View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5832_high_16 (Length: 216)

Name: NF5832_high_16
Description: NF5832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5832_high_16
NF5832_high_16
[»] chr4 (48 HSPs)
chr4 (14-198)||(22558616-22558801)
chr4 (38-198)||(2520574-2520734)
chr4 (43-198)||(4142907-4143061)
chr4 (43-198)||(26633823-26633977)
chr4 (43-198)||(22610986-22611140)
chr4 (53-198)||(19853664-19853808)
chr4 (53-198)||(53810840-53810985)
chr4 (51-198)||(13633924-13634072)
chr4 (54-192)||(35348119-35348256)
chr4 (51-198)||(21686393-21686539)
chr4 (52-198)||(43510010-43510156)
chr4 (51-192)||(10496152-10496292)
chr4 (54-198)||(32766326-32766471)
chr4 (51-193)||(9165199-9165342)
chr4 (43-198)||(54021663-54021818)
chr4 (43-193)||(26091071-26091220)
chr4 (66-198)||(24099222-24099355)
chr4 (51-140)||(48257659-48257748)
chr4 (81-198)||(56040796-56040915)
chr4 (51-193)||(9178167-9178309)
chr4 (42-148)||(53443927-53444032)
chr4 (62-198)||(5119159-5119296)
chr4 (43-140)||(22300647-22300744)
chr4 (51-140)||(29961139-29961228)
chr4 (43-139)||(47320612-47320708)
chr4 (51-121)||(56156782-56156852)
chr4 (37-126)||(33920848-33920937)
chr4 (51-145)||(51888421-51888515)
chr4 (43-139)||(9643179-9643276)
chr4 (42-140)||(18935588-18935686)
chr4 (56-126)||(43126694-43126764)
chr4 (51-97)||(51024714-51024760)
chr4 (51-198)||(45418339-45418483)
chr4 (56-148)||(10259097-10259188)
chr4 (74-126)||(40066265-40066317)
chr4 (43-129)||(21662287-21662372)
chr4 (43-129)||(21671051-21671136)
chr4 (94-140)||(36161567-36161613)
chr4 (161-198)||(43095550-43095587)
chr4 (78-125)||(43095471-43095518)
chr4 (43-193)||(27651750-27651899)
chr4 (73-139)||(29121889-29121954)
chr4 (43-145)||(36204586-36204687)
chr4 (107-136)||(13863164-13863193)
chr4 (162-198)||(22038953-22038989)
chr4 (166-198)||(29120515-29120547)
chr4 (161-193)||(40066212-40066244)
chr4 (161-193)||(52944231-52944263)
[»] chr1 (42 HSPs)
chr1 (27-198)||(29738788-29738959)
chr1 (37-198)||(45415338-45415499)
chr1 (28-198)||(5983606-5983777)
chr1 (35-198)||(11462599-11462763)
chr1 (43-198)||(31983965-31984120)
chr1 (54-198)||(7337815-7337959)
chr1 (51-192)||(34878430-34878570)
chr1 (37-198)||(35462189-35462351)
chr1 (77-198)||(32394818-32394938)
chr1 (51-129)||(35484599-35484677)
chr1 (37-198)||(1742060-1742220)
chr1 (43-140)||(10776670-10776767)
chr1 (37-188)||(14872418-14872570)
chr1 (53-123)||(41176977-41177047)
chr1 (43-190)||(51916812-51916959)
chr1 (51-193)||(15435030-15435171)
chr1 (57-140)||(7836976-7837059)
chr1 (45-145)||(18939109-18939209)
chr1 (37-198)||(21947770-21947930)
chr1 (73-198)||(23291795-23291922)
chr1 (37-193)||(45789344-45789498)
chr1 (43-191)||(21686658-21686804)
chr1 (62-189)||(44915449-44915577)
chr1 (39-122)||(4413085-4413168)
chr1 (53-198)||(36894394-36894535)
chr1 (56-140)||(3228068-3228152)
chr1 (37-193)||(26535179-26535329)
chr1 (43-138)||(32679311-32679406)
chr1 (51-145)||(49626703-49626797)
chr1 (65-198)||(8212062-8212195)
chr1 (66-193)||(15836001-15836127)
chr1 (43-189)||(27456325-27456472)
chr1 (78-193)||(50377148-50377260)
chr1 (104-141)||(9341571-9341608)
chr1 (161-198)||(35484543-35484580)
chr1 (43-138)||(44543058-44543153)
chr1 (66-145)||(16161640-16161719)
chr1 (43-140)||(12634952-12635049)
chr1 (57-142)||(31317550-31317635)
chr1 (161-198)||(31918892-31918929)
chr1 (161-193)||(10776615-10776647)
chr1 (162-190)||(13144972-13145000)
[»] chr7 (36 HSPs)
chr7 (25-198)||(48061188-48061362)
chr7 (33-198)||(12141459-12141625)
chr7 (51-193)||(37837616-37837757)
chr7 (51-199)||(9450288-9450436)
chr7 (43-198)||(30756971-30757126)
chr7 (51-193)||(42978400-42978543)
chr7 (43-193)||(19404912-19405061)
chr7 (43-198)||(34899759-34899911)
chr7 (54-198)||(48316964-48317108)
chr7 (43-148)||(8013667-8013772)
chr7 (51-198)||(39171743-39171891)
chr7 (43-198)||(47590098-47590250)
chr7 (51-198)||(13797084-13797230)
chr7 (43-178)||(19296662-19296797)
chr7 (59-198)||(24770055-24770193)
chr7 (53-198)||(40992976-40993121)
chr7 (53-190)||(38798584-38798717)
chr7 (43-145)||(5078598-5078700)
chr7 (51-109)||(45350433-45350491)
chr7 (51-126)||(39329017-39329092)
chr7 (56-126)||(9915941-9916011)
chr7 (56-126)||(9923853-9923923)
chr7 (43-129)||(25287402-25287488)
chr7 (65-193)||(35132757-35132884)
chr7 (51-198)||(4529871-4530018)
chr7 (65-139)||(22087123-22087197)
chr7 (101-191)||(45349962-45350051)
chr7 (43-140)||(24351053-24351150)
chr7 (37-125)||(3224642-3224730)
chr7 (80-140)||(38051276-38051336)
chr7 (65-140)||(1749351-1749426)
chr7 (43-140)||(5348794-5348890)
chr7 (99-140)||(28476063-28476104)
chr7 (43-75)||(24350709-24350741)
chr7 (106-142)||(39228862-39228898)
chr7 (162-198)||(49148244-49148280)
[»] chr8 (38 HSPs)
chr8 (51-199)||(31013720-31013868)
chr8 (29-198)||(23230414-23230583)
chr8 (37-148)||(17693814-17693924)
chr8 (53-186)||(10377491-10377623)
chr8 (51-196)||(37971087-37971229)
chr8 (51-198)||(20559896-20560041)
chr8 (51-198)||(20571458-20571603)
chr8 (43-140)||(25191274-25191371)
chr8 (51-148)||(45446011-45446108)
chr8 (51-190)||(29937907-29938045)
chr8 (51-198)||(7677431-7677577)
chr8 (51-197)||(20553397-20553542)
chr8 (37-198)||(40211455-40211617)
chr8 (44-198)||(7883390-7883544)
chr8 (51-198)||(27110614-27110761)
chr8 (54-193)||(3673241-3673378)
chr8 (51-126)||(8412571-8412646)
chr8 (43-183)||(8980981-8981121)
chr8 (51-138)||(33214840-33214928)
chr8 (51-190)||(28897503-28897642)
chr8 (43-129)||(1236912-1236998)
chr8 (53-198)||(14545052-14545198)
chr8 (42-129)||(15344089-15344176)
chr8 (42-129)||(15433154-15433241)
chr8 (42-129)||(15524458-15524545)
chr8 (51-145)||(1239606-1239700)
chr8 (54-140)||(8443729-8443814)
chr8 (51-118)||(27498565-27498632)
chr8 (43-126)||(36948658-36948742)
chr8 (51-146)||(41684225-41684320)
chr8 (94-140)||(8826043-8826089)
chr8 (43-145)||(24099465-24099565)
chr8 (99-140)||(14916345-14916385)
chr8 (43-140)||(29617665-29617762)
chr8 (161-190)||(36948596-36948625)
chr8 (78-126)||(3240194-3240242)
chr8 (161-193)||(14585601-14585633)
chr8 (162-194)||(41896413-41896445)
[»] scaffold0884 (1 HSPs)
scaffold0884 (25-198)||(2124-2297)
[»] chr6 (25 HSPs)
chr6 (51-198)||(12170286-12170433)
chr6 (53-198)||(33053320-33053465)
chr6 (31-198)||(7515353-7515521)
chr6 (53-198)||(23128411-23128556)
chr6 (53-198)||(605997-606142)
chr6 (51-198)||(3913726-3913872)
chr6 (53-198)||(68153-68297)
chr6 (51-193)||(30894428-30894569)
chr6 (73-198)||(34018373-34018498)
chr6 (59-148)||(29320064-29320153)
chr6 (51-140)||(32328793-32328882)
chr6 (54-126)||(9723602-9723675)
chr6 (51-198)||(32059700-32059845)
chr6 (43-145)||(4010705-4010807)
chr6 (51-189)||(29255603-29255741)
chr6 (51-126)||(9719613-9719691)
chr6 (51-198)||(30608666-30608811)
chr6 (51-97)||(9721763-9721809)
chr6 (51-118)||(127468-127534)
chr6 (43-140)||(30493317-30493413)
chr6 (43-128)||(32191954-32192038)
chr6 (161-198)||(32327369-32327406)
chr6 (161-193)||(11321626-11321658)
chr6 (55-126)||(24227936-24228007)
chr6 (36-126)||(27097834-27097924)
[»] chr5 (27 HSPs)
chr5 (43-198)||(13007010-13007165)
chr5 (43-198)||(6012290-6012445)
chr5 (51-198)||(38597587-38597733)
chr5 (44-198)||(34945204-34945358)
chr5 (53-198)||(9113877-9114022)
chr5 (53-198)||(26825220-26825367)
chr5 (51-193)||(26878236-26878377)
chr5 (51-192)||(38007147-38007286)
chr5 (63-198)||(31391908-31392044)
chr5 (51-198)||(7036017-7036164)
chr5 (55-198)||(25979951-25980094)
chr5 (54-198)||(8096650-8096792)
chr5 (51-198)||(11074052-11074199)
chr5 (51-198)||(24229937-24230086)
chr5 (51-198)||(11977089-11977236)
chr5 (44-198)||(6216676-6216835)
chr5 (51-189)||(13421733-13421869)
chr5 (50-140)||(35850573-35850662)
chr5 (51-140)||(7929988-7930073)
chr5 (66-140)||(14082581-14082655)
chr5 (51-116)||(4770927-4770992)
chr5 (43-193)||(39567077-39567226)
chr5 (158-198)||(4771036-4771076)
chr5 (51-198)||(15571275-15571422)
chr5 (43-193)||(14211015-14211161)
chr5 (43-118)||(8985169-8985244)
chr5 (93-193)||(10722604-10722705)
[»] chr3 (54 HSPs)
chr3 (53-198)||(10232862-10233007)
chr3 (54-198)||(6954848-6954992)
chr3 (51-198)||(47895941-47896088)
chr3 (53-198)||(9998258-9998404)
chr3 (53-198)||(21431417-21431561)
chr3 (27-198)||(12050799-12050971)
chr3 (51-198)||(45568596-45568743)
chr3 (53-198)||(10108030-10108173)
chr3 (51-191)||(40487115-40487254)
chr3 (54-198)||(52923269-52923411)
chr3 (53-198)||(10229266-10229413)
chr3 (51-198)||(9797681-9797826)
chr3 (54-184)||(32701291-32701421)
chr3 (54-198)||(48650886-48651031)
chr3 (66-198)||(54148793-54148925)
chr3 (51-138)||(38545625-38545712)
chr3 (38-198)||(21533961-21534120)
chr3 (53-198)||(36461583-36461728)
chr3 (53-198)||(40556503-40556648)
chr3 (51-199)||(33579658-33579805)
chr3 (54-198)||(47042204-47042348)
chr3 (51-198)||(7449054-7449200)
chr3 (51-198)||(7457196-7457342)
chr3 (43-198)||(43488742-43488904)
chr3 (51-198)||(35865086-35865232)
chr3 (51-194)||(26275950-26276092)
chr3 (43-148)||(12149984-12150089)
chr3 (51-140)||(43016645-43016736)
chr3 (51-138)||(31272018-31272106)
chr3 (43-198)||(50194436-50194590)
chr3 (49-193)||(37040570-37040703)
chr3 (43-138)||(629118-629213)
chr3 (51-126)||(953631-953706)
chr3 (51-126)||(36910879-36910954)
chr3 (161-198)||(36910793-36910830)
chr3 (43-116)||(53808096-53808169)
chr3 (54-125)||(46220471-46220543)
chr3 (43-126)||(14859279-14859362)
chr3 (51-145)||(20465173-20465265)
chr3 (43-145)||(21290024-21290126)
chr3 (78-139)||(4821624-4821685)
chr3 (162-198)||(1649320-1649356)
chr3 (43-198)||(29921834-29921989)
chr3 (43-198)||(29970987-29971142)
chr3 (43-198)||(9319845-9319993)
chr3 (77-148)||(20609099-20609170)
chr3 (66-198)||(23800061-23800195)
chr3 (43-145)||(29249025-29249128)
chr3 (159-198)||(38860271-38860310)
chr3 (51-145)||(7546400-7546494)
chr3 (43-85)||(20988020-20988062)
chr3 (161-198)||(20609042-20609079)
chr3 (98-146)||(51486939-51486987)
chr3 (158-198)||(53508117-53508157)
[»] chr2 (52 HSPs)
chr2 (43-198)||(4778545-4778700)
chr2 (53-196)||(7646274-7646418)
chr2 (53-198)||(7448050-7448194)
chr2 (51-198)||(43397273-43397418)
chr2 (43-198)||(4098895-4099050)
chr2 (51-198)||(31788256-31788403)
chr2 (51-198)||(36943276-36943423)
chr2 (30-198)||(5428020-5428188)
chr2 (53-198)||(9169410-9169554)
chr2 (49-198)||(37876750-37876899)
chr2 (36-198)||(1421456-1421622)
chr2 (51-193)||(18763268-18763409)
chr2 (51-148)||(7678080-7678177)
chr2 (54-140)||(27097615-27097701)
chr2 (51-148)||(12677498-12677595)
chr2 (66-198)||(38444982-38445113)
chr2 (51-198)||(11985383-11985529)
chr2 (43-198)||(4904298-4904443)
chr2 (51-198)||(12648077-12648223)
chr2 (38-124)||(31128974-31129060)
chr2 (51-145)||(35220131-35220222)
chr2 (54-192)||(17994874-17995012)
chr2 (52-143)||(18107943-18108034)
chr2 (92-198)||(19062505-19062609)
chr2 (55-139)||(24461243-24461327)
chr2 (51-198)||(29279723-29279869)
chr2 (43-145)||(32448826-32448928)
chr2 (53-193)||(8809084-8809223)
chr2 (51-116)||(36691666-36691732)
chr2 (162-198)||(4041747-4041783)
chr2 (161-197)||(7678025-7678061)
chr2 (43-103)||(42698922-42698982)
chr2 (43-140)||(29574843-29574938)
chr2 (161-198)||(31128932-31128969)
chr2 (60-145)||(37994084-37994168)
chr2 (37-125)||(37416488-37416576)
chr2 (42-138)||(41694406-41694502)
chr2 (51-98)||(4042229-4042276)
chr2 (102-145)||(6436459-6436502)
chr2 (75-126)||(25509291-25509342)
chr2 (51-138)||(28718160-28718245)
chr2 (53-140)||(39311059-39311145)
chr2 (161-199)||(11833394-11833432)
chr2 (37-126)||(28871987-28872074)
chr2 (99-140)||(3308787-3308828)
chr2 (51-84)||(8809003-8809036)
chr2 (105-138)||(11833338-11833371)
chr2 (65-126)||(13120022-13120083)
chr2 (43-140)||(20145914-20146011)
chr2 (82-139)||(30400250-30400307)
chr2 (158-187)||(36691781-36691810)
chr2 (161-193)||(29173877-29173909)
[»] scaffold0088 (1 HSPs)
scaffold0088 (53-198)||(50578-50723)
[»] scaffold0017 (1 HSPs)
scaffold0017 (51-198)||(32900-33047)
[»] scaffold0026 (1 HSPs)
scaffold0026 (53-198)||(72016-72161)
[»] scaffold0127 (1 HSPs)
scaffold0127 (51-195)||(15282-15425)
[»] scaffold0445 (1 HSPs)
scaffold0445 (43-198)||(1126-1280)
[»] scaffold0219 (1 HSPs)
scaffold0219 (51-190)||(14998-15137)
[»] scaffold0634 (1 HSPs)
scaffold0634 (43-148)||(8296-8401)
[»] scaffold0009 (1 HSPs)
scaffold0009 (43-198)||(58232-58386)
[»] scaffold0087 (1 HSPs)
scaffold0087 (82-148)||(25531-25597)
[»] scaffold0603 (1 HSPs)
scaffold0603 (42-198)||(7499-7652)
[»] scaffold0554 (1 HSPs)
scaffold0554 (54-124)||(10672-10742)
[»] scaffold0262 (1 HSPs)
scaffold0262 (46-126)||(2041-2121)
[»] scaffold0154 (1 HSPs)
scaffold0154 (52-139)||(25124-25209)
[»] scaffold0492 (1 HSPs)
scaffold0492 (66-193)||(12721-12847)
[»] scaffold0121 (1 HSPs)
scaffold0121 (56-198)||(31422-31565)
[»] scaffold0064 (1 HSPs)
scaffold0064 (43-125)||(19261-19342)
[»] scaffold0888 (1 HSPs)
scaffold0888 (99-193)||(1832-1925)
[»] scaffold0049 (1 HSPs)
scaffold0049 (83-198)||(71437-71549)
[»] scaffold0136 (3 HSPs)
scaffold0136 (54-125)||(10264-10333)
scaffold0136 (162-193)||(37947-37978)
scaffold0136 (161-198)||(10193-10230)
[»] scaffold0039 (1 HSPs)
scaffold0039 (100-138)||(92939-92977)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 6e-70; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 22558801 - 22558616
Alignment:
Q  14 attatactctagtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttt 113  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  22558801 attattctctagtcaatgattctcttagatttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttt 22558702  T
Q  114 taggtcattttttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  22558701 taggtcattttttgacatagaatcacctctctacatcttttttcccctttttctttcaatctaaataagtggttttcacatctatc 22558616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 2520574 - 2520734
Alignment:
Q  38 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 137  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  2520574 ttagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatc 2520673  T
Q  138 acctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||| |||||||        ||| ||||| ||||||||||||||||||||||||||||||||    
T  2520674 acccctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatc 2520734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 4143061 - 4142907
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  4143061 tttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 4142962  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||| |||||||||||||||||||||| |||||||||||||||    
T  4142961 tctacatcttttttccccttttctttcaatctaaataagt-gttttcacatctatc 4142907  T

