View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5837_low_3 (Length: 498)

Name: NF5837_low_3
Description: NF5837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5837_low_3
NF5837_low_3
[»] chr3 (39 HSPs)
chr3 (2-483)||(43945563-43946045)
chr3 (5-75)||(42671879-42671949)
chr3 (1-77)||(47069844-47069920)
chr3 (1-60)||(54898090-54898149)
chr3 (5-60)||(19550433-19550488)
chr3 (2-69)||(29698175-29698242)
chr3 (1-60)||(41168941-41169000)
chr3 (1-75)||(34266429-34266503)
chr3 (6-76)||(43554577-43554647)
chr3 (5-75)||(54106450-54106520)
chr3 (1-78)||(7329007-7329084)
chr3 (1-78)||(53745268-53745345)
chr3 (1-60)||(24981473-24981532)
chr3 (6-60)||(13168193-13168247)
chr3 (2-75)||(29803832-29803905)
chr3 (1-77)||(6902461-6902537)
chr3 (1-69)||(52663625-52663693)
chr3 (1-60)||(27992423-27992482)
chr3 (12-75)||(45101347-45101410)
chr3 (2-69)||(51244808-51244875)
chr3 (2-53)||(51697574-51697625)
chr3 (1-75)||(13158428-13158502)
chr3 (1-75)||(29651851-29651925)
chr3 (14-76)||(33074266-33074328)
chr3 (21-75)||(33491128-33491182)
chr3 (11-77)||(51219080-51219146)
chr3 (1-50)||(790733-790782)
chr3 (14-79)||(29458188-29458253)
chr3 (8-60)||(32980830-32980882)
chr3 (1-77)||(35315315-35315391)
chr3 (1-60)||(27483792-27483851)
chr3 (1-68)||(46973606-46973673)
chr3 (14-52)||(3376316-3376354)
chr3 (1-75)||(32853349-32853423)
chr3 (14-76)||(40318916-40318978)
chr3 (3-60)||(36234549-36234606)
chr3 (14-75)||(41425825-41425886)
chr3 (34-75)||(52627227-52627268)
chr3 (8-60)||(39866853-39866905)
[»] chr6 (21 HSPs)
chr6 (1-76)||(1252349-1252424)
chr6 (1-75)||(17193341-17193415)
chr6 (1-60)||(3621773-3621832)
chr6 (1-60)||(17123984-17124043)
chr6 (6-76)||(364525-364595)
chr6 (1-59)||(373906-373964)
chr6 (1-75)||(3850503-3850577)
chr6 (1-60)||(23923712-23923771)
chr6 (5-60)||(24663566-24663621)
chr6 (1-75)||(1751415-1751489)
chr6 (1-75)||(22050231-22050305)
chr6 (2-75)||(30388950-30389023)
chr6 (1-69)||(53814-53882)
chr6 (1-60)||(26470722-26470781)
chr6 (1-60)||(12732358-12732417)
chr6 (14-65)||(17601127-17601178)
chr6 (1-60)||(17836076-17836135)
chr6 (14-60)||(1249735-1249781)
chr6 (14-60)||(19645721-19645767)
chr6 (1-75)||(30416059-30416133)
chr6 (1-77)||(26485667-26485743)
[»] chr4 (44 HSPs)
chr4 (1-75)||(22678293-22678367)
chr4 (1-75)||(44069217-44069291)
chr4 (2-79)||(16464762-16464839)
chr4 (3-75)||(33755015-33755087)
chr4 (1-75)||(9834466-9834540)
chr4 (1-75)||(44217892-44217966)
chr4 (1-69)||(5374340-5374408)
chr4 (1-69)||(35231876-35231944)
chr4 (2-77)||(13629175-13629250)
chr4 (1-68)||(48782385-48782452)
chr4 (1-75)||(8735575-8735649)
chr4 (3-60)||(35232297-35232354)
chr4 (2-75)||(44013897-44013970)
chr4 (1-53)||(46872107-46872159)
chr4 (1-76)||(56576087-56576162)
chr4 (2-80)||(21044727-21044804)
chr4 (1-75)||(39683698-39683772)
chr4 (5-75)||(53599770-53599840)
chr4 (1-78)||(22828382-22828459)
chr4 (14-75)||(33751327-33751388)
chr4 (5-77)||(12252282-12252354)
chr4 (1-53)||(16664427-16664479)
chr4 (1-77)||(50623599-50623674)
chr4 (1-60)||(3436066-3436125)
chr4 (1-60)||(19527219-19527278)
chr4 (5-68)||(26906380-26906443)
chr4 (1-60)||(36408909-36408968)
chr4 (1-60)||(36423075-36423134)
chr4 (1-75)||(26620335-26620409)
chr4 (5-75)||(39671515-39671585)
chr4 (8-74)||(55703113-55703179)
chr4 (1-77)||(38617291-38617365)
chr4 (1-69)||(19093143-19093211)
chr4 (1-65)||(29295540-29295604)
chr4 (1-76)||(42513008-42513084)
chr4 (1-60)||(23237816-23237875)
chr4 (14-69)||(52257781-52257836)
chr4 (1-60)||(52677165-52677224)
chr4 (21-75)||(354172-354226)
chr4 (21-75)||(29511249-29511303)
chr4 (1-79)||(31861966-31862044)
chr4 (1-75)||(42099894-42099968)
chr4 (1-53)||(37502208-37502260)
chr4 (8-60)||(42645454-42645506)
[»] chr8 (35 HSPs)
chr8 (1-75)||(13328153-13328227)
chr8 (1-75)||(14228305-14228379)
chr8 (1-76)||(38128529-38128604)
chr8 (2-75)||(35052237-35052310)
chr8 (1-76)||(38482774-38482849)
chr8 (5-75)||(14263731-14263801)
chr8 (2-68)||(16656884-16656950)
chr8 (1-60)||(4057471-4057530)
chr8 (1-76)||(25703560-25703635)
chr8 (1-76)||(25812731-25812806)
chr8 (1-60)||(33935058-33935117)
chr8 (1-75)||(8453219-8453293)
chr8 (2-60)||(40228479-40228537)
chr8 (1-77)||(39303496-39303573)
chr8 (8-80)||(15596534-15596606)
chr8 (5-60)||(9954836-9954891)
chr8 (1-60)||(11994064-11994123)
chr8 (21-76)||(21651728-21651783)
chr8 (1-60)||(23848554-23848613)
chr8 (1-60)||(26062890-26062949)
chr8 (1-76)||(41308079-41308154)
chr8 (1-60)||(43641987-43642046)
chr8 (1-76)||(45281360-45281435)
chr8 (2-60)||(1202442-1202500)
chr8 (2-60)||(34047035-34047093)
chr8 (1-75)||(34982012-34982086)
chr8 (14-78)||(2888448-2888512)
chr8 (9-69)||(11707443-11707503)
chr8 (1-60)||(1245495-1245554)
chr8 (1-60)||(23430092-23430151)
chr8 (14-76)||(3720876-3720938)
chr8 (14-80)||(14061127-14061193)
chr8 (33-77)||(18291678-18291722)
chr8 (27-75)||(36058441-36058489)
chr8 (17-65)||(39615446-39615494)
[»] chr1 (36 HSPs)
chr1 (1-75)||(12231051-12231125)
chr1 (1-78)||(35531272-35531349)
chr1 (3-75)||(37609284-37609356)
chr1 (1-60)||(8464252-8464311)
chr1 (1-60)||(45226572-45226631)
chr1 (1-75)||(13566862-13566936)
chr1 (1-75)||(43500689-43500763)
chr1 (1-78)||(20605601-20605678)
chr1 (2-75)||(38648641-38648714)
chr1 (1-60)||(7783133-7783192)
chr1 (1-60)||(49908174-49908233)
chr1 (5-78)||(29830940-29831013)
chr1 (1-77)||(30686594-30686670)
chr1 (1-60)||(19349374-19349433)
chr1 (1-60)||(28679204-28679263)
chr1 (1-76)||(40926732-40926807)
chr1 (1-75)||(1024739-1024813)
chr1 (1-75)||(13507953-13508027)
chr1 (1-75)||(13515141-13515215)
chr1 (1-60)||(21927693-21927750)
chr1 (1-60)||(1429467-1429526)
chr1 (1-60)||(1677381-1677440)
chr1 (1-60)||(45368271-45368330)
chr1 (26-77)||(48508341-48508392)
chr1 (5-60)||(49497339-49497394)
chr1 (5-75)||(35483761-35483831)
chr1 (8-60)||(35255676-35255728)
chr1 (4-60)||(37437048-37437104)
chr1 (21-77)||(48264754-48264810)
chr1 (14-69)||(31487765-31487820)
chr1 (12-75)||(50825553-50825616)
chr1 (21-79)||(13699377-13699435)
chr1 (14-72)||(43809100-43809158)
chr1 (3-76)||(18033805-18033877)
chr1 (1-77)||(12124827-12124903)
chr1 (5-69)||(44182945-44183009)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-77)||(8337-8413)
[»] chr2 (30 HSPs)
chr2 (1-69)||(30264594-30264662)
chr2 (1-76)||(10812382-10812457)
chr2 (1-68)||(14308576-14308643)
chr2 (1-76)||(36375756-36375831)
chr2 (1-78)||(41885808-41885885)
chr2 (1-77)||(26342763-26342839)
chr2 (1-60)||(14295758-14295817)
chr2 (5-75)||(11560033-11560103)
chr2 (1-75)||(15182987-15183061)
chr2 (1-75)||(15893566-15893640)
chr2 (5-76)||(19594537-19594608)
chr2 (1-60)||(37093632-37093691)
chr2 (1-75)||(1259615-1259689)
chr2 (1-75)||(3363767-3363841)
chr2 (1-75)||(34399385-34399459)
chr2 (1-75)||(44360616-44360690)
chr2 (5-66)||(38186048-38186108)
chr2 (1-69)||(3376269-3376337)
chr2 (2-78)||(34357362-34357438)
chr2 (1-76)||(478958-479033)
chr2 (2-77)||(14284268-14284342)
chr2 (14-77)||(31011702-31011765)
chr2 (1-60)||(28145572-28145633)
chr2 (1-75)||(38072218-38072292)
chr2 (1-60)||(14288614-14288671)
chr2 (1-53)||(25558194-25558246)
chr2 (21-76)||(11222301-11222356)
chr2 (14-76)||(35158336-35158398)
chr2 (23-60)||(4883808-4883845)
chr2 (8-69)||(13965797-13965858)
[»] chr5 (39 HSPs)
chr5 (1-75)||(1087913-1087987)
chr5 (2-60)||(1297732-1297790)
chr5 (5-75)||(4098500-4098570)
chr5 (1-75)||(10889168-10889242)
chr5 (1-69)||(12665023-12665091)
chr5 (1-69)||(12869885-12869953)
chr5 (1-68)||(10359222-10359289)
chr5 (1-76)||(39073209-39073284)
chr5 (5-75)||(2673958-2674028)
chr5 (1-75)||(38910438-38910512)
chr5 (2-75)||(7404018-7404091)
chr5 (1-77)||(7579645-7579721)
chr5 (1-76)||(4175459-4175534)
chr5 (1-60)||(18020763-18020822)
chr5 (2-77)||(28446963-28447038)
chr5 (1-60)||(34261477-34261536)
chr5 (5-80)||(38017252-38017327)
chr5 (1-76)||(38702306-38702381)
chr5 (1-75)||(8825222-8825296)
chr5 (2-60)||(38363355-38363413)
chr5 (14-78)||(3686868-3686932)
chr5 (1-60)||(9076236-9076295)
chr5 (1-68)||(25027562-25027629)
chr5 (1-60)||(26854090-26854149)
chr5 (1-75)||(6072617-6072691)
chr5 (6-60)||(6754174-6754228)
chr5 (1-75)||(25344125-25344199)
chr5 (33-75)||(36239655-36239697)
chr5 (1-50)||(22582637-22582686)
chr5 (26-78)||(16124237-16124289)
chr5 (1-61)||(24074832-24074892)
chr5 (6-77)||(18794953-18795024)
chr5 (1-60)||(42911715-42911774)
chr5 (1-75)||(4985155-4985229)
chr5 (1-75)||(5842973-5843047)
chr5 (26-76)||(9127330-9127380)
chr5 (14-66)||(4688810-4688862)
chr5 (1-53)||(31546001-31546053)
chr5 (1-77)||(40198953-40199029)
[»] chr7 (23 HSPs)
chr7 (1-73)||(29497522-29497594)
chr7 (1-76)||(17896476-17896551)
chr7 (1-76)||(33099820-33099895)
chr7 (2-60)||(31430743-31430801)
chr7 (1-75)||(32528314-32528388)
chr7 (2-60)||(41891454-41891512)
chr7 (3-75)||(8265134-8265206)
chr7 (5-69)||(36922427-36922491)
chr7 (4-79)||(32966031-32966106)
chr7 (5-75)||(8382013-8382083)
chr7 (6-60)||(41675188-41675242)
chr7 (2-47)||(44480156-44480201)
chr7 (9-78)||(44820590-44820659)
chr7 (1-53)||(7312800-7312852)
chr7 (21-77)||(33921758-33921814)
chr7 (21-76)||(5732058-5732113)
chr7 (21-68)||(7477191-7477238)
chr7 (5-60)||(12838079-12838134)
chr7 (1-60)||(31398933-31398992)
chr7 (19-77)||(6799620-6799678)
chr7 (26-75)||(33174015-33174064)
chr7 (1-53)||(29722313-29722365)
chr7 (1-77)||(47408296-47408372)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-77)||(49329-49405)
scaffold0024 (8-60)||(89360-89412)
[»] scaffold0172 (1 HSPs)
scaffold0172 (5-60)||(26126-26181)
[»] scaffold0002 (2 HSPs)
scaffold0002 (6-60)||(138741-138795)
scaffold0002 (1-75)||(148486-148560)
[»] scaffold0040 (1 HSPs)
scaffold0040 (9-76)||(69290-69357)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-77)||(195569-195644)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-75)||(77271-77345)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-75)||(419476-419550)


Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 2 - 483
Target Start/End: Original strand, 43945563 - 43946045
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat-tttaagacactctttaataggaat 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||| |||||||||||    
T  43945563 tagtatcaattgttgattgtcttggtttatataaaatgtcaaaatgtgacaactaaaaaggaacggaggtagtatctttaagacactcgttaataggaat 43945662  T
Q  101 gagaataggtcatacctgcctacaaaatatacaacttagtttacgataaaccatattttttcttaaataaaga-gattaaatcnnnnnnnagaagtttat 199  Q
    ||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||| || || | ||||       ||||||||||    
T  43945663 gagaataggtcattccggcctacaaaatatacaacttagtttacaataaaccatattttatcttaaataaggaagacttaatctttttttagaagtttat 43945762  T
