||||||| |||||||||| ||| |||      
T  12648223 gagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaatcacccctccacatc 12648124  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          | | ||||||||||||||||||||||| ||| ||||| ||||    
T  12648123 ttttttctc-ttttctttcaatctaaataagtgatttccacatatatc 12648077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 31129060 - 31128974
Alignment:
Q  65 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 151  Q
    |||| ||||||| |||| ||||| |||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  31129060 ttagttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 35220131 - 35220222
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  35220131 gagagaaactccaacctctctctaaactttctttctccttcattcat---cgaggggtggttttaggttattttttgacctagaatcacccctct 35220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 17995012 - 17994874
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 180  Q
    ||||||| || ||||||| ||||||||||||||| |||| || | || ||| |||||||||||||||||||||| | || |||||||||||| ||         
T  17995012 agaaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaatcacctctctgcatcttt 17994913  T
Q  181 nnnccctttttctttcaatctaaataagtggttttcaca 219  Q
       ||  |||||||||||||| |||||||||||||||||    
T  17994912 tttcctattttctttcaatcttaataagtggttttcaca 17994874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 18108034 - 18107943
Alignment:
Q  79 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 170  Q
    ||||||| ||||  |||||| |||  |||||||||| ||| |||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  18108034 agagaaagtccactttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctct 18107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 19062609 - 19062505
Alignment:
Q  119 gttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcac 218  Q
    |||||| |||||||| ||||||||||| |||||||||  |||||||||| |||||||        ||||||| |||||||||||||||||||||||||||    
T  19062609 gttcatcgaggaggg-tggttttaggttattttttgaactagaatcacccctctacatcctttttccctttt-ctttcaatctaaataagtggttttcac 19062512  T
Q  219 atctatc 225  Q
    |||||||    
T  19062511 atctatc 19062505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 24461243 - 24461327
Alignment:
Q  82 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    ||||||||||||||||| |||  |||  ||||| |||  ||||| |||||||||||||||||||||||||||||| |||||||||    
T  24461243 gaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcac 24461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 29279869 - 29279723
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||||||||||||| ||| |||||||||| |||| ||||| ||||| | | | |||||||||||||||||  | | |||| |  |||||||      
T  29279869 gagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttttgggtaaaaatcgctcctctacatc 29279771  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||  ||||||||||||||||||||||||||||||||| ||||    
T  29279770 ttttttcctcttttctttcaatctaaataagtggttttcacatatatc 29279723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 32448928 - 32448826
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||| ||||||||| |||| |||  || || |||  |||| |||||||||||||||||||||||| |||||| || ||||||| |    
T  32448928 tttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcacccc 32448829  T
Q  170 tct 172  Q
    |||    
T  32448828 tct 32448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 8809084 - 8809223
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||| ||||||||| ||||||||||||||||||| | | | |||||  ||||||||||| ||| |||||||| || ||||||| |||||||        
T  8809084 gagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatca-tttttgacctaaaatcacccctctacatctt 8809182  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
        ||  ||||||||||||| |||||||||| || |||||    
T  8809183 ttttcctcttttctttcaatcaaaataagtggcttgcacat 8809223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 36691666 - 36691732
Alignment:
Q  78 gagagaaactccaactt-ctctataaactttctttctccttcgttcattgaggaggggtggttttag 143  Q
    ||||||||||||||||| || | ||||| ||||||||||||| || |||||||||||||||||||||    
T  36691666 gagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 4041783 - 4041747
Alignment:
Q  189 tttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||||||||||||||||||||||||||||||||||    
T  4041783 tttctttcaatctaaataagtggttttcacatctatc 4041747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 7678061 - 7678025
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctat 224  Q
    |||||||||||||||||||||||||||||||||||||    
T  7678061 ttttctttcaatctaaataagtggttttcacatctat 7678025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 42698982 - 42698922
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgagga 130  Q
    ||||||| |||||||||| |||||||| | ||||||||||||||||||  |||||||||||    