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Target: chr4; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 26633977 - 26633823
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |    
T  26633977 tttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcacccc 26633878  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    | ||||        | | ||||||||||||||||||||||||||||||||||||||    
T  26633877 tatacatctttttcctc-ttttctttcaatctaaataagtggttttcacatctatc 26633823  T

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Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 22610986 - 22611140
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||      
T  22610986 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttgacctagaatcaccca 22611084  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  22611085 tctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatc 22611140  T

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Target: chr4; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 19853808 - 19853664
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||| |||||||        
T  19853808 gagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctacatctt 19853710  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||| ||||||||||||||||||||||||||||||    
T  19853709 ttttccccttttcttccaatctaaataagtggttttcacatctatc 19853664  T

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Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 53810840 - 53810985
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||        
T  53810840 gagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccctctacatctt 53810939  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| |||||||||||| |||||||||| ||||||||||||||    
T  53810940 tttcccccttttctttcaatttaaataagtgattttcacatctatc 53810985  T

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Target: chr4; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 13633924 - 13634072
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-- 148  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||| |||||||||| |||||||      
T  13633924 gagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatagaatcacccctctacatc 13634022  T
Q  149 nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
            ||| ||||||||||||||||||||||||||||||||||||||    
T  13634023 ttttccccccccttttctttcaatctaaataagtggttttcacatctatc 13634072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 35348119 - 35348256
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||         
T  35348119 agaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcacctctctacatcttt 35348218  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcaca 192  Q
       ||| ||||||||||||||||||||||||||||||||    
T  35348219 tttccc-ttttctttcaatctaaataagtggttttcaca 35348256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 21686539 - 21686393
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||  ||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| || ||||||| |||||||      
T  21686539 gagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc-ttttttgacctaaaatcacccctctacatc 21686441  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||||||||||||||||||    
T  21686440 ttttttccccttttctttcaatctaaataagtggttttcacatctatc 21686393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 43510010 - 43510156
Alignment:
Q  52 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannn 151  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| |||||||||  |||||||       
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatct 43510109  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          || |||||||||||||||||||||||| |||||||| ||||    
T  43510110 ttttttcccttttctttcaatctaaataagtggctttcacatttatc 43510156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 10496152 - 10496292
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||| || ||||      
T  10496152 gagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatcacc-ctatacatc 10496250  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcaca 192  Q
          ||| |||||||| |||||||||||||||||||||||    
T  10496251 ttttttcccattttcttttaatctaaataagtggttttcaca 10496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 32766326 - 32766471
Alignment:
Q  54 agaaactccaacttct--ctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannn 151  Q
    ||||||||||||||||  ||| ||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||       
T  32766326 agaaactccaacttctttctaaaaaattt-tttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaatcacccctctacatct 32766424  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
         ||| |||||||||||||||| |||||| ||||||||||||||    
T  32766425 tttttccccttttctttcaatctaagtaagtgtttttcacatctatc 32766471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 9165342 - 9165199
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcat-tttttgacttagaatcacctctctacan 149  Q
    ||||||||||||||||||||| |||||||||||| ||| || ||||| |||||| |||||||||||||||| ||||| || |||||||||| |||||||     
T  9165342 gagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctacat 9165243  T
Q  150 nnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
            || || ||||||||||||||||||||||||||||||    
T  9165242 ctttttctcccttatctttcaatctaaataagtggttttcacat 9165199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 54021663 - 54021818
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| ||| |||||| |||||||||||||| |||| ||||| ||||  | ||||||||||||||||||||||| || ||||| | |    
T  54021663 tttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccc 54021762  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||  ||||||||||||||||||||||||||||||||| ||||    
T  54021763 tctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatc 54021818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 26091220 - 26091071
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||| | ||| |||||||| |||||||||| |||||||||| |    
T  26091220 tttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacccc 26091121  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    |||| |        | | |||| ||||||||||||||||||||||||||||    
T  26091120 tcta-atcttttttctccttttatttcaatctaaataagtggttttcacat 26091071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 24099355 - 24099222
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctacannnnnnnncccttttt 164  Q
    |||||| |||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||| |||||||| | |||||||        ||| ||||    
T  24099355 ttctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttcccctttt 24099256  T
Q  165 ctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||||||| ||||||||||||||    
T  24099255 ctttcaatctaaataagtgattttcacatctatc 24099222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 48257748 - 48257659
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  48257748 gagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatcacc 48257659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 56040915 - 56040796
Alignment:
Q  81 ctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaat 178  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||| |||||||         ||||| ||||||||||||||||    
T  56040915 ctttctccttcgttcactgaggagaggtggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaat 56040816  T
Q  179 aagtggttttcacatctatc 198  Q
    ||||||||||||||||||||    
T  56040815 aagtggttttcacatctatc 56040796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 9178167 - 9178309
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| ||  |||||| |||| |||||||||||||| |||||  |||||||||||| ||||||||||||||||| ||||||||||  ||||||      
T  9178167 gagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacccttctacatc 9178266  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
           || |||||||||||||||||||| ||||||||||||    
T  9178267 tttttctcccttttctttcaatctaaataaatggttttcacat 9178309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 53443927 - 53444032
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacct 141  Q
    |||||||| |||| ||||| |||||||||| |||||||| |||||| |||||||||||||||| | ||||||||||||| |||||||| ||||| ||||     
T  53443927 gtttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtca-tttttgacctagaaacaccc 53444025  T
Q  142 ctctaca 148  Q
    |||||||    
T  53444026 ctctaca 53444032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 62 - 198
Target Start/End: Original strand, 5119159 - 5119296
Alignment:
Q  62 caacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacctctctacannnnnnnnccct 160  Q
    |||||||| | |||||||| |||||||||| |||||  |||||||||||||||| |||| |||||| || |||||||||| |||||||        |||     
T  5119159 caacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaatcacccctctacatctttttccccc 5119258  T
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    | ||||||||||||||||||||||||||||||| ||||    
T  5119259 tcttctttcaatctaaataagtggttttcacatatatc 5119296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 22300647 - 22300744
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||| |||  || | ||||||| ||||||||||||||||||||||| || |||||||    
T  22300647 tttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacc 22300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 29961228 - 29961139
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||| || ||||| || |||||||| |||||||||| ||||||||||    
T  29961228 gagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttgacatagaatcacc 29961139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 47320708 - 47320612
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||| |||| |||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  47320708 tttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcac 47320612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 56156852 - 56156782
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcat 121  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||  |||| |||||||||||||||||    
T  56156852 gagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 33920848 - 33920937
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||| ||||||| |||||||||| |||||| ||  |||||||||||||| |||| ||||| ||| | ||||||||||||||||||||||    
T  33920848 cttagttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttt 33920937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 51888515 - 51888421
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||||||| |||||| ||| ||   |||||||||| |||  |||| ||||||||||||||||||||||||||||||| | |||||||| ||||    
T  51888515 gagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattgaatcacccctct 51888421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 9643179 - 9643276
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggagggg-tggttttaggtcattttttgacttagaatcac 139  Q
    ||||||| ||||||||||||||||||||| |||  ||||||| || || | |||| || |||||| |||||||| ||||||||||||| |||||||||    
T  9643179 tttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcac 9643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 18935588 - 18935686
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||||||| |||||||||||   ||||||| |||  |||||| ||| |||| |||| ||||||||||| ||| |||||| |||||||| ||||||||||    
T  18935588 gtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgacctagaatcacc 18935686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 43126694 - 43126764
Alignment:
Q  56 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||||||| |||||||||||| |  ||||||||| || |||||||| ||||||||| ||||||    
T  43126694 aaactccaacttctctctaaactttctttttttttcgttcatcgaagaggggtgattttaggtcttttttt 43126764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 51024760 - 51024714
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcat 97  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  51024760 gagagaaactccaacttctctctatactttctttctccttcgttcat 51024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 45418339 - 45418483
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||| ||||| |||||||||| ||||  || |||||||| | ||||| ||||||   |||||||||||||||||||||| |||||||| | |||||||      
T  45418339 gagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacctagaatcatccctctacacc 45418435  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  |||||| ||||| |||||||| ||||||||||| ||||    
T  45418436 tcttttcctcttttctctcaatataaataagaggttttcacatatatc 45418483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 10259188 - 10259097
Alignment:
Q  56 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| |  ||   ||||||||||||| |||||||| || ||||||| |||||||    
T  10259188 aaactccaacttctctctaaacattctttctccttcgtttattaaaaagaactggttttaggtca-tttttgacctaaaatcacccctctaca 10259097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 40066317 - 40066265
Alignment:
Q  74 aaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  40066317 aaactttctttctcattcgttcattgaattggggtggttttaggtcatttttt 40066265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 21662287 - 21662372
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    ||||||| || ||||  ||||| || ||| |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  21662287 tttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattcac-gaggaggggtggttttaggtcattttttgac 21662372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 21671051 - 21671136
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    ||||||| || ||||  ||||| || ||| |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  21671051 tttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattcac-gaggaggggtggttttaggtcattttttgac 21671136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 36161567 - 36161613
Alignment:
Q  94 tcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||    
T  36161567 tcatcgaggagaggtggttttaggtcattttttgacctagaatcacc 36161613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 43095550 - 43095587
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43095550 ttttctttcaatctaaataagtggttttcacatatatc 43095587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 43095471 - 43095518
Alignment:
Q  78 tttctttctccttcgttcattgaggaggggtggttttaggtcattttt 125  Q
    |||||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  43095471 tttctttctccttcattcgttgaggaagggtagttttaggtcattttt 43095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 27651750 - 27651899
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||| ||   ||||||| |||| |||||| ||| |||  |||| ||||||||||| | |||||||| |||||||| ||| ||||||      
T  27651750 tttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctaggatcaccca 27651849  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    ||| ||        |||  |||||||||||||||||||||| |||||||||    
T  27651850 tctgcatcttttttccc-atttctttcaatctaaataagtgattttcacat 27651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 29121954 - 29121889
Alignment:
Q  73 taaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    |||| ||| |||||||||||||||| ||||| |  |||||||||||||||||||||| || ||||||    
T  29121954 taaattttatttctccttcgttcatcgaggatga-tggttttaggtcattttttgacctaaaatcac 29121889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 36204687 - 36204586
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||| ||||||| ||||||| ||   |||||||||| |||  ||||  |||| || ||||||||||||||||||| || |||||||||| |    
T  36204687 tttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacccc 36204589  T
Q  143 tct 145  Q
    |||    
T  36204588 tct 36204586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 13863164 - 13863193
Alignment:
Q  107 gtggttttaggtcattttttgacttagaat 136  Q
    ||||||||||||||||||||||||||||||    
T  13863164 gtggttttaggtcattttttgacttagaat 13863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 22038989 - 22038953
Alignment:
Q  162 tttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  22038989 tttctttctatctaaataagtgattttcacatctatc 22038953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 29120547 - 29120515
Alignment:
Q  166 tttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||||||| ||||    
T  29120547 tttcaatctaaataagtggttttcacatatatc 29120515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 40066244 - 40066212
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacat 193  Q
    |||||||||||| ||||||||||||||||||||    
T  40066244 ttttctttcaatataaataagtggttttcacat 40066212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 52944231 - 52944263
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacat 193  Q
    ||||||||||||||||||||||| |||||||||    
T  52944231 ttttctttcaatctaaataagtgattttcacat 52944263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 3e-59; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 29738959 - 29738788
Alignment:
Q  27 caatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29738959 caatgattctcttaggtctttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttt 29738860  T
Q  127 gacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
     || |||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  29738859 tacctagaatcacccctctacatctttttcccctttttctttcaatctaaataagtggttttcacatctatc 29738788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 45415338 - 45415499
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||| ||| |||||||||| |||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||  ||||||    
T  45415338 cttagttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaat 45415437  T
Q  137 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||| |||||||        ||| |||||||||||| |||||||||||||||||||||||||    
T  45415438 cacccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatc 45415499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 5983606 - 5983777
Alignment:
Q  28 aatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttg 127  Q
    |||||||||||||| ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||    
T  5983606 aatgattctcttagatttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttg 5983705  T
Q  128 acttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    || |||||||||   ||||||         ||||||||||||| |||||||||| |||||||||||||||||    
T  5983706 acctagaatcactcgtctacatcttttttcccctttttctttcgatctaaataaatggttttcacatctatc 5983777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 11462763 - 11462599
Alignment:
Q  35 ctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttaga 134  Q
    |||||| || |||| ||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  11462763 ctcttatgtctttatagagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctaga 11462664  T
Q  135 atcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||| |||| ||         |||||||||||||||||||||||||||| |||||||||||||    
T  11462663 atcacccctctgcatcttttttcccctttttctttcaatctaaataagtgggtttcacatctatc 11462599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 31983965 - 31984120
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||| ||||| ||||||    
T  31983965 tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctc 31984064  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||         || ||||||||| ||||||||||||||||||||||| ||||    
T  31984065 tctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatc 31984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 7337959 - 7337815
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||  |||||||||| |||||||         
T  7337959 agaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgatctagaatcacccctctacatcttt 7337860  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
       ||  ||||||||||||||||||||||||||||||||||||||    
T  7337859 tttcctcttttctttcaatctaaataagtggttttcacatctatc 7337815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 34878570 - 34878430
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||   ||||||      
T  34878570 gagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcactcatctacatc 34878471  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcaca 192  Q
           || |||||||||||| |||||||||||||||||||    
T  34878470 tttttt-ccattttctttcaatttaaataagtggttttcaca 34878430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 35462351 - 35462189
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaa 135  Q
    ||||| ||||||| | ||||||||| ||||| ||| |||||||||||||||||||||| |||||| | |||||||||||||||||| |||| || |||||    
T  35462351 cttagttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcattttttttacatagaa 35462252  T
Q  136 tcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||| | |||||||        ||| |||||||||||| |||||||||||||||||||||||||    
T  35462251 tcatccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatc 35462189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 32394818 - 32394938
Alignment:
Q  77 ctttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaa 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| ||        ||| ||||||||||||||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttcccc-ttttctttcaatctaa 32394916  T
Q  177 ataagtggttttcacatctatc 198  Q
    || |||||||||||||||||||    
T  32394917 atgagtggttttcacatctatc 32394938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 35484677 - 35484599
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  35484677 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgac 35484599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 1742060 - 1742220
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||| ||| ||||||||||| ||||||| | ||||||| ||||||| |||||||||  ||||  |||||||||||||||||||||||| ||||||    
T  1742060 cttagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaat 1742159  T
Q  137 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||| |||| ||        ||| ||||||||||||||||||||||||||||||||| ||||    
T  1742160 cacccctctccatcttttccccc-ttttctttcaatctaaataagtggttttcacatatatc 1742220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 10776767 - 10776670
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||| ||||||||||    
T  10776767 tttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacc 10776670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 14872418 - 14872570
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||||||| ||||||||||||||||||| | | |||||||||||| |||| ||||| ||| ||| |||||||| |||||||||||||||||||||    
T  14872418 cttagttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaat 14872517  T
Q  137 cacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggtttt 188  Q
    |||  |||||||         |||||||||||||||| |||||||||||||||    
T  14872518 cactcctctacatctttttttccctttttctttcaatgtaaataagtggtttt 14872570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 41176977 - 41177047
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattt 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 51916959 - 51916812
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| ||| || ||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| || ||||||       
T  51916959 tttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatcactca 51916860  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttca 190  Q
    ||||||         |  ||||||||||||||||||||||||||||||    
T  51916859 tctacatctttttttctcttttctttcaatctaaataagtggttttca 51916812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 15435171 - 15435030
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||||||||||||||  |||| |||||||| |||| |||||  |||||||| ||||||||||||||||||||  |||||||| | |||||||      
T  15435171 gagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctctacatc 15435072  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
          ||| ||||||||||||||||||||||| |||||||||    
T  15435071 ttttttccc-ttttctttcaatctaaataagtgtttttcacat 15435030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 7837059 - 7836976
Alignment:
Q  57 aactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||||||| ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacc 7836976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 18939109 - 18939209
Alignment:
Q  45 tttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctc 144  Q
    ||||| |||||||||| || ||||||| |||  |||||||||||||| || || |||||| |||||||||||||||||||||||  ||||||||||||||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctc 18939208  T
Q  145 t 145  Q
    |    
T  18939209 t 18939209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 21947930 - 21947770
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||| ||| |||||||||| ||| || ||| ||||||||||||||| ||||||||| ||||| |||||||||||||| | ||||| || ||||||    
T  21947930 cttagttttctagtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggtggttttaggtta-tttttaacctagaat 21947833  T
Q  137 cacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    || |  ||||||         ||| ||||||||||||||||||||||||||||||||||||||    
T  21947832 catccatctacatatttttttccccttttctttcaatctaaataagtggttttcacatctatc 21947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 23291922 - 23291795
