View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5837_low_4 (Length: 407)

Name: NF5837_low_4
Description: NF5837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5837_low_4
NF5837_low_4
[»] chr8 (20 HSPs)
chr8 (14-391)||(468043-468421)
chr8 (101-164)||(24184582-24184645)
chr8 (104-169)||(30157746-30157811)
chr8 (101-164)||(44362291-44362354)
chr8 (101-163)||(13015424-13015486)
chr8 (101-166)||(27924481-27924546)
chr8 (101-173)||(4366319-4366391)
chr8 (105-168)||(18087247-18087309)
chr8 (101-163)||(16938900-16938962)
chr8 (102-164)||(42563193-42563255)
chr8 (111-164)||(26491455-26491508)
chr8 (107-164)||(40891899-40891956)
chr8 (104-163)||(8457553-8457612)
chr8 (101-164)||(33986859-33986922)
chr8 (111-154)||(37940455-37940498)
chr8 (101-164)||(41013246-41013309)
chr8 (101-164)||(34127660-34127724)
chr8 (103-164)||(7662309-7662370)
chr8 (104-193)||(10457311-10457400)
chr8 (108-164)||(44801472-44801528)
[»] chr7 (6 HSPs)
chr7 (101-168)||(40417686-40417753)
chr7 (101-192)||(6221095-6221187)
chr7 (101-164)||(45879114-45879177)
chr7 (101-173)||(9047088-9047160)
chr7 (101-168)||(30898096-30898163)
chr7 (104-164)||(30198320-30198380)
[»] chr4 (21 HSPs)
chr4 (102-164)||(12763427-12763489)
chr4 (104-192)||(36619931-36620019)
chr4 (107-164)||(34015725-34015782)
chr4 (101-166)||(19466030-19466095)
chr4 (107-164)||(36860295-36860352)
chr4 (104-168)||(53374997-53375061)
chr4 (101-164)||(1955291-1955354)
chr4 (104-168)||(21139319-21139383)
chr4 (101-164)||(32056311-32056374)
chr4 (101-160)||(42915746-42915805)
chr4 (101-164)||(47742791-47742854)
chr4 (101-164)||(48743466-48743529)
chr4 (101-164)||(50498876-50498939)
chr4 (101-163)||(49081302-49081364)
chr4 (107-164)||(20922693-20922750)
chr4 (111-168)||(26194536-26194593)
chr4 (117-158)||(33033260-33033301)
chr4 (106-164)||(41736700-41736760)
chr4 (107-164)||(47089212-47089269)
chr4 (101-164)||(10215784-10215847)
chr4 (101-137)||(26206122-26206157)
[»] chr2 (9 HSPs)
chr2 (101-173)||(8329643-8329715)
chr2 (101-157)||(33635700-33635756)
chr2 (101-164)||(45716497-45716560)
chr2 (101-168)||(36100999-36101062)
chr2 (101-154)||(7820037-7820090)
chr2 (103-195)||(20493664-20493755)
chr2 (101-135)||(25749700-25749734)
chr2 (101-192)||(9620633-9620725)
chr2 (104-164)||(28580428-28580488)
[»] chr1 (10 HSPs)
chr1 (101-173)||(963946-964018)
chr1 (107-164)||(43638397-43638454)
chr1 (101-154)||(14171826-14171879)
chr1 (101-140)||(26127286-26127325)
chr1 (101-168)||(35538952-35539019)
chr1 (101-164)||(6395466-6395529)
chr1 (101-164)||(35285474-35285537)
chr1 (101-164)||(49066001-49066063)
chr1 (107-173)||(31647626-31647692)
chr1 (107-163)||(49372562-49372617)
[»] scaffold0007 (1 HSPs)
scaffold0007 (107-164)||(185503-185560)
[»] chr5 (13 HSPs)
chr5 (101-166)||(14148320-14148385)
chr5 (104-162)||(19366809-19366867)
chr5 (101-163)||(36301222-36301284)
chr5 (111-164)||(26296444-26296497)
chr5 (101-166)||(26440083-26440148)
chr5 (109-164)||(24181454-24181509)
chr5 (101-154)||(8590126-8590179)
chr5 (101-149)||(932131-932179)
chr5 (101-173)||(19336832-19336903)
chr5 (104-166)||(41868833-41868895)
chr5 (107-164)||(29144379-29144436)
chr5 (111-163)||(5412009-5412061)
chr5 (111-163)||(5471543-5471595)
[»] chr3 (17 HSPs)
chr3 (101-163)||(9099175-9099237)
chr3 (101-163)||(23086444-23086506)
chr3 (102-158)||(40892801-40892857)
chr3 (101-164)||(38832957-38833020)
chr3 (101-164)||(55142343-55142406)
chr3 (101-163)||(23089299-23089361)
chr3 (101-166)||(51490211-51490276)
chr3 (105-164)||(50662482-50662541)
chr3 (114-168)||(49980311-49980365)
chr3 (104-168)||(32497834-32497898)
chr3 (101-192)||(52762926-52763018)
chr3 (104-167)||(27659760-27659823)
chr3 (101-164)||(53653115-53653177)
chr3 (107-164)||(31064577-31064634)
chr3 (107-163)||(23160672-23160728)
chr3 (101-141)||(29793450-29793490)
chr3 (104-160)||(39149138-39149194)
[»] chr6 (6 HSPs)
chr6 (115-164)||(2667086-2667135)
chr6 (115-173)||(2656422-2656480)
chr6 (111-173)||(12109336-12109398)
chr6 (101-163)||(31330522-31330584)
chr6 (101-168)||(29608447-29608514)
chr6 (101-168)||(646596-646665)
[»] scaffold1095 (1 HSPs)
scaffold1095 (101-163)||(920-982)
[»] scaffold0275 (1 HSPs)
scaffold0275 (101-163)||(377-439)
[»] scaffold0191 (1 HSPs)
scaffold0191 (102-143)||(4564-4605)


Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 14 - 391
Target Start/End: Original strand, 468043 - 468421
Alignment:
Q  14 gggtatataaaacttaaagggtcttgtccgtgccccggagcactagctaaggtgctaaaagtagaaagaaaggtacaattta-cattatttaactttcaa 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  468043 gggtatgtaaaacttaaagggtcttgtccgtgccccggagcactagttaatgtgctaaaagtagaaagaaaggtacaattttgcattatttaactttcaa 468142  T
Q  113 aaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttcccaagacactcgttaacatttttcaaacttaaaagagacac 212  Q
    ||||||||||| ||||||| ||||||||||| || ||||||||||  ||||||||||| || |||||||||||||| ||||||||||||||| || ||||    
T  468143 aaagtagaatagacaattttcaaaacaatattttattttataattttttaacaagttttccgagacactcgttaacttttttcaaacttaaatgaaacac 468242  T
Q  213 ctaacttcaaatagatggagtaataaaagttgtctccccgcccatcattaataacgttggcaccactaggaggtagacagaaaaatgtctaatcgaatta 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  468243 ctaacttcaaatagatggagtaataaaagttgtctccccgcccatcattaataacgttggcaccactaggaggtagacagaaaaatgtctaatcgaatta 468342  T
Q  313 attatatgtatttactgtttcttcaatttcagatacaagcaatgttatcttgagaaatactaacgtgtaatctcaaagc 391  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  468343 attatatgtatttattgtttcttcaatttcagatacaagcaatgttatcttgagaaatgctaatgtgtaatctcaaagc 468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 24184582 - 24184645
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||    
T  24184582 tttaattttcaaaaagcagaatacacaatttccaaaacaaaattttcttttataattctttaac 24184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 30157746 - 30157811
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtt 169  Q
    |||||||||||||||||||||||||||||||| | ||||| | ||||||  |||||||||||||||    
T  30157746 aactttcaaaaagtagaatacacaatttccaagaaaatatttccttttacgattccttaacaagtt 30157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 44362354 - 44362291
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| |  |||||||||||||||||    
T  44362354 tttaactttcaaaaaatagaatacacaattttcaatacaatatttctttttataattccttaac 44362291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 13015424 - 13015486
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||| | ||||||||||| |||||    
T  13015424 tttaattttcaaaaagtagaatacacaatttgcaatacaatatttacttttataatttcttaa 13015486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 27924546 - 27924481
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaa 166  Q
    ||||||||||||||||||||||||| ||||| ||| | ||||| ||||||| |||||| |||||||    
T  27924546 tttaactttcaaaaagtagaatacataattttcaagataatattttcttttctaattctttaacaa 27924481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 4366319 - 4366391
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    ||||||||| ||||||||||||||| ||||| ||||| ||||| |  |||||| |||||||||||||| ||||    
T  4366319 tttaacttttaaaaagtagaatacataattttcaaaataatatttcattttatgattccttaacaagtatccc 4366391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 18087247 - 18087309
Alignment:
Q  105 actttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||||||||||||||||||||||| ||| | ||||| | ||||||| ||||||||||||||    
T  18087247 actttcaaaaagtagaatacacaattttcaagagaatatttccttttat-attccttaacaagt 18087309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 16938962 - 16938900
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||| ||||||||||||||||||||| ||| ||| ||| | || ||||||||||||||    
T  16938962 tttaactttaaaaaagtagaatacacaattttcaagacactatttcctcttataattccttaa 16938900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 42563255 - 42563193
Alignment:
Q  102 ttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||||| |||||| || ||||| ||| ||||||| | ||||||||||||||||||    
T  42563255 ttaactttcaaaaaatagaatgcagaattttcaatacaatatttccttttataattccttaac 42563193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 26491508 - 26491455
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||| ||||||||||||| ||||||| | |||||||||||| |||||    
T  26491508 aaaaagtagaacacacaatttccaatacaatatttccttttataattctttaac 26491455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 40891956 - 40891899
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| || |||||||||||  ||||| ||||| ||||||||||||||||||||    
T  40891956 tttcaaaaaataaaatacacaattatcaaaaaaatattttcttttataattccttaac 40891899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 8457553 - 8457612
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    |||||| ||||| ||||||||||||||||||| | ||||| | ||||| |||||||||||    