Q  200 ttaaccaaaaagaccacatcacgtgtcatcactggtggcggaactggggtggcaagg--aaaccaccgccaccccatctttattgnnnnnnnnnnnnnnn 297  Q
    |||||||||||||||| ||||||||||||||||||   |||||||||||||||||||  |||||||||||| |||||||||||||                   
T  43945763 ttaaccaaaaagaccatatcacgtgtcatcactgg---cggaactggggtggcaaggggaaaccaccgccaacccatctttattgttttttatatttttt 43945859  T
Q  298 nnatataccagaaagtggatcctgaaaaaggatccttgctgaatgctatttgctatctgcatccctgaaaccaaagtatatgcttccctgcgctatactg 397  Q
      |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43945860 ttatataccagaaagtggatgctgaaaaaggatccttgctgaatgctatttgctatttgcatccctgaaaccaaagtatatgcttccctgcgctatactg 43945959  T
Q  398 gtttatcataagctatattggttggtttatcttatgtgctatttactaattgcttccattatatttagattactagccttaattct 483  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  43945960 gtttatcataagctatattggttggtttatcttatgtgctatttgctaattgcttccattatatttagattactggccttaattct 43946045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 42671949 - 42671879
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||    
T  42671949 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaattaaaaaagaacggaggtagta 42671879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47069920 - 47069844
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||| |||||||  |||||||    
T  47069920 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtagtatt 47069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54898149 - 54898090
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  54898149 gtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 54898090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 19550433 - 19550488
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  19550433 tatcaattgttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaa 19550488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 29698175 - 29698242
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||  |||||||    
T  29698175 tagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 29698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41168941 - 41169000
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  41168941 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 41169000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34266503 - 34266429
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| | ||||||  ||||||| |||||    
T  34266503 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaaggaacggaggtagta 34266429  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 43554577 - 43554647
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  43554577 atcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagtat 43554647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 54106450 - 54106520
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||||| |||||||||||||||| |||| ||||||  ||||||| |||||    
T  54106450 tatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtaacaattaaaaaggaacggaggtagta 54106520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7329007 - 7329084
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||| ||||| |||||||||||||||| | |||||||| |||||||||||| |||||| ||| |||| ||||||||    
T  7329007 gtagtaacaattattgattgtcttagtttgtgtaaaatgttaaaatgtgacaattaaaaagaaatggaggtagtattt 7329084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53745345 - 53745268
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||  ||||||  ||||||||    
T  53745345 gtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagtattt 53745268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24981473 - 24981532
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||| ||||||||| |  |||||||||||||||||||| ||||||    
T  24981473 gtagtatcaattgttgattatcttagtttgtgcaaaatgtcaaaatgtgacaattaaaaa 24981532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 13168193 - 13168247
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||    
T  13168193 atcaattgttgattgtcttggtttgtataaaatgtaaaaatgtgacaattaaaaa 13168247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 29803832 - 29803905
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||| |||  | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  29803832 tagtatcaattgttgattgtcttggttcgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 29803905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6902461 - 6902537
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||| ||||| |||| | |||||| |||||||||||||  |||||| |||||| |||| ||||    
T  6902461 gtagtatcaattgttgatggtcttggtttgtgtaaaatatcaaaatgtgacagttaaaaagaaacggggataatatt 6902537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 52663625 - 52663693
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||||||||| ||||||||||| |||| | | |||||||||||| |||||| ||||||| |||||||    
T  52663625 gtagtatcaattattgattgtcttggtttgtgtgaaatgtcaaaatatgacaattaaaaatgaacggag 52663693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27992423 - 27992482
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||| || | || | ||||||||||||||||||||| ||||||    
T  27992423 gtagtatcaattgttgattgtattgggttgtgtaaaatgtcaaaatgtgacaattaaaaa 27992482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 45101410 - 45101347
Alignment:
Q  12 tgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  45101410 tgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 45101347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 51244808 - 51244875
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||||||||||||||||||||| |||| | |||||| ||||||| | |||| |||||| ||||||||    
T  51244808 tagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatattacaagtaaaaagaaacggag 51244875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 51697625 - 51697574
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    ||||||||||||||||||||||| |||| | |||||||||||||| ||||||    
T  51697625 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaa 51697574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13158502 - 13158428
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||| || |||||||| |||||| |||||||||||||| | |||| ||||||  ||||||| |||||    
T  13158502 gtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggaggtagta 13158428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29651851 - 29651925
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||| |||||||||| || |||| | |||||||| |||||||||||| ||||||  ||||||| |||||    
T  29651851 gtagtatcaactgttgattgttttggtttgtgtaaaatgtaaaaatgtgacaattaaaaaagaacggaggtagta 29651925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 33074328 - 33074266
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||| |||| | ||||||||||||||||||||| ||||||  |||| |||||||||    
T  33074328 ttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaaataaaaaggaacgtagatagtat 33074266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 33491182 - 33491128
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||| ||||||||||||||||||||| ||||||  ||||||| |||||    
T  33491182 tcttagtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 33491128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 51219146 - 51219080
Alignment:
Q  11 ttgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||| |||| | ||||||||||| ||||||||| ||||||  ||||||| |||||||    
T  51219146 ttgttgattgtcttggtttgtgtaaaatgtcaatatgtgacaattaaaaaggaacggaggtagtatt 51219080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 790733 - 790782
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtga 50  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||    
T  790733 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtga 790782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 29458253 - 29458188
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttt 79  Q
    ||||||||||| |||| | ||||||||||||||||||| | ||||||| |||  ||||||||||||    
T  29458253 ttgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaatgaacaaagatagtatttt 29458188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 32980830 - 32980882
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||| ||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  32980830 caattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 32980882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35315315 - 35315391
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||| |||||||||||||||||  ||| | |||||||||||||  |||||| ||||||  ||||||| |||||||    
T  35315315 gtagtaacaattgttgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggagttagtatt 35315391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27483851 - 27483792
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||| |  ||| |||||||||| ||||| |||||| ||||||    
T  27483851 gtagtatcaattgttgattgtcctgatttgtataaaatgttaaaatatgacaattaaaaa 27483792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 46973606 - 46973673
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    ||||||||||||||||||||  || |||| | |||||| ||||||||| |||| |||||| |||||||    
T  46973606 gtagtatcaattgttgattgctttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacgga 46973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 3376354 - 3376316
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgaca 52  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  3376354 ttgattatcttagtttatgtaaaatgtcaaaatgtgaca 3376316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32853423 - 32853349
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| || || |||||||||||||||| | ||||||||||||| || |||| ||||||  || ||||||||||    
T  32853423 gtagtaacatttattgattgtcttagtttgtgtaaaatgtcaaaaagttacaattaaaaaggaatggagatagta 32853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 40318978 - 40318916
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||| |||| |||| | |||||||| |||||||||||| ||||||| ||||||| ||||||    
T  40318978 ttgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaaatgaacggaggtagtat 40318916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 36234549 - 36234606
Alignment:
Q  3 agtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||| || |||||||||||| ||| | |||||| |||||||||||||| ||||||    
T  36234549 agtatcactttttgattgtcttaatttgtgtaaaatatcaaaatgtgacaattaaaaa 36234606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 41425825 - 41425886
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||| |||| | |||||||| |||||||||||| ||||||  ||||||| |||||    
T  41425825 ttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 41425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 52627268 - 52627227
Alignment:
Q  34 aaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| ||||||  |||||||||||||    