Alignment:
Q  73 taaactttctttctccttcgttcattgaggaggggtgg---ttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttc 169  Q
    ||||||||||||||||||||||||| ||| | ||||||   ||||||||||||||||||| |||||||||| ||| |||        | | |||||||||    
T  23291922 taaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacccctcgacatcttttttctc-ttttctttc 23291824  T
Q  170 aatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||| ||||    
T  23291823 aatctaaataagtggttttcacatatatc 23291795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 45789344 - 45789498
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||||||| ||||||||||| |  |||||| |||| ||| ||||| |||| ||||| |||||  | |||||||||||||||||||||| ||||||    
T  45789344 cttagttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaat 45789443  T
Q  137 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    |||| |||| ||        |||  ||||||||||| ||||||||||||||||||||    
T  45789444 cacccctctgcatctttttcccc--tttctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 191
Target Start/End: Original strand, 21686658 - 21686804
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| |||||| | | |||| |||||||||| ||||||||| |||||| | || ||||||||||||||||||  |||||||| |||    
T  21686658 tttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaatca-ctc 21686756  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcac 191  Q
    ||||||         || |||||||||||| ||||||||||||||||||    
T  21686757 tctacatctttttt-ccattttctttcaatttaaataagtggttttcac 21686804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 44915449 - 44915577
Alignment:
Q  62 caacttctctataaactttctttctccttcgttcattgaggagggg-tggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccct 160  Q
    |||||||||| ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||| ||||| | |||||||        ||      
T  44915449 caacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaatcatcactctacatcttttttcctc 44915548  T
Q  161 ttttctttcaatctaaataagtggttttc 189  Q
    || |||||| |||||||||||||||||||    
T  44915549 ttatctttccatctaaataagtggttttc 44915577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 4413085 - 4413168
Alignment:
Q  39 taggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt 122  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||||||| ||||||| || ||||||| || |||||||||||||    
T  4413085 taggtctttagagagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt 4413168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 36894535 - 36894394
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    |||||||| |||||||||| |||| |||||||||||   |||||| || ||||||||||| || ||||||||||||| |||| ||||| |||||||        
T  36894535 gagaaacttcaacttctctttaaattttctttctcc---gttcatcgaagaggggtggttctaagtcattttttgacctagagtcacccctctacatctt 36894439  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||  ||||||||| |||||||||||||| |||||||||||||    
T  36894438 ttttcctcttttctttcgatctaaataagtgg-tttcacatctatc 36894394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 3228068 - 3228152
Alignment:
Q  56 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||||||||||||||  |||| ||| |||||||||| |||||  ||||||||||||||||||||||||||| || || |||||||    
T  3228068 aaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatcacc 3228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 193
Target Start/End: Original strand, 26535179 - 26535329
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||| ||| ||||||||||| ||||||||| |||||||||| ||||||||||||||  |||| | |||||||||||     ||||||| ||||||    
T  26535179 cttagttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttagg-----ttttgacctagaat 26535273  T
Q  137 cacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    |||   ||||||         || |||||||||||||||||||||||||||||||||    
T  26535274 cacacatctacatctttttctcc-ttttctttcaatctaaataagtggttttcacat 26535329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 32679406 - 32679311
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 138  Q
    ||||||| |||||||| |||||||| ||| |||  |||||||||| |||  || | ||||||||||||||||| ||||||||||||| ||||||||    
T  32679406 tttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaatca 32679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 49626703 - 49626797
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    ||||||||||||||||||||| |||   ||| ||||| |||  |||| |||||||||||||||||||||||| |||||| || ||||||| ||||    
T  49626703 gagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcacccctct 49626797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 198
Target Start/End: Complemental strand, 8212195 - 8212062
Alignment:
Q  65 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnncccttttt 164  Q
    ||||||| |||| ||| |||||||||| |||||  |||||||||| |||||| | |||||||||  || |||||||||||||||          | ||||    
T  8212195 cttctctttaaaatttttttctccttcattcatcaaggaggggtgcttttagattattttttgatctacaatcacctctctacatcttttttttcctttt 8212096  T
Q  165 ctttcaatctaaataagtggttttcacatctatc 198  Q
    |||| |||||||||||||||||||||||| ||||    
T  8212095 ctttaaatctaaataagtggttttcacatatatc 8212062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 15836001 - 15836127
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 165  Q
    |||||| | ||||||||||||| ||  |||||  ||||| |||||||||||||||||||||||| |||||||||| || ||||         || |||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctcc-ttttc 15836099  T
Q  166 tttcaatctaaataagtggttttcacat 193  Q
    | ||||| ||||||||||||||||||||    
T  15836100 tatcaatttaaataagtggttttcacat 15836127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 27456325 - 27456472
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtc-attttttgacttagaatcacct 141  Q
    ||||||| |||| ||||| |||||||| | ||||||||||||||||||| ||| | |||||||| ||||||||  ||  |||||| || || ||||||      
T  27456325 tttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggttttaactctttttttttacctaaaatcactc 27456424  T
Q  142 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttc 189  Q
    |||||||        ||  |||||||||||||||||||||||||||||    
T  27456425 ctctacatcttttttcctcttttctttcaatctaaataagtggttttc 27456472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 50377148 - 50377260
Alignment:
Q  78 tttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaa 177  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||| |||||||| | |||| ||        ||| |||||||||||| ||||    
T  50377148 tttctttctccttcgttcatcgaagagga-tggttttaggtcattttttgacctagaatcatccctct-ca-tttttttcccattttctttcaatttaaa 50377244  T
Q  178 taagtggttttcacat 193  Q
    ||||||||||||||||    
T  50377245 taagtggttttcacat 50377260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 9341571 - 9341608
Alignment:
Q  104 ggggtggttttaggtcattttttgacttagaatcacct 141  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9341571 ggggtggttttaggtcattttttgacttagaatcacct 9341608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 35484580 - 35484543
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35484580 ttttctttcaatctaaataagtggttttcacatctatc 35484543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 44543058 - 44543153
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 138  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  |||| ||||| ||||| |||||||| ||| |||||| || |||||    
T  44543058 tttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatca 44543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 16161640 - 16161719
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||| |||| |||||| ||| |||   ||| ||||||||||  |||||||||| |||||||| |||||||||||||||    
T  16161640 ttctctctaaattttcttcctctttcacacatcgaggaggggtaattttaggtcaatttttgacctagaatcacctctct 16161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 12634952 - 12635049
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| ||||||||||| ||||||||| ||   ||| |||||| |||  || | ||||| | |||||||||||||||||| |||| || |||||||    
T  12634952 tttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataatcacc 12635049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 31317550 - 31317635
Alignment:
Q  57 aactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    |||||||  |||||| |||| |||||||||| ||| ||||| |||| |   ||||||||||| |||| ||||| ||||||||||||    
T  31317550 aactccacattctctctaaattttctttctctttcattcatcgaggcgttatggttttaggtaatttgttgacatagaatcacctc 31317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 31918892 - 31918929
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  31918892 ttttctatcaatctaaataagtggttttcacatatatc 31918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 10776647 - 10776615
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacat 193  Q
    |||||||||||||||||||||||||||| ||||    
T  10776647 ttttctttcaatctaaataagtggtttttacat 10776615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 13145000 - 13144972
Alignment:
Q  162 tttctttcaatctaaataagtggttttca 190  Q
    |||||||||||||||||||||||||||||    
T  13145000 tttctttcaatctaaataagtggttttca 13144972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 48061188 - 48061362
Alignment:
Q  25 gtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 124  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  48061188 gtcaatgattcttttaggtttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcatttt 48061287  T
Q  125 ttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||| | |||||         ||||||||||||||||||||||||||||||||||||||||||    
T  48061288 ttgacttagaatcaccccactacatattttttcccctttttctttcaatctaaataagtggttttcacatctatc 48061362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 12141625 - 12141459
Alignment:
Q  33 ttctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgactta 132  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  12141625 ttcttttaggtttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacata 12141526  T
Q  133 gaatcacctctctacannnnnnnnccc-tttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||| |||||||        ||| ||||| |||||||||||||||||||||||||||||||||    
T  12141525 gaatcacccctctacatcttttttcccttttttatttcaatctaaataagtggttttcacatctatc 12141459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 37837757 - 37837616
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  37837757 gagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 37837658  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
          ||| ||||||||||||||||||||||||||| |||||    
T  37837657 ttttttccc-ttttctttcaatctaaataagtggtttacacat 37837616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 9450436 - 9450288
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||  ||||||      
T  9450436 gagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcacccatctacatc 9450337  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatct 199  Q
          ||| ||||||||||||||||||||||| |||||||||||||||    
T  9450336 ttgtttccccttttctttcaatctaaataagtgattttcacatctatct 9450288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 30757126 - 30756971
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | |||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||| |    
T  30757126 tttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccc 30757027  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||| ||||||||||||||||||||||| ||||||||||||||    
T  30757026 tctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatc 30756971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 42978400 - 42978543
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-n 149  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  42978400 gagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatc 42978499  T
Q  150 nnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
           ||| |||||  ||||||||||||||||||||||||||    
T  42978500 tttttctccccttttcgatcaatctaaataagtggttttcacat 42978543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 19405061 - 19404912
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| ||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||| |    
T  19405061 tttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccc 19404962  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    ||||||         || |||||||||||||||||||||||||||||||||    
T  19404961 tctacatctttttttcc-ttttctttcaatctaaataagtggttttcacat 19404912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 34899911 - 34899759
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||| |||||||||| |    
T  34899911 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcaccgatga---gtggttttaggtcattttttgacctagaatcacccc 34899815  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||         || ||||||||||||||||||||||||||||||||||||||    
T  34899814 tctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatc 34899759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 48317108 - 48316964
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    |||||||| ||||||||| |||| || |||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||| |||||||         
T  48317108 agaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctacatcttt 48317009  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
       ||| |||||||||||| |||||||||||||||||||||||||    
T  48317008 ttcccccttttctttcaatttaaataagtggttttcacatctatc 48316964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 8013772 - 8013667
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||| |||||||||| |    
T  8013772 tttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccc 8013673  T
Q  143 tctaca 148  Q
    ||||||    
T  8013672 tctaca 8013667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 39171891 - 39171743
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-n 149  Q
    |||| |||||||||| | ||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||      
T  39171891 gagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctacatc 39171792  T
Q  150 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
            |||||||||||| |||||||||||||||||||| |||||||    
T  39171791 ttttttttcctttttctttcgatctaaataagtggttttcatatctatc 39171743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 47590098 - 47590250
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||| |||||||||||| |||| |||||||||| ||||||||| ||||||||||| |||||||||| |||||||  |||||||||| |    
T  47590098 tttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtca-tttttgaactagaatcacccc 47590196  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||  | ||||||||||||||||||||||||||||||| ||||    
T  47590197 tctacatttttttccc--tattctttcaatctaaataagtggttttcacatatatc 47590250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 13797230 - 13797084
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| |||| |||||||||| ||||||||| ||||| || ||||||||||||||||||| || |||||||||| |||||||      
T  13797230 gagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccctctacatc 13797131  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| |||||||||||| |||||||||| |||| |||||||||    
T  13797130 tttttcccc-ttttctttcaatttaaataagtgattttaacatctatc 13797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 19296662 - 19296797
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | |||||||||||||||| || |||  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  19296662 tttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 19296761  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaat 178  Q
    ||||||        ||| ||||||||||||||||||    
T  19296762 tctacatcttttttccccttttctttcaatctaaat 19296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 24770055 - 24770193
Alignment:
Q  59 ctccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnncc 158  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||  |||||| |||||||||||||| ||||||||||||| |  ||||||              
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatcatccatctacatctttttttt 24770154  T
Q  159 ctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    | ||||||||||||||||||||||||||||||||| ||||    
T  24770155 c-ttttctttcaatctaaataagtggttttcacatatatc 24770193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 40992976 - 40993121
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnn 151  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||| |||||  ||| |||||||||||||||||||| || ||||||  |||||||        
T  40992976 gagaaactccaacttctctctaaactttagttcttcttcgttcatcgagga-tggtagttttaggtcattttttgacctaaaatcactcctctacatctt 40993074  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
         ||  ||||||||||||||||||||||||||||||||||||||    
T  40993075 tttttccacttttctttcaatctaaataagtggttttcacatctatc 40993121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 38798584 - 38798717
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||    ||||| ||||||||||||||| |||||| ||||||||||  ||||||        
T  38798584 gagaaactccaacttctgtctgaactttctttctcattcgttcat---cgagggatggttttaggtcattctttgacatagaatcacccatctacatctc 38798680  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttca 190  Q
         ||||||||||||||| |||||||||||||||||    
T  38798681 tttt-cctttttctttcaatttaaataagtggttttca 38798717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 5078700 - 5078598
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| |||||||||| |||  | ||||| || |||  ||||| |||| ||||| ||||||||||||||||||| |||||||||| |    
T  5078700 tttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacccc 5078601  T
Q  143 tct 145  Q
    |||    
T  5078600 tct 5078598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 45350491 - 45350433
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtg 109  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||    
T  45350491 gagagaaacttcaacttctctctaaactttttttctccttcgttcatagaggaggggtg 45350433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 39329092 - 39329017
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||| ||||| | | |||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||    
T  39329092 gagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttt 39329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 9915941 - 9916011
Alignment:
Q  56 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||||||||  ||||||||||||||||||||| || |||||||| |  ||||||||| ||||||    
T  9915941 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9916011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 9923853 - 9923923
Alignment:
Q  56 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||||||||  ||||||||||||||||||||| || |||||||| |  ||||||||| ||||||    
T  9923853 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 25287488 - 25287402
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||||| ||| | || ||| |||||||||| || ||| ||||||    
T  25287488 tttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttgac 25287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 35132757 - 35132884
Alignment:
Q  65 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnncccttttt 164  Q
    ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| |||||||||| |||||||        |||  |||    
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttccc-cttt 35132855  T
Q  165 ctttcaatctaaataagtggttttcacat 193  Q
    |||| |||||||||||||| |||||||||    
T  35132856 cttttaatctaaataagtgattttcacat 35132884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 4529871 - 4530018
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| || ||||||| |||   ||||||||||||| |||||  | ||| |||| ||||||||||||||||||| ||||| || | | |||||      
T  4529871 gagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacatagaaccatcccgctacatc 4529970  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          |||| ||||||||||||||| |||||  ||||||||| ||||    
T  4529971 ttttttccctctttctttcaatctaagtaagtatttttcacatatatc 4530018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 22087123 - 22087197
Alignment:
Q  65 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    ||||||| |||  |||||||||||||| || || || ||||| ||||||| |||||||||||||| |||||||||    
T  22087123 cttctctctaagttttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaatcac 22087197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 45350051 - 45349962
Alignment:
Q  101 ggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcac 191  Q
    |||||| |||||||||||||||||||||| ||||||||||  |||||          ||||||||||||||| ||||||||||||||||||    
T  45350051 ggagggttggttttaggtcattttttgacctagaatcacccatctac-ttcttttttcctttttctttcaatttaaataagtggttttcac 45349962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 24351150 - 24351053
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| |||||||||||   ||||||| |||  |||||| |||  ||  |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  24351150 tttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 24351053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 3224730 - 3224642
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 125  Q
    ||||| ||||||| |||||||| |||||||| | | |||| |||||||||| |||  || | || || |||||||||||||||||||||    
T  3224730 cttagttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt 3224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 38051336 - 38051276
Alignment:
Q  80 tctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| ||||  ||||| |||||||||||||||||||||| |||| || ||||||||||    
T  38051336 tctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacc 38051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 1749426 - 1749351
Alignment:
Q  65 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 1749351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 5348890 - 5348794
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| || ||||||| || ||||| | |||  |||||||||||||  ||||| |||||| ||| ||||||||| | |||||||| ||||||||||    
T  5348890 tttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggt-gttttaggtaagtttttgacctagaatcacc 5348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 28476063 - 28476104
Alignment:
Q  99 gaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  28476063 gaggaggggtgattttaggtcaatttttgacctagaatcacc 28476104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 24350709 - 24350741
Alignment:
Q  43 tttttagagagagaaactccaacttctctataa 75  Q
    ||||||| |||||||||||||||||||||||||    
T  24350709 tttttagtgagagaaactccaacttctctataa 24350741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 39228862 - 39228898
Alignment:
Q  106 ggtggttttaggtcattttttgacttagaatcacctc 142  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  39228862 ggtgattttaggtcattttttgacctagaatcacctc 39228898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 49148280 - 49148244
Alignment:
Q  162 tttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  49148280 tttctttcaaactaaataagtggttttcacatatatc 49148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 31013868 - 31013720
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  31013868 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 31013769  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatct 199  Q
          ||| |||||||||||||||||||||||||||||||||||||||    
T  31013768 tttttcccccttttctttcaatctaaataagtggttttcacatctatct 31013720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 23230414 - 23230583
Alignment:
Q  29 atgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 128  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||    
T  23230414 atgattctcttaggtctttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttga 23230512  T
Q  129 cttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |  | ||||||| |||||||         |||||||||||||||||||||||||||||||||| |||||||    
T  23230513 ccaaaaatcacccctctacatcttttttcccctttttctttcaatctaaataagtggttttcatatctatc 23230583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 17693924 - 17693814
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 136  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  17693924 cttagttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcat-ttttgacctagaat 17693826  T
Q  137 cacctctctaca 148  Q
    || | |||||||    
T  17693825 catccctctaca 17693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 10377491 - 10377623
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||  ||||||        
T  10377491 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa-caccaatctacatctt 10377589  T
Q  153 nnnnccctttttctttcaatctaaataagtggtt 186  Q
        ||| || |||||||||||||||||||||||    
T  10377590 tttcccccttctctttcaatctaaataagtggtt 10377623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 51 - 196
Target Start/End: Original strand, 37971087 - 37971229
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||||   |||||||||||||||||||||| |||||||||| |||||||      
T  37971087 gagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag---tggttttaggtcattttttgacctagaatcacccctctacatc 37971183  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatcta 196  Q
          ||| ||||||||||||||||||||||| ||||||||||||    
