View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5834_high_16 (Length: 250)
Name: NF5834_high_16
Description: NF5834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5834_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5273479 - 5273720
Alignment:
| Q |
1 |
aaaaagaatattttatttgagaggaatattacgtaacataccataacttataatccttgtcgtatttttaaataaattaaatatccaccgttggatcggt |
100 |
Q |
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| T |
5273479 |
aaaaagaatattttatttgagaggaatattacgtaacataccataacttataatcctcgtcgtattttaaaataaattaaatatccaccgttggatcagt |
5273578 |
T |
|
| Q |
101 |
ttgaatttaggttatttagaagatcggagtgtgtgggatggttagggcatgagaagaataaggaggattgatgacgaggattatgagtgtgaaatgcaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5273579 |
ttgaatttaggttatttagaagatcggagtgtgtgggatggttagggcatgagaagaataaggaggattgatgacgaggattatgagtgtgaaatgcaca |
5273678 |
T |
|
| Q |
201 |
tctccaccactaaatgcatttgcagcccataagcatattctt |
242 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
5273679 |
tctccaccactaaatgcatttgcagcccataagcatattctt |
5273720 |
T |
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