T  8457553 aacttttaaaaaatagaatacacaatttccaagaaaatatttccttttctaattccttaa 8457612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 33986922 - 33986859
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||||||||| ||||||||||||  || | ||||| |||||||||| | |||||||    
T  33986922 tttaactttcaaaaagtaaaatacacaattttaaagagaatattttcttttatattcccttaac 33986859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 37940498 - 37940455
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttata 154  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||    
T  37940498 aaaaagtagaatacacaatttccaagataatattttcttttata 37940455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 41013309 - 41013246
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||| ||| |||||||||||||| ||| |||| || ||||||  ||||||||||||    
T  41013309 tttaactttcaagaagaagaatacacaattttcaagacaaaattttctttattaattccttaac 41013246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 34127724 - 34127660
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatatt--cttttataattccttaac 164  Q
    ||||||||| ||||| ||||||||||||||||||| | ||||||||  ||||| ||||||||||||    
T  34127724 tttaacttttaaaaaatagaatacacaatttccaaga-aatatatttccttttctaattccttaac 34127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 7662309 - 7662370
Alignment:
Q  103 taactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||| ||||  ||||||||||||||||||||| ||||| | |||| |||||| ||||||    
T  7662309 taacttttaaaatatagaatacacaatttccaaaaaaatatttcctttaataatttcttaac 7662370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 10457311 - 10457400
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttcccaagacactcgttaacatttt 193  Q
    ||||||||||||||| ||| |||||||||||||| ||||| |  ||||||| |  ||||||||||  ||| | ||| | |||||||||||    
T  10457311 aactttcaaaaagtataatgcacaatttccaaaataatatttcattttatattcacttaacaagtgccccgaaacatttgttaacatttt 10457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 44801528 - 44801472
Alignment:
Q  108 ttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| ||||| ||||||||| || |||| || | ||||||||||||||||||    
T  44801528 ttcaaaaagcagaatgcacaatttctaagacaaaatttccttttataattccttaac 44801472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 40417686 - 40417753
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40417686 tttaactttcaaaaaatagaaaacacaatttccaaaacaatattttcttttataattccttaacaagt 40417753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 6221095 - 6221187
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttcccaaga-cactcgttaacattt 192  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |||  ||| ||| |||| ||||||||||    
T  6221095 tttaactttcaaaaagtagaatatacaatttccaagacaatatctccttttataattccttaaccagtgccccgagagcactagttaacattt 6221187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 45879177 - 45879114
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||| |||||||||||||||||||||||||||||| |||| || | ||||||||||||||||||    
T  45879177 tttacctttcaaaaagtagaatacacaatttccaagacaaaatttccttttataattccttaac 45879114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 9047160 - 9047088
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    |||||||||||||||||||||| |||||||| ||| |||| || | ||||||| |||||||||| ||| ||||    
T  9047160 tttaactttcaaaaagtagaatccacaattttcaatacaaaatttccttttatgattccttaaccagtgtccc 9047088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 30898096 - 30898163
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||||||||||||||||||  ||| ||| ||| | ||||| | ||||||||||||||||||||||    
T  30898096 tttaactttcaaaaagtagaatgtacagttttcaagaaaatatttccttttataattccttaacaagt 30898163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 30198380 - 30198320
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||| ||||| |||||||||||||||| || | ||||| | ||||| ||||||||||||    
T  30198380 aacttttaaaaaatagaatacacaatttctaagaaaatatttccttttctaattccttaac 30198320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 12763427 - 12763489
Alignment:
Q  102 ttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  12763427 ttaactttcaaaaagtagaatacacagtttccaaaacaatattttcttttataattccttaac 12763489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 36619931 - 36620019
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttcccaagacactcgttaacattt 192  Q
    |||||| |||||||| |||||||||||||||| ||||||| | |||||||||| |||||||||||  |||  |||||| ||||||||||    