T  52627268 aaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 52627227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 39866905 - 39866853
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||| ||||||||||| |||| | ||||||||||||| ||||||| ||||||    
T  39866905 caattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaa 39866853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1252349 - 1252424
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  1252349 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgataattaaaaatgaacggagatagtat 1252424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17193341 - 17193415
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||  ||||||| |||||    
T  17193341 gtaggatcaattgttgattgtcttggtttatataaaatgtcaaaacgtgacaattaaaaaggaacggaggtagta 17193415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3621773 - 3621832
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  3621773 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 3621832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17124043 - 17123984
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  17124043 gtagtatcaattattgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaa 17123984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 364595 - 364525
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||| |||||| |||||||| ||||||    
T  364595 atcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaagaaacggaggtagtat 364525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 373906 - 373964
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaa 59  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||    
T  373906 gtagtatcaattgctgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaa 373964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3850503 - 3850577
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  3850503 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaagtaacggaggtagta 3850577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23923771 - 23923712
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| |  |||||||||||||||||||| ||||||    
T  23923771 gtagtatcaattgttgattgtcttggtttgtgcaaaatgtcaaaatgtgacaattaaaaa 23923712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 24663566 - 24663621
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  24663566 tatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 24663621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1751489 - 1751415
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||| ||||  ||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  1751489 gtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggaggtagta 1751415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22050231 - 22050305
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||||| ||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  22050231 gtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 22050305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 30388950 - 30389023
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| |||||||||||||||| |||| | |||||||||||||||||| || ||||||  ||||||| |||||    
T  30388950 tagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 30389023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53814 - 53882
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||| ||||| ||||||||||| || ||| |||||| |||||||||||||| |||||| ||||||||    
T  53814 gtagtaacaattattgattgtcttggtatatgtaaaatatcaaaatgtgacaattaaaaagaaacggag 53882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26470781 - 26470722
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||| ||||| ||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  26470781 gtagtaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaa 26470722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12732358 - 12732417
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||| ||||||||  ||| | |||||||| |||||||||||| ||||||    
T  12732358 gtagtatcaattgttaattgtcttgttttgtgtaaaatgttaaaatgtgacaattaaaaa 12732417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 17601178 - 17601127
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaac 65  Q
    |||||||||||||||| | ||||| ||||||||||||||| |||||| ||||    
T  17601178 ttgattgtcttagtttgtgtaaaacgtcaaaatgtgacaattaaaaagaaac 17601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17836076 - 17836135
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||| ||||||||||||||||||| |||| | |||||| |||| ||||||||| ||||||    
T  17836076 gtagaatcaattgttgattgtcttggtttgtgtaaaatatcaatatgtgacaattaaaaa 17836135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 1249735 - 1249781
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||| ||| || ||||||| ||||||    
T  1249735 ttgattgtcttagtttatataaaatatcataaagtgacaattaaaaa 1249781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 19645767 - 19645721
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  19645767 ttgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaa 19645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30416133 - 30416059
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||||| ||||||||||| |||||| ||||||||||| || ||| || ||||||  ||||||| |||||    
T  30416133 gtagtaacaattattgattgtcttggtttatgtaaaatgtcaacatatgataattaaaaaggaacggaggtagta 30416059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26485743 - 26485667
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||| || || |||| |||||| |||||| ||||||||||||| ||||||| ||||||  ||| ||| |||||||    
T  26485743 gtagtaacatttattgaatgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagtatt 26485667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22678367 - 22678293
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  22678367 gtagtatcaattgttgattatcttggtttatataaaatgtcaaaatgtgacaattaaaaatgaacggaggtagta 22678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44069217 - 44069291
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||| |||||||| |||||    
T  44069217 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagta 44069291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 16464839 - 16464762
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttt 79  Q
    ||||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  16464839 tagtatcaattgttgattgtctaggtttgtgtaaaatgtcaaaatgtgacaactaaaaaggaacggaggtagtatttt 16464762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 33755087 - 33755015
Alignment:
Q  3 agtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||  ||||||| |||||    
T  33755087 agtatcaattgttgattgtcttagtttatgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 33755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9834466 - 9834540
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  9834466 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 9834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44217892 - 44217966
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  44217892 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 44217966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5374408 - 5374340
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||| |||||| |||||| ||||||||    
T  5374408 gtagtatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaagaaacggag 5374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35231876 - 35231944
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||  |||||||    
T  35231876 gtagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 35231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 13629250 - 13629175
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||| ||| |||||||    
T  13629250 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagtatt 13629175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48782385 - 48782452
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||| ||||||    
T  48782385 gtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacgga 48782452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8735575 - 8735649
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  8735575 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 8735649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 35232354 - 35232297
Alignment:
Q  3 agtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  35232354 agtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 35232297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 44013970 - 44013897
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| |||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  44013970 tagtttcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 44013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46872107 - 46872159
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||||    
T  46872107 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaa 46872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 56576162 - 56576087
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||||||| |||| |||| | ||||| ||||||||||||||| ||||||  ||||||| ||||||    
T  56576162 gtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaacggaggtagtat 56576087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 21044804 - 21044727
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttta 80  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||| || ||||||  ||||||| ||||| ||||    
T  21044804 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataa-taaaaaggaacggaggtagtaattta 21044727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39683772 - 39683698
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | |||||||| ||||||||| || ||||||  ||||||| |||||    
T  39683772 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtgaaaatgtgataattaaaaaggaacggaggtagta 39683698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 53599840 - 53599770
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||| | |||||||| |||||||||||| ||||||  ||||||| |||||    
T  53599840 tatcaattgttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 53599770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22828459 - 22828382
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||| ||||| ||| ||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  22828459 gtagtagcaattattggttgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtattt 22828382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 33751388 - 33751327
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||| | |||||||||||||||| |||| ||||||  |||||||||||||    