T  37971184 ttttttccccttttctttcaatctaaataagtgattttcacatcta 37971229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 20560041 - 20559896
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||      
T  20560041 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca-- 20559944  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||| ||||||||||||||    
T  20559943 ttttttccccttttctttcaatctaaataagtgattttcacatctatc 20559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 20571603 - 20571458
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||      
T  20571603 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca-- 20571506  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||| ||||||||||||||    
T  20571505 ttttttccccttttctttcaatctaaataagtgattttcacatctatc 20571458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 25191371 - 25191274
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||||||||    
T  25191371 tttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacc 25191274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 45446108 - 45446011
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||||||| |||||||||    
T  45446108 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatcatctctctaca 45446011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 29937907 - 29938045
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||| |||||||||| |||||||      
T  29937907 gagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatca-tttttgacctagaatcacccctctacatc 29938005  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttca 190  Q
          | | ||||||||||| ||||||||||||||||||    
T  29938006 ttttttcgccttttctttcaacctaaataagtggttttca 29938045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 7677577 - 7677431
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||| |||||| || |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  7677577 gagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca-t 7677479  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          | ||||||||||| |||||||||| | |||||||||| ||||    
T  7677478 ctcattcactttttctttcgatctaaataaattgttttcacatatatc 7677431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 51 - 197
Target Start/End: Complemental strand, 20553542 - 20553397
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| ||| |||||||||| | | |||      
T  20553542 gagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcaccccacaacatt 20553443  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctat 197  Q
          ||| ||||||||||||||||||||||| |||||||||||||    
T  20553442 ttttttccc-ttttctttcaatctaaataagtgattttcacatctat 20553397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 40211617 - 40211455
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaa 135  Q
    ||||| ||| ||| |||||||||||||| |||||| |||| ||||||||||||||||| || |||||||||||| ||||||| | ||||||||| |||||    
T  40211617 cttagttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaa 40211518  T
Q  136 tcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||| |||||||         |  ||||||||||||||||||||| ||||||||||||||||    
T  40211517 tcacccctctacatcttttttactcttttctttcaatctaaataagcggttttcacatctatc 40211455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 7883544 - 7883390
Alignment:
Q  44 ttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 143  Q
    |||||| |||||||||| |||||||| | |||| |||||||||| ||||||||| || || | ||||||||||||||| ||||||  || ||||||| ||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcat-ttttgatctataatcacccct 7883446  T
Q  144 ctacannnnnnnnccct-ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||        |||| ||||||||||||||||||||||||||||||||||||||    
T  7883445 ctacatcttttttccctcttttctttcaatctaaataagtggttttcacatctatc 7883390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 27110761 - 27110614
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| || || ||||||||||||||||||||||||  || ||||||   ||||||      
T  27110761 gagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacacatctacatc 27110662  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
           |  ||||||||||||||||||||||||| ||||||| ||||    
T  27110661 ttttttactcttttctttcaatctaaataagtggtcttcacatatatc 27110614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 193
Target Start/End: Original strand, 3673241 - 3673378
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||| || ||||| ||||||||||||| |||||||| |||||||| | |||||||         
T  3673241 agaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca-tttttgacctagaatcatccctctacatcttt 3673339  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacat 193  Q
       ||| |||||||||||||||||||||||||| ||||||    
T  3673340 tgcccc-ttttctttcaatctaaataagtggttatcacat 3673378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 8412646 - 8412571
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  8412646 gagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 8980981 - 8981121
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || | ||||||||||||||||||||||||||||||| || ||||||| |    
T  8980981 tttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccc 8981080  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtg 183  Q
    | | ||        ||| |||||||||||||||||||||||    
T  8981081 tatgcatcctttttccccttttctttcaatctaaataagtg 8981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 33214928 - 33214840
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtc-attttttgacttagaatca 138  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||    
T  33214928 gagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatca 33214840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 28897503 - 28897642
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||| | |||||| || |||| |||| ||| | ||||||||||||||||| ||||||||||||  || ||||||| |||||||      
T  28897503 gagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcacccctctacatc 28897602  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttca 190  Q
          ||  ||||||||||||||||||||||||||||||    
T  28897603 ttttttcctcttttctttcaatctaaataagtggttttca 28897642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 1236998 - 1236912
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  1236998 tttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgac 1236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 14545198 - 14545052
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca-cctctctacannn 151  Q
    ||||||||||||||||||| ||||     |||||||||| ||| || |||| | ||||||||||||||||||||||| || ||||| ||||||||||       
T  14545198 gagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttgacctaaaatcaccctctctacatct 14545099  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          |  ||||||||||||||||||||||||||||||||| ||||    
T  14545098 ttttttctcttttctttcaatctaaataagtggttttcacatatatc 14545052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 15344089 - 15344176
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15344089 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15344176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 15433154 - 15433241
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15433154 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 15524458 - 15524545
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15524458 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15524545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 1239700 - 1239606
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||||||| |||||||||| |||  |||| ||||| | || |||| ||||||||||||||||||||| || |||||| || ||||||| ||||    
T  1239700 gagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcacccctct 1239606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 8443814 - 8443729
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||| ||||| |||| | |||| |||||||||| ||| |||||  || |||||||||||||||||||||||| |||||||||||||    
T  8443814 agaaattccaatttctttttaaattttctttctctttcattcatcaag-aggggtggttttaggtcattttttaacttagaatcacc 8443729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 27498632 - 27498565
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 118  Q
    |||||||||| |||||| ||| ||| ||||||||||||||| ||||| || |||||| ||||||||||    
T  27498632 gagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 36948742 - 36948658
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcatt-gaggaggggtggttttaggtcatttttt 126  Q
    ||||||| |||| ||||| |||||||||| ||||||||||||||||||  ||||||  ||  ||||| |||||||||| ||||||    
T  36948742 tttttagtgagacaaacttcaacttctctttaaactttctttctcctttattcattatagagggggtagttttaggtcgtttttt 36948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 41684225 - 41684320
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 146  Q
    |||||||||||||||||| || ||  ||||||||||||||| |||||  |||    |||||||||||||| ||||| || || ||||||| |||||    
T  41684225 gagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagtttttaacctaaaatcacccctcta 41684320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 8826043 - 8826089
Alignment:
Q  94 tcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  8826043 tcatcgaggatgggtggttttaggtcattttttgatctagaatcacc 8826089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 24099565 - 24099465
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| |||||||||| ||   |||||||||| |||  |||| ||| |||| ||| |||||||||| ||||||| |||||||||| |    
T  24099565 tttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg-tggctttaggtcat-ttttgacctagaatcacccc 24099468  T
Q  143 tct 145  Q
    |||    
T  24099467 tct 24099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 14916385 - 14916345
Alignment:
Q  99 gaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  14916385 gaggaggggtggttttaggtcat-ttttgacctagaatcacc 14916345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 29617762 - 29617665
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| |||||||| | |||||||||| |||| ||| |||||| |||  | || || |||  || |||||||||||||||||||| || |||||||    
T  29617762 tttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatcacc 29617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 36948625 - 36948596
Alignment:
Q  161 ttttctttcaatctaaataagtggttttca 190  Q
    ||||||||||||||||||||||||||||||    
T  36948625 ttttctttcaatctaaataagtggttttca 36948596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 3240194 - 3240242
Alignment:
Q  78 tttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||| | || || ||||||||||||| ||||||||||||||||    
T  3240194 tttctttctcttccggtcgttgaggaggggtgattttaggtcatttttt 3240242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 14585601 - 14585633
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacat 193  Q
    ||||||||||||||||||||||| |||||||||    
T  14585601 ttttctttcaatctaaataagtgattttcacat 14585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 41896413 - 41896445
Alignment:
Q  162 tttctttcaatctaaataagtggttttcacatc 194  Q
    |||||||||||||||||||||| ||||||||||    
T  41896413 tttctttcaatctaaataagtgattttcacatc 41896445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 2297 - 2124
Alignment:
Q  25 gtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||| ||||||||    
T  2297 gtcaatgattctcttaggtttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcatttt 2198  T
Q  125 ttgacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||  |||||||||| |||||||         |||||||||||||||||||||||||||| |||||||||||||    
T  2197 ttgatctagaatcacccctctacatcttttttcccctttttctttcaatctaaataagtgg-tttcacatctatc 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 12170286 - 12170433
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  12170286 gagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 12170385  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||||||||||||||||||    
T  12170386 ttttttccccttttctttcaatctaaataagtggttttcacatctatc 12170433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 33053465 - 33053320
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||        
T  33053465 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctctacatctt 33053366  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  33053365 ttttccccttttctttcaatctaaataagtggttttcacatctatc 33053320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 7515521 - 7515353
Alignment:
Q  31 gattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgac 129  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||| | | |||||||||    
T  7515521 gattctcttaggtttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgac 7515422  T
Q  130 ttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
     |||||||||| |||||||        ||||||||||| ||||||||||||||||||||||||||||||    
T  7515421 ctagaatcacccctctacattttgttcccctttttcttccaatctaaataagtggttttcacatctatc 7515353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 23128411 - 23128556
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||        
T  23128411 gagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctctacatctt 23128510  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| |||||||||| |||||||||||||||||||||||||||    
T  23128511 tttccccattttctttcattctaaataagtggttttcacatctatc 23128556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 605997 - 606142
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||| |||||| |||||||        
T  605997 gagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctctacatctt 606096  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  606097 ttttccccttttctttcaatctaaataagtggttttcacatctatc 606142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 3913872 - 3913726
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||| |||  ||      
T  3913872 gagagaaactccaacttctctctaaactttctttctcctttgttcatcgagga-gggtggttttaggtcattttttgacctagaatcacccctccgcatc 3913774  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| || |||||||||||||||||||||||||||||||||||    
T  3913773 ttttttcccattctctttcaatctaaataagtggttttcacatctatc 3913726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 68297 - 68153
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca-cctctctacannn 151  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | |||||||| |||||||| || |||||||       
T  68297 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggt-aatttttgacctagaatcaccccctctacatct 68199  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
         ||| |||||||| |||||||||||||||||||||||||||||    
T  68198 ttttcccc-ttttcttttaatctaaataagtggttttcacatctatc 68153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 30894428 - 30894569
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| |||||||| ||||||||||||| || |||||||||||||||||| |||||||||||| |||||||||| |||||||      
T  30894428 gagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctacatc 30894526  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
           || |||||||||||||||||||| ||||||||||||    
T  30894527 tgtttttcccttttctttcaatctaaataactggttttcacat 30894569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 198
Target Start/End: Original strand, 34018373 - 34018498
Alignment:
Q  73 taaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaat 172  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||| |||||||||| |||||||        ||| ||||||||||||    
T  34018373 taaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttcaat 34018472  T
Q  173 ctaaataagtggttttcacatctatc 198  Q
     |||||||||||||||||||| ||||    
T  34018473 ttaaataagtggttttcacatatatc 34018498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 29320153 - 29320064
Alignment:
Q  59 ctccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  |||||||||| |||||||    
T  29320153 ctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctctaca 29320064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 32328882 - 32328793
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||| |||||||| || |||||||    
T  32328882 gagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatcacc 32328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 9723675 - 9723602
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcat-tgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||    
T  9723675 agaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 32059700 - 32059845
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||| ||||| |||||| ||||| ||||||||| ||| ||||| |||||  |||||||||| |||||| |||||| |||||||| |  ||||||      
T  32059700 gagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatcatccttctacatc 32059799  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  |||||||||||||||||||||| |||||||||| ||||    
T  32059800 tttttccc--ttttctttcaatctaaataagtagttttcacatgtatc 32059845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 4010807 - 4010705
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||| || ||||||| |||  |||||||||||||  || |||||||||| |||  ||||| |||||||||||| |||||||||| |    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccc 4010708  T
Q  143 tct 145  Q
    |||    
T  4010707 tct 4010705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 29255741 - 29255603
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||| ||||||||||||  ||||| |||||||||||||||||| || |||  ||||||||| |||||| |||||  || |||||    ||||||      
T  29255741 gagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatctaaaatcattcatctacatc 29255642  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttc 189  Q
          ||| |||||||||||||||||||||||||||||    
T  29255641 tttttcccccttttctttcaatctaaataagtggttttc 29255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 9719691 - 9719613
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcat-tgagga--ggggtggttttaggtcatttttt 126  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||  |||||  ||||| ||||||||||| |||||    
T  9719691 gagagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggggtagttttaggtcaattttt 9719613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 30608811 - 30608666
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||| | ||| | | |||| ||| |||||||||| | |||| |||| || |||||||||||||| ||||||| |||||||||| |||||||      
T  30608811 gagagaaactcaaccttttgtttaaattttttttctccttcatccattaaggatggatggttttaggtcat-ttttgacctagaatcacccctctacata 30608713  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
           || |||||||||||||||||| |||||||||||||| ||||    
T  30608712 tttttctcc-ttttctttcaatctaaattagtggttttcacatatatc 30608666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 9721809 - 9721763
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcat 97  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  9721809 gagagaaactccaacttctctctaaactttctttctcgttcgttcat 9721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 127468 - 127534
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 118  Q
    ||||||||  ||||||||||| ||||| || |||||| ||||||||||||||| ||||||||||||||    
T  127468 gagagaaatcccaacttctctctaaacgttttttctctttcgttcattgagga-gggtggttttaggt 127534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 30493317 - 30493413
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| ||||||||||||||| ||||| |||  ||||||| || |||  || | || || |||||||||| |||||||||||||| ||||||||||    
T  30493317 tttttagtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaaga-gggtggttttcggtcattttttgacctagaatcacc 30493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 32192038 - 32191954
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 128  Q
    ||||||||||||||||||| || || | | |||  |||||||||| ||| |||||  |||||||||||||||||||| ||||||||    
T  32192038 tttttagagagagaaactctaattt-tgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttga 32191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 32327406 - 32327369
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||| |||||||||||||||||||||||||    
T  32327406 ttttctttcaatataaataagtggttttcacatctatc 32327369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 11321658 - 11321626
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacat 193  Q
    |||||||||||||||||||||||||||||||||    
T  11321658 ttttctttcaatctaaataagtggttttcacat 11321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 24228007 - 24227936
Alignment:
Q  55 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||||| |||  || |||| ||||| |||| |||||  |||||| ||||||||||||||||||||    
T  24228007 gaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttt 24227936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 27097924 - 27097834
Alignment:
Q  36 tcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||| ||||||| |||||||||| ||  |||||| |||  |||||||||| |||  ||||| |||| | ||||||||||||| ||||||    
T  27097924 tcttagttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt 27097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 13007010 - 13007165
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  13007010 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccc 13007109  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  13007110 tctacaccttttttcccattttctttcaatctaaataagtggttttcacatctatc 13007165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 6012445 - 6012290
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  6012445 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccc 6012346  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||         || ||||||||||||||||||||||| ||||||| ||||||    
T  6012345 tctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatc 6012290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 38597587 - 38597733
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||||      
T  38597587 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccctctacatc 38597686  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| | |||||||||| |||||||||| ||||||||||||||    
T  38597687 ttttttccc-tattctttcaatttaaataagtgattttcacatctatc 38597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 34945204 - 34945358
Alignment:
Q  44 ttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 143  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||||||||| || || || |||||||||||||||||||||| ||||||||||  |    
T  34945204 ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcaccctt 34945303  T
Q  144 ctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  34945304 ctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatc 34945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 9114022 - 9113877
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||        
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatctt 9113923  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| |||||||| |||||||||||||||||||||||||||||    
T  9113922 ttttcccattttcttttaatctaaataagtggttttcacatctatc 9113877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 26825220 - 26825367
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt--gacttagaatcacctctctacann 150  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||| |||||||      
T  26825220 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatc 26825319  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||||||||||| ||||||    
T  26825320 ttttttccccttttctttcaatctaaataagtggttttcacgtctatc 26825367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 26878377 - 26878236
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| |||| |||||||  ||||||||||||||||||      
T  26878377 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatcacctctctacatc 26878279  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
          ||| |||||||||||||||||||||||||||||||||    
T  26878278 tttttcccccttttctttcaatctaaataagtggttttcacat 26878236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 38007147 - 38007286
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| |||||||      
T  38007147 gagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctctacatc 38007246  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcaca 192  Q
          ||  |||||||||||| |||||||||||||||||||    
T  38007247 tttttccc--ttttctttcaatttaaataagtggttttcaca 38007286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 31392044 - 31391908
Alignment:
Q  63 aacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnnnnnnnccctt 161  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||         ||| |    
T  31392044 aacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctcccct 31391945  T
Q  162 tttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||  |||||||||||||||||||||||||| ||||    
T  31391944 tttcgatcaatctaaataagtggttttcacatttatc 31391908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 7036017 - 7036164
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||| || ||||||   ||||||      
T  7036017 gagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcactcatctacatc 7036116  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  ||||||||||||||||||||||||||||||||| ||||    
T  7036117 ttttttcctcttttctttcaatctaaataagtggttttcacatatatc 7036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 25979951 - 25980094