T  36619931 aacttttaaaaagtaaaatacacaatttccaatacaatatttccttttataatcccttaacaagtgcccccggacacttgttaacattt 36620019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 34015782 - 34015725
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||||||| |||||    
T  34015782 tttcaaaaagtagaatatacaatttccaaaacaaaattttcttttataattctttaac 34015725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 19466095 - 19466030
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaa 166  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| |  ||||||| |||||||||||    
T  19466095 tttaactttcaaaaggtaaaatacacaatttccaaaaaaatatttcattttatatttccttaacaa 19466030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 36860352 - 36860295
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||||||||||||| ||||||| |  |||||||||| ||||||    
T  36860352 tttcaaaaagtagaatacacaatttccaatacaatatttctttttataatttcttaac 36860295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 53374997 - 53375061
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    |||||| ||||||||||||||||||||||||| | ||||| | |||||||| | |||||||||||    
T  53374997 aacttttaaaaagtagaatacacaatttccaagagaatatttccttttatattcccttaacaagt 53375061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 1955354 - 1955291
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| ||||||| ||||| ||||||| ||| ||||||| |||||||||||||| |||||    
T  1955354 tttaactttaaaaaagtcgaatatacaattttcaatacaatattttcttttataattctttaac 1955291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 21139319 - 21139383
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    |||||||||||||||||||||| ||||| ||| | ||| | |||||||||||||  |||||||||    
T  21139319 aactttcaaaaagtagaatacataattttcaagataatgttttcttttataatttattaacaagt 21139383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 32056311 - 32056374
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| |||||||| |||||||||||| ||| |||| || | ||||||||||| ||||||    
T  32056311 tttaacttttaaaaagtaaaatacacaattttcaagacaaaatttccttttataatttcttaac 32056374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 42915805 - 42915746
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattcct 160  Q
    ||||| ||| |||||||| |||||||||||||||||| || || ||||||| ||||||||    
T  42915805 tttaagttttaaaaagtaaaatacacaatttccaaaaaaacattttcttttgtaattcct 42915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 47742791 - 47742854
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| |||| ||| ||||||||| |||||| | ||||| | ||||||||||||||||||    
T  47742791 tttaacttttaaaatgtataatacacaaattccaagataatatttccttttataattccttaac 47742854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 48743529 - 48743466
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||| |||||||||||  ||| |||||||||||| ||||||| | ||||||||||| ||||||    
T  48743529 tttaattttcaaaaagtgaaatgcacaatttccaatacaatatttccttttataatttcttaac 48743466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 50498939 - 50498876
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| ||||| || |||||||||||||||||| ||||| || |||| |||||| |||||    
T  50498939 tttaactttaaaaaaataaaatacacaatttccaaaaaaatattttattttttaattctttaac 50498876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 49081302 - 49081364
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||| ||||| ||||||||||||||| ||||| ||||| | ||||| |||||| ||||    
T  49081302 tttaacttttaaaaaatagaatacacaattttcaaaaaaatatttccttttctaattctttaa 49081364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 20922750 - 20922693
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||| ||||||| |||| ||||||||||| | || || ||||||||||||||||||||    
T  20922750 tttcgaaaagtaaaatatacaatttccaagaaaacattttcttttataattccttaac 20922693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 26194593 - 26194536
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||| ||||||||||||| ||| | ||||| |  |||||||||||||||||||||    
T  26194593 aaaaagttgaatacacaatttacaagataatatttcattttataattccttaacaagt 26194536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 33033260 - 33033301
Alignment:
Q  117 tagaatacacaatttccaaaacaatatattcttttataattc 158  Q
    ||||||||||||||||||| | ||||| ||||||||||||||    
T  33033260 tagaatacacaatttccaagaaaatattttcttttataattc 33033301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 41736760 - 41736700
Alignment:
Q  106 ctttcaaaaagtagaatacacaatttccaaaacaatatatt--cttttataattccttaac 164  Q
    ||||||||||||| |||||| |||||| |||| ||||||||  |||||| |||||||||||    