T  33751388 ttgattgtcttagtttgtgtaaaatgtcaaaatgtaacaattaaaaaggaacggagatagta 33751327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 12252282 - 12252354
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||||||||||||  ||||| |||||||||||||| |||||  ||||||  ||||||| |||||||    
T  12252282 tatcaattgttgattgtcttgatttatgtaaaatgtcaaaatatgacagttaaaaaggaacggaggtagtatt 12252354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16664427 - 16664479
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||||||    
T  16664427 gtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaa 16664479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 50623599 - 50623674
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||| ||||||||||| |||| | |||||||| |||||||||||| |||||| |||||||  |||||||    
T  50623599 gtagtatcaatttttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaa-aaacggatgtagtatt 50623674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3436125 - 3436066
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||| |||||||||||||||| |||| | |||||||||||||||||| || ||||||    
T  3436125 gtagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaa 3436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19527278 - 19527219
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||| |||| |||| | ||||| ||||||||||||||| ||||||    
T  19527278 gtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaa 19527219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 26906443 - 26906380
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    ||||||||||||||||| ||||||| | |||||| ||||||| |||||| ||||||| ||||||    
T  26906443 tatcaattgttgattgttttagtttgtgtaaaatatcaaaatatgacaattaaaaatgaacgga 26906380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36408909 - 36408968
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||| |||| |||||||| |||| | ||||||||||||||||||||| ||||||    
T  36408909 gtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 36408968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36423075 - 36423134
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||| |||| |||||||| |||| | ||||||||||||||||||||| ||||||    
T  36423075 gtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 36423134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26620409 - 26620335
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||| |||| || |||| |  |||||||||||||||||||| ||||||  ||||||| |||||    
T  26620409 gtagtatcaattgttgtttgttttggtttgtgcaaaatgtcaaaatgtgacaattaaaaaggaacggagttagta 26620335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 39671515 - 39671585
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||| | |||||||||| |||||||||| |||| |  ||||||| |||||    
T  39671515 tatcaattgttgattgtcttggtttgtgtaaaatgtcataatgtgacaattaaataggaacggaggtagta 39671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 55703113 - 55703179
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagt 74  Q
    ||||| ||||||||||| || ||| |||||||||||||| |||||| ||||||  ||||||||||||    
T  55703113 caattattgattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaaggaacggagatagt 55703179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38617365 - 38617291
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||||  | |||| | |||||| |||||||||||||| ||||||  ||||||| |||||||    
T  38617365 gtagtatcaattgttgattgt--tggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtatt 38617291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19093211 - 19093143
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||| ||||| |||| | |||| |||||| ||||||||||||||||||||| ||||||  |||||||    
T  19093211 gtagtaacaattattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 19093143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29295540 - 29295604
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaac 65  Q
    |||||||||||| ||||||||||| |||| | |||||| ||||||||||| || |||||| ||||    
T  29295540 gtagtatcaattattgattgtcttggtttgtgtaaaatatcaaaatgtgataattaaaaaaaaac 29295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42513084 - 42513008
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaa-tgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||| ||||||||||||||||  ||| | |||||| |||||| |||||||| ||||||| ||||||| ||||||    
T  42513084 gtagtattaattgttgattgtcttgatttgtgtaaaatttcaaaaatgtgacaattaaaaatgaacggaggtagtat 42513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23237816 - 23237875
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||  |||||| | |||||||| ||||||| |||| ||||||    
T  23237816 gtagtatcaattgttgattgttctagtttgtgtaaaatgttaaaatgtaacaattaaaaa 23237875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 52257836 - 52257781
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||| ||||||||||||| ||||||||||||| ||||||  |||||| ||||||||    
T  52257836 ttgagtgtcttagtttatgtaaaatgtcaaaaagtgacagttaaaaagaaacggag 52257781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 52677224 - 52677165
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||| ||||||| |||||||| || |||| | ||||||||||||||||||||| ||||||    
T  52677224 gtagcatcaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 52677165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 354172 - 354226
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| |||||| ||||||||||||||||||||| ||||||  ||||||| |||||    
T  354172 tcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 354226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 29511249 - 29511303
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| |||||| ||||||||||||| ||||||| ||||||| ||||||| |||||    
T  29511249 tcttggtttatgtaaaatgtcaaaaggtgacaattaaaaatgaacggaggtagta 29511303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31862044 - 31861966
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttt 79  Q
    |||||| ||||| |||||| ||||||||| | |||||| ||||||  | |||| ||||||  |||||||||||||||||    
T  31862044 gtagtaacaattattgattatcttagtttgtgtaaaatttcaaaaaataacaattaaaaaggaacggagatagtatttt 31861966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42099894 - 42099968
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||||| ||||||||||| |||| | |  |||||||||||||||||| |||||| ||||| || |||||    
T  42099894 gtagtaacaattattgattgtcttggtttgtgtttaatgtcaaaatgtgacaattaaaaaaaaacgaaggtagta 42099968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37502208 - 37502260
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    |||||| || || ||||||||||| |||| ||||||||||||||| |||||||    
T  37502208 gtagtaacatttattgattgtcttggtttgtataaaatgtcaaaaagtgacaa 37502260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 42645454 - 42645506
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||| |||||| ||||||| ||| |||||||||||||||||| || ||||||    
T  42645454 caattattgattatcttagtatatgtaaaatgtcaaaatgtgataattaaaaa 42645506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13328153 - 13328227
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||  |||||||||||||    
T  13328153 gtagtatcaatttttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 13328227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14228379 - 14228305
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||| ||||||| |||||    
T  14228379 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacggaggtagta 14228305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38128604 - 38128529
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||  ||||||| ||||||    
T  38128604 gtagtatcaattgttgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagtat 38128529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 35052237 - 35052310
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  35052237 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 35052310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38482849 - 38482774
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| ||||||    
T  38482849 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtat 38482774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 14263731 - 14263801
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  14263731 tatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggagttagta 14263801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 16656884 - 16656950
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    |||||||||||||||| |||||| |||| | ||||||||||||||||||||| |||||| |||||||    
T  16656884 tagtatcaattgttgagtgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacgga 16656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4057471 - 4057530
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||| |||||||| |||| | ||||||||||||||||||||| ||||||    
T  4057471 gtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 4057530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25703635 - 25703560
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||| ||||||||||| ||||  ||| | ||||||||||||||||||||| |||||| |||||||| ||||||    
T  25703635 gtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagtat 25703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25812806 - 25812731
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||| ||||||||||| ||||  ||| | ||||||||||||||||||||| |||||| |||||||| ||||||    
T  25812806 gtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagtat 25812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33935117 - 33935058
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| ||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  33935117 gtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 33935058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8453293 - 8453219
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||||| |||||| ||||||||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  8453293 gtagtaacaattattgattatcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 8453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 40228479 - 40228537
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||| |||| | ||||| ||||||||||||||| ||||||    
T  40228479 tagtatcaattgttgattgtcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaa 40228537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39303573 - 39303496
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgac-aactaaaaataaacggagatagtatt 77  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| || ||||||  ||||||| |||||||    
T  39303573 gtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaaattaaaaaggaacggaggtagtatt 39303496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 15596534 - 15596606
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttta 80  Q