Alignment:
Q  55 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnn 154  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||| |||  ||||||          
T  25979951 gaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctggaattacccttctacatctttt 25980050  T
Q  155 nnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
      ||| |||  |||||| |||||||||||||||| |||||||||    
T  25980051 ttcccctttgttttcaacctaaataagtggttttaacatctatc 25980094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 8096792 - 8096650
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    ||||| |||||||||||| |||||||| ||||| ||||||| ||||||||||  |||||||||||||| ||||||| |||||||||| |||||           
T  8096792 agaaattccaacttctctctaaactttttttcttcttcgtttattgaggaggattggttttaggtcat-ttttgacctagaatcacccctctatttcttt 8096694  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
       ||| ||||||||||||||||||||||||||||||||| ||||    
T  8096693 tttccc-ttttctttcaatctaaataagtggttttcacatatatc 8096650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 11074199 - 11074052
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggag-gggtggttttaggtcattttttgacttagaatcacctctctacan 149  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||| |||||| |||||||||||||| | |||||||| |||||||| | ||||||      
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggtta-tttttgacctagaatcatcactctacgt 11074101  T
Q  150 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
            || |||||||| ||||||||||||||| |||||||||||||    
T  11074100 ctttttttcccttttcttttaatctaaataagtggctttcacatctatc 11074052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 24230086 - 24229937
Alignment:
Q  51 gagagaaactccaacttctctataaa-ctttctttctccttcgttcattgaggaggggtggttttaggtc-attttttg-acttagaatcacctctctac 147  Q
    ||||||||||||||||||||| |||| |||||||| | |||||||||| |||||| || ||||||||||  |||||||| || || ||||||| ||||||    
T  24230086 gagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggtttattttttgtacctaaaatcacccctctac 24229987  T
Q  148 annnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |        ||||||||||||||||||||||||||| ||||||||||||||    
T  24229986 atattttt-ccctttttctttcaatctaaataagtgattttcacatctatc 24229937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 11977236 - 11977089
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag-gtcattttttgacttagaatcacctctctacan 149  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||  |  |||||| || ||||||||   ||| |||     
T  11977236 gagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttagatttttttttttacctagaatcaaacctcgacat 11977137  T
Q  150 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
           ||| ||||||||||||||||||||||||||||||||| ||||    
T  11977136 cttttttccc-ttttctttcaatctaaataagtggttttcacatatatc 11977089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 6216676 - 6216835
Alignment:
Q  44 ttttagagagagaaactccaa-cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    |||||| ||||||||||| || ||||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||||| |||||| || ||||| |      
T  6216676 ttttagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatcca 6216775  T
Q  143 tctacannnnnnnnccctt----tttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||| |    |||||||||||||||||||||||||||||||| ||||    
T  6216776 tctacatttgttttcccctttgctttctttcaatctaaataagtggttttcacatatatc 6216835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 13421733 - 13421869
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| |||||||||||||| |||| |||| |||| | |  || ||||||||||||||||||| |||||||||| |||||||      
T  13421733 gagagaaacttcaacttctctttaaactttctttcttcttcattca-tgagtatgaatgattttaggtcattttttgacatagaatcacc-ctctacatc 13421830  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttc 189  Q
          ||| |||||||| ||||||||||||||||||||    
T  13421831 tttttcccccttttcttttaatctaaataagtggttttc 13421869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 35850573 - 35850662
Alignment:
Q  50 agagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||| ||||| |||||| |||||||| |||||| |||||| || ||||||||||||||||||||| ||||||||| ||||||||||    
T  35850573 agagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc-ttttttgacctagaatcacc 35850662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 7929988 - 7930073
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||||||||||||| |||||| ||||||||||||||||    |||||  |||||||||| |||||||||| |||||||| ||||||||||    
T  7929988 gagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaatcacc 7930073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 14082655 - 14082581
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||||| |||||||||||| ||||||| |||| ||||||  ||||||||| ||||||||||||||| ||||||||    
T  14082655 ttctctctaaactttctttatccttcgctcatcgaggagaagtggttttatgtcattttttgactttgaatcacc 14082581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 4770927 - 4770992
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 116  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||||||| ||||||    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 39567077 - 39567226
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||| ||  ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| |||||||||  |    
T  39567077 tttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacgcc 39567176  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    ||| ||        |||  |||||||||||||||||||||| |||||||||    
T  39567177 tctgcatctttttcccc-ctttctttcaatctaaataagtgattttcacat 39567226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 4771036 - 4771076
Alignment:
Q  158 cctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  4771036 cctttttctttcaatctaaataagtggttttcacatatatc 4771076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 15571275 - 15571422
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt-gacttagaatcacctctctacan 149  Q
    ||||||||||| |||||||||  || ||||||||||||||| ||||| ||||||   |||||||| |||||||||| ||| |||||||| |  || |||     
T  15571275 gagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttttgacctagaatcatccatcaacat 15571374  T
Q  150 nnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
           | | ||| ||||||||||||||||||||||||||||| ||||    
T  15571375 cttttttctcattt-ctttcaatctaaataagtggttttcacatatatc 15571422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 14211015 - 14211161
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||||   ||||||| |||  |||||| ||| |||  |||| ||||| ||||| |||||||||| |||||||| |||||||||| |    
T  14211015 tttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgagga-gggtgattttaggtcaatttttgacctagaatcacccc 14211113  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    ||| ||        ||   |||||||||||||||||||||| |||||||||    
T  14211114 tctgcatctttttccc---tttctttcaatctaaataagtgattttcacat 14211161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 8985244 - 8985169
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 118  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || || |||||||||| ||||||||    
T  8985244 tttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggt 8985169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 10722604 - 10722705
Alignment:
Q  93 ttcattgaggaggggtggttttaggtca-ttttttgacttagaatca-cctctctacannnnnnnnccctttttctttcaatctaaataagtggttttca 190  Q
    ||||| |||||| ||||||||||||||| ||||||||| |||||||| || |||||||         ||| |||||||||||||||||||||| ||||||    
T  10722604 ttcatcgaggagaggtggttttaggtcatttttttgacctagaatcaccccctctacatctttttt-cctctttctttcaatctaaataagtgtttttca 10722702  T
Q  191 cat 193  Q
    |||    
T  10722703 cat 10722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 10232862 - 10233007
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||        
T  10232862 gagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 10232961  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||||||||||| ||||||    
T  10232962 ttttccccttttctttcaatctaaataagtggttttcacgtctatc 10233007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 6954992 - 6954848
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||         
T  6954992 agaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctctacatcttt 6954893  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
       ||| |||||||||||||||||||||||| |||||||||||||    
T  6954892 tttccccttttctttcaatctaaataagtgggtttcacatctatc 6954848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 47895941 - 47896088
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| |||||||      
T  47895941 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctctacatc 47896040  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          | ||||||||||||||||||||||||||||||||||| ||||    
T  47896041 ttttttctctttttctttcaatctaaataagtggttttcacatatatc 47896088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 9998258 - 9998404
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacctctctacannn 151  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||       
T  9998258 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctctacatct 9998357  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
         ||| ||||||||||||||||||||||||||||||| ||||||    
T  9998358 tttttccccttttctttcaatctaaataagtggttttcacgtctatc 9998404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 21431417 - 21431561
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| |||||||        
T  21431417 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaatcacccctctacatctt 21431515  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  21431516 ttttcccattttctttcaatctaaataagtggttttcacatctatc 21431561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 12050971 - 12050799
Alignment:
Q  27 caatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||| | ||||||||| || |||||||    
T  12050971 caatgattctcttaggtctttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttatttttt 12050872  T
Q  127 gacttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    || ||||||||||| |||||||         |||||||||||| |||||| ||||||||||||||||||||||    
T  12050871 gatttagaatcacccctctacatcttctttcccctttttctttaaatctagataagtggttttcacatctatc 12050799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 45568743 - 45568596
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| | |  ||||||      
T  45568743 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaataatccatctacatc 45568644  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| |||||||||||||||||||||| |||||||||||||||    
T  45568643 ttttttccccttttctttcaatctaaataagttgttttcacatctatc 45568596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 10108030 - 10108173
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||||| |||||||        
T  10108030 gagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca--ttttgacctagaatcacccctctacatctt 10108127  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||||||||||| ||||||    
T  10108128 ttttccccttttctttcaatctaaataagtggttttcacgtctatc 10108173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 40487115 - 40487254
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||   ||||||      
T  40487115 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcactcttctacatc 40487214  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcac 191  Q
          ||| |||||||||||||||||||||||||||||||    
T  40487215 tttttcccc-ttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 52923411 - 52923269
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||||| |||||||         
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtca-tttttgacctagaatcacccctctacatcttt 52923313  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
       ||| ||||||||||||||||||||||||||||||||||||||    
T  52923312 tttccc-ttttctttcaatctaaataagtggttttcacatctatc 52923269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 10229266 - 10229413
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt--gacttagaatcacctctctacann 150  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||| |||||||      
T  10229266 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatc 10229365  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||||||||||| ||||||    
T  10229366 ttttttccccttttctttcaatctaaataagtggttttcacgtctatc 10229413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 9797826 - 9797681
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||| |||||||      
T  9797826 gagagaaactccaacttctctctaaactttatttctccttcgttcatt---gagaggtggttttaggtcattttttgacctagaatcacccctctacatc 9797730  T
Q  151 nnnnnnccct-ttttctttcaatctaaataagtggttttcacatctatc 198  Q
            || ||||||||||||||||||||||||||||||||||||||    
T  9797729 ttttttttctcttttctttcaatctaaataagtggttttcacatctatc 9797681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 32701291 - 32701421
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| | |||||||         
T  32701291 agaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccctctacatcttt 32701390  T
Q  154 nnnccctttttctttcaatctaaataagtgg 184  Q
       | | ||||||||||||||||||||||||    
T  32701391 cttctccttttctttcaatctaaataagtgg 32701421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 48651031 - 48650886
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnnn 152  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||||| ||| |||         
T  48651031 agaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatcacccctcgacatcttt 48650932  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||  ||||||||||||||||||||||    
T  48650931 ttttccccttttctttcaatctgtataagtggttttcacatctatc 48650886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 54148793 - 54148925
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 165  Q
    |||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||||||| |||||||        ||  |||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttc 54148892  T
Q  166 tttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||||||||||||    
T  54148893 tttcaatctaaataagtggttttcacatctatc 54148925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 38545625 - 38545712
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 138  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  38545625 gagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatca 38545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 21534120 - 21533961
Alignment:
Q  38 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 137  Q
    |||| ||||||| ||||||||||| || |||||| |||||||||||||||||||||| || ||||| |||||||||||||||  |||||||| |||||||    
T  21534120 ttagttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatc 21534023  T
Q  138 acctctctacannnnnnnnccct-ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||| |||||||         ||| ||||||| ||||||||||||||||||||||||||||||    
T  21534022 acccctctacatctttttttcctcttttcttccaatctaaataagtggttttcacatctatc 21533961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 36461728 - 36461583
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    |||||||| ||  |||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | ||||| |||||||        
T  36461728 gagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgacctatattcacccctctacatctt 36461629  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||| ||||||||||||||    
T  36461628 ttttccccttttctttcaatctaaataagtgattttcacatctatc 36461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 40556503 - 40556648
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||        
T  40556503 gagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctccacatctt 40556602  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
         || ||||||||  || ||||||||||||||||| |||||||    
T  40556603 tttttcccttttcttttgatataaataagtggttttcatatctatc 40556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 33579658 - 33579805
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||| || || ||||||||||| ||||||||||||| |||||||||| |||||||      
T  33579658 gagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctctacatc 33579757  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatct 199  Q
           || ||||||||||||||||||||||| ||||||||| |||||    
T  33579758 tttttt-ccattttctttcaatctaaataagtgattttcacatatatct 33579805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 47042348 - 47042204
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    |||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||||||         
T  47042348 agaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccctctacatcttt 47042249  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        || |||||||||||| |||||||||| ||||||||| ||||    
T  47042248 ttttcccttttctttcaatttaaataagtgattttcacatatatc 47042204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 7449200 - 7449054
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||  | |||||||      
T  7449200 gagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatc 7449102  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  ||||||||||||||||||||||||||||| ||||||||    
T  7449101 ttttttcctcttttctttcaatctaaataagtggttttcgcatctatc 7449054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 7457342 - 7457196
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||  | |||||||      
T  7457342 gagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatc 7457244  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  ||||||||||||||||||||||||||||| ||||||||    
T  7457243 ttttttcctcttttctttcaatctaaataagtggttttcgcatctatc 7457196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 43488904 - 43488742
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattg--------aggaggggtggttttaggtcattttttgacttaga 134  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| |        ||| ||||||| |||||||| ||||||||| ||||    
T  43488904 tttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-ttttttgacctaga 43488806  T
Q  135 atcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  43488805 atcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatc 43488742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 35865232 - 35865086
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||  || ||||| |  ||||||      
T  35865232 gagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcat-ttttgatctaaaatcatccttctacatc 35865134  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  |||||||||||||||||||||| |||||||||| ||||    
T  35865133 ttttttcctcttttctttcaatctaaataagtagttttcacatatatc 35865086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 26276092 - 26275950
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||| || |||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||| || ||||| | ||| |||      
T  26276092 gagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatcaaccctcgaca-t 26275994  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatc 194  Q
          ||| |||||||||||| |||||||||||||||||||||    
T  26275993 tttttacccattttctttcaatttaaataagtggttttcacatc 26275950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 148
Target Start/End: Complemental strand, 12150089 - 12149984
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||||| || ||||||| |    
T  12150089 tttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccc 12149990  T
Q  143 tctaca 148  Q
    ||||||    
T  12149989 tctaca 12149984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 43016645 - 43016736
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca--ttttttgacttagaatcacc 140  Q
    ||||||||||| ||||||||| |||| |||||||||| ||||||||| ||||| ||||||||||||||||  | ||||||| ||||||||||    
T  43016645 gagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctagaatcacc 43016736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 31272106 - 31272018
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggg-gtggttttaggtcattttttgacttagaatca 138  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||||| |||||||| ||| |||||||| ||||||| || ||||||||    
T  31272106 gagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaatca 31272018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 50194590 - 50194436
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || | ||| ||| |||||||||| |||||||||||| || |||||||||    
T  50194590 tttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatcacctc 50194491  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||| ||        ||| || |||||||||||||||||||| ||| ||||| ||||    
T  50194490 tctgcatcctttttccc-ttctctttcaatctaaataagtgatttccacatatatc 50194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 193
Target Start/End: Original strand, 37040570 - 37040703
Alignment:
Q  49 gagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    |||| |||||||| ||||||| | ||||||||||||||| |||||||||  |||||||||||           |||||||| |||||||||| |||||||    
T  37040570 gagaaagaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtgg-----------tttttgacctagaatcacccctctaca 37040658  T
Q  149 nnnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
            ||| |||||||||||||||||||||||||||||||||    
T  37040659 tcttttttcccattttctttcaatctaaataagtggttttcacat 37040703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 629213 - 629118
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 138  Q
    ||||||| ||||||||||| ||||||||| |||  |||| ||| | |||  |||| |||||||||||||||||||||||| |||||| || |||||    
T  629213 tttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatca 629118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 953706 - 953631
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||||  |||||| |||  |||||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  953706 gagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttt 953631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 36910954 - 36910879
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||||||||||||||||||||| |||||  | ||||||| |||||| ||| ||||| |||| ||||||    
T  36910954 gagagaaactccaacttctctataaactttttttcttttccgttcatcgaggagaggtcgttttgggtcttttttt 36910879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 36910830 - 36910793
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36910830 ttttctttcaatctaaataagtggttttcacatctatc 36910793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 53808169 - 53808096
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 116  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||| |||| ||||||||||| ||||||    
T  53808169 tttttagtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttag 53808096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 46220471 - 46220543
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgagga-ggggtggttttaggtcattttt 125  Q
    |||||||  ||||||||| ||||||||||||||| ||  || |||||||| ||||||||||||||||||||||    
T  46220471 agaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcattttt 46220543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 14859279 - 14859362
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||  |||  | |||||||||||||| ||||||||||||||||    
T  14859279 tttttagcgagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttttt 14859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 20465265 - 20465173
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||||||| |||||||  | |||| |||||||||||||| |||||  || ||||||||||||| |||| |||||||| |||||||||| ||||    
T  20465265 gagagaaacttcaacttccttttaaa-tttctttctccttcattcatcaagtaggggtggttttatgtca-tttttgacatagaatcacccctct 20465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 21290126 - 21290024
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||||||||   ||||||| |||  |||||| ||| |||  |||| |||||| |||| |||||||||| |||||||| |||||||||| |    
T  21290126 tttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcacccc 21290027  T
Q  143 tct 145  Q
    |||    
T  21290026 tct 21290024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 4821624 - 4821685
Alignment:
Q  78 tttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    |||||||||| ||| ||| | ||| ||||||||||||||||||||||||||| || ||||||    
T  4821624 tttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcac 4821685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 1649320 - 1649356
Alignment:
Q  162 tttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||||||||||| ||||    
T  1649320 tttctttcaatctaaataagtggttttcacatatatc 1649356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 29921834 - 29921989
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtgg-ttttaggtcattttttgacttagaatcacct 141  Q
    |||||||  ||||| |||| | ||||||| |||  |||||||||| ||| ||| | |||||||||||| ||||||||||||||||||  || |||||| |    
T  29921834 tttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcactt 29921933  T
Q  142 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||| ||        |||  |||||||||||||||||||||| ||| ||||| ||||    
T  29921934 ctctccatcttttttccc-ctttctttcaatctaaataagtgatttccacatatatc 29921989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 29970987 - 29971142