T  41736760 ctttcaaaaagtacaatacagaatttctaaaaaaatatatttccttttacaattccttaac 41736700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 47089269 - 47089212
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||| |||||||||||| ||| | || || | ||||||||||||||||||    
T  47089269 tttcaaaaagtaaaatacacaattttcaagaaaacatttccttttataattccttaac 47089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 10215784 - 10215847
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatata-ttcttttataattccttaac 164  Q
    ||||| ||||||||| || |||||||||||||||||| | |||| ||||||||||||| ||||||    
T  10215784 tttaaatttcaaaaaataaaatacacaatttccaaaa-attatatttcttttataatttcttaac 10215847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 26206122 - 26206157
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaa 137  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26206122 tttaactttcaaaa-gtagaatacacaatttccaaaa 26206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 8329715 - 8329643
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| | ||| |||||||||||||||||| ||||    
T  8329715 tttaactttcaaaaagtagaatacataatttccaaaataatatttccttatataattccttaacaagtatccc 8329643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 33635756 - 33635700
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataatt 157  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33635756 tttaacttttaaaaagtagaatacacaatttccaagacaatattttcttttataatt 33635700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 45716497 - 45716560
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||||||||||||| || ||||||||| ||||||| | ||||||||||||||||||    
T  45716497 tttaactttcaaaaagtagaatccataatttccaagacaatatttccttttataattccttaac 45716560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 36101062 - 36100999
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    |||||||||||||||||||||||||    |||||| ||||||| | ||||||||||| ||||||||||    
T  36101062 tttaactttcaaaaagtagaataca----ttccaagacaatatttccttttataatttcttaacaagt 36100999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 7820090 - 7820037
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttata 154  Q
    ||||||||||||||||||||||| |||||||| || ||||||| | ||||||||    
T  7820090 tttaactttcaaaaagtagaatatacaatttcgaagacaatatttccttttata 7820037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 20493664 - 20493755
Alignment:
Q  103 taactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt-ttcccaagacactcgttaacatttttc 195  Q
    |||||||||||||||||||  ||||| |||  | ||||||| | |||||||||||| |||||||||  ||| | | ||||||||||||||||||    
T  20493664 taactttcaaaaagtagaa--cacaaattctcatacaatatttccttttataattcgttaacaagtgctccaagggcactcgttaacatttttc 20493755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 25749734 - 25749700
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaa 135  Q
    ||||||||||||||| |||||||||||||||||||    
T  25749734 tttaactttcaaaaaatagaatacacaatttccaa 25749700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 9620633 - 9620725
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttcccaaga-cactcgttaacattt 192  Q
    ||||| ||| ||||||||||||| |||||||  ||||  |||| |  ||||||||||||||||||||| |||  ||| |||| ||||||||||    
T  9620633 tttaatttttaaaaagtagaatatacaatttttaaaaatatatttctttttataattccttaacaagtgtcctgagagcacttgttaacattt 9620725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 28580428 - 28580488
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||| ||||| || ||||||||||||| | || ||||| |||||||||||||| |||||    
T  28580428 aacttttaaaaaataaaatacacaatttctataaaaatattttcttttataattctttaac 28580488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 964018 - 963946
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| | || ||||||||||||||||||| ||||    
T  964018 tttaactttgaaaaagtagaatacacaatttccaagacaatatttcctattataattccttaacaagtgtccc 963946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 43638397 - 43638454
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||    
T  43638397 tttcaaaaagtagaatacacaattttcaagacaatatttccttttataattccttaac 43638454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 14171879 - 14171826
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttata 154  Q
    |||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||    
T  14171879 tttaactttcaaaaagtaaaatacacaattttcaagacaatattttcttttata 14171826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 26127325 - 26127286