    ||||| |||||| |||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  15596534 caattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatttta 15596606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 9954836 - 9954891
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||| |||||| |||||||| ||||| |||||| ||||||    
T  9954836 tatcaattgttgattgtcttggtttatgtaaaatgttaaaatatgacaattaaaaa 9954891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11994064 - 11994123
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||| ||||||||  ||| | ||||||||||||||||||||| ||||||    
T  11994064 gtagtatcaattgtttattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 11994123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 21651783 - 21651728
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||| |||||| ||||||||||||||||||||| |||||| |||||||| ||||||    
T  21651783 tcttggtttatgtaaaatgtcaaaatgtgacaattaaaaagaaacggagttagtat 21651728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23848613 - 23848554
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| ||||||||||| |||| | | ||||||||||||||||||| ||||||    
T  23848613 gtagtatcaattattgattgtcttggtttgtgtcaaatgtcaaaatgtgacaattaaaaa 23848554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26062890 - 26062949
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||| ||||  ||| | ||||||||||||||||||||| ||||||    
T  26062890 gtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 26062949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41308079 - 41308154
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||| ||||| || |||||||| || ||| |||||||||||||| |||||| |||||| |||||||| ||||||    
T  41308079 gtagtaacaattattaattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaagaaacggaggtagtat 41308154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43642046 - 43641987
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||| ||||| |||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  43642046 gtagtaacaattattgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaa 43641987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45281435 - 45281360
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||||||| |||| |||| | |||||||| |||||||||||| |||||   ||||||| ||||||    
T  45281435 gtagtatcaattgttgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaagggaacggagctagtat 45281360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 1202500 - 1202442
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||  ||| | |||||||| |||||||||||| ||||||    
T  1202500 tagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacaattaaaaa 1202442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 34047035 - 34047093
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||  |||| |||| | ||||||||||||||||||||| ||||||    
T  34047035 tagtatcaattgttgatattcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 34047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34982012 - 34982086
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||| ||||||||||||| || |||| | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  34982012 gtagtattaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 34982086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 2888512 - 2888448
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    ||||||||||| |||| | |||||||| |||||||||||| ||||||  ||||||| ||||||||    
T  2888512 ttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtattt 2888448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 11707503 - 11707443
Alignment:
Q  9 aattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||| |||||||||||| ||||| |||||||| ||||| |||||| |||||| ||||||||    
T  11707503 aattattgattgtcttaatttatgtaaaatgtaaaaatatgacaattaaaaagaaacggag 11707443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1245495 - 1245554
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||| ||||| |||||||||||  ||||| ||||||||||||| ||||||| ||||||    
T  1245495 gtagtaacaattattgattgtcttgatttatgtaaaatgtcaaaaagtgacaattaaaaa 1245554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23430092 - 23430151
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||  ||| | |||||||| |||||||||| | ||||||    
T  23430092 gtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacgattaaaaa 23430151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 3720876 - 3720938
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||| ||||||| | |||||||| |||| ||||||| ||||||  ||||||||||||||    
T  3720876 ttgattgttttagtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggagatagtat 3720938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 14061193 - 14061127
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttta 80  Q
    ||||||||||| |||| | |||||||| |||| ||||||| ||||||  ||||||| ||||||||||    
T  14061193 ttgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagtatttta 14061127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 18291678 - 18291722
Alignment:
Q  33 taaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||||    
T  18291678 taaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 18291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 36058441 - 36058489
Alignment:
Q  27 tttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||| ||||||||||||||| ||||| ||||||  |||||||||||||    
T  36058441 tttatgtaaaatgtcaaaatgcgacaattaaaaaggaacggagatagta 36058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 39615494 - 39615446
Alignment:
Q  17 attgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaac 65  Q
    |||||||| |||||| |||||| |||||||||||||| |||||| ||||    
T  39615494 attgtcttggtttatgtaaaatatcaaaatgtgacaattaaaaagaaac 39615446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12231125 - 12231051
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||  ||||||| |||||    
T  12231125 gtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 12231051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35531349 - 35531272
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  35531349 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtattt 35531272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 37609356 - 37609284
Alignment:
Q  3 agtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||  |||||||||||||    
T  37609356 agtatcaattgttgattgtcttgatttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 37609284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8464311 - 8464252
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  8464311 gtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 8464252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45226631 - 45226572
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  45226631 gtagtatcaattgttgattgtcttaatttgtataaaatgtcaaaatgtgacaattaaaaa 45226572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13566862 - 13566936
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  13566862 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 13566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43500689 - 43500763
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  43500689 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 43500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20605678 - 20605601
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| |||||| ||||||| || |||| ||||||||    
T  20605678 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaatgaatggaggtagtattt 20605601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 38648641 - 38648714
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||  ||| | ||||||||||||||||||||| |||||| |||||||| |||||    
T  38648641 tagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagta 38648714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7783133 - 7783192
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||| ||||||    
T  7783133 gtagtatcaattgttgattatcttggtttgtataaaatgtcaaaatgtgacaattaaaaa 7783192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 49908233 - 49908174
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||    
T  49908233 gtagtatcaattgttgattgtcttagttcgtataaaatgtcaaaatgtgataattaaaaa 49908174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 29830940 - 29831013
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||||| ||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  29830940 tatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtattt 29831013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30686594 - 30686670
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||||||| |||| | |||||| |||||| ||||||| ||||||  ||||||| |||||||    
T  30686594 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaacgtgacaattaaaaaggaacggaggtagtatt 30686670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19349433 - 19349374
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| | |||||||||| |||||||||| ||||||    
T  19349433 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcagaatgtgacaattaaaaa 19349374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28679204 - 28679263
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||| || ||||||    
T  28679204 gtagtataaattgttaattgtcttaatttatataaaatgtcaaaatgtgataattaaaaa 28679263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 40926807 - 40926732
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||| ||||| |||||||| || |||||| ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  40926807 gtagtaacaattattgattgtattggtttatgtaaaatgtcaaaatgtgacaattaaaaaagaacggaggtagtat 40926732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1024739 - 1024813
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||| || |||| | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  1024739 gtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 1024813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13507953 - 13508027
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||| |||||||||||  ||||| |||||||||||||||||| || ||||||  ||||||| |||||    
T  13507953 gtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 13508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13515141 - 13515215
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||| |||||||||||  ||||| |||||||||||||||||| || ||||||  ||||||| |||||    
T  13515141 gtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 13515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21927750 - 21927693
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||||||| | |||||||||  |||||||||| ||||||    
T  21927750 gtagtatcaattgttgattgtcttagtttgtgtaaaatgtc--aatgtgacaattaaaaa 21927693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1429467 - 1429526
