View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5837-Insertion-6 (Length: 328)
Name: NF5837-Insertion-6
Description: NF5837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5837-Insertion-6 |
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Alignment Details
Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 2708067 - 2708376
Alignment:
| Q |
8 |
aattggataacaagagaaaaattccacacatggatattcttggtgattagactctgagcaaggtactctcagatttcatcactctaatcaactatttatt |
107 |
Q |
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| T |
2708067 |
aattggataacaagagaaaaattccacacatggatattcttggtgattagactctgagcaaggtactctcagatttcatcactctaatcaactatttatt |
2708166 |
T |
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| Q |
108 |
gttcatcaattcattttctctttaaagattacaaatgaaatttcaatggtgtgattcaacgtgagttttgatcaattgttcataaaatcataactaatag |
207 |
Q |
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| T |
2708167 |
gttcatcaattcattttctctttaaagattacaaatgaaatttcaatggtgtgattcaacgtgagttttgatcaattgt--------tcataactaatag |
2708258 |
T |
|
| Q |
208 |
acataataaccagctagctaactaacaccctatagaaacagttatctatcccaactgactcaacatgacataattcagttaaagtaatcatgttgactga |
307 |
Q |
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||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2708259 |
acatagtaaccagctagctaactaacaccctttagaaacagttatctatcccaactgactcaacatgacataattcagttaaagtaatcatgttgactga |
2708358 |
T |
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| Q |
308 |
accattatagcacacatc |
325 |
Q |
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|||||||||||||||||| |
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| T |
2708359 |
accattatagcacacatc |
2708376 |
T |
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