T  42698982 tttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcattgagga 42698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 29574938 - 29574843
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| ||||||||||| ||||||| ||  |  ||| |||||| |||  || | |||||||||||||||||| |||||||||||| ||||||||||    
T  29574938 tttttagtgagagaaactctaacttcttta--agttttatttctctttcactcgtcgaggaggggtggttttagatcattttttgacctagaatcacc 29574843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 31128969 - 31128932
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31128969 ttttctttcaatctaaataagtggttttcacatatatc 31128932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 37994084 - 37994168
Alignment:
Q  87 tccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||||||||| ||   |||||||||| |||  |||| ||||| |||||||||||||||| |||||||| |||||||||| ||||    
T  37994084 tccaacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtca-tttttgacctagaatcacccctct 37994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 37416488 - 37416576
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 152  Q
    ||||| ||||||  |||||||||| |||||||||| |||| ||| ||| || ||| ||| | || |||||||| |||||||||||||||    
T  37416488 cttagttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt 37416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 41694406 - 41694502
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 165  Q
    ||||||||  ||||||||| || ||||||| ||| |||||| ||||||||  |||| ||| ||  || ||||||||||||||||||| ||| |||||    
T  41694406 gtttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgatttaaaatca 41694502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 4042276 - 4042229
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcatt 125  Q
    ||||||||||||||||||||| |||||||| |||||| ||| ||||||    
T  4042276 gagagaaactccaacttctctctaaactttttttctcattccttcatt 4042229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 6436459 - 6436502
Alignment:
Q  129 gaggggtggttttaggtcattttttgacttagaatcacctctct 172  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||    
T  6436459 gaggggtgattttaggtcattttttgacatagaatcacccctct 6436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 25509342 - 25509291
Alignment:
Q  102 aactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||| |||||||||| |||||  |||||||||||||| ||||||    
T  25509342 aactttctttcttcttcgttcatcgaggaatggtggttttaggtcttttttt 25509291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 28718245 - 28718160
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 165  Q
    |||||||||||||||| |||| |||  ||||||| || ||   |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  28718245 gagagaaactccaact-ctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcat-ttttgacatagaatca 28718160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 39311145 - 39311059
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||| |||||  || ||| |||||||||| |||| ||||| ||| | || || ||||||||||||||||||| ||||||||||    
T  39311145 gagaaactcgaactttgctctaagctttctttcttcttcattcatcgagaatgg-tgattttaggtcattttttgacctagaatcacc 39311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 11833394 - 11833432
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatct 226  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  11833394 ttttctttcaatttaaataagtggttttcacatatatct 11833432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 28872074 - 28871987
Alignment:
Q  64 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    ||||| ||||||| |||||||||||||  |||||| |||  ||| |||||| ||| ||||| ||||| | ||||||||||||| ||||||    
T  28872074 cttagttttttagtgagagaaactccacattctctctaa--tttttttctcattcattcatcgaggatgagtggttttaggtcttttttt 28871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 3308787 - 3308828
Alignment:
Q  126 gaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  3308787 gaggaggggtgattttaggtcaatttttgacctagaatcacc 3308828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 8809003 - 8809036
Alignment:
Q  78 gagagaaactccaacttctctataaactttcttt 111  Q
    ||||||||||||||||||||| ||||||||||||    
T  8809003 gagagaaactccaacttctctctaaactttcttt 8809036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 11833338 - 11833371
Alignment:
Q  132 gggtggttttaggtcattttttgacttagaatca 165  Q
    |||||||||||||||||||||||||||| |||||    
T  11833338 gggtggttttaggtcattttttgacttaaaatca 11833371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 13120022 - 13120083
Alignment:
Q  92 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||||||||||||| ||||||| |||| ||||| || || |||||||||||| || ||||||    
T  13120022 cttctctataaactctctttcttcttcattcatcgaagaagggtggttttagatcttttttt 13120083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 20146011 - 20145914