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||| |||| |||||||||||||| | |||||| |||||||||||||| ||||||    
T  1429467 gtagtatcatttgtagattgtcttagtttgtgtaaaatatcaaaatgtgacaattaaaaa 1429526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1677381 - 1677440
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| |||||||||||  ||| | ||||||||||||||||||||| ||||||    
T  1677381 gtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 1677440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45368271 - 45368330
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||| || |||| | ||||||||||||||| ||||| ||||||    
T  45368271 gtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgcgacaattaaaaa 45368330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 48508341 - 48508392
Alignment:
Q  26 gtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||| ||||||||||||||||||||||| |||||| |||||| |||||||||    
T  48508341 gtttgtataaaatgtcaaaatgtgacaattaaaaagaaacggtgatagtatt 48508392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 49497339 - 49497394
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||| |||| ||||||    
T  49497339 tatcaattgttaattgtcttagtttgtataaaatatcaaaatgtaacaattaaaaa 49497394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 35483831 - 35483761
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||| || |||| | |||||||||||||| |||||| ||||||  ||||||| |||||    
T  35483831 tatcaattgttgattgttttggtttgtgtaaaatgtcaaaatatgacaattaaaaaagaacggaggtagta 35483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 35255676 - 35255728
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||| ||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  35255676 caattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaa 35255728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 37437104 - 37437048
Alignment:
Q  4 gtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||| ||||||||||| |||| | |||||||||||||| |||||| ||||||    
T  37437104 gtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaa 37437048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 48264810 - 48264754
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||| |||| ||||||| ||||||||||||||| |||||| |||||||| |||||||    
T  48264810 tcttggtttgtataaaacgtcaaaatgtgacaattaaaaagaaacggaggtagtatt 48264754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 31487820 - 31487765
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||||||||| |||| | ||||||||||||||||||||| ||||||  |||||||    
T  31487820 ttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 31487765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 50825616 - 50825553
Alignment:
Q  12 tgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||| |||| |  |||||||||||| ||||||| |||||| |||||||| |||||    
T  50825616 tgttgattgtcttggtttgtgaaaaatgtcaaaaagtgacaattaaaaaaaaacggaggtagta 50825553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 13699377 - 13699435
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttt 79  Q
    |||| |||||| |||||||||||||| || ||| ||||||  |||||||||||||||||    
T  13699377 tcttggtttatgtaaaatgtcaaaatatggcaattaaaaaggaacggagatagtatttt 13699435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 43809100 - 43809158
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagata 72  Q
    |||||||||||| ||||| |||||||| |||| ||||||| ||||||  ||||||||||    
T  43809100 ttgattgtcttaatttatgtaaaatgttaaaaagtgacaattaaaaaggaacggagata 43809158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 18033877 - 18033805
Alignment:
Q  3 agtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||| ||||   |||||||  |||||||||||| ||||||  ||||||| ||||||    
T  18033877 agtatcaattgttgattgtcttggtttgcgtaaaatg-aaaaatgtgacaattaaaaaggaacggaggtagtat 18033805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12124827 - 12124903
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||| |||||||||||||| ||||  ||| | ||||||| ||||||||||||| ||||||  |||| || |||||||    
T  12124827 gtagcatcaattgttgattatcttgatttgtgtaaaatggcaaaatgtgacaattaaaaaggaacgaaggtagtatt 12124903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 44182945 - 44183009
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||||| ||||||||||| |||| | |||||||  |||||||||||| ||||||  |||||||    
T  44182945 tatcaatttttgattgtcttggtttgtgtaaaatgctaaaatgtgacaattaaaaaggaacggag 44183009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8337 - 8413
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||||    
T  8337 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30264662 - 30264594
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||  |||||||    
T  30264662 gtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 30264594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10812382 - 10812457
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  10812382 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 10812457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14308576 - 14308643
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||| |||||||    
T  14308576 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacgga 14308643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36375756 - 36375831
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  36375756 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 36375831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41885808 - 41885885
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||||  |||||  ||||||| ||||||||    
T  41885808 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatgaaaaaggaacggaggtagtattt 41885885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26342763 - 26342839
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||||||| |||| | ||||||||||||| ||||||| ||||||  ||||||| |||||||    
T  26342763 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaacgtgacaattaaaaaggaacggaggtagtatt 26342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14295817 - 14295758
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  14295817 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 14295758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 11560103 - 11560033
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| || ||||||  ||| |||||||||    
T  11560103 tatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgataattaaaaagtaacagagatagta 11560033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15183061 - 15182987
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  15183061 gtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 15182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15893640 - 15893566
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  15893640 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 15893566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 19594537 - 19594608
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  19594537 tatcaattgttgattatctttgtttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagtat 19594608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37093632 - 37093691
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||| |||||||| |||| | ||||||||||||||||||||| ||||||    
T  37093632 gtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 37093691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1259689 - 1259615
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||| |||| |||| | |||||| ||||||||| |||| |||||| |||||||| |||||    
T  1259689 gtagtatcaattgttgattctcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggaggtagta 1259615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3363767 - 3363841
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||| ||||||||||| |||| | ||||||||||||||| ||||| ||||||  ||||||| |||||    
T  3363767 gtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgcgacaattaaaaaggaacggaggtagta 3363841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34399385 - 34399459
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | |||| ||||||||||||| || ||||||  ||||||| |||||    
T  34399385 gtagtatcaattgttgattgtcttggtttgtgtaaagtgtcaaaatgtgataattaaaaaggaacggaggtagta 34399459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44360616 - 44360690
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||||| ||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  44360616 gtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 44360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 38186108 - 38186048
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacg 66  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||| |||||    
T  38186108 tatcaattgttgattgtcttagtttgtgtaaaatatcaaaatgtgacaa-taaaaagaaacg 38186048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3376337 - 3376269
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||||||||| |||||||||||  ||| | ||||||||||||||||||||| ||||||  |||||||    
T  3376337 gtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 3376269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 34357362 - 34357438
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||| ||||||||||| |||| |||| | ||||||||| ||||||||||| ||||||  ||||||| ||||||||    
T  34357362 tagtataaattgttgattatcttggtttgtgtaaaatgtcgaaatgtgacaattaaaaaggaacggaggtagtattt 34357438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 479033 - 478958
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||| |||||| |||| |||| | |||||||| |||||||||||| ||||||  ||| ||||||||||    
T  479033 gtagtatcaattattgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaagaacagagatagtat 478958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 14284268 - 14284342
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||||||||||||||| |||| | | ||||||||||||||||||| ||||||  ||| ||| |||||||    
T  14284268 tagtatcaattgttgattgtcttggtttgtgt-aaatgtcaaaatgtgacaattaaaaaagaactgaggtagtatt 14284342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 31011765 - 31011702
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||| |||| |||||||||||||||||| |||| ||||||  ||||||| |||||||    
T  31011765 ttgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagtatt 31011702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28145633 - 28145572
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatat--aaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||||  |||||||  ||||| |||||||||||||| ||||||    
T  28145633 gtagtatcaattgttgattgtcttgatttatataaaaaatatcaaaatgtgacaattaaaaa 28145572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38072292 - 38072218