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaa 140  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  26127325 tttaactttcaaaaagtagaatacacaatttccaagacaa 26127286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 35539019 - 35538952
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||||| ||||| || |||||||| ||||||||||||||| |  |||||||||| ||||||||||    
T  35539019 tttaacttttaaaaaataaaatacacagtttccaaaacaatatttcattttataatttcttaacaagt 35538952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 6395529 - 6395466
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| ||||  || |||||||||||| ||||| ||||| |||||| |||||||||||||    
T  6395529 tttaacttttaaaacataaaatacacaattttcaaaaaaatattttctttaataattccttaac 6395466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 35285537 - 35285474
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| ||||| || ||||||||||||| || ||||||| || ||||||| |||||||||    
T  35285537 tttaacttttaaaaaataaaatacacaatttctaatacaatattttattttatatttccttaac 35285474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 49066001 - 49066063
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| |||||| | |||||||||||||||||| || || ||||||||||||| ||||||    
T  49066001 tttaacttttaaaaagaaaaatacacaatttccaaaataa-attttcttttataatttcttaac 49066063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 31647692 - 31647626
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    |||||||||||| |||||| ||||| | ||| || || |||||||||||||||||||| ||| ||||    
T  31647692 tttcaaaaagtaaaatacagaattttcgaaaaaacattttcttttataattccttaactagtgtccc 31647626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 49372562 - 49372617
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||| || ||||| |||||| ||||| ||||| |||||||||||||||||||    
T  49372562 tttcaaaaaataaaatacccaattttcaaaa-aatattttcttttataattccttaa 49372617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 185503 - 185560
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  185503 tttcaaaaagtagaatacacaattttcaatacaatattttcttttataattccttaac 185560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 14148320 - 14148385
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaa 166  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |  |||||||||||||||||||    
T  14148320 tttaactttcaaaaagtagaatacacaatttccaagataatatgtctttttataattccttaacaa 14148385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 19366809 - 19366867
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattcctta 162  Q
    |||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||    
T  19366809 aactttcaaaaagtagaatacacaatttccaagacaatgtttccttttataattcctta 19366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 36301284 - 36301222
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||| |||| ||| ||||||||||||| |||| ||||| |||||||||||||||||||    
T  36301284 tttaacttttaaaatgtaaaatacacaatttctaaaataatattttcttttataattccttaa 36301222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 26296444 - 26296497
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||| |||||    
T  26296444 aaaaagtagaatacacaatttccaatacaatatttccttttataattctttaac 26296497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 26440148 - 26440083
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaa 166  Q
    ||||||||| |||||||||||||||||||||| ||||  |||| |  |||||||||||||||||||    
T  26440148 tttaacttttaaaaagtagaatacacaatttctaaaaagatatttcattttataattccttaacaa 26440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 24181509 - 24181454
Alignment:
Q  109 tcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||| |||||||||||| ||| ||||||| | ||||||||||||||||||    
T  24181509 tcaaaaagtaaaatacacaattttcaatacaatatttccttttataattccttaac 24181454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 8590179 - 8590126
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttata 154  Q
    ||||||||| |||| ||| |||||||||||||||||| ||||| ||||||||||    
T  8590179 tttaacttttaaaaggtaaaatacacaatttccaaaaaaatattttcttttata 8590126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 932179 - 932131
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattctt 149  Q
    ||||||||| |||||||| |||||||||||||||| ||||||| |||||    
T  932179 tttaactttaaaaaagtaaaatacacaatttccaatacaatattttctt 932131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 19336832 - 19336903
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    |||||||||||||||||||||||||||||||  || | ||||| |  |||||||||| |||||||||| ||||    