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtgg-ttttaggtcattttttgacttagaatcacct 141  Q
    |||||||  ||||| |||| | ||||||| |||  |||||||||| ||| ||| | |||||||||||| ||||||||||||||||||  || |||||| |    
T  29970987 tttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcactt 29971086  T
Q  142 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||| ||        |||  |||||||||||||||||||||| ||| ||||| ||||    
T  29971087 ctctccatcttttttccc-ctttctttcaatctaaataagtgatttccacatatatc 29971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 9319845 - 9319993
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||| ||||||||| |||| ||||     ||||||||||| ||||||| |||||||||| | |||||| ||| || ||||||| |    
T  9319845 tttttagtgggagaaactctaacttctctctaaattttc-----ccttcgttcatcgaggaggagtggttttagattattttt-gacatataatcacc-c 9319937  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||         ||  ||| |||||||| ||||||||||||||||||||||||    
T  9319938 tctacatctttttttcccctttttttcaatcaaaataagtggttttcacatctatc 9319993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 20609170 - 20609099
Alignment:
Q  77 ctttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    ||||||||||||||| ||| | ||||||||||| ||||| || |||||||||| || ||||| | |||||||    
T  20609170 ctttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctctaca 20609099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 23800195 - 23800061
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggagggg--tggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttt 163  Q
    |||||| |||| ||| |||||||||| ||||| || ||||||  ||||||||||| |||||||||| || ||| ||   ||||||        ||  |||    
T  23800195 ttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaattactcttctacatcttttttcctcttt 23800096  T
Q  164 tctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||||||||||||| |||| ||||    
T  23800095 tctttcaatctaaataagtggtttttacatatatc 23800061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 29249025 - 29249128
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttt-taggtcattttttgacttagaatcacct 141  Q
    ||||||| ||||||||||| ||||||||| |||  ||||||||||||||  |||| ||| || | || |||  |||||| |||||||| ||||||||| |    
T  29249025 tttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcactt 29249124  T
Q  142 ctct 145  Q
    ||||    
T  29249125 ctct 29249128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 38860310 - 38860271
Alignment:
Q  159 ctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  38860310 ctttttctttcaattcaaataagtggttttcacatctatc 38860271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 7546400 - 7546494
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||||| || | ||||||| |||  ||||||||||  ||  |||| ||||||||||| |||||||||| |||||||  |||||||||| ||||    
T  7546400 gagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctct 7546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 20988062 - 20988020
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttc 85  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  20988062 tttttagtgagagaaactccaacttctctctaaacttcctttc 20988020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 20609079 - 20609042
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  20609079 ttttctttcaatctaaataagtggttttaacatatatc 20609042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 51486939 - 51486987
Alignment:
Q  98 tgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 146  Q
    |||||||||||| |||||||||| |||||||| |||| ||| |||||||    
T  51486939 tgaggaggggtgattttaggtcaatttttgacgtagagtcatctctcta 51486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 53508117 - 53508157
Alignment:
Q  158 cctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||| |||||||||| ||||||||| ||||    
T  53508117 cctttttctttcaatataaataagtgattttcacatatatc 53508157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 7e-45; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 4778545 - 4778700
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  4778545 tttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 4778644  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||         || |||||||||||| |||||||||||||||||||||||||    
T  4778645 tctacatctttttttcccttttctttcaatttaaataagtggttttcacatctatc 4778700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 7646274 - 7646418
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca-nnn 151  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||        
T  7646274 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 7646373  T
Q  152 nnnnnccctttttctttcaatctaaataagtggttttcacatcta 196  Q
         ||| ||||||||| ||||||||||||||||||||||||||    
T  7646374 tttttccccttttctttcgatctaaataagtggttttcacatcta 7646418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 7448050 - 7448194
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||||        
T  7448050 gagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctctacatctt 7448149  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| |||||||||||||||||||| |||||||||||||||||    
T  7448150 tttcccc-ttttctttcaatctaaataaatggttttcacatctatc 7448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 43397418 - 43397273
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||      
T  43397418 gagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacctctctacatc 43397319  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  ||||||||||||||||||||||||||||||||| ||||    
T  43397318 tttttccc--ttttctttcaatctaaataagtggttttcacatatatc 43397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 4098895 - 4099050
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||| ||| ||||| ||||| |||||| |||||||||||||||||| ||||||||||      
T  4098895 tttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcaccca 4098994  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||        ||| ||||||||||||||||||||||||||||||||||||||    
T  4098995 tctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatc 4099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 31788256 - 31788403
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||      
T  31788256 gagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctctacatc 31788355  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||| ||||||||||||||    
T  31788356 ttttttcccattttctttcaatctaaataagtgattttcacatctatc 31788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 36943423 - 36943276
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||||||| || ||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  36943423 gagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatc 36943324  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  |||||||||||||||||||||| |||||||||||||||    
T  36943323 ttttttcctcttttctttcaatctaaataagtagttttcacatctatc 36943276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 5428188 - 5428020
Alignment:
Q  30 tgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 129  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  5428188 tgattctcttaggtctttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgac 5428089  T
Q  130 ttagaatcacctctctaca-nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
     |||| ||| |  ||||||         ||||||||||||||||||||||||||  ||||||||||||||    
T  5428088 ctagagtcatcgttctacatcttttttcccctttttctttcaatctaaataagt-tttttcacatctatc 5428020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 9169554 - 9169410
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||| |||||||||| |||||||        
T  9169554 gagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctacatttt 9169456  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
         || ||||||||||||||||||||||||||||||||||||||    
T  9169455 tttttcccttttctttcaatctaaataagtggttttcacatctatc 9169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 37876899 - 37876750
Alignment:
Q  49 gagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||  | ||||    
T  37876899 gagagggaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtaca 37876800  T
Q  149 nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
            |||||||||||| |||||||||||||||||||||||||||||    
T  37876799 tctttttcccctttttcttttaatctaaataagtggttttcacatctatc 37876750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 1421456 - 1421622
Alignment:
Q  36 tcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttaga 134  Q
    |||||| ||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||    
T  1421456 tcttagttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatataga 1421555  T
Q  135 atcacctctctaca---nnnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||| |||||||           ||| ||||||||||||||||||||||||||||||||||||||    
T  1421556 atcacccctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacatctatc 1421622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 18763268 - 18763409
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||| ||||| | ||| |||||| |||||||||| ||||||||||||| |||||||||| |||||||      
T  18763268 gagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctacatc 18763367  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
          ||| |||||||||||||||||||||||||||||||||    
T  18763368 ttttttccc-ttttctttcaatctaaataagtggttttcacat 18763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 7678177 - 7678080
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  7678177 gagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctctaca 7678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 27097701 - 27097615
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  27097701 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcacc 27097615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 12677595 - 12677498
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |||| ||||||||||||||| |||||||||| |||||||    
T  12677595 gagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcacccctctaca 12677498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 38444982 - 38445113
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 165  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||  |||||||||| |||||||        |||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctacatcttttttccctttttc 38445080  T
Q  166 tttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||| |||||||||||||||||||||||||    
T  38445081 tttcaatataaataagtggttttcacatctatc 38445113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 11985529 - 11985383
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||| | |||||| |||||||||| |||||||||| || |||||||||| |||||||      
T  11985529 gagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctctacaac 11985430  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| |||||||||||| |||||||||||||||||||| ||||    
T  11985429 tttttcccc-ttttctttcaatttaaataagtggttttcacatatatc 11985383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 4904443 - 4904298
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    |||||||  ||||||||| |||||||||| ||||||||||||||| |||||| ||||| ||| |||||||||| ||||||||||||| || ||||||| |    
T  4904443 tttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcaccac 4904344  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    | ||||          |||||| |||||||||||||||||||||||||||| ||||    
T  4904343 tttacat---------cttttt-tttcaatctaaataagtggttttcacatatatc 4904298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 12648223 - 12648077
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| |||  |||||||||| ||   || ||||||||||||||||||||||||||||||||| |||||||||| ||| |||      
T  12648223 gagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaatcacccctccacatc 12648124  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          | | ||||||||||||||||||||||| ||| ||||| ||||    
T  12648123 ttttttctc-ttttctttcaatctaaataagtgatttccacatatatc 12648077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 31129060 - 31128974
Alignment:
Q  38 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 124  Q
    |||| ||||||| |||| ||||| |||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  31129060 ttagttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 35220131 - 35220222
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  35220131 gagagaaactccaacctctctctaaactttctttctccttcattcat---cgaggggtggttttaggttattttttgacctagaatcacccctct 35220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 17995012 - 17994874
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnn 153  Q
    ||||||| || ||||||| ||||||||||||||| |||| || | || ||| |||||||||||||||||||||| | || |||||||||||| ||         
T  17995012 agaaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaatcacctctctgcatcttt 17994913  T
Q  154 nnnccctttttctttcaatctaaataagtggttttcaca 192  Q
       ||  |||||||||||||| |||||||||||||||||    
T  17994912 tttcctattttctttcaatcttaataagtggttttcaca 17994874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 18108034 - 18107943
Alignment:
Q  52 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 143  Q
    ||||||| ||||  |||||| |||  |||||||||| ||| |||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  18108034 agagaaagtccactttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctct 18107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 19062609 - 19062505
Alignment:
Q  92 gttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcac 191  Q
    |||||| |||||||| ||||||||||| |||||||||  |||||||||| |||||||        ||||||| |||||||||||||||||||||||||||    
T  19062609 gttcatcgaggaggg-tggttttaggttattttttgaactagaatcacccctctacatcctttttccctttt-ctttcaatctaaataagtggttttcac 19062512  T
Q  192 atctatc 198  Q
    |||||||    
T  19062511 atctatc 19062505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 24461243 - 24461327
Alignment:
Q  55 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    ||||||||||||||||| |||  |||  ||||| |||  ||||| |||||||||||||||||||||||||||||| |||||||||    
T  24461243 gaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcac 24461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 29279869 - 29279723
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||||||||||||| ||| |||||||||| |||| ||||| ||||| | | | |||||||||||||||||  | | |||| |  |||||||      
T  29279869 gagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttttgggtaaaaatcgctcctctacatc 29279771  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||  ||||||||||||||||||||||||||||||||| ||||    
T  29279770 ttttttcctcttttctttcaatctaaataagtggttttcacatatatc 29279723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 32448928 - 32448826
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||| ||||||||| |||| |||  || || |||  |||| |||||||||||||||||||||||| |||||| || ||||||| |    
T  32448928 tttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcacccc 32448829  T
Q  143 tct 145  Q
    |||    
T  32448828 tct 32448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 193
Target Start/End: Original strand, 8809084 - 8809223
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||| ||||||||| ||||||||||||||||||| | | | |||||  ||||||||||| ||| |||||||| || ||||||| |||||||        
T  8809084 gagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatca-tttttgacctaaaatcacccctctacatctt 8809182  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
        ||  ||||||||||||| |||||||||| || |||||    
T  8809183 ttttcctcttttctttcaatcaaaataagtggcttgcacat 8809223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 36691666 - 36691732
Alignment:
Q  51 gagagaaactccaactt-ctctataaactttctttctccttcgttcattgaggaggggtggttttag 116  Q
    ||||||||||||||||| || | ||||| ||||||||||||| || |||||||||||||||||||||    
T  36691666 gagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 4041783 - 4041747
Alignment:
Q  162 tttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||||||||||||||||||||||||||||||||||    
T  4041783 tttctttcaatctaaataagtggttttcacatctatc 4041747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 7678061 - 7678025
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctat 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  7678061 ttttctttcaatctaaataagtggttttcacatctat 7678025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 42698982 - 42698922
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgagga 103  Q
    ||||||| |||||||||| |||||||| | ||||||||||||||||||  |||||||||||    
T  42698982 tttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcattgagga 42698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 29574938 - 29574843
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| ||||||||||| ||||||| ||  |  ||| |||||| |||  || | |||||||||||||||||| |||||||||||| ||||||||||    
T  29574938 tttttagtgagagaaactctaacttcttta--agttttatttctctttcactcgtcgaggaggggtggttttagatcattttttgacctagaatcacc 29574843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 31128969 - 31128932
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31128969 ttttctttcaatctaaataagtggttttcacatatatc 31128932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 37994084 - 37994168
Alignment:
Q  60 tccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||||||||| ||   |||||||||| |||  |||| ||||| |||||||||||||||| |||||||| |||||||||| ||||    
T  37994084 tccaacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtca-tttttgacctagaatcacccctct 37994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 37416488 - 37416576
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 125  Q
    ||||| ||||||  |||||||||| |||||||||| |||| ||| ||| || ||| ||| | || |||||||| |||||||||||||||    
T  37416488 cttagttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt 37416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 41694406 - 41694502
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 138  Q
    ||||||||  ||||||||| || ||||||| ||| |||||| ||||||||  |||| ||| ||  || ||||||||||||||||||| ||| |||||    
T  41694406 gtttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgatttaaaatca 41694502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 4042276 - 4042229
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcatt 98  Q
    ||||||||||||||||||||| |||||||| |||||| ||| ||||||    
T  4042276 gagagaaactccaacttctctctaaactttttttctcattccttcatt 4042229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 6436459 - 6436502
Alignment:
Q  102 gaggggtggttttaggtcattttttgacttagaatcacctctct 145  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||    
T  6436459 gaggggtgattttaggtcattttttgacatagaatcacccctct 6436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 25509342 - 25509291
Alignment:
Q  75 aactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||| |||||||||| |||||  |||||||||||||| ||||||    
T  25509342 aactttctttcttcttcgttcatcgaggaatggtggttttaggtcttttttt 25509291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 28718245 - 28718160
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 138  Q
    |||||||||||||||| |||| |||  ||||||| || ||   |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  28718245 gagagaaactccaact-ctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcat-ttttgacatagaatca 28718160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 39311145 - 39311059
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||| |||||  || ||| |||||||||| |||| ||||| ||| | || || ||||||||||||||||||| ||||||||||    
T  39311145 gagaaactcgaactttgctctaagctttctttcttcttcattcatcgagaatgg-tgattttaggtcattttttgacctagaatcacc 39311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 11833394 - 11833432
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatct 199  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  11833394 ttttctttcaatttaaataagtggttttcacatatatct 11833432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 28872074 - 28871987
Alignment:
Q  37 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    ||||| ||||||| |||||||||||||  |||||| |||  ||| |||||| ||| ||||| ||||| | ||||||||||||| ||||||    
T  28872074 cttagttttttagtgagagaaactccacattctctctaa--tttttttctcattcattcatcgaggatgagtggttttaggtcttttttt 28871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 3308787 - 3308828
Alignment:
Q  99 gaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  3308787 gaggaggggtgattttaggtcaatttttgacctagaatcacc 3308828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 8809003 - 8809036
Alignment:
Q  51 gagagaaactccaacttctctataaactttcttt 84  Q
    ||||||||||||||||||||| ||||||||||||    
T  8809003 gagagaaactccaacttctctctaaactttcttt 8809036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 11833338 - 11833371
Alignment:
Q  105 gggtggttttaggtcattttttgacttagaatca 138  Q
    |||||||||||||||||||||||||||| |||||    
T  11833338 gggtggttttaggtcattttttgacttaaaatca 11833371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 13120022 - 13120083
Alignment:
Q  65 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||||||||||||| ||||||| |||| ||||| || || |||||||||||| || ||||||    
T  13120022 cttctctataaactctctttcttcttcattcatcgaagaagggtggttttagatcttttttt 13120083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 20146011 - 20145914
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 140  Q
    ||||||| |||||||||| ||  |||||| |||  | ||||||| ||||  ||||  ||||||||  |||||||||||||| ||||| ||||||||||    
T  20146011 tttttagtgagagaaacttcacattctctttaagttatctttcttcttcactcatcaaggaggggcagttttaggtcatttattgacatagaatcacc 20145914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 30400307 - 30400250
Alignment:
Q  82 tttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    |||||||||| ||||| ||| || ||||||||||| |||||||||||| || ||||||    
T  30400307 tttctccttcattcatcgagaagaggtggttttagatcattttttgacctaaaatcac 30400250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 187
Target Start/End: Original strand, 36691781 - 36691810
Alignment:
Q  158 cctttttctttcaatctaaataagtggttt 187  Q
    ||||||||||||||||||||||||||||||    
T  36691781 cctttttctttcaatctaaataagtggttt 36691810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 29173909 - 29173877
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  29173909 ttttctttcaatccaaataagtggttttcacat 29173877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 50578 - 50723
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| | |||||||        
T  50578 gagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctctacatctt 50677  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||||||||||||||||||||||||||||    
T  50678 ttttccccttttctttcaatctaaataagtggttttcacatctatc 50723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 198
Target Start/End: Complemental strand, 33047 - 32900
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||| |||||||||| |||||||      
T  33047 gagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctctacatc 32948  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
          ||| ||||||||||||||||||||||||||||||||||||||    
T  32947 ttttgtccccttttctttcaatctaaataagtggttttcacatctatc 32900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 72161 - 72016
Alignment:
Q  53 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnn 152  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||| ||        
T  72161 gagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccattcttcatctt 72062  T
Q  153 nnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
        ||| ||||||||||||| ||||||||||||||||||||||||    
T  72061 tttcccccttttctttcaatccaaataagtggttttcacatctatc 72016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 195
Target Start/End: Original strand, 15282 - 15425
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| |||||||      
T  15282 gagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 15381  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttcacatct 195  Q
          ||| |||||||||||||||||||||||||||||| ||||    
T  15382 tttttcccc-ttttctttcaatctaaataagtggttttcatatct 15425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 198
Target Start/End: Original strand, 1126 - 1280
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||| |||||| |||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  1126 tttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccc 1225  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    |||||         ||| |||||||||| |||||||||||||||||||||| ||||    
T  1226 tctacttcttttttccc-ttttctttcactctaaataagtggttttcacatatatc 1280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 15137 - 14998
Alignment:
Q  51 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacann 150  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||| | ||||  |||||| |||||||||| |||||||||| |||||||      
T  15137 gagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactctacatc 15038  T
Q  151 nnnnnnccctttttctttcaatctaaataagtggttttca 190  Q
          |||||||||||||||||||||||||| |||||||    
T  15037 ttttttccctttttctttcaatctaaataagtcgttttca 14998  T