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 167  Q
    ||||||| |||||||||| ||  |||||| |||  | ||||||| ||||  ||||  ||||||||  |||||||||||||| ||||| ||||||||||    
T  20146011 tttttagtgagagaaacttcacattctctttaagttatctttcttcttcactcatcaaggaggggcagttttaggtcatttattgacatagaatcacc 20145914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 30400307 - 30400250
Alignment:
Q  109 tttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    |||||||||| ||||| ||| || ||||||||||| |||||||||||| || ||||||    
T  30400307 tttctccttcattcatcgagaagaggtggttttagatcattttttgacctaaaatcac 30400250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 36691781 - 36691810
Alignment:
Q  185 cctttttctttcaatctaaataagtggttt 214  Q
    ||||||||||||||||||||||||||||||    
T  36691781 cctttttctttcaatctaaataagtggttt 36691810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 29173909 - 29173877
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacat 220  Q
    ||||||||||||| |||||||||||||||||||    
T  29173909 ttttctttcaatccaaataagtggttttcacat 29173877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 50578 - 50723
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| | |||||||        
T  50578 gagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctctacatctt 50677  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  50678 ttttccccttttctttcaatctaaataagtggttttcacatctatc 50723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 33047 - 32900
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||| |||||||||| |||||||      
T  33047 gagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctctacatc 32948  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
          ||| ||||||||||||||||||||||||||||||||||||||    
T  32947 ttttgtccccttttctttcaatctaaataagtggttttcacatctatc 32900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 72161 - 72016
Alignment:
Q  80 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 179  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||| ||        
T  72161 gagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccattcttcatctt 72062  T
Q  180 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
        ||| ||||||||||||| ||||||||||||||||||||||||    
T  72061 tttcccccttttctttcaatccaaataagtggttttcacatctatc 72016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 15282 - 15425
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  15282 gagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 15381  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttcacatct 222  Q
          ||| |||||||||||||||||||||||||||||| ||||    
T  15382 tttttcccc-ttttctttcaatctaaataagtggttttcatatct 15425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 1126 - 1280
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||| |||||| |||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  1126 tttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccc 1225  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    |||||         ||| |||||||||| |||||||||||||||||||||| ||||    
T  1226 tctacttcttttttccc-ttttctttcactctaaataagtggttttcacatatatc 1280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 15137 - 14998
Alignment:
Q  78 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 177  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||| | ||||  |||||| |||||||||| |||||||||| |||||||      
T  15137 gagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactctacatc 15038  T
Q  178 nnnnnnccctttttctttcaatctaaataagtggttttca 217  Q
          |||||||||||||||||||||||||| |||||||    
T  15037 ttttttccctttttctttcaatctaaataagtcgttttca 14998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 8296 - 8401
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||||| || ||||||| |    
T  8296 tttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccc 8395  T
Q  170 tctaca 175  Q
    ||||||    
T  8396 tctaca 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 58386 - 58232
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 169  Q
    ||||||| ||||||||||||||||||||| |||  |||| || || |||  || | ||||||||||||||||||||||||||||||| || ||||||| |    
T  58386 tttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccc 58287  T
Q  170 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||| ||         || ||||||||||||||||||||||| ||| ||||| ||||    
T  58286 tctgcatccttttttcc-ttttctttcaatctaaataagtgatttccacatatatc 58232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 25597 - 25531
Alignment:
Q  109 tttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 175  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||| |||||||    
T  25597 tttctccttcgttcatcgaggaggggtggttttatgtcattttttgacctataatcacccctctaca 25531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 225