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||| || |||| | |||||||| ||||| |||||| ||||||  ||||||| |||||    
T  38072292 gtagtatcaattgttgattgttttggtttgtgtaaaatgttaaaatatgacaaataaaaaggaacggaggtagta 38072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14288614 - 14288671
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| |||||||||||  ||| |||||||| |||||||||||||| ||||||    
T  14288614 gtagtatcaattattgattgtctt--tttgtataaaatatcaaaatgtgacaattaaaaa 14288671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25558246 - 25558194
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    |||||||||||| ||||||||||| |||| | |||||||||||||||| ||||    
T  25558246 gtagtatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgtaacaa 25558194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 11222356 - 11222301
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||| |||||| ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  11222356 tcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 11222301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 35158398 - 35158336
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||| |||||| ||| || ||||||||||||| ||||||| |||||| |||||||| ||||||    
T  35158398 ttgaatgtcttggttcatgtaaaatgtcaaaaagtgacaattaaaaagaaacggaggtagtat 35158336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 4883808 - 4883845
Alignment:
Q  23 ttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  4883808 ttagtttatgtaaaatgtcaaaatgtgacaattaaaaa 4883845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 13965797 - 13965858
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||| ||||||||||| |||| | ||||||||||||| ||||||| ||||||  |||||||    
T  13965797 caattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 13965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1087987 - 1087913
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||||| |||| | |||||||| |||||||||||| |||||| |||||||| |||||    
T  1087987 gtagtatcaattgttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagta 1087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 1297790 - 1297732
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  1297790 tagtattaattgttgattgtcttagtttatataaaatgtcaaaatgtaacaattaaaaa 1297732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 4098500 - 4098570
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||| ||||||||||| |||| | ||||||||||||||||||||| |||||| ||||||||||||||    
T  4098500 tatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggagatagta 4098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10889242 - 10889168
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| ||||||||||||||||||| |||||| |||||||| |||||||||||| |||||| |||||||| |||||    
T  10889242 gtaggatcaattgttgattgtcttggtttatgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagta 10889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12665023 - 12665091
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||||  |||||||    
T  12665023 gtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacggag 12665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12869953 - 12869885
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||||||||||||||||| |||| |||| |||||||| |||||||||||||| ||||||| |||||||    
T  12869953 gtagtatcaattgttgattatcttggtttgtataaaatatcaaaatgtgacaattaaaaatgaacggag 12869885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10359289 - 10359222
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    ||||||||||||||||||||| || |||| | ||||||||||||||||||||| |||||| |||||||    
T  10359289 gtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacgga 10359222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39073209 - 39073284
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| ||||||    
T  39073209 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtat 39073284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 2674028 - 2673958
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  2674028 tatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 2673958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 38910438 - 38910512
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  38910438 gtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 38910512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 7404018 - 7404091
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||| |||| |||||| |||||| |||||||||||||| ||||||  |||||| ||||||    
T  7404018 tagtatcaattgttgattatcttggtttatgtaaaatatcaaaatgtgacaattaaaaaggaacggaaatagta 7404091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7579721 - 7579645
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||||||||||||| || |||| | |||||| |||||||||||||| ||||||  ||||||| |||||||    
T  7579721 gtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtatt 7579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4175534 - 4175459
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||| ||||||||  ||| | ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  4175534 gtagtatcaattgtttattgtcttgctttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 4175459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18020822 - 18020763
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| || | | ||||||||||||||||||||| ||||||    
T  18020822 gtagtatcaattgttgattgtcttggtctgtgtaaaatgtcaaaatgtgacaattaaaaa 18020763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 28447038 - 28446963
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||| ||||| |||||| |||| |||| | ||||||||||||| ||||||| |||||| ||||||||||||||||    
T  28447038 tagtaacaattattgattatcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaagaaacggagatagtatt 28446963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34261477 - 34261536
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| |||||| ||||||    
T  34261477 gtagtatcaattgttgattgtcttggtttgtctaaaatgtcaaaatatgacaattaaaaa 34261536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 38017327 - 38017252
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttta 80  Q
    |||||||||||||||||||| |||| | |||||||| |||||||||||| ||||||  |||| || ||||||||||    
T  38017327 tatcaattgttgattgtcttcgtttgtgtaaaatgttaaaatgtgacaattaaaaaagaacgaaggtagtatttta 38017252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38702306 - 38702381
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||||| |||||| | ||||| |||||| ||||||  |||| |||||||||    
T  38702306 gtagtatcaattgttgattgtcttggtttatgtaaaatattaaaatatgacaattaaaaaggaacgaagatagtat 38702381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8825222 - 8825296
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||| || ||||||  ||||||| |||||    
T  8825222 gtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 8825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 38363355 - 38363413
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||| |||| | |||||||||||| |||||||| ||||||    
T  38363355 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattgtgacaattaaaaa 38363413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 3686868 - 3686932
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||||| || |||||||||||| |||||||||||| || |||||||||| |||| ||||||||    
T  3686868 ttgattgttttggtttatataaaacgtcaaaatgtgataattaaaaataaatggaggtagtattt 3686932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9076236 - 9076295
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||||||| |||| | |||||||||||| | |||||| ||||||    
T  9076236 gtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattatgacaattaaaaa 9076295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25027629 - 25027562
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    |||||| || || |||||||||||||||||| |||||||||| || ||||||| |||||| |||||||    
T  25027629 gtagtaacatttattgattgtcttagtttatgtaaaatgtcacaaagtgacaattaaaaagaaacgga 25027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26854149 - 26854090
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| |||||| |||| |||| | ||||||||||||||||||||| ||||||    
T  26854149 gtagtatcaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 26854090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6072617 - 6072691
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||||| ||| | ||||||||  |||||||| || ||||||  ||||||| |||||    
T  6072617 gtagtatcaattgttgattgtcttaatttgtgtaaaatgtttaaatgtgataattaaaaaggaacggaggtagta 6072691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 6754228 - 6754174
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||| ||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  6754228 atcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 6754174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25344125 - 25344199
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| |||||||||||||||||||  ||| | ||||||| ||||||||||||| ||||||  ||||||| |||||    
T  25344125 gtaggatcaattgttgattgtcttgatttgtgtaaaatgacaaaatgtgacaattaaaaaggaacggaggtagta 25344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 36239655 - 36239697
Alignment:
Q  33 taaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  36239655 taaaatgtcaaaatgtgacaattaaaaatgaacggagatagta 36239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22582637 - 22582686
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtga 50  Q
    ||||||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  22582637 gtagtataaattgttgattgtcttgatttgtataaaatgtcaaaatgtga 22582686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 16124289 - 16124237
Alignment:
Q  26 gtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  16124289 gtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtattt 16124237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24074892 - 24074832
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaat 61  Q
    |||||| ||||| |||||||| || |||| | ||||||||||||||||||||| |||||||    
T  24074892 gtagtaacaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaat 24074832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 18794953 - 18795024
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||  ||| | |||||||||||| ||||| || ||||||  ||||||| |||||||    
T  18794953 atcaattgttgattgtcttgatttgtgtaaaatgtcaaagtgtgaaaattaaaaaggaacggaggtagtatt 18795024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42911715 - 42911774
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||| ||||| ||||||||||| |||| | |||||| |||||||||||||| ||||||    
T  42911715 gtagtaacaattattgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 42911774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4985229 - 4985155