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Target: scaffold0634 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 8296 - 8401
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||||| || ||||||| |    
T  8296 tttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccc 8395  T
Q  143 tctaca 148  Q
    ||||||    
T  8396 tctaca 8401  T

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Target: scaffold0009 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 58386 - 58232
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 142  Q
    ||||||| ||||||||||||||||||||| |||  |||| || || |||  || | ||||||||||||||||||||||||||||||| || ||||||| |    
T  58386 tttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccc 58287  T
Q  143 tctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||| ||         || ||||||||||||||||||||||| ||| ||||| ||||    
T  58286 tctgcatccttttttcc-ttttctttcaatctaaataagtgatttccacatatatc 58232  T

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Target: scaffold0087 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 25597 - 25531
Alignment:
Q  82 tttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 148  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||| |||||||    
T  25597 tttctccttcgttcatcgaggaggggtggttttatgtcattttttgacctataatcacccctctaca 25531  T

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Target: scaffold0603 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 198
Target Start/End: Original strand, 7499 - 7652
Alignment:
Q  42 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacct 141  Q
    |||||||| ||| ||||||||  ||||||| |||  |||||||||||||  ||||| |||||||| |||||||||||||||||||||| |||||||||      
T  7499 gtttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactc 7597  T
Q  142 ctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
     ||| ||        ||||||  |||||||| |||||||||||||||||||| ||||    
T  7598 atctgcatcttttaccccttt--ctttcaatttaaataagtggttttcacatatatc 7652  T