T  19336832 tttaactttcaaaaagtagaatacacaatttttaagaaaatat-tcattttataatttcttaacaagtgtccc 19336903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 41868833 - 41868895
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaa 166  Q
    |||||| |||||||| ||||||||||||| || | ||||| | |||||||||||||| |||||    
T  41868833 aacttttaaaaagtaaaatacacaatttctaagataatatttccttttataattcctaaacaa 41868895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 29144379 - 29144436
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||| ||| || |||||||||||||||||| ||||| | ||||||||||| ||||||    
T  29144379 tttcagaaaataaaatacacaatttccaaaaaaatatttccttttataatttcttaac 29144436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 5412009 - 5412061
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    |||||||| |||||||||||| | ||| ||||| |||||||| ||||||||||    
T  5412009 aaaaagtaaaatacacaattttcgaaaaaatattttcttttagaattccttaa 5412061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 5471543 - 5471595
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    |||||||||||||||||||||  || | ||||| |||||||||||||| ||||    
T  5471543 aaaaagtagaatacacaatttttaagataatattttcttttataattctttaa 5471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 9099175 - 9099237
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||||||||||| |||||||| |||||||| ||||||| | |||||||||||||||||    
T  9099175 tttaactttcaaaaagttgaatacacgatttccaatacaatatttccttttataattccttaa 9099237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 23086506 - 23086444
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||| |||||||| ||||||||||||| |||||||||| || ||||||||||||||||    
T  23086506 tttaacttttaaaaagtataatacacaatttctaaaacaatatttttttttataattccttaa 23086444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 40892857 - 40892801
Alignment:
Q  102 ttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattc 158  Q
    |||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||    
T  40892857 ttaactttcaaaaagtagaatacacaatttccaagaaaatatttccttttataattc 40892801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 38833020 - 38832957
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||| | ||||||||||| ||||||    
T  38833020 tttaactttcaaaaagtagaatacataattttcaatacaatatttccttttataatttcttaac 38832957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 55142343 - 55142406
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  55142343 tttaaatttcaaaacatagaatacacaatttccaaaaaaatattttcttttataattctttaac 55142406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 23089299 - 23089361
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||| |||||||| ||||||||||||| ||||||| || |||||||||||||| ||||    
T  23089299 tttaacttttaaaaagtataatacacaatttctaaaacaaaattttcttttataattctttaa 23089361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 51490211 - 51490276
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaa 166  Q
    |||||||||||||| ||| |||||| ||||| ||| | ||||| ||||||||||||||||||||||    
T  51490211 tttaactttcaaaaggtataatacaaaattttcaagagaatattttcttttataattccttaacaa 51490276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 50662482 - 50662541
Alignment:
Q  105 actttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||| | ||||||||| | ||||| || |||||||||||||||||    
T  50662482 actttcaaaaagtagaatagaaaatttccaatataatattttattttataattccttaac 50662541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 49980365 - 49980311
Alignment:
Q  114 aagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    |||||||||||||||||||||| | ||||| | |||| |||||||||||||||||    
T  49980365 aagtagaatacacaatttccaagataatatttcctttcataattccttaacaagt 49980311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 32497834 - 32497898
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||||||||||| |||||||||||| | | | ||||| | ||||||||||| ||||||||||    
T  32497834 aactttcaaaaagtataatacacaattttcgagataatatttacttttataatttcttaacaagt 32497898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 52763018 - 52762926
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa-caagtttcccaagacactcgttaacattt 192  Q
    |||||||||||| |||||||||||| ||||||| | |||| || |  |||||||| ||||||| ||||| ||| | |||||| ||||||||||    
T  52763018 tttaactttcaagaagtagaatacataatttccgacacaaaatttctttttataactccttaaccaagtgtccgaggacactggttaacattt 52762926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 27659760 - 27659823