Target Start/End: Original strand, 7499 - 7652
Alignment:
Q  69 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacct 168  Q
    |||||||| ||| ||||||||  ||||||| |||  |||||||||||||  ||||| |||||||| |||||||||||||||||||||| |||||||||      
T  7499 gtttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactc 7597  T
Q  169 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
     ||| ||        ||||||  |||||||| |||||||||||||||||||| ||||    
T  7598 atctgcatcttttaccccttt--ctttcaatttaaataagtggttttcacatatatc 7652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 10672 - 10742
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 151  Q
    |||||||| ||||||||| ||||||| ||| ||||||| ||||| |||||| |||||||||||||||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtcatttt 10742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 2121 - 2041
Alignment:
Q  73 ttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 153  Q
    |||| ||||||||||||||||||| |  ||||||||||||| |||| ||||||||||||  ||| ||||||||| ||||||    
T  2121 ttagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtcttttttt 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 25124 - 25209
Alignment:
Q  79 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 166  Q
    ||||||||| |||||| ||| ||||||||||||||| ||| ||||| |  |||||||||||||| |||| ||||||||||| ||||||    
T  25124 agagaaacttcaacttttctctaaactttctttctctttcattcatcg--gaggggtggttttaagtcactttttgacttaaaatcac 25209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 12721 - 12847
Alignment:
Q  93 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 192  Q
    |||||| | ||||||||||||| ||  |||||  ||||| |||||||||||||||||||||||| |||||||||| || ||||         || |||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctcc-ttttc 12819  T
Q  193 tttcaatctaaataagtggttttcacat 220  Q
    | ||||| ||||||||||||||||||||    
T  12820 tatcaatttaaataagtggttttcacat 12847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 31565 - 31422
Alignment:
Q  83 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctacannnnnn 181  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||| ||| ||| ||||| |||||| |||| ||  | ||||||  |||||||          
T  31565 aaactccaacttttctttaaactttctttctccttcgttcatcgagcaggagtgattttatgtcattgtttttaccaaaaatcactcctctacatctttt 31466  T
Q  182 nnccctttttctttcaatctaaataagtggttttcacatctatc 225  Q
      ||  |||||||||||| ||||||||| |||||||||| ||||    
T  31465 ttcctcttttctttcaatataaataagtagttttcacatatatc 31422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 19342 - 19261
Alignment:
Q  70 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 152  Q
    ||||||| ||||||||||||||||||||| | || |||||||||| |||  |||| ||||||||||||||||| ||| |||||    
T  19342 tttttagtgagagaaactccaacttctctct-aattttctttctctttcactcatcgaggaggggtggttttatgtcgttttt 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 1925 - 1832
Alignment:
Q  126 gaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 220  Q
    ||||||||||| | |||||||| |||||||| ||||||||||||||| ||        |||  |||||||||||||||||||||| |||||||||    
T  1925 gaggaggggtgatattaggtcaatttttgacctagaatcacctctctgcatcttttttccc-ctttctttcaatctaaataagtgattttcacat 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 71549 - 71437
Alignment:
Q  110 ttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagt 209  Q
    ||||||||| ||||  ||| ||||||||||||||||||||||| ||| || ||||||| |||||||        ||  ||||||||||||||||| ||||    
T  71549 ttctccttcattcacagagaaggggtggttttaggtcattttt-gacctaaaatcacccctctacatatttt--cctcttttctttcaatctaaacaagt 71453  T
Q  210 ggttttcacatctatc 225  Q
    ||||||||||| ||||    
T  71452 ggttttcacatatatc 71437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 10333 - 10264
Alignment:
Q  81 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 152  Q
    |||||||  ||||||||| |||||||| |||||||||||||||||||||| || || ||||| |||||||||    
T  10333 agaaactttaacttctct-taaacttt-tttctccttcgttcattgaggatggatgattttatgtcattttt 10264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Original strand, 37947 - 37978
Alignment:
Q  189 tttctttcaatctaaataagtggttttcacat 220  Q
    ||||||||||||||||||||||||||||||||    
T  37947 tttctttcaatctaaataagtggttttcacat 37978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 10230 - 10193
Alignment:
Q  188 ttttctttcaatctaaataagtggttttcacatctatc 225  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  10230 ttttctttccatctaaataagtggttttcacatatatc 10193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 92939 - 92977
Alignment:
Q  127 aggaggggtggttttaggtcattttttgacttagaatca 165  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  92939 aggaggggtggttttaggttattttttgacctagaatca 92977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University