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Target: scaffold0554 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 10672 - 10742
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 124  Q
    |||||||| ||||||||| ||||||| ||| ||||||| ||||| |||||| |||||||||||||||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtcatttt 10742  T

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Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 2121 - 2041
Alignment:
Q  46 ttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 126  Q
    |||| ||||||||||||||||||| |  ||||||||||||| |||| ||||||||||||  ||| ||||||||| ||||||    
T  2121 ttagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtcttttttt 2041  T

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Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 25124 - 25209
Alignment:
Q  52 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 139  Q
    ||||||||| |||||| ||| ||||||||||||||| ||| ||||| |  |||||||||||||| |||| ||||||||||| ||||||    
T  25124 agagaaacttcaacttttctctaaactttctttctctttcattcatcg--gaggggtggttttaagtcactttttgacttaaaatcac 25209  T

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Target: scaffold0492 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 12721 - 12847
Alignment:
Q  66 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttc 165  Q
    |||||| | ||||||||||||| ||  |||||  ||||| |||||||||||||||||||||||| |||||||||| || ||||         || |||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctcc-ttttc 12819  T
Q  166 tttcaatctaaataagtggttttcacat 193  Q
    | ||||| ||||||||||||||||||||    
T  12820 tatcaatttaaataagtggttttcacat 12847  T

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Target: scaffold0121 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 31565 - 31422
Alignment:
Q  56 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctacannnnnn 154  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||| ||| ||| ||||| |||||| |||| ||  | ||||||  |||||||          
T  31565 aaactccaacttttctttaaactttctttctccttcgttcatcgagcaggagtgattttatgtcattgtttttaccaaaaatcactcctctacatctttt 31466  T
Q  155 nnccctttttctttcaatctaaataagtggttttcacatctatc 198  Q
      ||  |||||||||||| ||||||||| |||||||||| ||||    
T  31465 ttcctcttttctttcaatataaataagtagttttcacatatatc 31422  T

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Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 19342 - 19261
Alignment:
Q  43 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 125  Q
    ||||||| ||||||||||||||||||||| | || |||||||||| |||  |||| ||||||||||||||||| ||| |||||    
T  19342 tttttagtgagagaaactccaacttctctct-aattttctttctctttcactcatcgaggaggggtggttttatgtcgttttt 19261  T

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Target: scaffold0888 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 1925 - 1832
Alignment:
Q  99 gaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagtggttttcacat 193  Q
    ||||||||||| | |||||||| |||||||| ||||||||||||||| ||        |||  |||||||||||||||||||||| |||||||||    
T  1925 gaggaggggtgatattaggtcaatttttgacctagaatcacctctctgcatcttttttccc-ctttctttcaatctaaataagtgattttcacat 1832  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 71549 - 71437
Alignment:
Q  83 ttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctacannnnnnnnccctttttctttcaatctaaataagt 182  Q
    ||||||||| ||||  ||| ||||||||||||||||||||||| ||| || ||||||| |||||||        ||  ||||||||||||||||| ||||    
T  71549 ttctccttcattcacagagaaggggtggttttaggtcattttt-gacctaaaatcacccctctacatatttt--cctcttttctttcaatctaaacaagt 71453  T
Q  183 ggttttcacatctatc 198  Q
    ||||||||||| ||||    
T  71452 ggttttcacatatatc 71437  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 10333 - 10264
Alignment:
Q  54 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 125  Q
    |||||||  ||||||||| |||||||| |||||||||||||||||||||| || || ||||| |||||||||    
T  10333 agaaactttaacttctct-taaacttt-tttctccttcgttcattgaggatggatgattttatgtcattttt 10264  T

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Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 193
Target Start/End: Original strand, 37947 - 37978
Alignment:
Q  162 tttctttcaatctaaataagtggttttcacat 193  Q
    ||||||||||||||||||||||||||||||||    
T  37947 tttctttcaatctaaataagtggttttcacat 37978  T

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Target: scaffold0136; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 10230 - 10193
Alignment:
Q  161 ttttctttcaatctaaataagtggttttcacatctatc 198  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  10230 ttttctttccatctaaataagtggttttcacatatatc 10193  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 92939 - 92977
Alignment:
Q  100 aggaggggtggttttaggtcattttttgacttagaatca 138  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  92939 aggaggggtggttttaggttattttttgacctagaatca 92977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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