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaag 167  Q
    |||||||||||| ||||||||||||||| ||||| | ||| |  ||||||||||| ||||||||    
T  27659760 aactttcaaaaaatagaatacacaattttcaaaaaattatttcattttataattcattaacaag 27659823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 53653177 - 53653115
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||| ||||||||||||||||||||| ||| | || || |||||||||||||| |||||    
T  53653177 tttaacttt-aaaaagtagaatacacaattttcaatataaaattttcttttataattctttaac 53653115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 31064577 - 31064634
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    |||||||||||| |||||||||||| ||||| ||| | |  |||||||||||||||||    
T  31064577 tttcaaaaagtaaaatacacaattttcaaaaaaatgtttctttttataattccttaac 31064634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 23160672 - 23160728
Alignment:
Q  107 tttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    |||||||||||| |||| ||||||||| | |  |||| |||||||||||||||||||    
T  23160672 tttcaaaaagtaaaatatacaatttccgagaacatattttcttttataattccttaa 23160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 29793490 - 29793450
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaat 141  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  29793490 tttaacttttaaaaagtaaaatacacaatttccaagacaat 29793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 39149194 - 39149138
Alignment:
Q  104 aactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattcct 160  Q
    |||||| ||||| |||||||||||||||| |||| || | |||||||| ||||||||    
T  39149194 aacttttaaaaaatagaatacacaatttctaaaaaaaaaaattcttttctaattcct 39149138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 2667135 - 2667086
Alignment:
Q  115 agtagaatacacaatttccaaaacaatatattcttttataattccttaac 164  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2667135 agtagaatacacaatttccaatacaatattttcttttataattccttaac 2667086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 2656480 - 2656422
Alignment:
Q  115 agtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||||| ||| ||||    
T  2656480 agtagaatacacaatttccaatataatattttcttttataattccttaaccagtgtccc 2656422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 12109336 - 12109398
Alignment:
Q  111 aaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagtttccc 173  Q
    ||||||| |||||  |||||||||||| ||||| ||||||||||||| |||||||||| ||||    
T  12109336 aaaaagttgaatagccaatttccaaaaaaatattttcttttataatttcttaacaagtgtccc 12109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 31330584 - 31330522
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||||||||||||||||||||||||| ||| |||| || | || ||||||||| ||||    
T  31330584 tttaactttcaaaaagtagaatacacaattttcaagacaaaatttcctcttataattctttaa 31330522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 29608514 - 29608447
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaacaagt 168  Q
    ||||||||| ||||| ||||||||| |||||||||||  |||| | ||||| ||||| ||||||||||    
T  29608514 tttaacttttaaaaaatagaatacataatttccaaaaatatatttccttttttaatttcttaacaagt 29608447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 646596 - 646665
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttcc--aaaacaatatattcttttataattccttaacaagt 168  Q
    ||||| |||||||||||||||| | ||||||||  |||| ||||| |||||||||||||  |||||||||    
T  646596 tttaattttcaaaaagtagaatgcgcaatttccagaaaaaaatattttcttttataattttttaacaagt 646665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 920 - 982
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||||||| |||||| ||||| |||| |||||||| || | |||||||||||||||||    
T  920 tttaactttcaaacagtagactacaccattttcaaaacaaaatttccttttataattccttaa 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 439 - 377
Alignment:
Q  101 tttaactttcaaaaagtagaatacacaatttccaaaacaatatattcttttataattccttaa 163  Q
    ||||||||||||| |||||| |||||| ||| |||||||| || ||||||||||||| |||||    
T  439 tttaactttcaaacagtagactacacagttttcaaaacaaaattttcttttataatttcttaa 377  T

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Target: scaffold0191 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 4605 - 4564
Alignment:
Q  102 ttaactttcaaaaagtagaatacacaatttccaaaacaatat 143  Q
    |||||||||||||||| ||||||||||||| ||| |||||||    
T  4605 ttaactttcaaaaagtggaatacacaattttcaatacaatat 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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