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||| | ||||||||||| || | | ||||||||||||||||||||| ||||||  ||||||| |||||    
T  4985229 gtagtaacaactattgattgtcttggtatgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 4985155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5843047 - 5842973
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| || || ||||||||||| |||||| ||||||||||||| |||| || ||||||  |||||| ||||||    
T  5843047 gtagtaacatttattgattgtcttggtttatgtaaaatgtcaaaaagtgataattaaaaaggaacggatatagta 5842973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 9127380 - 9127330
Alignment:
Q  26 gtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  9127380 gtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 9127330  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 4688862 - 4688810
Alignment:
Q  14 ttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacg 66  Q
    |||||||||||  |||||  |||||||||||||||||||| |||||| |||||    
T  4688862 ttgattgtcttgatttatggaaaatgtcaaaatgtgacaattaaaaagaaacg 4688810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31546053 - 31546001
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    |||||| ||||| ||||||||||| |||| | ||||||||||||| |||||||    
T  31546053 gtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaaggtgacaa 31546001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40198953 - 40199029
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||| |||||||||||||||||  | | | |||||| |||||| || |||| ||||||  |||||||||||||||    
T  40198953 gtagtaacaattgttgattgtcttgatctgtgtaaaatatcaaaaagtaacaattaaaaaagaacggagatagtatt 40199029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29497594 - 29497522
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatag 73  Q
    |||||||||||||||||||||| | |||| | |||||||||||||||||| || |||||| ||||||||||||    
T  29497594 gtagtatcaattgttgattgtcctggtttgtgtaaaatgtcaaaatgtgataattaaaaagaaacggagatag 29497522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17896551 - 17896476
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  17896551 gtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 17896476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33099895 - 33099820
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| ||||||    
T  33099895 gtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaagaacggaggtagtat 33099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 31430743 - 31430801
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  31430743 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 31430801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32528388 - 32528314
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||| |||||||||||||||||||  ||| |||||||||||||||| |||||| ||||||| ||||||| |||||    
T  32528388 gtagcatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaatgaacggaggtagta 32528314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 41891454 - 41891512
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  41891454 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 41891512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 8265134 - 8265206
Alignment:
Q  3 agtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||||||| ||||||  ||||||| |||||    
T  8265134 agtatcaattgttgattgtcttggtttgtgtaaaatttcaaaatgtgacaattaaaaaagaacggaggtagta 8265206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 36922427 - 36922491
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggag 69  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||  |||||||    
T  36922427 tatcaattgttgattgtcttgatttatttaaaatgtcaaaatgtgacaattaaaaaggaacggag 36922491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 32966106 - 32966031
Alignment:
Q  4 gtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatttt 79  Q
    |||||||||||||||||||||| ||| | |||||||| |||||||||||| ||||||  ||||||| || ||||||    
T  32966106 gtatcaattgttgattgtcttaatttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtaatatttt 32966031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 8382013 - 8382083
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||||||||||| |||| | |||||||||||||||||| || ||||||  ||||||| |||||    
T  8382013 tatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 8382083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 41675242 - 41675188
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  41675242 atcaattattgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaa 41675188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 44480201 - 44480156
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatg 47  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||    
T  44480201 tagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatg 44480156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 44820659 - 44820590
Alignment:
Q  9 aattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtattt 78  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||  ||||||| ||||||| || |||||    
T  44820659 aattattgattgtcttggtttgtataaaatgtcaaaatatgacagttaaaaatgaacggaggtaatattt 44820590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7312800 - 7312852
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    ||||||||||||||||||||||||  ||| | |||||| ||||||||||||||    
T  7312800 gtagtatcaattgttgattgtcttgatttgtgtaaaatatcaaaatgtgacaa 7312852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 33921814 - 33921758
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||| |||||||| |||||||||||| ||||||  ||||||| |||||||    
T  33921814 tcttagtttatgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtatt 33921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 5732113 - 5732058
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||| |||||| ||||||||||||||||||||| ||||||  ||||||| ||||||    
T  5732113 tcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 5732058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 7477238 - 7477191
Alignment:
Q  21 tcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacgga 68  Q
    ||||||||||| |||||||||||||||| |||| |||||| |||||||    
T  7477238 tcttagtttatgtaaaatgtcaaaatgtaacaattaaaaagaaacgga 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 12838134 - 12838079
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||| ||||||||||| |||| | |||||| |||||||||||||| ||||||    
T  12838134 tatcaatttttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaa 12838079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31398992 - 31398933
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||| || |||||||| |||||| |||||||  |||||||||||| ||||||    
T  31398992 gtagtatcaatttttaattgtcttggtttatgtaaaatgctaaaatgtgacaattaaaaa 31398933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 6799620 - 6799678
Alignment:
Q  19 tgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||| |||||| ||||||||||| ||||||||| ||||||  ||||||| |||||||    
T  6799620 tgtcttggtttatgtaaaatgtcaacatgtgacaattaaaaaggaacggaggtagtatt 6799678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 33174015 - 33174064
Alignment:
Q  26 gtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||| |||||    
T  33174015 gtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 33174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29722365 - 29722313
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaa 53  Q
    |||||||| ||||||||||||||| ||||   |||||||| ||||||||||||    
T  29722365 gtagtatcgattgttgattgtcttggtttgcgtaaaatgttaaaatgtgacaa 29722313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47408296 - 47408372
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||| || || |||| |||||| |||| | ||||||||||||| ||||||| ||||||  ||||||| |||||||    
T  47408296 gtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagtatt 47408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49329 - 49405
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    |||||||||||||||||||||||| ||||   ||||||||||||||||||||| ||||||  ||||||  |||||||    
T  49329 gtagtatcaattgttgattgtcttggtttgcgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagtatt 49405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 89360 - 89412
Alignment:
Q  8 caattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||  ||| | ||||||||||||||||||||| ||||||    
T  89360 caattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 89412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 26181 - 26126
Alignment:
Q  5 tatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||||| ||||||    
T  26181 tatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaaa 26126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 138795 - 138741
Alignment:
Q  6 atcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaa 60  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||    
T  138795 atcaattgttgattgtcttggtttgtataaaatgtaaaaatgtgacaattaaaaa 138741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 148486 - 148560
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||||||||| || |||||||| |||||| |||||||||||||| | |||| ||||||  ||||||| |||||    
T  148486 gtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggaggtagta 148560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 69290 - 69357
Alignment:
Q  9 aattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtat 76  Q
    |||||||||||||||| |||| | ||||||||||||||||||||| | ||||  ||||||| ||||||    
T  69290 aattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattgaaaaggaacggaggtagtat 69357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 195644 - 195569
Alignment:
Q  2 tagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagtatt 77  Q
    ||||||||||||| |||| |||| |||| | ||||||||||||||||||||| ||||||  ||||||  |||||||    
T  195644 tagtatcaattgtcgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggaactagtatt 195569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 77271 - 77345
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    ||||||||||||||||||||||||  ||| | |||||||| |||||||||||| ||| ||  ||||||| |||||    
T  77271 gtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacaattaagaaggaacggaggtagta 77345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 419550 - 419476
Alignment:
Q  1 gtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaactaaaaataaacggagatagta 75  Q
    |||||| || || ||||||||||| |||||| |||||||||| || ||||||| |||||| |||| ||| |||||    
T  419550 gtagtaacatttattgattgtcttggtttatgtaaaatgtcacaaagtgacaattaaaaagaaacagaggtagta 419476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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